CmoCh10G001240 (gene) Cucurbita moschata (Rifu) v1
Overview
Sequences
The following sequences are available for this feature:
Legend: exonfive_prime_UTRCDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below.GATATGTTGTGTAATAAACTTTGTATTTGACCTAATTTAGAAGAAAGAAATTTATCCACACAAGGGGAAAGAGAATGAAGGAGTCCCATCGAGGATAGGCGACTAGAGATGGAAATAAGACGGTCAAAAATACATATTCTTCCATTCACCCGCCGTTTGAGGCTACCAATTCCAATAGACACACCGAAGGAGGCGGCTGCGCCTCTGTTGCTATATTGTTTTTCCCGTTTCCAAAACCCATTCTCCAAGAATCATCCAATTCTTCTACTTTCCCTTCATTTTGTTACTTTCTACAGGATTTTCGTCGTGCGTATTGATGAAATGTACTTCGAATCCAACGAGCTCTCATTGGACTTCATCGAAATGGATTACTAGAGTCAGTACTGGAGTTGGGTGCTAATTCTTTCTCTTTCTCGGACATGTCTGTTAAATTTGCTTCTCTTTCTTGTTCGGTTCCTTCTCCATCTTCACCCTCTGGCGCCCGGAGAAGCTCACAGGTGCTTTTTGGTTCTCTATTCGCTTTCTCATGCGTTCATGCTTTCTCTGAAAGTTAATTTGTTCTATAAATTCATGTTTCAACATTGCTGCCGTGGAGTATGAAAGCTAGTTGGTACGCTGTGGGTTGAAATGTATTTCGAAGCAAACACAAACTGGGCTTAGAGAAAAAAGCTTTGGTAAATTTAATGTAGTAGTAAGCAAACACCAGATAGGCTTTGGATTGTGCACAGGCGGCCTCTGCTGATTTTGAATTAATTACGTATTGAGTGTTTGTCTACAATGATTTCTCATTCTGTTATCTTTATTGAGAGCCTTGCTATCTGTAGTAACCTTTTGCTTTGAGATCTACTGACTAGTAAGATGGTTCTAACATGATAATCTTTTGATATTAAAATTGTTGTTGTCTCTTTGTGCTATCTCATCTAAAAATGTTCATTATTTTCTTCAAGACATCATTTGATTTAATGGACTCTGTGTTCTTATTTTGATTTCCAGCTGGGCTTTTCGCAAGCGTTGTATGGCATTGGCAGCCAGCAACGTAGTTTCCAGAGGTTAACGTTTGCTAAGGGTAGGACTATCTTTTATTCATTATAACATGCCATTTACTATTTACCTTCAACCTCAGGCTGTTTGTTTATATTCAAAATGGCTATAAAATGGGTTTATCTGGTTTCTAGACTTCTCATAACCACCATATCTATGGCTTAGTGAGATTCCTATTGTGACTTATTTCCCAAAATGTCTATTTTGTTCAAATCCAATGCCGAATGTTGTTTTTTAAACTACTAAACATTATGTTCTTGGTTCGCTTTTGTAATTGTGGATAGCTGAATCGTTCAAGTTAATGTATGGATTGCTGAGAAGATTTCCAAGGAGGCAAAATATTCTCTCTGCTATTTCAGAGGACCAGTCTCAATGCAGTGAGCAGGGTGAGCTAGAGCAGATAGATCAGCATCCCACTGATGAGGATATCTCCCTCGAAAACAACTCATTTTTACACTCTGACGAGTGTACTGGTGGGAAACCGGGTTTCATCTCGTTTTACAACCATTCTAAAGAAGGTTACCAGACTCGTCTGTCAAGCGTGCAAAGCAATCAACACAAATTCTTATGGTTTGTTGGTCCAGCTGTCCTCGTAGCTTCGTTCATTTTCCCCTCACTTTATCTACGGAAACTACTTTCAAATATTTTCGAGGACTCTCTGTTGACAGGTCAGTACAGTTTCTTATTTATATATATTGAGTAATATTGGCTGTGTGTATGCCCCTTATCAGCAAGAACAATGAAAGCCAAAGGAGACATTCTAGATTGACCATCTATATATGGCTTTTTATTGATATTGTGTAAAAGGGCCATTAAGGTCAGATGTTTTAAAAACCATTCATTCTTCAAGAACATTTAAGACAAAGGATATTATAGTAAGCAGTGCTCTTAGATCTCTAAGGAGTTCTGTAATTTCTTTACAAGTTCCATGTTCTGTTGAATGTTTACTTTAGAGCCTTTGACTCTGTTGGAAATTTTTAGTTGACATTTGAAATTCTCTATTGTAAACTGCGAACTATCTCCTGATTGCAGACTTCCTTATATTGTTCTTCACGGAAGCACTGTTCTATTGTGGCGTTGCGGTGTTTCTTTTTTTAATAGACCGTTCAAGAAGGCCTACTGAACCCGATACTGTGAGAAACAGTTATCAAACCCTGTCTAATCAATTTGGACAGCGGATCTCTTCTGTAGCTGCCTTAGCACTCAGTTTAATAATACCTATGGTCACTATGGGGTTAGTGTGGCCATGGACAGGCCCTGCAGCATCTGCCACACTTGCACCTTACCTTGTTGGCATCGTTGTCCAATTTGCATTTGAACAATACGCCCGGCGCAAGGAATCGCCTTCATGGCCTGTTATTCCAATTGTCTTTCAAGTAAGAATGTTCATAGATTATCATTCTCCCTCTACATCTTTTGTTGCCTATCACCTCCTTGCTGGATTTGCTTCATTTAGTTATTCTATGCAAAAATTTGTATATTAGTGTATCATTTCTGGTGACTATTTCCCTCTATGAATAATTTATATGCCCATCTTGTAGTACCTTATTCAATATCGTGGGGTTCGAACTGAAGAGTTGTTGTTAAACAGGTTTACAGATTGCATCAACTTAATAGAGCAGCTCAACTGGTGACAGCACTTTCATTTACCATAAAAGGAGCTGAAATGACTCCAAATAACTTGGCAATAAACAGCTCTCTGGGTACGCTGTTGAATGTTCTTCAGTTTCTTGGGATCATCTGCATCTGGTCTCTCTCAAGCTTTCTTATGAGGTTTTTCCCGTCAAATGCTGCGACACTGCAGTAAAAGCTCAAAATAAGTTCTTAATAAATTGTGGATCGTATTTTTTGTGCTCGTCTTCTGCTACATTAGAATGTCCATTGGAACATATATTGCTCTCTAACAGCAAGCAGAAATGCTTTCATGGGAACTTGTGGATGATGATATGATAAGGAGAGAATGAAATATTGAAGAAGATGGTGATTGTTGCTGTAACTTTTCATACTCTGTCAATTCCTTTGAATGAATGTTGTAGCAGAGAGAGGACAACTTTTGGTGCTATCTTCTCTTCTTCATTCAGGCCGCTGTTGGAATGTTCTACAAGACTTGATATTTATGGAACTGTTTTAGGAAATTTTTGGTTCTGAGGACAGAATTAGAGCTCTTATTGCTGGTTTCCATTAATATAGTAACTGTATCTGAATTACTTCTTTCAGGCATCTATCAGATTGAAGCTGCCTCTGTTACTTGTAAATGGAGCAAGTCTTTTCTTTTCTTTTCTTCTTTGATTGAGCTGAGTTCAATACTCATGGCCATAAAATTGTGATGAACTGTGATTTGATTGATTACATGCTCTTTATTAGTTGAGAATGCACAACTATGGTATTTTAACTTATAAAGAATGAGTAGGAATCCATATGGTTCCTTGTTTTTATGAGAGAGAATTGTCTTCGATAGGCTTTCCTTCTAGGATTCTCCTCAAAGTTTTTAGGATAGGTAGAAGTTTCAAAGAATTTTCATTGTCCTCTTCAACCGATGTTGGATCTCACAATTTAGTATCTCTAGGGTCTAGCGTATTACTAACACACCATCTCAAGTCCTCCCCCTTTCGAGGTTCAGCCTCTTTGTTGTTGACACAAAAGACTCGAATTCCATTTGTAATTGAATGCCTGCTAGGAAGAAATTTCAACACTCTTACGAAAGTGTATGCTAGGAAAAGGTTTCAACACTCTTACAAATAGTATTTCGTTGTTCTCTTCTCTAACACTCTTGTAAAGGTGCCCGCTATATGCTTCAACACCCTAAGAATAATGTTCATTGTTCTCCTCTCAACCCAGATCTCACATTTTTAGATTTTTTTACATTAAGTTTCTTAAAAATATGTTCATTGTTCTCCTCTCAACCCAGATCTCACATTTTTAGATTTTTTTGCACACTTAAACTCATACAATTGATGATTTTGTTTCAGTTATCTAATTTAA GATATGTTGTGTAATAAACTTTGTATTTGACCTAATTTAGAAGAAAGAAATTTATCCACACAAGGGGAAAGAGAATGAAGGAGTCCCATCGAGGATAGGCGACTAGAGATGGAAATAAGACGGTCAAAAATACATATTCTTCCATTCACCCGCCGTTTGAGGCTACCAATTCCAATAGACACACCGAAGGAGGCGGCTGCGCCTCTGTTGCTATATTGTTTTTCCCGTTTCCAAAACCCATTCTCCAAGAATCATCCAATTCTTCTACTTTCCCTTCATTTTGTTACTTTCTACAGGATTTTCGTCGTGCGTATTGATGAAATGTACTTCGAATCCAACGAGCTCTCATTGGACTTCATCGAAATGGATTACTAGAGTCAGTACTGGAGTTGGGTGCTAATTCTTTCTCTTTCTCGGACATGTCTGTTAAATTTGCTTCTCTTTCTTGTTCGGTTCCTTCTCCATCTTCACCCTCTGGCGCCCGGAGAAGCTCACAGCTGGGCTTTTCGCAAGCGTTGTATGGCATTGGCAGCCAGCAACGTAGTTTCCAGAGGTTAACGTTTGCTAAGGCTGAATCGTTCAAGTTAATGTATGGATTGCTGAGAAGATTTCCAAGGAGGCAAAATATTCTCTCTGCTATTTCAGAGGACCAGTCTCAATGCAGTGAGCAGGGTGAGCTAGAGCAGATAGATCAGCATCCCACTGATGAGGATATCTCCCTCGAAAACAACTCATTTTTACACTCTGACGAGTGTACTGGTGGGAAACCGGGTTTCATCTCGTTTTACAACCATTCTAAAGAAGGTTACCAGACTCGTCTGTCAAGCGTGCAAAGCAATCAACACAAATTCTTATGGTTTGTTGGTCCAGCTGTCCTCGTAGCTTCGTTCATTTTCCCCTCACTTTATCTACGGAAACTACTTTCAAATATTTTCGAGGACTCTCTGTTGACAGGGCCATTAAGGTCAGATGTTTTAAAAACCATTCATTCTTCAAGAACATTTAAGACAAAGGATATTATAGTAAGCAGTGCTCTTAGATCTCTAAGGAACTTCCTTATATTGTTCTTCACGGAAGCACTGTTCTATTGTGGCGTTGCGGTGTTTCTTTTTTTAATAGACCGTTCAAGAAGGCCTACTGAACCCGATACTGTGAGAAACAGTTATCAAACCCTGTCTAATCAATTTGGACAGCGGATCTCTTCTGTAGCTGCCTTAGCACTCAGTTTAATAATACCTATGGTCACTATGGGGTTAGTGTGGCCATGGACAGGCCCTGCAGCATCTGCCACACTTGCACCTTACCTTGTTGGCATCGTTGTCCAATTTGCATTTGAACAATACGCCCGGCGCAAGGAATCGCCTTCATGGCCTGTTATTCCAATTGTCTTTCAAGTTTACAGATTGCATCAACTTAATAGAGCAGCTCAACTGGTGACAGCACTTTCATTTACCATAAAAGGAGCTGAAATGACTCCAAATAACTTGGCAATAAACAGCTCTCTGGGTACGCTGTTGAATGTTCTTCAGTTTCTTGGGATCATCTGCATCTGGTCTCTCTCAAGCTTTCTTATGAGGTTTTTCCCGTCAAATGCTGCGACACTGCATTATCTAATTTAA ATGTCTGTTAAATTTGCTTCTCTTTCTTGTTCGGTTCCTTCTCCATCTTCACCCTCTGGCGCCCGGAGAAGCTCACAGCTGGGCTTTTCGCAAGCGTTGTATGGCATTGGCAGCCAGCAACGTAGTTTCCAGAGGTTAACGTTTGCTAAGGCTGAATCGTTCAAGTTAATGTATGGATTGCTGAGAAGATTTCCAAGGAGGCAAAATATTCTCTCTGCTATTTCAGAGGACCAGTCTCAATGCAGTGAGCAGGGTGAGCTAGAGCAGATAGATCAGCATCCCACTGATGAGGATATCTCCCTCGAAAACAACTCATTTTTACACTCTGACGAGTGTACTGGTGGGAAACCGGGTTTCATCTCGTTTTACAACCATTCTAAAGAAGGTTACCAGACTCGTCTGTCAAGCGTGCAAAGCAATCAACACAAATTCTTATGGTTTGTTGGTCCAGCTGTCCTCGTAGCTTCGTTCATTTTCCCCTCACTTTATCTACGGAAACTACTTTCAAATATTTTCGAGGACTCTCTGTTGACAGGGCCATTAAGGTCAGATGTTTTAAAAACCATTCATTCTTCAAGAACATTTAAGACAAAGGATATTATAGTAAGCAGTGCTCTTAGATCTCTAAGGAACTTCCTTATATTGTTCTTCACGGAAGCACTGTTCTATTGTGGCGTTGCGGTGTTTCTTTTTTTAATAGACCGTTCAAGAAGGCCTACTGAACCCGATACTGTGAGAAACAGTTATCAAACCCTGTCTAATCAATTTGGACAGCGGATCTCTTCTGTAGCTGCCTTAGCACTCAGTTTAATAATACCTATGGTCACTATGGGGTTAGTGTGGCCATGGACAGGCCCTGCAGCATCTGCCACACTTGCACCTTACCTTGTTGGCATCGTTGTCCAATTTGCATTTGAACAATACGCCCGGCGCAAGGAATCGCCTTCATGGCCTGTTATTCCAATTGTCTTTCAAGTTTACAGATTGCATCAACTTAATAGAGCAGCTCAACTGGTGACAGCACTTTCATTTACCATAAAAGGAGCTGAAATGACTCCAAATAACTTGGCAATAAACAGCTCTCTGGGTACGCTGTTGAATGTTCTTCAGTTTCTTGGGATCATCTGCATCTGGTCTCTCTCAAGCTTTCTTATGAGGTTTTTCCCGTCAAATGCTGCGACACTGCATTATCTAATTTAA MSVKFASLSCSVPSPSSPSGARRSSQLGFSQALYGIGSQQRSFQRLTFAKAESFKLMYGLLRRFPRRQNILSAISEDQSQCSEQGELEQIDQHPTDEDISLENNSFLHSDECTGGKPGFISFYNHSKEGYQTRLSSVQSNQHKFLWFVGPAVLVASFIFPSLYLRKLLSNIFEDSLLTGPLRSDVLKTIHSSRTFKTKDIIVSSALRSLRNFLILFFTEALFYCGVAVFLFLIDRSRRPTEPDTVRNSYQTLSNQFGQRISSVAALALSLIIPMVTMGLVWPWTGPAASATLAPYLVGIVVQFAFEQYARRKESPSWPVIPIVFQVYRLHQLNRAAQLVTALSFTIKGAEMTPNNLAINSSLGTLLNVLQFLGIICIWSLSSFLMRFFPSNAATLHYLI Homology
BLAST of CmoCh10G001240 vs. ExPASy TrEMBL
Match: A0A6J1E2A7 (uncharacterized protein LOC111430132 OS=Cucurbita moschata OX=3662 GN=LOC111430132 PE=4 SV=1) HSP 1 Score: 682.9 bits (1761), Expect = 7.8e-193 Identity = 362/395 (91.65%), Postives = 363/395 (91.90%), Query Frame = 0
BLAST of CmoCh10G001240 vs. ExPASy TrEMBL
Match: A0A6J1JM57 (uncharacterized protein LOC111485645 OS=Cucurbita maxima OX=3661 GN=LOC111485645 PE=4 SV=1) HSP 1 Score: 656.8 bits (1693), Expect = 6.0e-185 Identity = 351/395 (88.86%), Postives = 356/395 (90.13%), Query Frame = 0
BLAST of CmoCh10G001240 vs. ExPASy TrEMBL
Match: A0A5D3BHC7 (Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold350G001320 PE=4 SV=1) HSP 1 Score: 593.2 bits (1528), Expect = 8.1e-166 Identity = 324/397 (81.61%), Postives = 341/397 (85.89%), Query Frame = 0
BLAST of CmoCh10G001240 vs. ExPASy TrEMBL
Match: A0A1S3CLW8 (uncharacterized protein LOC103502400 OS=Cucumis melo OX=3656 GN=LOC103502400 PE=4 SV=1) HSP 1 Score: 593.2 bits (1528), Expect = 8.1e-166 Identity = 324/398 (81.41%), Postives = 342/398 (85.93%), Query Frame = 0
BLAST of CmoCh10G001240 vs. ExPASy TrEMBL
Match: A0A0A0LS19 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_1G004340 PE=4 SV=1) HSP 1 Score: 583.6 bits (1503), Expect = 6.4e-163 Identity = 320/398 (80.40%), Postives = 338/398 (84.92%), Query Frame = 0
BLAST of CmoCh10G001240 vs. NCBI nr
Match: XP_022922069.1 (uncharacterized protein LOC111430132 [Cucurbita moschata]) HSP 1 Score: 682.9 bits (1761), Expect = 1.6e-192 Identity = 362/395 (91.65%), Postives = 363/395 (91.90%), Query Frame = 0
BLAST of CmoCh10G001240 vs. NCBI nr
Match: KAG7023120.1 (hypothetical protein SDJN02_14145 [Cucurbita argyrosperma subsp. argyrosperma]) HSP 1 Score: 676.0 bits (1743), Expect = 2.0e-190 Identity = 358/395 (90.63%), Postives = 361/395 (91.39%), Query Frame = 0
BLAST of CmoCh10G001240 vs. NCBI nr
Match: KAG6589440.1 (hypothetical protein SDJN03_14863, partial [Cucurbita argyrosperma subsp. sororia]) HSP 1 Score: 675.2 bits (1741), Expect = 3.3e-190 Identity = 358/395 (90.63%), Postives = 361/395 (91.39%), Query Frame = 0
BLAST of CmoCh10G001240 vs. NCBI nr
Match: XP_023516945.1 (uncharacterized protein LOC111780702 isoform X1 [Cucurbita pepo subsp. pepo]) HSP 1 Score: 674.5 bits (1739), Expect = 5.7e-190 Identity = 357/395 (90.38%), Postives = 361/395 (91.39%), Query Frame = 0
BLAST of CmoCh10G001240 vs. NCBI nr
Match: XP_022988388.1 (uncharacterized protein LOC111485645 [Cucurbita maxima]) HSP 1 Score: 656.8 bits (1693), Expect = 1.2e-184 Identity = 351/395 (88.86%), Postives = 356/395 (90.13%), Query Frame = 0
BLAST of CmoCh10G001240 vs. TAIR 10
Match: AT5G63040.1 (unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: chloroplast; EXPRESSED IN: 25 plant structures; EXPRESSED DURING: 15 growth stages; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT1G48460.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). ) HSP 1 Score: 301.2 bits (770), Expect = 1.2e-81 Identity = 174/295 (58.98%), Postives = 201/295 (68.14%), Query Frame = 0
BLAST of CmoCh10G001240 vs. TAIR 10
Match: AT5G63040.2 (unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: chloroplast; EXPRESSED IN: 25 plant structures; EXPRESSED DURING: 15 growth stages; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT1G48460.1); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink). ) HSP 1 Score: 301.2 bits (770), Expect = 1.2e-81 Identity = 174/295 (58.98%), Postives = 201/295 (68.14%), Query Frame = 0
BLAST of CmoCh10G001240 vs. TAIR 10
Match: AT1G48460.1 (unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: chloroplast envelope; EXPRESSED IN: 21 plant structures; EXPRESSED DURING: 13 growth stages; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT5G63040.1); Has 60 Blast hits to 60 proteins in 14 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 60; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). ) HSP 1 Score: 132.1 bits (331), Expect = 9.8e-31 Identity = 103/354 (29.10%), Postives = 157/354 (44.35%), Query Frame = 0
BLAST of CmoCh10G001240 vs. TAIR 10
Match: AT3G60590.3 (unknown protein; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT1G48460.1); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink). ) HSP 1 Score: 55.1 bits (131), Expect = 1.5e-07 Identity = 62/235 (26.38%), Postives = 99/235 (42.13%), Query Frame = 0
BLAST of CmoCh10G001240 vs. TAIR 10
Match: AT3G60590.2 (unknown protein; LOCATED IN: chloroplast, chloroplast inner membrane, chloroplast envelope; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 14 growth stages; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT1G48460.1); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink). ) HSP 1 Score: 55.1 bits (131), Expect = 1.5e-07 Identity = 62/235 (26.38%), Postives = 99/235 (42.13%), Query Frame = 0
The following BLAST results are available for this feature:
InterPro
Analysis Name: InterPro Annotations of Cucurbita moschata (Rifu) v1
Date Performed: 2021-10-25
Relationships
The following mRNA feature(s) are a part of this gene:
GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
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