CmoCh10G001110 (gene) Cucurbita moschata (Rifu) v1

Overview


Name	CmoCh10G001110
Type	gene
Organism	Cucurbita moschata (Cucurbita moschata (Rifu) v1)
Description	Golgin subfamily A member 6-like protein 2
Location	Cmo_Chr10: 476956 .. 478605 (+)
RNA-Seq Expression	CmoCh10G001110
Synteny	CmoCh10G001110

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonfive_prime_UTRCDSpolypeptidethree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

ATCAGATTCTGAATTCCGAATGGGGTCACAGGTCATATCTGTCTGTATTTCCTTGTATAAAATGACAGCCATTCACGCGCCTCATAGACGTTTCCACTAATCATTAACTCTGAGAAAGAGCTAACCAAGTAGAGCAAGGGATAAGCACAGCCAATATAGGTACCCCAAATGCAGCTCTCTTATGGAGGAGCCTTTCATCTCTCTCCTTTATTTCCAGTCTATAAGGCCAACTTGAAGACTCGCTCAGTAACCCAGAAAGGCTAAAGAAGCAAAGCCTTCACTAAGATGGGTGCATGCTCAAGCAAAGAAGGGAGTGAGATCTGTGATGATGATGTTAGAGGATTGAAAGAAAAGGTAAGGTTACTTAGAGAGGAAGTGAGGGGTGTAATGTCTGAGATGGATAAGGTGACTAAAGCTCATGAGAAAGACAAGATGGTTTTTGCATTTAAGGAGGCAGATTGGAAATCAGAGAAAAAGAGACTCAAAGAGGAGGTGAAGATGTTGAGGAAGAGGGTAAATGAGAGGATTACAGAGATTGAAGAGAGAAATTTTGGAGATAAGACTGCAACAGAGCGAAAGATGGAGGGAACTCCAAATATCATCTTTGGGCAGATACAACAAGAAAGAGCACACAGAGATGAAGCCATTGAGAAGTGGAAGCAGCTTTACCACGCTATCAAGATTGAGCTTGATGACCTAATTCAGAGGACACATAATGGTATGTCTATGAACTTATCTTTTCTTCTAGTCATCACAGAAAATCTAATTTTCCTTTTGTTTCTGAATTTTCTGTTGATTTTCTTTCAATTTACTACTTTTAAGCTCAAGATTAGTGTTAGAAATCACGACTCTCCGCAATGGTATGATATTGTCCACTTTGAGCATAAGCTCTCATGGGTTTTTTTTTTTTTGGGCTTCCCTAGAAGGTCTCGTACCAATGGAGATGTATTCCTTACTTATAAACTCATAATTATTTCCTAAATTAGCCAGTGTGGGACTCCCTCCCAACAATCCTCAACAATTTGATCAGTGAAGGCTAACAAGAATAATAAATGCACATTAGATTTCCCATTACTAACAGGCACTCATCGGTTACTTTGATAGGAGATGGATTATACTGGGGAGCAACTGAGAGGACAGACGCACTACGAACAGAATTACAAGCAAAGGAGGAGACAATAAAAGCCCTCAAAGAACGATTAGTTTCAATGGAGCAAGAAAAATATAAGAGGAACAGAGATATTGACATACTGAGGCAAAGCTTGAGAATTATGACCAGTAAGAAGGAACAGCAGCTAGGTACTTTCCATAAATGCGTCTGTAAGTAACCTGCCCATGAATTGGGCAAGAAAACAAAATTTTCAACACCATATTAGAATGATGAACAAATAATGAAATGCCGATTGAATGTGTTTTGTAAAGATTGTTACCTCTGCACCCCCACCCTTCATTTCAACCCAATGGTCATTCTCATCATCATTTTGTCGGCATGGTCCAAAGGTAAACACATTTTTGTTCCTTAGACTGGGATTTTGGGAAGAGTTGCAAAAGATGAAAAGAAAATAAAAGATTAATCCTCTCTCAGTTGACAGGAAGATACCTGTGCTGATTCATAGATAAGGCTACAATTCAACTTTGATAGACAATCAC

mRNA sequence

ATCAGATTCTGAATTCCGAATGGGGTCACAGGTCATATCTGTCTGTATTTCCTTGTATAAAATGACAGCCATTCACGCGCCTCATAGACGTTTCCACTAATCATTAACTCTGAGAAAGAGCTAACCAAGTAGAGCAAGGGATAAGCACAGCCAATATAGGTACCCCAAATGCAGCTCTCTTATGGAGGAGCCTTTCATCTCTCTCCTTTATTTCCAGTCTATAAGGCCAACTTGAAGACTCGCTCAGTAACCCAGAAAGGCTAAAGAAGCAAAGCCTTCACTAAGATGGGTGCATGCTCAAGCAAAGAAGGGAGTGAGATCTGTGATGATGATGTTAGAGGATTGAAAGAAAAGGTAAGGTTACTTAGAGAGGAAGTGAGGGGTGTAATGTCTGAGATGGATAAGGTGACTAAAGCTCATGAGAAAGACAAGATGGTTTTTGCATTTAAGGAGGCAGATTGGAAATCAGAGAAAAAGAGACTCAAAGAGGAGGTGAAGATGTTGAGGAAGAGGGTAAATGAGAGGATTACAGAGATTGAAGAGAGAAATTTTGGAGATAAGACTGCAACAGAGCGAAAGATGGAGGGAACTCCAAATATCATCTTTGGGCAGATACAACAAGAAAGAGCACACAGAGATGAAGCCATTGAGAAGTGGAAGCAGCTTTACCACGCTATCAAGATTGAGCTTGATGACCTAATTCAGAGGACACATAATGGAGATGGATTATACTGGGGAGCAACTGAGAGGACAGACGCACTACGAACAGAATTACAAGCAAAGGAGGAGACAATAAAAGCCCTCAAAGAACGATTAGTTTCAATGGAGCAAGAAAAATATAAGAGGAACAGAGATATTGACATACTGAGGCAAAGCTTGAGAATTATGACCAGTAAGAAGGAACAGCAGCTAGGTACTTTCCATAAATGCGTCTGTAAGTAACCTGCCCATGAATTGGGCAAGAAAACAAAATTTTCAACACCATATTAGAATGATGAACAAATAATGAAATGCCGATTGAATGTGTTTTGTAAAGATTGTTACCTCTGCACCCCCACCCTTCATTTCAACCCAATGGTCATTCTCATCATCATTTTGTCGGCATGGTCCAAAGGTAAACACATTTTTGTTCCTTAGACTGGGATTTTGGGAAGAGTTGCAAAAGATGAAAAGAAAATAAAAGATTAATCCTCTCTCAGTTGACAGGAAGATACCTGTGCTGATTCATAGATAAGGCTACAATTCAACTTTGATAGACAATCAC

Coding sequence (CDS)

ATGGGTGCATGCTCAAGCAAAGAAGGGAGTGAGATCTGTGATGATGATGTTAGAGGATTGAAAGAAAAGGTAAGGTTACTTAGAGAGGAAGTGAGGGGTGTAATGTCTGAGATGGATAAGGTGACTAAAGCTCATGAGAAAGACAAGATGGTTTTTGCATTTAAGGAGGCAGATTGGAAATCAGAGAAAAAGAGACTCAAAGAGGAGGTGAAGATGTTGAGGAAGAGGGTAAATGAGAGGATTACAGAGATTGAAGAGAGAAATTTTGGAGATAAGACTGCAACAGAGCGAAAGATGGAGGGAACTCCAAATATCATCTTTGGGCAGATACAACAAGAAAGAGCACACAGAGATGAAGCCATTGAGAAGTGGAAGCAGCTTTACCACGCTATCAAGATTGAGCTTGATGACCTAATTCAGAGGACACATAATGGAGATGGATTATACTGGGGAGCAACTGAGAGGACAGACGCACTACGAACAGAATTACAAGCAAAGGAGGAGACAATAAAAGCCCTCAAAGAACGATTAGTTTCAATGGAGCAAGAAAAATATAAGAGGAACAGAGATATTGACATACTGAGGCAAAGCTTGAGAATTATGACCAGTAAGAAGGAACAGCAGCTAGGTACTTTCCATAAATGCGTCTGTAAGTAA

Protein sequence

MGACSSKEGSEICDDDVRGLKEKVRLLREEVRGVMSEMDKVTKAHEKDKMVFAFKEADWKSEKKRLKEEVKMLRKRVNERITEIEERNFGDKTATERKMEGTPNIIFGQIQQERAHRDEAIEKWKQLYHAIKIELDDLIQRTHNGDGLYWGATERTDALRTELQAKEETIKALKERLVSMEQEKYKRNRDIDILRQSLRIMTSKKEQQLGTFHKCVCK

Homology

[Close]

BLAST of CmoCh10G001110 vs. ExPASy TrEMBL
Match: A0A6J1E5M3 (uncharacterized protein LOC111430150 OS=Cucurbita moschata OX=3662 GN=LOC111430150 PE=4 SV=1)

HSP 1 Score: 424.5 bits (1090), Expect = 2.7e-115
Identity = 218/218 (100.00%), Postives = 218/218 (100.00%), Query Frame = 0


Query: 1   MGACSSKEGSEICDDDVRGLKEKVRLLREEVRGVMSEMDKVTKAHEKDKMVFAFKEADWK 60
           MGACSSKEGSEICDDDVRGLKEKVRLLREEVRGVMSEMDKVTKAHEKDKMVFAFKEADWK
Sbjct: 1   MGACSSKEGSEICDDDVRGLKEKVRLLREEVRGVMSEMDKVTKAHEKDKMVFAFKEADWK 60

Query: 61  SEKKRLKEEVKMLRKRVNERITEIEERNFGDKTATERKMEGTPNIIFGQIQQERAHRDEA 120
           SEKKRLKEEVKMLRKRVNERITEIEERNFGDKTATERKMEGTPNIIFGQIQQERAHRDEA
Sbjct: 61  SEKKRLKEEVKMLRKRVNERITEIEERNFGDKTATERKMEGTPNIIFGQIQQERAHRDEA 120

Query: 121 IEKWKQLYHAIKIELDDLIQRTHNGDGLYWGATERTDALRTELQAKEETIKALKERLVSM 180
           IEKWKQLYHAIKIELDDLIQRTHNGDGLYWGATERTDALRTELQAKEETIKALKERLVSM
Sbjct: 121 IEKWKQLYHAIKIELDDLIQRTHNGDGLYWGATERTDALRTELQAKEETIKALKERLVSM 180

Query: 181 EQEKYKRNRDIDILRQSLRIMTSKKEQQLGTFHKCVCK 219
           EQEKYKRNRDIDILRQSLRIMTSKKEQQLGTFHKCVCK
Sbjct: 181 EQEKYKRNRDIDILRQSLRIMTSKKEQQLGTFHKCVCK 218

[Close]

BLAST of CmoCh10G001110 vs. ExPASy TrEMBL
Match: A0A6J1JK50 (uncharacterized protein LOC111485829 OS=Cucurbita maxima OX=3661 GN=LOC111485829 PE=4 SV=1)

HSP 1 Score: 420.6 bits (1080), Expect = 3.9e-114
Identity = 216/218 (99.08%), Postives = 217/218 (99.54%), Query Frame = 0


Query: 1   MGACSSKEGSEICDDDVRGLKEKVRLLREEVRGVMSEMDKVTKAHEKDKMVFAFKEADWK 60
           MGACSSK+GSEICDDDVRGLKEKVRLLREEVRGVMSEMDKVTKAHEKDKMVFAFKEA WK
Sbjct: 1   MGACSSKDGSEICDDDVRGLKEKVRLLREEVRGVMSEMDKVTKAHEKDKMVFAFKEAGWK 60

Query: 61  SEKKRLKEEVKMLRKRVNERITEIEERNFGDKTATERKMEGTPNIIFGQIQQERAHRDEA 120
           SEKKRLKEEVKMLRKRVNERITEIEERNFGDKTATERKMEGTPNIIFGQIQQERAHRDEA
Sbjct: 61  SEKKRLKEEVKMLRKRVNERITEIEERNFGDKTATERKMEGTPNIIFGQIQQERAHRDEA 120

Query: 121 IEKWKQLYHAIKIELDDLIQRTHNGDGLYWGATERTDALRTELQAKEETIKALKERLVSM 180
           IEKWKQLYHAIKIELDDLIQRTHNGDGLYWGATERTDALRTELQAKEETIKALKERLVSM
Sbjct: 121 IEKWKQLYHAIKIELDDLIQRTHNGDGLYWGATERTDALRTELQAKEETIKALKERLVSM 180

Query: 181 EQEKYKRNRDIDILRQSLRIMTSKKEQQLGTFHKCVCK 219
           EQEKYKRNRDIDILRQSLRIMTSKKEQQLGTFHKCVCK
Sbjct: 181 EQEKYKRNRDIDILRQSLRIMTSKKEQQLGTFHKCVCK 218

[Close]

BLAST of CmoCh10G001110 vs. ExPASy TrEMBL
Match: A0A0A0LS07 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_1G004180 PE=4 SV=1)

HSP 1 Score: 355.9 bits (912), Expect = 1.2e-94
Identity = 182/218 (83.49%), Postives = 200/218 (91.74%), Query Frame = 0


Query: 1   MGACSSKEGSEICDDDVRGLKEKVRLLREEVRGVMSEMDKVTKAHEKDKMVFAFKEADWK 60
           MG CSSK+GSEI  DDV+GLKEK+RLLREEVRGV+ EMDK TKAHEKD +VFAFKEA WK
Sbjct: 1   MGVCSSKDGSEIFYDDVKGLKEKIRLLREEVRGVICEMDKETKAHEKDMVVFAFKEAGWK 60

Query: 61  SEKKRLKEEVKMLRKRVNERITEIEERNFGDKTATERKMEGTPNIIFGQIQQERAHRDEA 120
           +EKKRLKEEVKMLRK+V E  TEIEE NFG+K ATE +MEGTPN IF QIQQERA RDEA
Sbjct: 61  TEKKRLKEEVKMLRKKVKESFTEIEEGNFGEKIATEWEMEGTPNTIFEQIQQERARRDEA 120

Query: 121 IEKWKQLYHAIKIELDDLIQRTHNGDGLYWGATERTDALRTELQAKEETIKALKERLVSM 180
           IEKWKQLYHAIKIELDDLIQRTHNGDGL+WG TERT+AL+T+LQAKEETIKALKE++VSM
Sbjct: 121 IEKWKQLYHAIKIELDDLIQRTHNGDGLHWGVTERTEALKTQLQAKEETIKALKEQVVSM 180

Query: 181 EQEKYKRNRDIDILRQSLRIMTSKKEQQLGTFHKCVCK 219
           EQ+KYKRNR+IDILRQSLRIMTSKKEQQ+ TFHKCVCK
Sbjct: 181 EQDKYKRNREIDILRQSLRIMTSKKEQQIETFHKCVCK 218

[Close]

BLAST of CmoCh10G001110 vs. ExPASy TrEMBL
Match: A0A5D3BGY2 (Golgin subfamily A member 6-like protein 2 OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold350G001180 PE=4 SV=1)

HSP 1 Score: 352.8 bits (904), Expect = 1.0e-93
Identity = 179/218 (82.11%), Postives = 201/218 (92.20%), Query Frame = 0


Query: 1   MGACSSKEGSEICDDDVRGLKEKVRLLREEVRGVMSEMDKVTKAHEKDKMVFAFKEADWK 60
           MG CSSK+GSEI  DDV+GLKEK+RLLREEVRGV++EMDK TKAHEKD +VFAFKEA WK
Sbjct: 1   MGVCSSKDGSEIFYDDVKGLKEKIRLLREEVRGVITEMDKETKAHEKDMVVFAFKEASWK 60

Query: 61  SEKKRLKEEVKMLRKRVNERITEIEERNFGDKTATERKMEGTPNIIFGQIQQERAHRDEA 120
           +EKKRL+EEVKMLRK+V E  TEIEE NFG+K ATE +MEGTPN IF QIQQERA RDEA
Sbjct: 61  TEKKRLREEVKMLRKKVKESFTEIEEGNFGEKIATEWEMEGTPNTIFEQIQQERARRDEA 120

Query: 121 IEKWKQLYHAIKIELDDLIQRTHNGDGLYWGATERTDALRTELQAKEETIKALKERLVSM 180
           +EKWKQLYHAIKIELDDLIQRTHNGDGL+WGATERT+AL+T+LQAKEETIK+LKE++VSM
Sbjct: 121 VEKWKQLYHAIKIELDDLIQRTHNGDGLHWGATERTEALKTQLQAKEETIKSLKEQVVSM 180

Query: 181 EQEKYKRNRDIDILRQSLRIMTSKKEQQLGTFHKCVCK 219
           EQ+KYKRNR+IDILRQSLRIMTSKKEQQ+ T HKCVCK
Sbjct: 181 EQDKYKRNREIDILRQSLRIMTSKKEQQIETSHKCVCK 218

[Close]

BLAST of CmoCh10G001110 vs. ExPASy TrEMBL
Match: A0A1S3CLU2 (uncharacterized protein LOC103502383 OS=Cucumis melo OX=3656 GN=LOC103502383 PE=4 SV=1)

HSP 1 Score: 352.8 bits (904), Expect = 1.0e-93
Identity = 179/218 (82.11%), Postives = 201/218 (92.20%), Query Frame = 0


Query: 1   MGACSSKEGSEICDDDVRGLKEKVRLLREEVRGVMSEMDKVTKAHEKDKMVFAFKEADWK 60
           MG CSSK+GSEI  DDV+GLKEK+RLLREEVRGV++EMDK TKAHEKD +VFAFKEA WK
Sbjct: 1   MGVCSSKDGSEIFYDDVKGLKEKIRLLREEVRGVITEMDKETKAHEKDMVVFAFKEASWK 60

Query: 61  SEKKRLKEEVKMLRKRVNERITEIEERNFGDKTATERKMEGTPNIIFGQIQQERAHRDEA 120
           +EKKRL+EEVKMLRK+V E  TEIEE NFG+K ATE +MEGTPN IF QIQQERA RDEA
Sbjct: 61  TEKKRLREEVKMLRKKVKESFTEIEEGNFGEKIATEWEMEGTPNTIFEQIQQERARRDEA 120

Query: 121 IEKWKQLYHAIKIELDDLIQRTHNGDGLYWGATERTDALRTELQAKEETIKALKERLVSM 180
           +EKWKQLYHAIKIELDDLIQRTHNGDGL+WGATERT+AL+T+LQAKEETIK+LKE++VSM
Sbjct: 121 VEKWKQLYHAIKIELDDLIQRTHNGDGLHWGATERTEALKTQLQAKEETIKSLKEQVVSM 180

Query: 181 EQEKYKRNRDIDILRQSLRIMTSKKEQQLGTFHKCVCK 219
           EQ+KYKRNR+IDILRQSLRIMTSKKEQQ+ T HKCVCK
Sbjct: 181 EQDKYKRNREIDILRQSLRIMTSKKEQQIETSHKCVCK 218

[Close]

BLAST of CmoCh10G001110 vs. NCBI nr
Match: XP_022922098.1 (uncharacterized protein LOC111430150 [Cucurbita moschata])

HSP 1 Score: 424.5 bits (1090), Expect = 5.6e-115
Identity = 218/218 (100.00%), Postives = 218/218 (100.00%), Query Frame = 0


Query: 1   MGACSSKEGSEICDDDVRGLKEKVRLLREEVRGVMSEMDKVTKAHEKDKMVFAFKEADWK 60
           MGACSSKEGSEICDDDVRGLKEKVRLLREEVRGVMSEMDKVTKAHEKDKMVFAFKEADWK
Sbjct: 1   MGACSSKEGSEICDDDVRGLKEKVRLLREEVRGVMSEMDKVTKAHEKDKMVFAFKEADWK 60

Query: 61  SEKKRLKEEVKMLRKRVNERITEIEERNFGDKTATERKMEGTPNIIFGQIQQERAHRDEA 120
           SEKKRLKEEVKMLRKRVNERITEIEERNFGDKTATERKMEGTPNIIFGQIQQERAHRDEA
Sbjct: 61  SEKKRLKEEVKMLRKRVNERITEIEERNFGDKTATERKMEGTPNIIFGQIQQERAHRDEA 120

Query: 121 IEKWKQLYHAIKIELDDLIQRTHNGDGLYWGATERTDALRTELQAKEETIKALKERLVSM 180
           IEKWKQLYHAIKIELDDLIQRTHNGDGLYWGATERTDALRTELQAKEETIKALKERLVSM
Sbjct: 121 IEKWKQLYHAIKIELDDLIQRTHNGDGLYWGATERTDALRTELQAKEETIKALKERLVSM 180

Query: 181 EQEKYKRNRDIDILRQSLRIMTSKKEQQLGTFHKCVCK 219
           EQEKYKRNRDIDILRQSLRIMTSKKEQQLGTFHKCVCK
Sbjct: 181 EQEKYKRNRDIDILRQSLRIMTSKKEQQLGTFHKCVCK 218

[Close]

BLAST of CmoCh10G001110 vs. NCBI nr
Match: XP_022988640.1 (uncharacterized protein LOC111485829 [Cucurbita maxima] >KAG6589429.1 hypothetical protein SDJN03_14852, partial [Cucurbita argyrosperma subsp. sororia] >KAG7023108.1 hypothetical protein SDJN02_14133, partial [Cucurbita argyrosperma subsp. argyrosperma])

HSP 1 Score: 420.6 bits (1080), Expect = 8.1e-114
Identity = 216/218 (99.08%), Postives = 217/218 (99.54%), Query Frame = 0


Query: 1   MGACSSKEGSEICDDDVRGLKEKVRLLREEVRGVMSEMDKVTKAHEKDKMVFAFKEADWK 60
           MGACSSK+GSEICDDDVRGLKEKVRLLREEVRGVMSEMDKVTKAHEKDKMVFAFKEA WK
Sbjct: 1   MGACSSKDGSEICDDDVRGLKEKVRLLREEVRGVMSEMDKVTKAHEKDKMVFAFKEAGWK 60

Query: 61  SEKKRLKEEVKMLRKRVNERITEIEERNFGDKTATERKMEGTPNIIFGQIQQERAHRDEA 120
           SEKKRLKEEVKMLRKRVNERITEIEERNFGDKTATERKMEGTPNIIFGQIQQERAHRDEA
Sbjct: 61  SEKKRLKEEVKMLRKRVNERITEIEERNFGDKTATERKMEGTPNIIFGQIQQERAHRDEA 120

Query: 121 IEKWKQLYHAIKIELDDLIQRTHNGDGLYWGATERTDALRTELQAKEETIKALKERLVSM 180
           IEKWKQLYHAIKIELDDLIQRTHNGDGLYWGATERTDALRTELQAKEETIKALKERLVSM
Sbjct: 121 IEKWKQLYHAIKIELDDLIQRTHNGDGLYWGATERTDALRTELQAKEETIKALKERLVSM 180

Query: 181 EQEKYKRNRDIDILRQSLRIMTSKKEQQLGTFHKCVCK 219
           EQEKYKRNRDIDILRQSLRIMTSKKEQQLGTFHKCVCK
Sbjct: 181 EQEKYKRNRDIDILRQSLRIMTSKKEQQLGTFHKCVCK 218

[Close]

BLAST of CmoCh10G001110 vs. NCBI nr
Match: XP_023515394.1 (uncharacterized protein LOC111779565 [Cucurbita pepo subsp. pepo])

HSP 1 Score: 417.9 bits (1073), Expect = 5.3e-113
Identity = 214/218 (98.17%), Postives = 217/218 (99.54%), Query Frame = 0


Query: 1   MGACSSKEGSEICDDDVRGLKEKVRLLREEVRGVMSEMDKVTKAHEKDKMVFAFKEADWK 60
           MGACSSK+GSEICDDDVRGLKEKVRLLREEVRGV+SEMDKVTKAHEKDKMVFAFKEA WK
Sbjct: 1   MGACSSKDGSEICDDDVRGLKEKVRLLREEVRGVVSEMDKVTKAHEKDKMVFAFKEAGWK 60

Query: 61  SEKKRLKEEVKMLRKRVNERITEIEERNFGDKTATERKMEGTPNIIFGQIQQERAHRDEA 120
           +EKKRLKEEVKMLRKRVNERITEIEERNFGDKTATERKMEGTPNIIFGQIQQERAHRDEA
Sbjct: 61  TEKKRLKEEVKMLRKRVNERITEIEERNFGDKTATERKMEGTPNIIFGQIQQERAHRDEA 120

Query: 121 IEKWKQLYHAIKIELDDLIQRTHNGDGLYWGATERTDALRTELQAKEETIKALKERLVSM 180
           IEKWKQLYHAIKIELDDLIQRTHNGDGLYWGATERTDALRTELQAKEETIKALKERLVSM
Sbjct: 121 IEKWKQLYHAIKIELDDLIQRTHNGDGLYWGATERTDALRTELQAKEETIKALKERLVSM 180

Query: 181 EQEKYKRNRDIDILRQSLRIMTSKKEQQLGTFHKCVCK 219
           EQEKYKRNRDIDILRQSLRIMTSKKEQQLGTFHKCVCK
Sbjct: 181 EQEKYKRNRDIDILRQSLRIMTSKKEQQLGTFHKCVCK 218

[Close]

BLAST of CmoCh10G001110 vs. NCBI nr
Match: XP_038879675.1 (uncharacterized protein LOC120071454 [Benincasa hispida])

HSP 1 Score: 357.1 bits (915), Expect = 1.1e-94
Identity = 183/218 (83.94%), Postives = 201/218 (92.20%), Query Frame = 0


Query: 1   MGACSSKEGSEICDDDVRGLKEKVRLLREEVRGVMSEMDKVTKAHEKDKMVFAFKEADWK 60
           MG CSSK+GSEI +D+V+GLKEK+RLLREEVRGVMS MDK TKAHEKD +VFAFKEA WK
Sbjct: 1   MGVCSSKDGSEIYEDEVKGLKEKIRLLREEVRGVMSVMDKETKAHEKDMVVFAFKEAGWK 60

Query: 61  SEKKRLKEEVKMLRKRVNERITEIEERNFGDKTATERKMEGTPNIIFGQIQQERAHRDEA 120
           +EKKRLKEEVKMLRK+V E ITEIEE NFG+K ATE +MEGTPN IF QIQQERA RDEA
Sbjct: 61  TEKKRLKEEVKMLRKKVKESITEIEEGNFGEKIATEWEMEGTPNTIFEQIQQERARRDEA 120

Query: 121 IEKWKQLYHAIKIELDDLIQRTHNGDGLYWGATERTDALRTELQAKEETIKALKERLVSM 180
           IEKWKQLYHAIKIELDDLIQRTHNGDGL+WGA+ERT+AL+TEL+AKEETIKALKE +VSM
Sbjct: 121 IEKWKQLYHAIKIELDDLIQRTHNGDGLHWGASERTEALKTELEAKEETIKALKEEVVSM 180

Query: 181 EQEKYKRNRDIDILRQSLRIMTSKKEQQLGTFHKCVCK 219
           EQEKYKRNR+IDILRQSLRIMTSKKEQQ+  FHKCVCK
Sbjct: 181 EQEKYKRNREIDILRQSLRIMTSKKEQQIEPFHKCVCK 218

[Close]

BLAST of CmoCh10G001110 vs. NCBI nr
Match: XP_004138095.1 (uncharacterized protein LOC101204691 [Cucumis sativus] >KGN63552.1 hypothetical protein Csa_013066 [Cucumis sativus])

HSP 1 Score: 355.9 bits (912), Expect = 2.5e-94
Identity = 182/218 (83.49%), Postives = 200/218 (91.74%), Query Frame = 0


Query: 1   MGACSSKEGSEICDDDVRGLKEKVRLLREEVRGVMSEMDKVTKAHEKDKMVFAFKEADWK 60
           MG CSSK+GSEI  DDV+GLKEK+RLLREEVRGV+ EMDK TKAHEKD +VFAFKEA WK
Sbjct: 1   MGVCSSKDGSEIFYDDVKGLKEKIRLLREEVRGVICEMDKETKAHEKDMVVFAFKEAGWK 60

Query: 61  SEKKRLKEEVKMLRKRVNERITEIEERNFGDKTATERKMEGTPNIIFGQIQQERAHRDEA 120
           +EKKRLKEEVKMLRK+V E  TEIEE NFG+K ATE +MEGTPN IF QIQQERA RDEA
Sbjct: 61  TEKKRLKEEVKMLRKKVKESFTEIEEGNFGEKIATEWEMEGTPNTIFEQIQQERARRDEA 120

Query: 121 IEKWKQLYHAIKIELDDLIQRTHNGDGLYWGATERTDALRTELQAKEETIKALKERLVSM 180
           IEKWKQLYHAIKIELDDLIQRTHNGDGL+WG TERT+AL+T+LQAKEETIKALKE++VSM
Sbjct: 121 IEKWKQLYHAIKIELDDLIQRTHNGDGLHWGVTERTEALKTQLQAKEETIKALKEQVVSM 180

Query: 181 EQEKYKRNRDIDILRQSLRIMTSKKEQQLGTFHKCVCK 219
           EQ+KYKRNR+IDILRQSLRIMTSKKEQQ+ TFHKCVCK
Sbjct: 181 EQDKYKRNREIDILRQSLRIMTSKKEQQIETFHKCVCK 218

[Close]

BLAST of CmoCh10G001110 vs. TAIR 10
Match: AT3G23930.1 (unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: N-terminal protein myristoylation; LOCATED IN: cellular_component unknown; EXPRESSED IN: hypocotyl; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT4G13540.1); Has 10639 Blast hits to 7432 proteins in 646 species: Archae - 82; Bacteria - 826; Metazoa - 5047; Fungi - 759; Plants - 314; Viruses - 86; Other Eukaryotes - 3525 (source: NCBI BLink). )

HSP 1 Score: 120.2 bits (300), Expect = 2.1e-27
Identity = 89/227 (39.21%), Postives = 138/227 (60.79%), Query Frame = 0


Query: 1   MGACSSKEGSEICDDDVRGLKEKVRLLREEVRGVMSEMDKVTKAHEKDKMVF-AFKEA-- 60
           MG C+SK+       + RG++      +++ RG       + +  E++K++F   KEA  
Sbjct: 1   MGGCTSKQ-------ERRGVRSVKETSKDQSRG---RRHLIKERDEREKVMFLQLKEAER 60

Query: 61  DWKSEKKRLKEEVKMLRKRVNERITEIEERNFGDKTATERKMEGTPNIIFGQIQQERAHR 120
           +W+ E+K+L+EEV+ LRK++ ER    EE     KT T  + E    ++  ++  ERA R
Sbjct: 61  EWRKERKKLREEVRRLRKKLEER----EEA----KTTTTEEREYWKWVV-EEMCVERAVR 120

Query: 121 DEAIEKWKQLYHAIKIELDDLIQRTHNGDG-------LYWGATERTDA-----LRTELQA 180
           DEA+EKWKQLY AIK ELD LI  T +  G       L     E T+A     LR E++ 
Sbjct: 121 DEAVEKWKQLYLAIKNELDHLISHTTSSSGEAIMQRKLEEQEEEETEAKRVEVLRDEVRV 180

Query: 181 KEETIKALKERLVSMEQEKYKRNRDIDILRQSLRIMTSKKEQQLGTF 213
           KEET++ L+E++V M+++KY++ R+ID+LRQSLRI+ SKK+++ G+F
Sbjct: 181 KEETVETLEEQIVLMDRQKYEKEREIDLLRQSLRILGSKKKKKTGSF 208

[Close]

BLAST of CmoCh10G001110 vs. TAIR 10
Match: AT4G13540.1 (unknown protein; INVOLVED IN: N-terminal protein myristoylation; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT3G23930.1); Has 4658 Blast hits to 3455 proteins in 431 species: Archae - 39; Bacteria - 387; Metazoa - 1842; Fungi - 436; Plants - 133; Viruses - 38; Other Eukaryotes - 1783 (source: NCBI BLink). )

HSP 1 Score: 96.7 bits (239), Expect = 2.5e-20
Identity = 72/199 (36.18%), Postives = 113/199 (56.78%), Query Frame = 0


Query: 9   GSEICDDDVRGLKEKVRLLREEVRGVMSEMDKVTKAHEKDKMVFAFK--EADWKSEKKRL 68
           G     D+    K ++++   E R      +   +  EK++++ A K  E +W+ E+KRL
Sbjct: 2   GGSTSKDERNSSKRRIKVKANEQR----RRETRRELDEKERVILALKMAETEWRKERKRL 61

Query: 69  KEEVKMLRKRVNERITEIEERNFGDKTATERKMEGTPNIIFGQIQQERAHRDEAIEKWKQ 128
           +EEVK LR+++ E+          +  A + + E     +  Q+  ERA R+EA+E+WKQ
Sbjct: 62  REEVKRLRQKMEEK---------EEGKAKQHEWEW----VVEQMCLERAVREEAVERWKQ 121

Query: 129 LYHAIKIELDDLIQRTHNGDGLYWGATER----TDALRTELQAKEETIKALKERLVSMEQ 188
           LY AIK ELDDLI  T+ G+ L     E        LR E++A+ ETI+ LK R+  ME+
Sbjct: 122 LYFAIKNELDDLIHTTY-GEALRQKPQEEVAKAVQELRKEVKARGETIETLKGRINLMEK 181

Query: 189 EKYKRNRDIDILRQSLRIM 202
           ++  + R+ID+LRQSLRI+
Sbjct: 182 QQNGKEREIDLLRQSLRIL 182

The following BLAST results are available for this feature:

BLAST of CmoCh10G001110 vs.


Match Name	E-value	Identity	Description

BLAST of CmoCh10G001110 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A6J1E5M3	2.7e-115	100.00	uncharacterized protein LOC111430150 OS=Cucurbita moschata OX=3662 GN=LOC1114301...	[more]
A0A6J1JK50	3.9e-114	99.08	uncharacterized protein LOC111485829 OS=Cucurbita maxima OX=3661 GN=LOC111485829...	[more]
A0A0A0LS07	1.2e-94	83.49	Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_1G004180 PE=4 SV=1	[more]
A0A5D3BGY2	1.0e-93	82.11	Golgin subfamily A member 6-like protein 2 OS=Cucumis melo var. makuwa OX=119469...	[more]
A0A1S3CLU2	1.0e-93	82.11	uncharacterized protein LOC103502383 OS=Cucumis melo OX=3656 GN=LOC103502383 PE=...	[more]

BLAST of CmoCh10G001110 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_022922098.1	5.6e-115	100.00	uncharacterized protein LOC111430150 [Cucurbita moschata]	[more]
XP_022988640.1	8.1e-114	99.08	uncharacterized protein LOC111485829 [Cucurbita maxima] >KAG6589429.1 hypothetic...	[more]
XP_023515394.1	5.3e-113	98.17	uncharacterized protein LOC111779565 [Cucurbita pepo subsp. pepo]	[more]
XP_038879675.1	1.1e-94	83.94	uncharacterized protein LOC120071454 [Benincasa hispida]	[more]
XP_004138095.1	2.5e-94	83.49	uncharacterized protein LOC101204691 [Cucumis sativus] >KGN63552.1 hypothetical ...	[more]

BLAST of CmoCh10G001110 vs. TAIR 10


Match Name	E-value	Identity	Description
AT3G23930.1	2.1e-27	39.21	unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: N-termin...	[more]
AT4G13540.1	2.5e-20	36.18	unknown protein; INVOLVED IN: N-terminal protein myristoylation; BEST Arabidopsi...	[more]

InterPro

Analysis Name: InterPro Annotations of Cucurbita moschata (Rifu) v1
Date Performed: 2021-10-25


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	COILS	Coil	Coil	coord: 121..141
None	No IPR available	COILS	Coil	Coil	coord: 156..183
None	No IPR available	COILS	Coil	Coil	coord: 56..87
None	No IPR available	COILS	Coil	Coil	coord: 17..37
None	No IPR available	PANTHER	PTHR37226	GOLGIN FAMILY A PROTEIN	coord: 1..208
None	No IPR available	PANTHER	PTHR37226:SF4	GOLGIN FAMILY A PROTEIN	coord: 1..208

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
CmoCh10G001110.1	CmoCh10G001110.1	mRNA