CmoCh10G000900 (gene) Cucurbita moschata (Rifu) v1

Overview
NameCmoCh10G000900
Typegene
OrganismCucurbita moschata (Cucurbita moschata (Rifu) v1)
DescriptionUnknown protein
LocationCmo_Chr10: 396698 .. 398965 (-)
RNA-Seq ExpressionCmoCh10G000900
SyntenyCmoCh10G000900
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: polypeptideexonCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGAAACATTACCAGACGAGCAGAGTAAACCAAGCGATAACCCCAACCTTCTTTGGCACCAGCCACCCTTTGTTGATCGGTCCAGCTGAAAGTCATGGGGGAAGTGAGTCAGACGACAGAGAGACGAGCAGTTTCAGAGTAAATTAAATCTATTTGATATGTTCTTTTTTCCCTTTGAAGGAGAAAATAGACAGAAGGAGAAAATAGGTTGAAATCATCTGTTACCCAAGGAATTCTGAGAGCCCACCAATCCCAGCAAATTTTAAAGGCTGAGGACCTTCTCTGGCCAGATCCTGTTCCAGGTAAAATGATAGACATCACCAAATTTTCACTTTTACAGACTGGATTAACAGCGAGAGGAAGTAGAAACTTCGAAGTAATAATATCGTTACCTCTTCTTCAGCAGCGTCTAGACCCCCTTGAACCCAGAAGAGGTTTTTGTAACCAGCATTGTAGAGGAGCTCGCATGCAGCTAGGGACCTTCCAAAAGTGTTGTTCAGATGAAAGAAGCCCAGCCAAGATTATAAATTCCTTACAATTTGATCTTTTTGAAGTAATTAACAATATCATTGGTTTAATTCTTTTAGCGAAAGTCTGATACAAAGAAAAGCAATACCACACTAGTACATTCACGATAACATTAGTCAACGCTGGATGAGAGATATCCTAGAAGATTACATGGTCCAATCATTTCAAGTAAAATAACAATGTGTGCGATCCTTTCATCCCCCAATGTGTTATCATAACTTTAACCTGCTGCTTATTGCTGGGTTCAGTATACTTCATTGCAACTATAGTTAGCTGAGCAAATTTTCCTTCACTAGTTACATGGAAGTAAGAAGATCACGTGGAACAGTCCATACTCATAGATATTCTCTGTTTTGGGCCGTTACGTATCGCGGTCAACTTCATAGTTTTAAAACGTGTCTATTAGGGAGAGGTTCCACACTCTTATAAAGAATGTTTCGTTCTCCTCTCCAACCGATGCGGGATTCACAACCCACCCCCTTCCACCATGTGCCCAGCGTCCTCATTGACATGCCGCTCGATGTCTGGCTTTAATACCATTTGTAACAGCCCAAGTTCGCCGCTAGCAGATATTGTTCGATTTTGGCCCGTTACGTATTGCTGTCAGCCTCATGATTTTTAAAACACATCTGCTAGGAAGAGGTTTCTACATTCTTATAAAGAATGTTTTGTTCTCCTCTTCAACCGACATGGGATCTCACATCAAGATTAACCGTTATGGAAAATCAAGAAATCATTATATCCCAAGTTGCAAGCTCAGTGTACAACTCTGCATCGACTGTCTACAAACATTTCCTCCAAGCCCAATCAGAATAAGGAGATTACCTCAATCCCTTTTGACATGCAAGAATAAGGTCAGCATCTTTTGGAAATTTCTCTTGAACTTCTGACAAGAAGCGGCTGTTGAAGTTCAGGCAAAGAAAAAGGTAAATAATTAACAAAAAACAAAAAAGGAGTAGAAGAATTGCTATGGCCTGCGTTATACCTATTGTAGGATACCGTAGGCACACCACTCCACCAACCCCCTAGGCAAATATAAGAACAATGTAAGGAACTAACTGCCAAAATAGCTCGATAAAAAAATAAAGAATAAAAATTTCACTCATCCTAATAACAACTCAAATCTACCGTTAGTAAGCGGTAAATATTATTCTCTTTAGGTTTTCTCTTTCGAGCTTACTCTCAAGACTTTTGAAACATGTCTACTAAGAGAAAGGTTTCCACACCCTTATAAAGAATACTTTGTTCCCCTTTCCAACCAATATGAGATCTCACACATTCCATGGTCAGTAATACTCATTACTTTGTATGATTAACTAATCTTACTAGCAACCATGAGAAGGAAACTAAGTAAAAGTAATTTGTTTCTCTGAATGGAAAGCTGCAAAAATGACAACCAGAGAACTAGACTTTGGTATTTAAAGAAAAGATAGCAAGAGTTTCATGGTACCCATCATGAAGCTTGTGACCTTTCGAGAAAGAGTTCCAGGATCAACTTTGTCATCAACTTCAAAGATTGGGATCCATGTTGAGCCTTTAACCCATGCCTTCAAAACATGGGAGAAACATAAGTTGGAGAGTCAAACAACGAACAAATATGATATCACAAACACCTCAGTGGTCTACCTTTTGGTGTTCTGTAGAAGGACGCACATCAAGCAATGTCTTATCAGAGAGTTGAATGGCATAACCAGCTTCCCTTGGCGTCAGAACTTTCACTTTGCCCTCCCGAATCTGTAG

mRNA sequence

ATGAAACATTACCAGACGAGCAGAGTAAACCAAGCGATAACCCCAACCTTCTTTGGCACCAGCCACCCTTTGTTGATCGGTCCAGCTGAAAGTCATGGGGGAAGTGAGTCAGACGACAGAGAGACGAGCAGTTTCAGAACAGAAGGAGAAAATAGGTTGAAATCATCTGTTACCCAAGGAATTCTGAGAGCCCACCAATCCCAGCAAATTTTAAAGGCTGAGGACCTTCTCTGGCCAGATCCTGTTCCAGATAGCAAGAGTTTCATGGTACCCATCATGAAGCTTGTGACCTTTCGAGAAAGAGTTCCAGGATCAACTTTGTCATCAACTTCAAAGATTGGGATCCATGTTGAGCCTTTAACCCATGCCTTCAAAACATGGGAGAAACATAAGTTGGAGAGTCAAACAACGAACAAATATGATATCACAAACACCTCAGTGGTCTACCTTTTGGTGTTCTGTAGAAGGACGCACATCAAGCAATGTCTTATCAGAGAGTTGAATGGCATAACCAGCTTCCCTTGGCGTCAGAACTTTCACTTTGCCCTCCCGAATCTGTAG

Coding sequence (CDS)

ATGAAACATTACCAGACGAGCAGAGTAAACCAAGCGATAACCCCAACCTTCTTTGGCACCAGCCACCCTTTGTTGATCGGTCCAGCTGAAAGTCATGGGGGAAGTGAGTCAGACGACAGAGAGACGAGCAGTTTCAGAACAGAAGGAGAAAATAGGTTGAAATCATCTGTTACCCAAGGAATTCTGAGAGCCCACCAATCCCAGCAAATTTTAAAGGCTGAGGACCTTCTCTGGCCAGATCCTGTTCCAGATAGCAAGAGTTTCATGGTACCCATCATGAAGCTTGTGACCTTTCGAGAAAGAGTTCCAGGATCAACTTTGTCATCAACTTCAAAGATTGGGATCCATGTTGAGCCTTTAACCCATGCCTTCAAAACATGGGAGAAACATAAGTTGGAGAGTCAAACAACGAACAAATATGATATCACAAACACCTCAGTGGTCTACCTTTTGGTGTTCTGTAGAAGGACGCACATCAAGCAATGTCTTATCAGAGAGTTGAATGGCATAACCAGCTTCCCTTGGCGTCAGAACTTTCACTTTGCCCTCCCGAATCTGTAG

Protein sequence

MKHYQTSRVNQAITPTFFGTSHPLLIGPAESHGGSESDDRETSSFRTEGENRLKSSVTQGILRAHQSQQILKAEDLLWPDPVPDSKSFMVPIMKLVTFRERVPGSTLSSTSKIGIHVEPLTHAFKTWEKHKLESQTTNKYDITNTSVVYLLVFCRRTHIKQCLIRELNGITSFPWRQNFHFALPNL
Homology
The following BLAST results are available for this feature:
Match NameE-valueIdentityDescription
Match NameE-valueIdentityDescription
Match NameE-valueIdentityDescription
Match NameE-valueIdentityDescription
InterPro
Analysis Name: InterPro Annotations of Cucurbita moschata (Rifu) v1
Date Performed: 2021-10-25
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 24..57
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 33..48

Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
CmoCh10G000900.1CmoCh10G000900.1mRNA