CmoCh10G000820 (gene) Cucurbita moschata (Rifu) v1

Overview


Name	CmoCh10G000820
Type	gene
Organism	Cucurbita moschata (Cucurbita moschata (Rifu) v1)
Description	Centromere protein X
Location	Cmo_Chr10: 368458 .. 370156 (+)
RNA-Seq Expression	CmoCh10G000820
Synteny	CmoCh10G000820

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonfive_prime_UTRCDSpolypeptidethree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

GGGAAAGCAGATCAAAACGTTTTGGTGCGGAATAAGTTGTAATTTTAAGGTTGCTTCTTGCAGACTCGCTCTCGCAGTCGCTAGTCTCGCTCGCCATGGAAGAGAGCACATTCGATCCTGTAATCTTTCATCTTCGAGTTTGATCGTTTTCCTTGAAGTTTTATTCGTCGATTGTTTGTTCTCTTAAATGTCTGCTACGTGTATGCTTTCCATTCAACTAGGTGTTTGCTTGTATATAATTGACAGGATCTGATTCACGCCATCTTCAAGCTTGAGTGGAGCAGAAGATCACTTGGTTGGACTTCGGATCGCTCTCTCCTTCCGTCTAGTTTTTATTTTCTTTCAATTTCTAGTTATCTTTGTTTCCTCTTCTTTCTGATAATTTCTTCATTTTCCGTTTTGGTGCTCGCATTTCTTCAGAGCGCGAGAAAAACGAGAGCTCGGATGCTATGGATTGTGAGGTGATTTCCTTTCCCGGAGTTTATTGTGAAAATTTCTGTTTAACCGCTATTATTTTCTTCCGTGAAGATGTTTGTCGTCGTTTTGGTTTTCGATGTACTGGTACATAGGTAAATCTTAGAATGCTCTTGTTAGTTCTTGAAGTTCACACGATTCTACTAATTTTGTGTACATTTCAACTACCGAACATATGCACTAGGCAGAAGTATATATGAAAGTTGATATGTAGTCTAATGGATTTAACAACAAATCAGTGATTATCTATCTTGTTGCGAACTTGGAGTAAGGTTCTTTCTCGATTAGTCCAGTGGAGTTGATCTTTAGCTCACATATTTTCTTCAGGTTGACGCTGGAACATCAAAGAAGAGCAGGCCGATGTCAGGTGTCATTAGTTTTTACGTCAACAACTTGTTTTTCATTTCTAAATCGTAGTTTCTATTATGCTAGTCTTTTTTCCATCAAGCTCGTGTTCTTTGAATGGTTGCCGTCTACCGGAAGATGCAGAAACCATTTCTAACCTCGCTATTCCCATGCAGCCAATGCTAATGCACTTAAATTGACCTCTAAACTTCTACAAATCTTTGTGTCAGGTACCCAAAGTCAGAGGCTAATTTGGTTTATAAAAAATTTCTTCTTCTTTTAGGTTAACTTTTTTTATTTATGCAGAGGCCGTACAGCGTGCTGCAACAATTGCTGAAGCAGAAGGTATTAGCAGAATTGAAGCCACTCATTTGGAGAGGATTCTTCCGCAGTTACTACTGGACTTTTGAGGTAGCATTCCGTTTCAATGTTTTGCTCTTGAAGATTAAGTTCTTGATTTATGGAGTGATTATTGGGGCTGTATCAGTCGTTAATGCCTAAGTTTGCTAATATGAGAGAGATCTCATAAATAGAATGGGATTGGGGGTAGATATTGGTATATGTTTCAAGTAGTTTGTAATTGGGAGGGTAGGAGAGAGTTTTCTCGTTTTGTAGCCTTCTTCTGATCCCAATACGAACATCAATCTAGTTCATCAGTCCAATTCTAACTCGGTGCTCACACTCCATAGTCTATATAGAAGTAGGTTTCAGAATGCACAGCTGGTGTTGTGGATAAATTTCTCAATGAAAGAACTTCCTATCCATTAAAAATTCCTCTTGCTGGTTTGTTTGGTTTTTGTAAGAGATTCCTCTAAGGTCGGCTAAGAGATGTCTTTTCCAGGAGGATCAAGCAGCCAATAAAAGAATTTGTATGAACAAG

mRNA sequence

GGGAAAGCAGATCAAAACGTTTTGGTGCGGAATAAGTTGTAATTTTAAGGTTGCTTCTTGCAGACTCGCTCTCGCAGTCGCTAGTCTCGCTCGCCATGGAAGAGAGCACATTCGATCCTGATCTGATTCACGCCATCTTCAAGCTTGAGTGGAGCAGAAGATCACTTGAGCGCGAGAAAAACGAGAGCTCGGATGCTATGGATTGTGAGGTTGACGCTGGAACATCAAAGAAGAGCAGGCCGATGTCAGCCAATGCTAATGCACTTAAATTGACCTCTAAACTTCTACAAATCTTTGTGTCAGAGGCCGTACAGCGTGCTGCAACAATTGCTGAAGCAGAAGGTATTAGCAGAATTGAAGCCACTCATTTGGAGAGGATTCTTCCGCAGTTACTACTGGACTTTTGAGGTAGCATTCCGTTTCAATGTTTTGCTCTTGAAGATTAAGTTCTTGATTTATGGAGTGATTATTGGGGCTGTATCAGTCGTTAATGCCTAAGTTTGCTAATATGAGAGAGATCTCATAAATAGAATGGGATTGGGGGTAGATATTGGTATATGTTTCAAGTAGTTTGTAATTGGGAGGGTAGGAGAGAGTTTTCTCGTTTTGTAGCCTTCTTCTGATCCCAATACGAACATCAATCTAGTTCATCAGTCCAATTCTAACTCGGTGCTCACACTCCATAGTCTATATAGAAGTAGGTTTCAGAATGCACAGCTGGTGTTGTGGATAAATTTCTCAATGAAAGAACTTCCTATCCATTAAAAATTCCTCTTGCTGGTTTGTTTGGTTTTTGTAAGAGATTCCTCTAAGGTCGGCTAAGAGATGTCTTTTCCAGGAGGATCAAGCAGCCAATAAAAGAATTTGTATGAACAAG

Coding sequence (CDS)

ATGGAAGAGAGCACATTCGATCCTGATCTGATTCACGCCATCTTCAAGCTTGAGTGGAGCAGAAGATCACTTGAGCGCGAGAAAAACGAGAGCTCGGATGCTATGGATTGTGAGGTTGACGCTGGAACATCAAAGAAGAGCAGGCCGATGTCAGCCAATGCTAATGCACTTAAATTGACCTCTAAACTTCTACAAATCTTTGTGTCAGAGGCCGTACAGCGTGCTGCAACAATTGCTGAAGCAGAAGGTATTAGCAGAATTGAAGCCACTCATTTGGAGAGGATTCTTCCGCAGTTACTACTGGACTTTTGA

Protein sequence

MEESTFDPDLIHAIFKLEWSRRSLEREKNESSDAMDCEVDAGTSKKSRPMSANANALKLTSKLLQIFVSEAVQRAATIAEAEGISRIEATHLERILPQLLLDF

Homology

[Close]

BLAST of CmoCh10G000820 vs. ExPASy Swiss-Prot
Match: Q8L7N3 (Protein MHF2 homolog OS=Arabidopsis thaliana OX=3702 GN=MHF2 PE=3 SV=1)

HSP 1 Score: 130.2 bits (326), Expect = 1.4e-29
Identity = 70/100 (70.00%), Postives = 84/100 (84.00%), Query Frame = 0


Query: 4   STFDPDLIHAIFKLEWSRRSLEREKNESSDAMDCEVDAGTSKKSRPMSANANALKLTSKL 63
           +TFD DLIHAIFK  W+RR  ERE++++ DA + EV  GT+KK+R  SANANALKL+ +L
Sbjct: 5   NTFDSDLIHAIFKHIWARRFRERERSDAIDATEAEVALGTTKKNRLASANANALKLSCEL 64

Query: 64  LQIFVSEAVQRAATIAEAEGISRIEATHLERILPQLLLDF 104
           L+ FVSEAVQRAA IAEAEG+ +IEATHLERILPQLLLDF
Sbjct: 65  LKSFVSEAVQRAAIIAEAEGMEKIEATHLERILPQLLLDF 104

[Close]

BLAST of CmoCh10G000820 vs. ExPASy Swiss-Prot
Match: P0DJH7 (Centromere protein X OS=Gallus gallus OX=9031 GN=CENPX PE=1 SV=1)

HSP 1 Score: 54.3 bits (129), Expect = 9.5e-07
Identity = 26/51 (50.98%), Postives = 39/51 (76.47%), Query Frame = 0


Query: 53  NANALKLTSKLLQIFVSEAVQRAATIAEAEGISRIEATHLERILPQLLLDF 104
           N +AL L ++LL++FV EA  RAA  A+AE + +++  H+E++LPQLLLDF
Sbjct: 29  NGDALLLMAELLKVFVREAAARAARQAQAEDLEKVDIEHVEKVLPQLLLDF 79

[Close]

BLAST of CmoCh10G000820 vs. ExPASy Swiss-Prot
Match: Q2NKU0 (Centromere protein X OS=Bos taurus OX=9913 GN=CENPX PE=3 SV=1)

HSP 1 Score: 52.4 bits (124), Expect = 3.6e-06
Identity = 26/58 (44.83%), Postives = 41/58 (70.69%), Query Frame = 0


Query: 46  KSRPMSANANALKLTSKLLQIFVSEAVQRAATIAEAEGISRIEATHLERILPQLLLDF 104
           K +    + +AL+L ++LL+IFV EA  R+   A+AEG++ ++   LE++LPQLLLDF
Sbjct: 22  KDKKTKVSGDALQLVAELLKIFVVEAAIRSVRQAQAEGLAHVDVEQLEKVLPQLLLDF 79

[Close]

BLAST of CmoCh10G000820 vs. ExPASy Swiss-Prot
Match: A8MT69 (Centromere protein X OS=Homo sapiens OX=9606 GN=CENPX PE=1 SV=1)

HSP 1 Score: 45.8 bits (107), Expect = 3.4e-04
Identity = 25/58 (43.10%), Postives = 36/58 (62.07%), Query Frame = 0


Query: 46  KSRPMSANANALKLTSKLLQIFVSEAVQRAATIAEAEGISRIEATHLERILPQLLLDF 104
           K      + +AL+L  +LL++FV EA  R    A+AE   R++   LE++LPQLLLDF
Sbjct: 24  KDDKTKVSGDALQLMVELLKVFVVEAAVRGVRQAQAEDALRVDVDQLEKVLPQLLLDF 81

[Close]

BLAST of CmoCh10G000820 vs. ExPASy Swiss-Prot
Match: Q8C4X1 (Centromere protein X OS=Mus musculus OX=10090 GN=Cenpx PE=2 SV=1)

HSP 1 Score: 45.8 bits (107), Expect = 3.4e-04
Identity = 24/51 (47.06%), Postives = 35/51 (68.63%), Query Frame = 0


Query: 53  NANALKLTSKLLQIFVSEAVQRAATIAEAEGISRIEATHLERILPQLLLDF 104
           + +AL+L ++ L+IFV EA  R    A+AE +  +E   LE++LPQLLLDF
Sbjct: 28  SGDALQLMAEFLRIFVLEAAVRGVWQAQAEDLDVVEVDQLEKVLPQLLLDF 78

[Close]

BLAST of CmoCh10G000820 vs. ExPASy TrEMBL
Match: A0A6J1E4X1 (protein MHF2 homolog OS=Cucurbita moschata OX=3662 GN=LOC111429969 PE=3 SV=1)

HSP 1 Score: 195.3 bits (495), Expect = 1.3e-46
Identity = 103/103 (100.00%), Postives = 103/103 (100.00%), Query Frame = 0


Query: 1   MEESTFDPDLIHAIFKLEWSRRSLEREKNESSDAMDCEVDAGTSKKSRPMSANANALKLT 60
           MEESTFDPDLIHAIFKLEWSRRSLEREKNESSDAMDCEVDAGTSKKSRPMSANANALKLT
Sbjct: 1   MEESTFDPDLIHAIFKLEWSRRSLEREKNESSDAMDCEVDAGTSKKSRPMSANANALKLT 60

Query: 61  SKLLQIFVSEAVQRAATIAEAEGISRIEATHLERILPQLLLDF 104
           SKLLQIFVSEAVQRAATIAEAEGISRIEATHLERILPQLLLDF
Sbjct: 61  SKLLQIFVSEAVQRAATIAEAEGISRIEATHLERILPQLLLDF 103

[Close]

BLAST of CmoCh10G000820 vs. ExPASy TrEMBL
Match: A0A6J1JD93 (protein MHF2 homolog OS=Cucurbita maxima OX=3661 GN=LOC111484772 PE=3 SV=1)

HSP 1 Score: 192.6 bits (488), Expect = 8.2e-46
Identity = 101/103 (98.06%), Postives = 103/103 (100.00%), Query Frame = 0


Query: 1   MEESTFDPDLIHAIFKLEWSRRSLEREKNESSDAMDCEVDAGTSKKSRPMSANANALKLT 60
           MEESTFDPDLIHAIFKLEW+RRSLEREKNESSDAMDCEVDAGTSKKSRPMSANANALKL+
Sbjct: 1   MEESTFDPDLIHAIFKLEWTRRSLEREKNESSDAMDCEVDAGTSKKSRPMSANANALKLS 60

Query: 61  SKLLQIFVSEAVQRAATIAEAEGISRIEATHLERILPQLLLDF 104
           SKLLQIFVSEAVQRAATIAEAEGISRIEATHLERILPQLLLDF
Sbjct: 61  SKLLQIFVSEAVQRAATIAEAEGISRIEATHLERILPQLLLDF 103

[Close]

BLAST of CmoCh10G000820 vs. ExPASy TrEMBL
Match: A0A6J1C4N9 (protein MHF2 homolog OS=Momordica charantia OX=3673 GN=LOC111007351 PE=3 SV=1)

HSP 1 Score: 185.3 bits (469), Expect = 1.3e-43
Identity = 97/103 (94.17%), Postives = 101/103 (98.06%), Query Frame = 0


Query: 1   MEESTFDPDLIHAIFKLEWSRRSLEREKNESSDAMDCEVDAGTSKKSRPMSANANALKLT 60
           MEES FD DLIHAIFKLEWSRRSLERE+NESSDAMDCEV+AGTSKKSRPMSANANALKL+
Sbjct: 1   MEESAFDHDLIHAIFKLEWSRRSLERERNESSDAMDCEVEAGTSKKSRPMSANANALKLS 60

Query: 61  SKLLQIFVSEAVQRAATIAEAEGISRIEATHLERILPQLLLDF 104
           SKLLQIF+SEAVQRAATIAEAEGISRIEATHLERILPQLLLDF
Sbjct: 61  SKLLQIFISEAVQRAATIAEAEGISRIEATHLERILPQLLLDF 103

[Close]

BLAST of CmoCh10G000820 vs. ExPASy TrEMBL
Match: A0A1S3CLK5 (centromere protein X isoform X2 OS=Cucumis melo OX=3656 GN=LOC103502356 PE=3 SV=1)

HSP 1 Score: 173.7 bits (439), Expect = 4.0e-40
Identity = 92/105 (87.62%), Postives = 98/105 (93.33%), Query Frame = 0


Query: 1   MEESTFDPDLIHAIFKLEWSRRSLEREKNESSDAMDCEVD--AGTSKKSRPMSANANALK 60
           MEE+ F PDLIHAIFKLEWSRRSLEREKNE+ DAMDCEVD  AGTSKKSRPMSANANALK
Sbjct: 1   MEETGFHPDLIHAIFKLEWSRRSLEREKNENPDAMDCEVDAGAGTSKKSRPMSANANALK 60

Query: 61  LTSKLLQIFVSEAVQRAATIAEAEGISRIEATHLERILPQLLLDF 104
           L+SKL+QIF+SEAVQRAATIAEAEGI RIE THLER+LPQLLLDF
Sbjct: 61  LSSKLVQIFISEAVQRAATIAEAEGIGRIEPTHLERVLPQLLLDF 105

[Close]

BLAST of CmoCh10G000820 vs. ExPASy TrEMBL
Match: A0A0A0LU58 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_1G002850 PE=3 SV=1)

HSP 1 Score: 171.4 bits (433), Expect = 2.0e-39
Identity = 93/106 (87.74%), Postives = 100/106 (94.34%), Query Frame = 0


Query: 1   MEESTFDPDLIHAIFKLEWSRRSLEREKNESS-DAMDCEVD--AGTSKKSRPMSANANAL 60
           MEE+ F PDLIHAIFKLEWSRRSLEREKNE++ DAMDCEVD  AGTSKKSRPMSANANAL
Sbjct: 72  MEETGFHPDLIHAIFKLEWSRRSLEREKNENNPDAMDCEVDAGAGTSKKSRPMSANANAL 131

Query: 61  KLTSKLLQIFVSEAVQRAATIAEAEGISRIEATHLERILPQLLLDF 104
           KL+SKL+QIF+SEAVQRAATIAEAEGISRIE THLER+LPQLLLDF
Sbjct: 132 KLSSKLVQIFISEAVQRAATIAEAEGISRIEPTHLERVLPQLLLDF 177

[Close]

BLAST of CmoCh10G000820 vs. NCBI nr
Match: XP_022921828.1 (protein MHF2 homolog [Cucurbita moschata])

HSP 1 Score: 195.3 bits (495), Expect = 2.6e-46
Identity = 103/103 (100.00%), Postives = 103/103 (100.00%), Query Frame = 0


Query: 1   MEESTFDPDLIHAIFKLEWSRRSLEREKNESSDAMDCEVDAGTSKKSRPMSANANALKLT 60
           MEESTFDPDLIHAIFKLEWSRRSLEREKNESSDAMDCEVDAGTSKKSRPMSANANALKLT
Sbjct: 1   MEESTFDPDLIHAIFKLEWSRRSLEREKNESSDAMDCEVDAGTSKKSRPMSANANALKLT 60

Query: 61  SKLLQIFVSEAVQRAATIAEAEGISRIEATHLERILPQLLLDF 104
           SKLLQIFVSEAVQRAATIAEAEGISRIEATHLERILPQLLLDF
Sbjct: 61  SKLLQIFVSEAVQRAATIAEAEGISRIEATHLERILPQLLLDF 103

[Close]

BLAST of CmoCh10G000820 vs. NCBI nr
Match: KAG6589406.1 (Protein JINGUBANG, partial [Cucurbita argyrosperma subsp. sororia])

HSP 1 Score: 195.3 bits (495), Expect = 2.6e-46
Identity = 103/103 (100.00%), Postives = 103/103 (100.00%), Query Frame = 0


Query: 1   MEESTFDPDLIHAIFKLEWSRRSLEREKNESSDAMDCEVDAGTSKKSRPMSANANALKLT 60
           MEESTFDPDLIHAIFKLEWSRRSLEREKNESSDAMDCEVDAGTSKKSRPMSANANALKLT
Sbjct: 335 MEESTFDPDLIHAIFKLEWSRRSLEREKNESSDAMDCEVDAGTSKKSRPMSANANALKLT 394

Query: 61  SKLLQIFVSEAVQRAATIAEAEGISRIEATHLERILPQLLLDF 104
           SKLLQIFVSEAVQRAATIAEAEGISRIEATHLERILPQLLLDF
Sbjct: 395 SKLLQIFVSEAVQRAATIAEAEGISRIEATHLERILPQLLLDF 437

[Close]

BLAST of CmoCh10G000820 vs. NCBI nr
Match: XP_023516676.1 (protein MHF2 homolog [Cucurbita pepo subsp. pepo])

HSP 1 Score: 193.7 bits (491), Expect = 7.6e-46
Identity = 102/103 (99.03%), Postives = 103/103 (100.00%), Query Frame = 0


Query: 1   MEESTFDPDLIHAIFKLEWSRRSLEREKNESSDAMDCEVDAGTSKKSRPMSANANALKLT 60
           MEESTFDPDLIHAIFKLEWSRRSLEREKNESSDAMDCEVDAGTSKKSRPMSANANALKL+
Sbjct: 1   MEESTFDPDLIHAIFKLEWSRRSLEREKNESSDAMDCEVDAGTSKKSRPMSANANALKLS 60

Query: 61  SKLLQIFVSEAVQRAATIAEAEGISRIEATHLERILPQLLLDF 104
           SKLLQIFVSEAVQRAATIAEAEGISRIEATHLERILPQLLLDF
Sbjct: 61  SKLLQIFVSEAVQRAATIAEAEGISRIEATHLERILPQLLLDF 103

[Close]

BLAST of CmoCh10G000820 vs. NCBI nr
Match: XP_022987126.1 (protein MHF2 homolog [Cucurbita maxima])

HSP 1 Score: 192.6 bits (488), Expect = 1.7e-45
Identity = 101/103 (98.06%), Postives = 103/103 (100.00%), Query Frame = 0


Query: 1   MEESTFDPDLIHAIFKLEWSRRSLEREKNESSDAMDCEVDAGTSKKSRPMSANANALKLT 60
           MEESTFDPDLIHAIFKLEW+RRSLEREKNESSDAMDCEVDAGTSKKSRPMSANANALKL+
Sbjct: 1   MEESTFDPDLIHAIFKLEWTRRSLEREKNESSDAMDCEVDAGTSKKSRPMSANANALKLS 60

Query: 61  SKLLQIFVSEAVQRAATIAEAEGISRIEATHLERILPQLLLDF 104
           SKLLQIFVSEAVQRAATIAEAEGISRIEATHLERILPQLLLDF
Sbjct: 61  SKLLQIFVSEAVQRAATIAEAEGISRIEATHLERILPQLLLDF 103

[Close]

BLAST of CmoCh10G000820 vs. NCBI nr
Match: XP_022135388.1 (protein MHF2 homolog [Momordica charantia])

HSP 1 Score: 185.3 bits (469), Expect = 2.7e-43
Identity = 97/103 (94.17%), Postives = 101/103 (98.06%), Query Frame = 0


Query: 1   MEESTFDPDLIHAIFKLEWSRRSLEREKNESSDAMDCEVDAGTSKKSRPMSANANALKLT 60
           MEES FD DLIHAIFKLEWSRRSLERE+NESSDAMDCEV+AGTSKKSRPMSANANALKL+
Sbjct: 1   MEESAFDHDLIHAIFKLEWSRRSLERERNESSDAMDCEVEAGTSKKSRPMSANANALKLS 60

Query: 61  SKLLQIFVSEAVQRAATIAEAEGISRIEATHLERILPQLLLDF 104
           SKLLQIF+SEAVQRAATIAEAEGISRIEATHLERILPQLLLDF
Sbjct: 61  SKLLQIFISEAVQRAATIAEAEGISRIEATHLERILPQLLLDF 103

[Close]

BLAST of CmoCh10G000820 vs. TAIR 10
Match: AT1G78790.1 (unknown protein; CONTAINS InterPro DOMAIN/s: Protein of unknown function DUF2008 (InterPro:IPR018552); Has 69 Blast hits to 69 proteins in 28 species: Archae - 0; Bacteria - 0; Metazoa - 33; Fungi - 0; Plants - 33; Viruses - 0; Other Eukaryotes - 3 (source: NCBI BLink). )

HSP 1 Score: 130.2 bits (326), Expect = 9.7e-31
Identity = 70/100 (70.00%), Postives = 84/100 (84.00%), Query Frame = 0


Query: 4   STFDPDLIHAIFKLEWSRRSLEREKNESSDAMDCEVDAGTSKKSRPMSANANALKLTSKL 63
           +TFD DLIHAIFK  W+RR  ERE++++ DA + EV  GT+KK+R  SANANALKL+ +L
Sbjct: 5   NTFDSDLIHAIFKHIWARRFRERERSDAIDATEAEVALGTTKKNRLASANANALKLSCEL 64

Query: 64  LQIFVSEAVQRAATIAEAEGISRIEATHLERILPQLLLDF 104
           L+ FVSEAVQRAA IAEAEG+ +IEATHLERILPQLLLDF
Sbjct: 65  LKSFVSEAVQRAAIIAEAEGMEKIEATHLERILPQLLLDF 104

[Close]

BLAST of CmoCh10G000820 vs. TAIR 10
Match: AT1G78790.2 (unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: cellular_component unknown; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: Protein of unknown function DUF2008 (InterPro:IPR018552); Has 27 Blast hits to 27 proteins in 13 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 27; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). )

HSP 1 Score: 99.4 bits (246), Expect = 1.8e-21
Identity = 57/100 (57.00%), Postives = 68/100 (68.00%), Query Frame = 0


Query: 4   STFDPDLIHAIFKLEWSRRSLEREKNESSDAMDCEVDAGTSKKSRPMSANANALKLTSKL 63
           +TFD DLIHAIFK  W+RR  ERE++++ DA + EV  GT+KK+R               
Sbjct: 5   NTFDSDLIHAIFKHIWARRFRERERSDAIDATEAEVALGTTKKNR--------------- 64

Query: 64  LQIFVSEAVQRAATIAEAEGISRIEATHLERILPQLLLDF 104
                SEAVQRAA IAEAEG+ +IEATHLERILPQLLLDF
Sbjct: 65  ---LASEAVQRAAIIAEAEGMEKIEATHLERILPQLLLDF 86

The following BLAST results are available for this feature:

BLAST of CmoCh10G000820 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
Q8L7N3	1.4e-29	70.00	Protein MHF2 homolog OS=Arabidopsis thaliana OX=3702 GN=MHF2 PE=3 SV=1	[more]
P0DJH7	9.5e-07	50.98	Centromere protein X OS=Gallus gallus OX=9031 GN=CENPX PE=1 SV=1	[more]
Q2NKU0	3.6e-06	44.83	Centromere protein X OS=Bos taurus OX=9913 GN=CENPX PE=3 SV=1	[more]
A8MT69	3.4e-04	43.10	Centromere protein X OS=Homo sapiens OX=9606 GN=CENPX PE=1 SV=1	[more]
Q8C4X1	3.4e-04	47.06	Centromere protein X OS=Mus musculus OX=10090 GN=Cenpx PE=2 SV=1	[more]

BLAST of CmoCh10G000820 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A6J1E4X1	1.3e-46	100.00	protein MHF2 homolog OS=Cucurbita moschata OX=3662 GN=LOC111429969 PE=3 SV=1	[more]
A0A6J1JD93	8.2e-46	98.06	protein MHF2 homolog OS=Cucurbita maxima OX=3661 GN=LOC111484772 PE=3 SV=1	[more]
A0A6J1C4N9	1.3e-43	94.17	protein MHF2 homolog OS=Momordica charantia OX=3673 GN=LOC111007351 PE=3 SV=1	[more]
A0A1S3CLK5	4.0e-40	87.62	centromere protein X isoform X2 OS=Cucumis melo OX=3656 GN=LOC103502356 PE=3 SV=...	[more]
A0A0A0LU58	2.0e-39	87.74	Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_1G002850 PE=3 SV=1	[more]

BLAST of CmoCh10G000820 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_022921828.1	2.6e-46	100.00	protein MHF2 homolog [Cucurbita moschata]	[more]
KAG6589406.1	2.6e-46	100.00	Protein JINGUBANG, partial [Cucurbita argyrosperma subsp. sororia]	[more]
XP_023516676.1	7.6e-46	99.03	protein MHF2 homolog [Cucurbita pepo subsp. pepo]	[more]
XP_022987126.1	1.7e-45	98.06	protein MHF2 homolog [Cucurbita maxima]	[more]
XP_022135388.1	2.7e-43	94.17	protein MHF2 homolog [Momordica charantia]	[more]

BLAST of CmoCh10G000820 vs. TAIR 10


Match Name	E-value	Identity	Description
AT1G78790.1	9.7e-31	70.00	unknown protein; CONTAINS InterPro DOMAIN/s: Protein of unknown function DUF2008...	[more]
AT1G78790.2	1.8e-21	57.00	unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biologic...	[more]

InterPro

Analysis Name: InterPro Annotations of Cucurbita moschata (Rifu) v1
Date Performed: 2021-10-25


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR018552	Centromere protein X	PFAM	PF09415	CENP-X	coord: 50..103 e-value: 1.2E-15 score: 57.6
IPR018552	Centromere protein X	PANTHER	PTHR28680	CENTROMERE PROTEIN X	coord: 2..103
None	No IPR available	GENE3D	6.10.130.30		coord: 62..103 e-value: 1.9E-18 score: 68.3
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 26..43
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 26..51

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
CmoCh10G000820.1	CmoCh10G000820.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0006281	DNA repair
biological_process	GO:0051382	kinetochore assembly
molecular_function	GO:0003677	DNA binding