CmoCh09G013320 (gene) Cucurbita moschata (Rifu) v1
Overview
Sequences
The following sequences are available for this feature:
Legend: exonfive_prime_UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.ATTTCCTCAAGGATTTTGTGCAACCTTGTCTTGTGGCTGGAGTAGTTGAAAATGGTGACTCTCCAAAAGTAGCTATTGCACCCGAGCCTATTATGTATGATGTTGGTGCACACCTGAAGAAGAATTTCCTTCCCTTGCACCTGAGCCTATTACTTTAGATACTGCTGTTTCCACTGACATAGTTAACGCACTTTGAAGATCATCTAGATCACAGTCTCCACCCAATTACCTGAGGGACTCTCACCGCAATCTGTTGGCTCAATCCCTTATGAATTCATCCTCTGAACCATTTTACTTGAGCAAATTCATTTCCTTTGCTGTATATTCTCCTTTCATAAGCATTGGTGTTGAATTTTCCTCTGAATATTAGCCATAAAATTGAATTTCACATTTGGTTTAAGCTGGCAGAGCACTTATTCATGTAGACAATGCTTAAAAGTAAATGTGATGTCTGTTTCTTTTATTTTTTGCGTGGAATTCAGGGACTTGGATTGTTGACTGTGTCTGCAACATTACCTTATTCCAGCACTTCTGCCTGCCAACAGACAGAAAACCGTGTCCCATGTTCCCCCAGTCTCGTCCACGTAGTTTTATTTTTCTTCTCCTTATATATTGTGGCATTTGCTCAAGGGGGACATAAGCCTTGCGTCCAAGCTTTCGGAGCCGATCAATTTGATGGACAACATCCAGAAGAGAGAAAAGCTAAAAGCTCTTTCTTTAATTGGTGGTACTTTGGTATCTCTGTGGCCACTTTTGCAACAGTTACTATAGTGAGCTATGTGCAAGATAACCTTAGCTGGAGTCTTGGGTTTGGCATTCCTTGTATTGCTATGGTTTTTGCACTAGTAGTCTTCTTGCTTGGAACTAGACGTACAGGTACAGTAGCGAAGGAGATGTGGAAAACCCATTTGTGAGGATTGGACGGGTGTTTATCATGGCAGTACGAAATTGGCGAGTAATCTCTTCAGAAATAGCTCATGAAGAGGAAATCCTTCGCCTTTTACCGCGCCATAGCTCTCAACAGTTCAGGTAAATCAGAGGACTAAAAGAAGGGTAAAATGTAATAATCTTTTTTCTGTTCAGAAATATAGTTGGATATGGATATCTGATATTTATAGTAAAAAGTGGGTAGAGGAATATAGGGAAGATATTTATAGCAAGTGGTTATATGTTAAGCAGGTAAAAAGTTGTTTATAGTAAACACTATTTATAGTAAAAAGTTAGGTAGATATTTATAGCATGGGGTTATATGGTTTATAGTAAACTATTTATAGTAAAAAGTTAGGTAGATATTTATAGCAAGGATTATATAAAAGTTGGGAAACAGGGGAATAGGTAGATATTTATTGTGTTATATGTTAAAGCTATATACAGTACACTAAAACTACATCTATATATATACTTAGTCAGTGATTTGAACCATATTTTCTCTGTATTCTTGTACTGTATTCTTTGTATTGAAAAACCATATCCTTTAGTCATATATATACTCGTCGTTATTTTTTTTTCTACTGATCTTTGTGTTCATCTAGGTATTTTCTTATATATATATATACTCGCATATTTTCTCTCTACTGGTCTTTGTGTTCATCTAGATTGAGTGTGTGCATTGTTGTTCTTTGTGTTCATCTAGATCGAGTGTGTGCATTGTTGTTCTTTGTGTTCATCTAAATTGAGTGTGTGCATTGTTGTTCTTTGTGTTGATCTAGATCAAGTGTGTGCATTGTTGTTCTTTGTGTTGATCTAGATCGAGTGTGTGCATTGTTGTTCTTTTTGTTGATCTGGATCGAGTGTGTGCATTATTGTTCTTTTTGTTGATTTGGATCGAGTGTGTGCATTGTTGTTCTTTGTGTTCATATAGATCGAATGTGTGCATTGTTGTTCTTTGTGTTCATCTAGATCAAGTGAGTGTGTGCATTGTTGTTCTTTGTGTTGATCTAGATCGAGTGTGTGCATTGTTGTTCTTTGTGTTGATCTAGATCGAGTGTGTGCATTGTTGTTCTTTGTGTTCATCTAGATTGAGTGTGTGCATTGTTGTTCTTTGTGTTCATCTAGATCGAGTGTGTNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNTCTTTGTGTTCATCTAGATTGAGTGTGTGCATTGTTGTTCTTTGTGTTCATCTAGATCGAGTGTGTCTTTTGTTGTTCTTTGTGTTCATCTAGATCGAGTGTGTGTGTTGTTGTTCTTTGTGTTCATCTACATCGAGTGTGTGCATTATTGTGCAATCCTAACACCATTTTATATTGTATGCATTATCGTAACTGTTTTCTTTCCTGGATTCTATAATTTGGTCGGTTCCTAGACAAAGCTTTGATTGTACCTAATAGTTTGAAGGAAGACGGTCATGCTTGTTGTGAATGTTTGCTGAATCCACCACACCTAAATGGTGTGAAAGTTATCTTATTTATAATCAAATAAATTACAAGGATATGAAAATAGTAATAAATGGAAATAACAATAAATGGAAAGATACCTATAGTAATAAGGCAAATATCTATATTTGCCTTATAATAAAATATCAAATATAATATATATGGTAAACTATAATTTATTACTAAATATCCTTAACACTTGTACTATCAGTGAAGTTGAGGAAGCAAAAGCATTAGTAGGGCTTGCCCCCATATGGGTTACATGCTTAGCATATGGTATTGTATTCTCTCAGTCATCAACTTTCTTTACAAAACAAGGAGTCACAATGGACAGATCAATAGTTCCTGGATTTGAAGTACCTGCTGCTTCACTTCAATCCTTTATCAGTCTGTCCATTGGCATTTCCATCCTAATATACGATTGCGAGACGTTTCACCGGGAAACCTTCTGGAAT ATTTCCTCAAGGATTTTGTGCAACCTTGTCTTGTGGCTGGAGTAGTTGAAAATGGTGACTCTCCAAAAGTAGCTATTGCACCCGAGCCTATTATGTATGATGGACTTGGATTGTTGACTGTGTCTGCAACATTACCTTATTCCAGCACTTCTGCCTGCCAACAGACAGAAAACCGTGTCCCATGTTCCCCCAGTCTCGTCCACGTAGTTTTATTTTTCTTCTCCTTATATATTGTGGCATTTGCTCAAGGGGGACATAAGCCTTGCGTCCAAGCTTTCGGAGCCGATCAATTTGATGGACAACATCCAGAAGAGAGAAAAGCTAAAAGCTCTTTCTTTAATTGGTGGTACTTTGGTATCTCTGTGGCCACTTTTGCAACAGTTACTATAGTGAGCTATGTGCAAGATAACCTTAGCTGGAGTCTTGGGTTTGGCATTCCTTGTATTGCTATGACGTACAGGTACAGTAGCGAAGGAGATGTGGAAAACCCATTTGTGAGGATTGGACGGGTGTTTATCATGGCAGTACGAAATTGGCGAGTAATCTCTTCAGAAATAGCTCATGAAGAGGAAATCCTTCGCCTTTTACCGCGCCATAGCTCTCAACAGTTCAGTTGGATATGGATATCTGATATTTATAGTAAAAAGTGGGTAGAGGAATATAGGGAAGATATTTATAGCAAGTGGTTATATGTTAAGCAGTCATCAACTTTCTTTACAAAACAAGGAGTCACAATGGACAGATCAATAGTTCCTGGATTTGAAGTACCTGCTGCTTCACTTCAATCCTTTATCAGTCTGTCCATTGGCATTTCCATCCTAATATACGATTGCGAGACGTTTCACCGGGAAACCTTCTGGAAT ATGTATGATGGACTTGGATTGTTGACTGTGTCTGCAACATTACCTTATTCCAGCACTTCTGCCTGCCAACAGACAGAAAACCGTGTCCCATGTTCCCCCAGTCTCGTCCACGTAGTTTTATTTTTCTTCTCCTTATATATTGTGGCATTTGCTCAAGGGGGACATAAGCCTTGCGTCCAAGCTTTCGGAGCCGATCAATTTGATGGACAACATCCAGAAGAGAGAAAAGCTAAAAGCTCTTTCTTTAATTGGTGGTACTTTGGTATCTCTGTGGCCACTTTTGCAACAGTTACTATAGTGAGCTATGTGCAAGATAACCTTAGCTGGAGTCTTGGGTTTGGCATTCCTTGTATTGCTATGACGTACAGGTACAGTAGCGAAGGAGATGTGGAAAACCCATTTGTGAGGATTGGACGGGTGTTTATCATGGCAGTACGAAATTGGCGAGTAATCTCTTCAGAAATAGCTCATGAAGAGGAAATCCTTCGCCTTTTACCGCGCCATAGCTCTCAACAGTTCAGTTGGATATGGATATCTGATATTTATAGTAAAAAGTGGGTAGAGGAATATAGGGAAGATATTTATAGCAAGTGGTTATATGTTAAGCAGTCATCAACTTTCTTTACAAAACAAGGAGTCACAATGGACAGATCAATAGTTCCTGGATTTGAAGTACCTGCTGCTTCACTTCAATCCTTTATCAGTCTGTCCATTGGCATTTCCATCCTAATATACGATTGCGAGACGTTTCACCGGGAAACCTTCTGGAAT MYDGLGLLTVSATLPYSSTSACQQTENRVPCSPSLVHVVLFFFSLYIVAFAQGGHKPCVQAFGADQFDGQHPEERKAKSSFFNWWYFGISVATFATVTIVSYVQDNLSWSLGFGIPCIAMTYRYSSEGDVENPFVRIGRVFIMAVRNWRVISSEIAHEEEILRLLPRHSSQQFSWIWISDIYSKKWVEEYREDIYSKWLYVKQSSTFFTKQGVTMDRSIVPGFEVPAASLQSFISLSIGISILIYDCETFHRETFWN Homology
BLAST of CmoCh09G013320 vs. ExPASy Swiss-Prot
Match: Q0WP01 (Protein NRT1/ PTR FAMILY 5.10 OS=Arabidopsis thaliana OX=3702 GN=NPF5.10 PE=2 SV=1) HSP 1 Score: 240.4 bits (612), Expect = 2.3e-62 Identity = 135/269 (50.19%), Postives = 173/269 (64.31%), Query Frame = 0
BLAST of CmoCh09G013320 vs. ExPASy Swiss-Prot
Match: Q9C7U1 (Protein NRT1/ PTR FAMILY 5.12 OS=Arabidopsis thaliana OX=3702 GN=NPF5.12 PE=2 SV=1) HSP 1 Score: 204.5 bits (519), Expect = 1.4e-51 Identity = 124/271 (45.76%), Postives = 161/271 (59.41%), Query Frame = 0
BLAST of CmoCh09G013320 vs. ExPASy Swiss-Prot
Match: Q8RX67 (Protein NRT1/ PTR FAMILY 5.11 OS=Arabidopsis thaliana OX=3702 GN=NPF5.11 PE=2 SV=1) HSP 1 Score: 188.0 bits (476), Expect = 1.4e-46 Identity = 115/268 (42.91%), Postives = 155/268 (57.84%), Query Frame = 0
BLAST of CmoCh09G013320 vs. ExPASy Swiss-Prot
Match: Q8VZE2 (Protein NRT1/ PTR FAMILY 5.14 OS=Arabidopsis thaliana OX=3702 GN=NPF5.14 PE=2 SV=2) HSP 1 Score: 187.6 bits (475), Expect = 1.8e-46 Identity = 113/273 (41.39%), Postives = 149/273 (54.58%), Query Frame = 0
BLAST of CmoCh09G013320 vs. ExPASy Swiss-Prot
Match: Q0WSZ6 (Protein NRT1/ PTR FAMILY 5.13 OS=Arabidopsis thaliana OX=3702 GN=NPF5.13 PE=2 SV=2) HSP 1 Score: 187.6 bits (475), Expect = 1.8e-46 Identity = 114/277 (41.16%), Postives = 153/277 (55.23%), Query Frame = 0
BLAST of CmoCh09G013320 vs. ExPASy TrEMBL
Match: A0A6J1EC52 (protein NRT1/ PTR FAMILY 5.10-like isoform X1 OS=Cucurbita moschata OX=3662 GN=LOC111432711 PE=3 SV=1) HSP 1 Score: 398.3 bits (1022), Expect = 2.5e-107 Identity = 213/280 (76.07%), Postives = 221/280 (78.93%), Query Frame = 0
BLAST of CmoCh09G013320 vs. ExPASy TrEMBL
Match: A0A6J1EF43 (uncharacterized protein LOC111432711 isoform X3 OS=Cucurbita moschata OX=3662 GN=LOC111432711 PE=3 SV=1) HSP 1 Score: 398.3 bits (1022), Expect = 2.5e-107 Identity = 213/280 (76.07%), Postives = 221/280 (78.93%), Query Frame = 0
BLAST of CmoCh09G013320 vs. ExPASy TrEMBL
Match: A0A6J1EBM5 (uncharacterized protein LOC111432711 isoform X2 OS=Cucurbita moschata OX=3662 GN=LOC111432711 PE=3 SV=1) HSP 1 Score: 398.3 bits (1022), Expect = 2.5e-107 Identity = 213/280 (76.07%), Postives = 221/280 (78.93%), Query Frame = 0
BLAST of CmoCh09G013320 vs. ExPASy TrEMBL
Match: A0A6J1IA30 (protein NRT1/ PTR FAMILY 5.10-like OS=Cucurbita maxima OX=3661 GN=LOC111472584 PE=3 SV=1) HSP 1 Score: 382.9 bits (982), Expect = 1.1e-102 Identity = 206/275 (74.91%), Postives = 214/275 (77.82%), Query Frame = 0
BLAST of CmoCh09G013320 vs. ExPASy TrEMBL
Match: A0A6J1IG54 (protein NRT1/ PTR FAMILY 5.10-like OS=Cucurbita maxima OX=3661 GN=LOC111472583 PE=3 SV=1) HSP 1 Score: 336.7 bits (862), Expect = 8.8e-89 Identity = 183/275 (66.55%), Postives = 203/275 (73.82%), Query Frame = 0
BLAST of CmoCh09G013320 vs. TAIR 10
Match: AT1G22540.1 (Major facilitator superfamily protein ) HSP 1 Score: 240.4 bits (612), Expect = 1.7e-63 Identity = 135/269 (50.19%), Postives = 173/269 (64.31%), Query Frame = 0
BLAST of CmoCh09G013320 vs. TAIR 10
Match: AT1G72140.1 (Major facilitator superfamily protein ) HSP 1 Score: 204.5 bits (519), Expect = 1.0e-52 Identity = 124/271 (45.76%), Postives = 161/271 (59.41%), Query Frame = 0
BLAST of CmoCh09G013320 vs. TAIR 10
Match: AT1G72130.1 (Major facilitator superfamily protein ) HSP 1 Score: 188.0 bits (476), Expect = 9.7e-48 Identity = 115/268 (42.91%), Postives = 155/268 (57.84%), Query Frame = 0
BLAST of CmoCh09G013320 vs. TAIR 10
Match: AT1G72120.1 (Major facilitator superfamily protein ) HSP 1 Score: 187.6 bits (475), Expect = 1.3e-47 Identity = 113/273 (41.39%), Postives = 149/273 (54.58%), Query Frame = 0
BLAST of CmoCh09G013320 vs. TAIR 10
Match: AT1G72125.1 (Major facilitator superfamily protein ) HSP 1 Score: 187.6 bits (475), Expect = 1.3e-47 Identity = 114/277 (41.16%), Postives = 153/277 (55.23%), Query Frame = 0
The following BLAST results are available for this feature:
InterPro
Analysis Name: InterPro Annotations of Cucurbita moschata (Rifu) v1
Date Performed: 2021-10-25
Relationships
The following mRNA feature(s) are a part of this gene:
GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
|