CmoCh09G012740 (gene) Cucurbita moschata (Rifu) v1

Overview


Name	CmoCh09G012740
Type	gene
Organism	Cucurbita moschata (Cucurbita moschata (Rifu) v1)
Description	far upstream element-binding protein 1-like
Location	Cmo_Chr09: 11154371 .. 11160784 (+)
RNA-Seq Expression	CmoCh09G012740
Synteny	CmoCh09G012740

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonfive_prime_UTRCDSpolypeptide

Hold the cursor over a type above to highlight its positions in the sequence below.

AAGAATTACGTATACCGCACATCCGTCTTAGTGTATCGTATCCTTTTGCTCTCACGGTTTTCTCCTCTCCTCTTGAACCCTAGATTCGATCTCCCTCGCCAGCCACCACCCAGGGCTTTTGGAGGAACACAACACTACTTCGATTCGCCTTTCTTGGTCACCACATGGCGGAGGAAGTTGTTGTAGCTACCGGAGTGGCGAGCCCCGAGCCCTTGGATCACAAGCGGAAGCTTGCAGATTTGGACAGTGAACCCATTGATGAAGCCCCCACGGAGAATAATGGCGAGGAGTCTACTGCTCCTGACAGCTCCGACGTTGCCACTTCTGACGAATCCGAGGCCAAGCGCCTTCGGCTCGACGGGGAGTCCGAGGAAAATGGTATTTTTCTTTTTCTTTCTTCCTTGCGTATTGTAGCAATTTGAGGTAATTTCAGCTTTTGTCTTCTTGAAATCCATGGAGATATTGAATGTGTATTTGTGGATTTTGTTTGTCTCTTTCCGTCTACTTCTTCAAGTACCTGGTAGCTGCTAGCGGAAAATGCTGGACGATTTTTCTAGTGCCCAAATTGTTGGTGTGTCCTAGTTTGACATGTGTTAGACATGGACACAGCGGCCTATGCTTCATAGATTCTTGTATTTTAAGCTTTGTTTCTGGCAGATAATGTAATTCTACCATAGATAATGTAAGGACAGGGAGAATGAAAGTGAACATTATTTTGGATATAGAAATCACATAATTCTCCTCTTGGAAAAGCTGATGTTTTCCATTATCTGGCTGGCCTAAGTGCATATTTTCTTGATTAGATGGAGAAATTTCCAGCCAACACATGTTAATAATTCAACCCCTTTCTAACTAGGTGTTAAAAATTGTTTCTGTGTTATTATGTTGGATATATAATTTGAGTTTTCAAAATTGGATTATGGTTGAACAGGTTCTTCGGTGATATGCTTAATAAGAATTTCACCCTTCTGTGTTGTTCGTGATAATTTATTGTTATACTCTTGATAATGCGATCGATGGTTCATGAAAGTAATATATCTGTGTTGTTTGTGATAATTTATTGTTATACTCTTGATAATGCGATCGATGGTTCATGAAAGTAATATATGATTTTATATTCTTTCTCTGAAGTACAATATCTTCGTGTTTTGTTTTCTTCTACAGCTAGTGAGAACGGGCATCAAGAAAAGAAGCCAGAAGAGCTGGCTAAGGAAGATGGTAATCAATCATCTCAAGAGGAACAACCTGCTTCATTGGAGGAGGTACCTGAAAAAGAGGAAGCTGAACAACTCACTTCAGAGCCTCACGAAGCAGGTGATACACAGGATTCTGCTGCTGAAATCTCTCAGGATGACAAAACTCAAGAACTCTCCAAGGAAGAAAGTCAACCTCCAGAAGTGGAGGCTGCACTGCCACTGAAGGAGAATGCTTCGAATGCTGAGCAAGATCAACCTTCATCTGGGGCCGAAACAACAACATACAGAATGGAAGTTCCTAACAGTAAGGTGCGAACTTGTGAGATATTTAATTTTAATCCTAGGATTGTTGTCCAAGCTTGACACGCGGTTTGTTTATATGTTTTTTAAACAATATTTTTCCAGCCTTTGCCTCAAGTTAACGATATTAATTATTTTTTATGGTTAAATTACAAGGTTGGTCCTTGAACTTTTAGAGGTGTATCTAGTAGGTTTAGGGTTTAGGGTTTATGACAGTGAACAAACTGGAAAAATCCTAATTTTTAATGTTGTATCTAATAGGGTTCTCAATAAGGTTATTAAGTTTATGAATTTTCAGTGTTATGTCTTATAGTTTGTTGACTGATGATATGTTTCTTAAAGTTCAAGGGTCCATCAGACACCAAATTAGTTGTTTAGGAATGTATTAGTCACTTTTTTAAAGTTCCGGGCCTATTAGATATTTTTTAAAGTTTAGCAGGAATCTATTAGATACAACTTTGAAAGTTCAAAGACCTTAATTATAATATAACCTTGATAGAGGAATGCTGCAAGTGGAATGGTGAGGCCTGCCTTTCTTTCGAACTTTCTAATTATTCTTTCAATGGAATGCTTGAATAAAGATGGACGAATTCTGAAGAAAACATGGCCTGAATGTTAAAATATTTACTTCTCGTCCAACTACAAATATGGCTAGAATTGCATATGACAAATTGTTGGCCTATTTACTGCAGGTAGGTGTTCTCATTGGCAAGGCTGGTGATACAATTAGATACTTGCAGTACAATTCTGGTGCGAAGATTCAAATCATGAGGGATGCAGAAGTTGATCCCAATTGTGTAACTAGACCTGTAGAATTAATTGGAACTTCGGAAAATATAAAGAAGGCAGAGGAGTTGATTAATGCTGTGATTGCAGAGGTTTACTTTTTTTATATTGTTTTTATTTTTTCTGCCATTCTCCTTGCATCTTTGTCCAGTTCTCTTAATTTTTTCCAGTAACCCAGTATTATTTTTCAGTTAATCATTGTTTAGCATCTGTTGGAAGTTCATTGTCTTGGTATTGACTTCTCGATTAAATTTTATTTTCTCATAGGCTGATGCTGGTGGATCTCCATCCCTTATAGCCAAAGGCCTTACTTCATTGCATTCTATAGCAACTGCTGAACAGATTCAGTTACAAGTTCCAAATGAAAAGGTTGGCATCCATATTTAAGTGGTTATTTTATCAACTTGTTCTGCCAACCACTTACCTGAAATTTCTATTGCCTAGGTTGGTTTAATTATAGGAAAAGGTGGGGAGACTATTAAAAGTCTGCAGACCAGATCTGGGGCACGTATACAGGTAGTTGATACGTTGCAAGTCTATCTTTATGGTACATGTTCATTTATTTTTATGATTTAATATCACCATCATTTATGATTTATTTGTTTTCCATGTAGTTGATACCCCAAAATCTTCCAGAAGGAGATGTGTCCAAGGAAAAGACTATTAGAGTAACTGGTGATAGGAAGCAGGTTGAAATTGCTACAAACATGATAAAGGAAGTTATGAGTCAGGTATGCTTAAGTAGTTCACCTTTTCTCCAGACATTTTGGATTTTATATCTCTAAATCTTTGCTTGAAATTTGATGCTTGGTATCATAAATGCTTTTAGTATATACATATGTATATTCGCCAATACTTCCATGAATTGTGCTTACTTTTCTTGTTATTATTATTTTTTGGGCTTGAATTATTAGTCTGTACTTTCTATTTCATACATAAGGTCACTGTCTATGATCACGTTCTTATCTAAATGGCTCCATCTTTTGGTGCATAAGTTCTATTTTACGTTACTTCCATTCACTAATGAATATTAAGTCATATGCTGATTGGTGATTTACATTCCCTTATGCAATTTTATTATATACAGCGGTTTTGCTATTATTGATACTTAATCGTACTTGTAAGTCTTGTCTGAGACTAGAGATAAGGTGTTGAATTAACAACGTTAGATTGTACTACAGGCGAATCTGCCCAGTGTTAAAGAAGTGAATATTAGCATCTATATGCTATTTGATATAGTTCTAGCTGTGGAAAGTGTTATACATTTTTATTCACTTGATGACATTGATGGATCAGTACTAGATTCTTTTCAATCATGCTGGTTGAGTATATAAATTCGACCTGGTTTAACAATCACTTCTATGGGAAACAGTATGCAGATTTTGTTTGGTATAATGTTTTTTAATGGGATTGGGGAAATCTCTTGACTGGTGATCCGTCCTAATAGCTTGTGAAATCAATGAATGGTCTATGAAAAGATGACATGAATGTTCTAGGAAAGATCGTATACTGAAATCCAAGATACCGGTTACCATAATTTATCTATCATAAAGGTGTCAAACTCGAATTGGTTGGCTTTAAAACTGCAGATTACAATATTGCCTTTTCCGTGGGGTCGGCATTGCTTTCTTGCTGTATCAATAGACAACTCCTATTCACTCCCATCCACTGAAGAGAGGTATCAGGCATTAAATCTCGCGATTGCAGGATGTTAATAGTTGGTAAGATTGCTTCAAGATTTCAAACTAAGAATAACTGAGTAAGAATGTATTGCATTAACCTTAGTGCTCATTAGTGGACCCATTTTCTATGCTTGAGATTGTGTTGGAAGAAAGTAATGCCTGGTTGAAGTCATGATGCTTTCCTTTGCTTGATGATGGGACCTAGTATTTATAGCTGATACCATTGCTCAGACATCATAGGCATGTAGACTTGGTGCCATGCCACCCTAACTGTACTATAGCAACAGAATCACTTTAAAACTAATGACGAACCAGTGTCAATGTACTTTTTTTTTTCCTTTGATGTATTCCCTTTTCCTGATAATCTTTCTGATGCAATGCGACATTGAAATGCACAGCATATGTTGGTACTATCGAATGAAAGAGTTACAGATTTAGTTGTAAAGTGGATGCTGATATACCTGACATCTGTTTAGTAGAATTACTATCTATTTGATGAACAGAACAACGTATGTGTGAGATGTTTGAGTACAAGTGTTAGGCTTTCTCCATGATTTCGTCGTCACTAGACTTGTTCTGCGCTTTTTCATCCCGTTTTTTGAAGAGCTTTTCAAATTTGTTAATGTGTTGCAGATTTGAGGGAATGTTTTATTAGTTGTAATTTGTCCACTTCTTCCATCTGGAATTATATATGGGCAGCTGTAATTGTCGATCATTTCCTCTAAGCTTCAGAAGCCATGCTAATCTGTGTGCTTCCTGTTCTAATATTTACGAGTTCTTTAGGCTACATGATCTCCCTGTTAACAAATTGAATGATATTAGGATGTTATGTACATGTTCCCTTGCATGCACATGGTTAAAACGATATGATGTATCTGGTATTTTTTTGGTTTGATATTCTTTAACATCATTTGTATAAATCTTTAATCTTCTTTTCATTTTTTCTTGAACATCCGAGTGGTAATTTGTTGTGTTCGTAATGTTGTAGCTTCAACTTATTTTATAGGACTTGTATGTTTCCAGGGCTCTCATCAATGATTTTGAACAAGAGATTTCAATCACCAAGTTCAAGCTGTTCATTTTCTTAAGTTATTTTTCTATACTTGCATTATAATTGAATCTTAGAAATTTTTTTATCTGTTTACTTACCTCTTTGTTTTTGTCCTTGGAGTAGACTGTGAGGCCTTCTCCACACTCCACTGGTTTTAACCAACAGGCTTACTGGCCCCGTGGACCTGGTGGCCCGACTCAATGGGGTCAACGGGGTCCTCATCCTTCACATCCTCCAGCATATGATTATCCACACAGAGGACCTTATCCATCTCATAATACCCAGTATCAGCATCCTGCATATGGAAACTATCCTCAGCAAATGGGTGGTCCTCGAAGCAGCTACAGCTCTGGTTGGGAGCAAAGGGCACCCCGCAGCATGCAGGGGCCACCGCCGCCAAGTTCAGGTGGTTACGATTACTATGGTGGAAGAAGCCACTTTTCAGAGGCTCCACCTTCTCATTTTCCTGGTGCTATGCCGGCACATGCTCCTGGCCCTTCTCCTGCCCCGGCTCTCGGTCCACCACAAACTCAGTCCAGTTACAACTATAGCCAGCAGCAAAGTCAAGGTCATGGACATGCTGCGCCTTTTTCTCAGGCAGCTCCACATCAGAGCTATGGTCATGGATATGAACAGAAATACGACCATCATGCTCCTGCACAGAATCCATACGGTGGACACGGGAACGCTCAACAACTTTATCCACAGGCTGGTGCACAACAGGCTTACCCTGGACAACAACAGTATGATAATAAGCCTCCATCATATGGTGTTCCAGCCCAAGGACCACCTCCCCAGTCTTATGGCGCTCCGAGGGTTGGTCAGCCCGCAGAGCCTTATCAAGGTGGCTCTGCCCCAGCTTCATATGGACAAAATATGCAACCTCAACAGACATATTCATACCCAACTGGTGGTTTGACCCAGCAGTATCCTTCCTATGGCACCGTACCAAACACGGATGGTTACAATCAGGTGCCTGCTGCTTCGGCTGCTGCCAGTTACTCACAGCAGGGTGCCCAAGCAGGTTATGGTCAACCTGGTGTGCAGCAACCGTCTGCCTACAGCCAACAAGTAGCTCCTGCTGCAGCATACGCGCAGTATCCAACCTCGCAGCAGGGTTATCCGGAGCAGGCTGCTGGATATGCGACGTACCAAGCGCCACAAGATCCCACAGCATATAGTGCTGCCACAACTGCTGCTCCAGCAGCTTATACTGCTCCAGCCAGTGGGCAGCCTGGTTATACTCAACAGGCCGTTAGTCAGCCAAACTACGATCAGTCAATTCCACAATCGGGCGGGTATGGAACTGTGCCTTCAAGTGCTCCGGTAGGTTATGGGAAGAGTGTGTGACCGCAGCTGCAGCCTTGGGTATACGCAGTACGATTCTACTCAAGTCTAG

mRNA sequence

AAGAATTACGTATACCGCACATCCGTCTTAGTGTATCGTATCCTTTTGCTCTCACGGTTTTCTCCTCTCCTCTTGAACCCTAGATTCGATCTCCCTCGCCAGCCACCACCCAGGGCTTTTGGAGGAACACAACACTACTTCGATTCGCCTTTCTTGGTCACCACATGGCGGAGGAAGTTGTTGTAGCTACCGGAGTGGCGAGCCCCGAGCCCTTGGATCACAAGCGGAAGCTTGCAGATTTGGACAGTGAACCCATTGATGAAGCCCCCACGGAGAATAATGGCGAGGAGTCTACTGCTCCTGACAGCTCCGACGTTGCCACTTCTGACGAATCCGAGGCCAAGCGCCTTCGGCTCGACGGGGAGTCCGAGGAAAATGCTAGTGAGAACGGGCATCAAGAAAAGAAGCCAGAAGAGCTGGCTAAGGAAGATGGTAATCAATCATCTCAAGAGGAACAACCTGCTTCATTGGAGGAGGTACCTGAAAAAGAGGAAGCTGAACAACTCACTTCAGAGCCTCACGAAGCAGGTGATACACAGGATTCTGCTGCTGAAATCTCTCAGGATGACAAAACTCAAGAACTCTCCAAGGAAGAAAGTCAACCTCCAGAAGTGGAGGCTGCACTGCCACTGAAGGAGAATGCTTCGAATGCTGAGCAAGATCAACCTTCATCTGGGGCCGAAACAACAACATACAGAATGGAAGTTCCTAACAGTAAGGTAGGTGTTCTCATTGGCAAGGCTGGTGATACAATTAGATACTTGCAGTACAATTCTGGTGCGAAGATTCAAATCATGAGGGATGCAGAAGTTGATCCCAATTGTGTAACTAGACCTGTAGAATTAATTGGAACTTCGGAAAATATAAAGAAGGCAGAGGAGTTGATTAATGCTGTGATTGCAGAGGCTGATGCTGGTGGATCTCCATCCCTTATAGCCAAAGGCCTTACTTCATTGCATTCTATAGCAACTGCTGAACAGATTCAGTTACAAGTTCCAAATGAAAAGGTTGGTTTAATTATAGGAAAAGGTGGGGAGACTATTAAAAGTCTGCAGACCAGATCTGGGGCACGTATACAGTTGATACCCCAAAATCTTCCAGAAGGAGATGTGTCCAAGGAAAAGACTATTAGAGTAACTGGTGATAGGAAGCAGGTTGAAATTGCTACAAACATGATAAAGGAAGTTATGAGTCAGTCTGTACTTTCTATTTCATACATAAGGTCACTGTCTATGATCACGTTCTTATCTAAATGGCTCCATCTTTTGGCGAATCTGCCCAGTGTTAAAGAAGTGAATATTAGCATCTATATGCTATTTGATATAGTTCTAGCTGTGGAAAGTGTTATACATTTTTATTCACTTGATGACATTGATGGATCAGAAAGATCGTATACTGAAATCCAAGATACCGGTTACCATAATTTATCTATCATAAAGGTGTCAAACTCGAATTGGTTGGCTTTAAAACTGCAGATTACAATATTGCCTTTTCCGTGGGGTCGGCATTGCTTTCTTGCTGTATCAATAGACAACTCCTATTCACTCCCATCCACTGAAGAGAGGTATCAGGCATTAAATCTCGCGATTGCAGGATCTTCAACTTATTTTATAGGACTTACTGTGAGGCCTTCTCCACACTCCACTGGTTTTAACCAACAGGCTTACTGGCCCCGTGGACCTGGTGGCCCGACTCAATGGGGTCAACGGGGTCCTCATCCTTCACATCCTCCAGCATATGATTATCCACACAGAGGACCTTATCCATCTCATAATACCCAGTATCAGCATCCTGCATATGGAAACTATCCTCAGCAAATGGGTGGTCCTCGAAGCAGCTACAGCTCTGGTTGGGAGCAAAGGGCACCCCGCAGCATGCAGGGGCCACCGCCGCCAAGTTCAGGTGGTTACGATTACTATGGTGGAAGAAGCCACTTTTCAGAGGCTCCACCTTCTCATTTTCCTGGTGCTATGCCGGCACATGCTCCTGGCCCTTCTCCTGCCCCGGCTCTCGGTCCACCACAAACTCAGTCCAGTTACAACTATAGCCAGCAGCAAAGTCAAGGTCATGGACATGCTGCGCCTTTTTCTCAGGCAGCTCCACATCAGAGCTATGGTCATGGATATGAACAGAAATACGACCATCATGCTCCTGCACAGAATCCATACGGTGGACACGGGAACGCTCAACAACTTTATCCACAGGCTGGTGCACAACAGGCTTACCCTGGACAACAACAGTATGATAATAAGCCTCCATCATATGGTGTTCCAGCCCAAGGACCACCTCCCCAGTCTTATGGCGCTCCGAGGGTTGGTCAGCCCGCAGAGCCTTATCAAGGTGGCTCTGCCCCAGCTTCATATGGACAAAATATGCAACCTCAACAGACATATTCATACCCAACTGGTGGTTTGACCCAGCAGTATCCTTCCTATGGCACCGTACCAAACACGGATGGTTACAATCAGGTGCCTGCTGCTTCGGCTGCTGCCAGTTACTCACAGCAGGGTGCCCAAGCAGGTTATGGTCAACCTGGTGTGCAGCAACCGTCTGCCTACAGCCAACAAGTAGCTCCTGCTGCAGCATACGCGCAGTATCCAACCTCGCAGCAGGGTTATCCGGAGCAGGCTGCTGGATATGCGACGTACCAAGCGCCACAAGATCCCACAGCATATAGTGCTGCCACAACTGCTGCTCCAGCAGCTTATACTGCTCCAGCCAGTGGGCAGCCTGGTTATACTCAACAGGCCGTTAGTCAGCCAAACTACGATCAGTCAATTCCACAATCGGGCGGGTATGGAACTGTGCCTTCAAGTGCTCCGGTTATGGGAAGAGTGTGTGACCGCAGCTGCAGCCTTGGGTATACGCAGTACGATTCTACTCAAGTCTAG

Coding sequence (CDS)

ATGGCGGAGGAAGTTGTTGTAGCTACCGGAGTGGCGAGCCCCGAGCCCTTGGATCACAAGCGGAAGCTTGCAGATTTGGACAGTGAACCCATTGATGAAGCCCCCACGGAGAATAATGGCGAGGAGTCTACTGCTCCTGACAGCTCCGACGTTGCCACTTCTGACGAATCCGAGGCCAAGCGCCTTCGGCTCGACGGGGAGTCCGAGGAAAATGCTAGTGAGAACGGGCATCAAGAAAAGAAGCCAGAAGAGCTGGCTAAGGAAGATGGTAATCAATCATCTCAAGAGGAACAACCTGCTTCATTGGAGGAGGTACCTGAAAAAGAGGAAGCTGAACAACTCACTTCAGAGCCTCACGAAGCAGGTGATACACAGGATTCTGCTGCTGAAATCTCTCAGGATGACAAAACTCAAGAACTCTCCAAGGAAGAAAGTCAACCTCCAGAAGTGGAGGCTGCACTGCCACTGAAGGAGAATGCTTCGAATGCTGAGCAAGATCAACCTTCATCTGGGGCCGAAACAACAACATACAGAATGGAAGTTCCTAACAGTAAGGTAGGTGTTCTCATTGGCAAGGCTGGTGATACAATTAGATACTTGCAGTACAATTCTGGTGCGAAGATTCAAATCATGAGGGATGCAGAAGTTGATCCCAATTGTGTAACTAGACCTGTAGAATTAATTGGAACTTCGGAAAATATAAAGAAGGCAGAGGAGTTGATTAATGCTGTGATTGCAGAGGCTGATGCTGGTGGATCTCCATCCCTTATAGCCAAAGGCCTTACTTCATTGCATTCTATAGCAACTGCTGAACAGATTCAGTTACAAGTTCCAAATGAAAAGGTTGGTTTAATTATAGGAAAAGGTGGGGAGACTATTAAAAGTCTGCAGACCAGATCTGGGGCACGTATACAGTTGATACCCCAAAATCTTCCAGAAGGAGATGTGTCCAAGGAAAAGACTATTAGAGTAACTGGTGATAGGAAGCAGGTTGAAATTGCTACAAACATGATAAAGGAAGTTATGAGTCAGTCTGTACTTTCTATTTCATACATAAGGTCACTGTCTATGATCACGTTCTTATCTAAATGGCTCCATCTTTTGGCGAATCTGCCCAGTGTTAAAGAAGTGAATATTAGCATCTATATGCTATTTGATATAGTTCTAGCTGTGGAAAGTGTTATACATTTTTATTCACTTGATGACATTGATGGATCAGAAAGATCGTATACTGAAATCCAAGATACCGGTTACCATAATTTATCTATCATAAAGGTGTCAAACTCGAATTGGTTGGCTTTAAAACTGCAGATTACAATATTGCCTTTTCCGTGGGGTCGGCATTGCTTTCTTGCTGTATCAATAGACAACTCCTATTCACTCCCATCCACTGAAGAGAGGTATCAGGCATTAAATCTCGCGATTGCAGGATCTTCAACTTATTTTATAGGACTTACTGTGAGGCCTTCTCCACACTCCACTGGTTTTAACCAACAGGCTTACTGGCCCCGTGGACCTGGTGGCCCGACTCAATGGGGTCAACGGGGTCCTCATCCTTCACATCCTCCAGCATATGATTATCCACACAGAGGACCTTATCCATCTCATAATACCCAGTATCAGCATCCTGCATATGGAAACTATCCTCAGCAAATGGGTGGTCCTCGAAGCAGCTACAGCTCTGGTTGGGAGCAAAGGGCACCCCGCAGCATGCAGGGGCCACCGCCGCCAAGTTCAGGTGGTTACGATTACTATGGTGGAAGAAGCCACTTTTCAGAGGCTCCACCTTCTCATTTTCCTGGTGCTATGCCGGCACATGCTCCTGGCCCTTCTCCTGCCCCGGCTCTCGGTCCACCACAAACTCAGTCCAGTTACAACTATAGCCAGCAGCAAAGTCAAGGTCATGGACATGCTGCGCCTTTTTCTCAGGCAGCTCCACATCAGAGCTATGGTCATGGATATGAACAGAAATACGACCATCATGCTCCTGCACAGAATCCATACGGTGGACACGGGAACGCTCAACAACTTTATCCACAGGCTGGTGCACAACAGGCTTACCCTGGACAACAACAGTATGATAATAAGCCTCCATCATATGGTGTTCCAGCCCAAGGACCACCTCCCCAGTCTTATGGCGCTCCGAGGGTTGGTCAGCCCGCAGAGCCTTATCAAGGTGGCTCTGCCCCAGCTTCATATGGACAAAATATGCAACCTCAACAGACATATTCATACCCAACTGGTGGTTTGACCCAGCAGTATCCTTCCTATGGCACCGTACCAAACACGGATGGTTACAATCAGGTGCCTGCTGCTTCGGCTGCTGCCAGTTACTCACAGCAGGGTGCCCAAGCAGGTTATGGTCAACCTGGTGTGCAGCAACCGTCTGCCTACAGCCAACAAGTAGCTCCTGCTGCAGCATACGCGCAGTATCCAACCTCGCAGCAGGGTTATCCGGAGCAGGCTGCTGGATATGCGACGTACCAAGCGCCACAAGATCCCACAGCATATAGTGCTGCCACAACTGCTGCTCCAGCAGCTTATACTGCTCCAGCCAGTGGGCAGCCTGGTTATACTCAACAGGCCGTTAGTCAGCCAAACTACGATCAGTCAATTCCACAATCGGGCGGGTATGGAACTGTGCCTTCAAGTGCTCCGGTTATGGGAAGAGTGTGTGACCGCAGCTGCAGCCTTGGGTATACGCAGTACGATTCTACTCAAGTCTAG

Protein sequence

MAEEVVVATGVASPEPLDHKRKLADLDSEPIDEAPTENNGEESTAPDSSDVATSDESEAKRLRLDGESEENASENGHQEKKPEELAKEDGNQSSQEEQPASLEEVPEKEEAEQLTSEPHEAGDTQDSAAEISQDDKTQELSKEESQPPEVEAALPLKENASNAEQDQPSSGAETTTYRMEVPNSKVGVLIGKAGDTIRYLQYNSGAKIQIMRDAEVDPNCVTRPVELIGTSENIKKAEELINAVIAEADAGGSPSLIAKGLTSLHSIATAEQIQLQVPNEKVGLIIGKGGETIKSLQTRSGARIQLIPQNLPEGDVSKEKTIRVTGDRKQVEIATNMIKEVMSQSVLSISYIRSLSMITFLSKWLHLLANLPSVKEVNISIYMLFDIVLAVESVIHFYSLDDIDGSERSYTEIQDTGYHNLSIIKVSNSNWLALKLQITILPFPWGRHCFLAVSIDNSYSLPSTEERYQALNLAIAGSSTYFIGLTVRPSPHSTGFNQQAYWPRGPGGPTQWGQRGPHPSHPPAYDYPHRGPYPSHNTQYQHPAYGNYPQQMGGPRSSYSSGWEQRAPRSMQGPPPPSSGGYDYYGGRSHFSEAPPSHFPGAMPAHAPGPSPAPALGPPQTQSSYNYSQQQSQGHGHAAPFSQAAPHQSYGHGYEQKYDHHAPAQNPYGGHGNAQQLYPQAGAQQAYPGQQQYDNKPPSYGVPAQGPPPQSYGAPRVGQPAEPYQGGSAPASYGQNMQPQQTYSYPTGGLTQQYPSYGTVPNTDGYNQVPAASAAASYSQQGAQAGYGQPGVQQPSAYSQQVAPAAAYAQYPTSQQGYPEQAAGYATYQAPQDPTAYSAATTAAPAAYTAPASGQPGYTQQAVSQPNYDQSIPQSGGYGTVPSSAPVMGRVCDRSCSLGYTQYDSTQV

Homology

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BLAST of CmoCh09G012740 vs. ExPASy Swiss-Prot
Match: Q32PX7 (Far upstream element-binding protein 1 OS=Rattus norvegicus OX=10116 GN=Fubp1 PE=1 SV=1)

HSP 1 Score: 85.5 bits (210), Expect = 3.4e-15
Identity = 64/205 (31.22%), Postives = 105/205 (51.22%), Query Frame = 0


Query: 138 QELSKEESQPPEVEAALPLKENASNAEQDQPSSGAETTTYRMEVPNSKVGVLIGKAGDTI 197
           Q+   E+   P+ +   P  ++                T   +VP+  VG +IG+ G+ I
Sbjct: 59  QKRPLEDGDQPDAKKVPPQNDSFGAQLPPMHQQQRSVMTEEYKVPDGMVGFIIGRGGEQI 118

Query: 198 RYLQYNSGAKIQIMRDAEVDPNCVTRPVELIGTSENIKKAEELINAVIAEADAGGSPSLI 257
             +Q  SG KIQI  D+   P    R   L GT E+++ A+ L++ ++ +    G P   
Sbjct: 119 SRIQQESGCKIQIAPDSGGLPE---RSCMLTGTPESVQSAKRLLDQIVEK----GRP--- 178

Query: 258 AKGLTSLHSIATAEQIQLQVPNEKVGLIIGKGGETIKSLQTRSGARIQLIPQNLPEGDVS 317
           A G         A Q ++ +P  K GL+IGKGGETIK LQ R+G ++ +I Q+ P+ +  
Sbjct: 179 APGFHHGDGPGNAVQ-EIMIPASKAGLVIGKGGETIKQLQERAGVKMVMI-QDGPQ-NTG 238

Query: 318 KEKTIRVTGDRKQVEIATNMIKEVM 343
            +K +R+TGD  +V+ A  M+ E++
Sbjct: 239 ADKPLRITGDPYKVQQAKEMVLELI 250

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BLAST of CmoCh09G012740 vs. ExPASy Swiss-Prot
Match: Q92945 (Far upstream element-binding protein 2 OS=Homo sapiens OX=9606 GN=KHSRP PE=1 SV=4)

HSP 1 Score: 66.6 bits (161), Expect = 1.6e-09
Identity = 152/614 (24.76%), Postives = 235/614 (38.27%), Query Frame = 0


Query: 168 PSSGAETTTYRMEVPNSKVGVLIGKAGDTIRYLQYNSGAKIQIMRDAEVDPNCVTRPVEL 227
           P   + T  YR  VP+  VG++IG+ G+ I  +Q +SG K+QI  D+   P    R V L
Sbjct: 140 PPRTSMTEEYR--VPDGMVGLIIGRGGEQINKIQQDSGCKVQISPDSGGLPE---RSVSL 199

Query: 228 IGTSENIKKAEELINAVIAEADAGGSPSLIAKGLTSLHSIATAEQ----IQLQVPNEKVG 287
            G  E+++KA+ +++ +++    GG P          H  A   Q     ++ +P  K G
Sbjct: 200 TGAPESVQKAKMMLDDIVSRG-RGGPPG-------QFHDNANGGQNGTVQEIMIPAGKAG 259

Query: 288 LIIGKGGETIKSLQTRSGARIQLIPQNLPEGDVSKEKTIRVTGDRKQVEIATNMIKEVMS 347
           L+IGKGGETIK LQ R+G ++ LI       +V  +K +R+ GD  +V+ A  M+ +++ 
Sbjct: 260 LVIGKGGETIKQLQERAGVKMILIQDGSQNTNV--DKPLRIIGDPYKVQQACEMVMDILR 319

Query: 348 Q-----------------SVLSISYIRSLSMITFLSKWLHLLANLPSVKEVNISIYMLFD 407
           +                   + +   R  S+   + +   ++  + +  +  + I    D
Sbjct: 320 ERDQGGFGDRNEYGSRIGGGIDVPVPRH-SVGVVIGRSGEMIKKIQN--DAGVRIQFKQD 379

Query: 408 IVLAVESVIHFYSLDDIDGSERSYTEIQDTGYHNLSIIKV-------------------- 467
                E + H   +   D  E +   I D     L  ++                     
Sbjct: 380 DGTGPEKIAHI--MGPPDRCEHAARIINDL----LQSLRSGPPGPPGGPGMPPGGRGRGR 439

Query: 468 SNSNWLALKLQITILPFPWGRH-CFLAVSI--DNSYSLPSTEERYQALNLAI-AGSSTYF 527
              NW     ++T   F    H C L +    +N  ++      +  ++  +       F
Sbjct: 440 GQGNWGPPGGEMT---FSIPTHKCGLVIGRGGENVKAINQQTGAFVEISRQLPPNGDPNF 499

Query: 528 IGLTVRPSPHSTGFNQQAYWPR----------GPGGPTQWGQRGPHPSHP----PAYDYP 587
               +R SP      +Q    +          GPGGP   G  GP    P    P    P
Sbjct: 500 KLFIIRGSPQQIDHAKQLIEEKIEGPLCPVGPGPGGPGPAGPMGPFNPGPFNQGPPGAPP 559

Query: 588 HRGPYPSHNTQYQHPAYGN-YPQQMGGPRSSYSSGWEQRAP----RSMQGPPPPSSGGYD 647
           H G  P H  QY    +GN YPQ            W+  AP    ++      P++    
Sbjct: 560 HAGGPPPH--QYPPQGWGNTYPQ------------WQPPAPHDPSKAAAAAADPNAAWAA 619

Query: 648 YYGGRSHFSEAPPSHFPGAMPAHAPGPSPA-PALGPPQTQSSYNYS-QQQSQGHGHAAPF 707
           YY   SH+ + PP   PG  PA A  P+   P   PP  QS Y  + ++  +  G     
Sbjct: 620 YY---SHYYQQPPGPVPGPAPAPAAPPAQGEPPQPPPTGQSDYTKAWEEYYKKIGQQPQQ 679

Query: 708 SQAAPHQSYGHGYEQKYDHHAPAQNPYGGHGNAQQLYPQAGAQQA--YPGQQQYDNKPPS 714
             A P Q Y   +E+ Y   A      GG G      P   A  A  Y  Q  Y  + P 
Sbjct: 680 PGAPPQQDYTKAWEEYYKKQAQVATG-GGPGAPPGSQPDYSAAWAEYYRQQAAYYGQTPG 706

[Close]

BLAST of CmoCh09G012740 vs. ExPASy Swiss-Prot
Match: Q3U0V1 (Far upstream element-binding protein 2 OS=Mus musculus OX=10090 GN=Khsrp PE=1 SV=2)

HSP 1 Score: 65.5 bits (158), Expect = 3.6e-09
Identity = 153/624 (24.52%), Postives = 237/624 (37.98%), Query Frame = 0


Query: 168 PSSGAETTTYRMEVPNSKVGVLIGKAGDTIRYLQYNSGAKIQIMRDAEVDPNCVTRPVEL 227
           P   + T  YR  VP+  VG++IG+ G+ I  +Q +SG K+QI  D+   P    R V L
Sbjct: 141 PPRTSMTEEYR--VPDGMVGLIIGRGGEQINKIQQDSGCKVQISPDSGGLPE---RSVSL 200

Query: 228 IGTSENIKKAEELINAVIAEADAGGSPSLIAKGLTSLHSIATAEQ----IQLQVPNEKVG 287
            G  E+++KA+ +++ +++    GG P          H  A   Q     ++ +P  K G
Sbjct: 201 TGAPESVQKAKMMLDDIVSRG-RGGPPG-------QFHDNANGGQNGTVQEIMIPAGKAG 260

Query: 288 LIIGKGGETIKSLQTRSGARIQLIPQNLPEGDVSKEKTIRVTGDRKQVEIATNMIKEVMS 347
           L+IGKGGETIK LQ R+G ++ LI       +V  +K +R+ GD  +V+ A  M+ +++ 
Sbjct: 261 LVIGKGGETIKQLQERAGVKMILIQDGSQNTNV--DKPLRIIGDPYKVQQACEMVMDILR 320

Query: 348 Q-----------------SVLSISYIRSLSMITFLSKWLHLLANLPSVKEVNISIYMLFD 407
           +                   + +   R  S+   + +   ++  + +  +  + I    D
Sbjct: 321 ERDQGGFGDRNEYGSRVGGGIDVPVPRH-SVGVVIGRSGEMIKKIQN--DAGVRIQFKQD 380

Query: 408 IVLAVESVIHFYSLDDIDGSERSYTEIQDTGYHNLSIIKV-------------------- 467
                E + H   +   D  E +   I D     L  ++                     
Sbjct: 381 DGTGPEKIAHI--MGPPDRCEHAARIINDL----LQSLRSGPPGPPGAPGMPPGGRGRGR 440

Query: 468 SNSNWLALKLQITILPFPWGRH-CFLAVSI--DNSYSLPSTEERYQALNLAI-AGSSTYF 527
              NW     ++T   F    H C L +    +N  ++      +  ++  +       F
Sbjct: 441 GQGNWGPPGGEMT---FSIPTHKCGLVIGRGGENVKAINQQTGAFVEISRQLPPNGDPNF 500

Query: 528 IGLTVRPSPHSTGFNQQAYWPR----------GPGGPTQWGQRGPHPSHP----PAYDYP 587
               +R SP      +Q    +          GPGGP   G  GP    P    P    P
Sbjct: 501 KLFVIRGSPQQIDHAKQLIEEKIEGPLCPVGPGPGGPGPAGPMGPFNPGPFNQGPPGAPP 560

Query: 588 HRGPYPSHNTQYQHPAYGN-YPQQMGGPRSSYSSGWEQRAP----RSMQGPPPPSSGGYD 647
           H G  P H  QY    +GN YPQ            W+  AP    ++      P++    
Sbjct: 561 HAGGPPPH--QYPPQGWGNTYPQ------------WQPPAPHDPNKAAAAATDPNAAWAA 620

Query: 648 YYGGRSHFSEAPPSHFPGAMPAHAPGPSPA-PALGPPQTQSSYNYS-QQQSQGHGHAAPF 707
           YY   SH+ + PP   PG  PA A  P+   P   PP  QS Y  + ++  +  G     
Sbjct: 621 YY---SHYYQQPPGPVPGPAPAPAAPPAQGEPPQPPPTGQSDYTKAWEEYYKKIGQQPQQ 680

Query: 708 SQAAPHQSYGHGYEQKYDHHAPAQNPYGGHGNAQQLYPQAGAQQA--YPGQQQYDNKPPS 724
             A P Q Y   +E+ Y   A      GG G      P   A  A  Y  Q  Y  + P 
Sbjct: 681 PGAPPQQDYTKAWEEYYKKQAQVATG-GGPGAPPGSQPDYSAAWAEYYRQQAAYYGQTPG 717

[Close]

BLAST of CmoCh09G012740 vs. ExPASy Swiss-Prot
Match: Q8UVD9 (Far upstream element-binding protein 2 OS=Gallus gallus OX=9031 GN=KHSRP PE=1 SV=1)

HSP 1 Score: 63.9 bits (154), Expect = 1.1e-08
Identity = 149/605 (24.63%), Postives = 234/605 (38.68%), Query Frame = 0


Query: 168 PSSGAETTTYRMEVPNSKVGVLIGKAGDTIRYLQYNSGAKIQIMRDAEVDPNCVTRPVEL 227
           P   + T T    VP+  VG++IG+ G+ I  +Q +SG K+QI  D+   P    R V L
Sbjct: 202 PPPRSTTVTEEYRVPDGMVGLIIGRGGEQINKIQQDSGCKVQISPDSGGLPE---RSVSL 261

Query: 228 IGTSENIKKAEELINAVIAEADAGGSPSLIAKGLTSLHSIATAEQ---IQLQVPNEKVGL 287
            G+ E ++KA+ +++ +++    GG P          H  A  +     ++ +P  K GL
Sbjct: 262 TGSPEAVQKAKLMLDDIVSRG-RGGPPG-------QFHDYANGQNGTVQEIMIPAGKAGL 321

Query: 288 IIGKGGETIKSLQTRSGARIQLIPQNLPEGDVSKEKTIRVTGDRKQVEIATNMIKEVMSQ 347
           +IGKGGETIK LQ R+G ++  I       +V  +K +R+ GD  +V+ A  M+ +++ +
Sbjct: 322 VIGKGGETIKQLQERAGVKMIFIQDGSQNTNV--DKPLRIIGDPYKVQQACEMVMDILRE 381

Query: 348 SVLSISYIRSLSMITFLSKWLHLLANLPSV----KEVNISIYMLFDIVLAVES---VIHF 407
                   R        +++   +     V      V + I    +++  +++   V   
Sbjct: 382 --------RDQGGFGDRNEYGSRIGGGIDVPVPRHSVGVVIGRSGEMIKKIQNDAGVRIQ 441

Query: 408 YSLDDIDGSERSYTEIQDTGYHNLSIIKVSNSNWLALKLQITILPF----PWGRHCFLAV 467
           +  DD  G E+    I           ++ N    +L+      P     P GR      
Sbjct: 442 FKQDDGTGPEK-IAHIMGPPERCEHAARIINDLLQSLRSGPPGPPGHGMPPGGRGRGRGQ 501

Query: 468 SI------DNSYSLPSTE---------ERYQALN------------LAIAGSSTYFIGLT 527
            I      + ++S+P+ +         E  +A+N            L   G   + +   
Sbjct: 502 GIWGPPGGEMTFSIPTHKCGLVIGRGGENVKAINQQRGAFVEISRQLPPNGDPNFKL-FI 561

Query: 528 VRPSPHSTGFNQQAYWPR------------GPGGPTQWGQRGP-HPSHPPAYDYPHRGPY 587
           +R SP      +Q    +            GPGGP   G  GP  P +P  ++    G  
Sbjct: 562 IRGSPQQIEHAKQPIEEKIEGPLCPVGPGPGPGGPP--GPAGPMGPFNPGPFNQGPPGGP 621

Query: 588 PSHNTQYQHPAYGN-YPQQMGGPRSSYSSGWEQRAPRSMQGPPPPSSGGYDYYGGRSHFS 647
           P H  QY    +GN YPQ            W+  AP         +     + G  SH+ 
Sbjct: 622 PPH--QYPPQGWGNTYPQ------------WQPPAPHDPSKAAAAADPNAAWAGYYSHYY 681

Query: 648 EAPPSHFPGAMPA-HAPGPSPAPALGPPQTQSSYNYS-QQQSQGHGHAAPFSQAAPHQSY 707
           + PP   PG  PA  AP     P   PP  QS Y  + ++  +  G       A P Q Y
Sbjct: 682 QQPPGPVPGQPPAPTAPPVQGEPPQPPPTGQSDYTKAWEEYYKKIGQQPQQPGAPPQQDY 741

Query: 708 GHGYEQKYDHHAPAQNPYGGHGNAQQLYPQAGAQQA--YPGQQQYDNKPPSYGVPAQGPP 714
              +E+ Y   A      GG G      P   A  A  Y  Q  Y  + P    PA  PP
Sbjct: 742 TKAWEEYYKKQAAQVATGGGPGAPPGPQPDYSAAWAEYYRQQAAYYGQTPGAAGPA--PP 765

[Close]

BLAST of CmoCh09G012740 vs. ExPASy Swiss-Prot
Match: Q99PF5 (Far upstream element-binding protein 2 OS=Rattus norvegicus OX=10116 GN=Khsrp PE=1 SV=1)

HSP 1 Score: 61.6 bits (148), Expect = 5.2e-08
Identity = 152/626 (24.28%), Postives = 240/626 (38.34%), Query Frame = 0


Query: 168 PSSGAETTTYRMEVPNSKVGVLIGKAGDTIRYLQYNSGAKIQIMRDAEVDPNCVTRPVEL 227
           P   + T  YR  VP+  VG++IG+ G+ I  +Q +SG K+QI  D+   P    R V L
Sbjct: 141 PPRTSMTEEYR--VPDGMVGLIIGRGGEQINKIQQDSGCKVQISPDSGGLPE---RSVSL 200

Query: 228 IGTSENIKKAEELINAVIAEADAGGSPSLIAKGLTSLHSIATAEQ----IQLQVPNEKVG 287
            G  E+++KA+ +++ +++    GG P          H  A   Q     ++ +P  K G
Sbjct: 201 TGAPESVQKAKMMLDDIVSRG-RGGPPG-------QFHDNANGGQNGTVQEIMIPAGKAG 260

Query: 288 LIIGKGGETIKSLQTRSGARIQLIPQNLPEGDVSKEKTIRVTGDRKQVEIATNMIKEVMS 347
           L+IGKGGETIK LQ R+G ++ LI       +V  +K +R+ GD  +V+ A  M+ +++ 
Sbjct: 261 LVIGKGGETIKQLQERAGVKMILIQDGSQNTNV--DKPLRIIGDPYKVQQACEMVMDILR 320

Query: 348 Q-----------------SVLSISYIRSLSMITFLSKWLHLLANLPSVKEVNISIYMLFD 407
           +                   + +   R  S+   + +   ++  + +  +  + I    D
Sbjct: 321 ERDQGGFGDRNEYGSRVGGGIDVPVPRH-SVGVVIGRSGEMIKKIQN--DAGVRIQFKQD 380

Query: 408 IVLAVESVIHFYSLDDIDGSERSYTEIQDTGYHNLSIIKV-------------------- 467
                E + H   +   D  E +   I D     L  ++                     
Sbjct: 381 DGTGPEKIAHI--MGPPDRCEHAARIINDL----LQSLRSGPPGPPGAPGMPPGGRGRGR 440

Query: 468 SNSNWLALKLQITILPFPWGRH-CFLAVSI--DNSYSLPSTEERYQALNLAI-AGSSTYF 527
              NW     ++T   F    H C L +    +N  ++      +  ++  +       F
Sbjct: 441 GQGNWGPPGGEMT---FSIPTHKCGLVIGRGGENVKAINQQTGAFVEISRQLPPNGDPNF 500

Query: 528 IGLTVRPSPHSTGFNQQAYWPR----------GPGGPTQWGQRGP-HP---SHPPAYDYP 587
               +R SP      +Q    +          GPGGP   G  GP HP   +  P    P
Sbjct: 501 KLFVIRGSPQQIDHAKQLIEEKIEGPLCPVGPGPGGPGPAGPMGPFHPGPFNQGPPGAPP 560

Query: 588 HRGPYPSHNTQYQHPAYGN-YPQQMGGPRSSYSSGWEQRAP----RSMQGPPPPSSGGYD 647
           H G  P H  QY    +GN YP+            W+  AP    ++      P++    
Sbjct: 561 HAGGPPPH--QYPPQGWGNTYPE------------WQPPAPHDPNKAAAAATDPNAAWAA 620

Query: 648 YYGGRSHFSEAPPSHFPGAMPAHAPGPSPA-PALGPPQTQSSYNYS-QQQSQGHGHAAPF 707
           YY   SH+ + PP   PG  PA A  P+   P   PP  QS Y  + ++  +  G     
Sbjct: 621 YY---SHYYQQPPGPVPGPAPAPAAPPAQGEPPQPPPTGQSDYTKAWEEYYKKIGQQPQQ 680

Query: 708 SQAAPHQSYGHGYEQKYDHHAPAQNPYGGHGNAQQLYPQAGAQQA--YPGQQQYDNKPPS 726
             A P Q Y   +E+ Y   A      GG G      P   A  A  Y  Q  Y  + P 
Sbjct: 681 PGAPPQQDYTKAWEEYYKKQAQVATG-GGPGAPPGSQPDYSAAWAEYYRQQAAYYGQTPG 718

[Close]

BLAST of CmoCh09G012740 vs. ExPASy TrEMBL
Match: A0A6J1EEZ3 (far upstream element-binding protein 1-like OS=Cucurbita moschata OX=3662 GN=LOC111432672 PE=4 SV=1)

HSP 1 Score: 1364.0 bits (3529), Expect = 0.0e+00
Identity = 746/887 (84.10%), Postives = 746/887 (84.10%), Query Frame = 0


Query: 1   MAEEVVVATGVASPEPLDHKRKLADLDSEPIDEAPTENNGEESTAPDSSDVATSDESEAK 60
           MAEEVVVATGVASPEPLDHKRKLADLDSEPIDEAPTENNGEESTAPDSSDVATSDESEAK
Sbjct: 1   MAEEVVVATGVASPEPLDHKRKLADLDSEPIDEAPTENNGEESTAPDSSDVATSDESEAK 60

Query: 61  RLRLDGESEENASENGHQEKKPEELAKEDGNQSSQEEQPASLEEVPEKEEAEQLTSEPHE 120
           RLRLDGESEENASENGHQEKKPEELAKEDGNQSSQEEQPASLEEVPEKEEAEQLTSEPHE
Sbjct: 61  RLRLDGESEENASENGHQEKKPEELAKEDGNQSSQEEQPASLEEVPEKEEAEQLTSEPHE 120

Query: 121 AGDTQDSAAEISQDDKTQELSKEESQPPEVEAALPLKENASNAEQDQPSSGAETTTYRME 180
           AGDTQDSAAEISQDDKTQELSKEESQPPEVEAALPLKENASNAEQDQPSSGAETTTYRME
Sbjct: 121 AGDTQDSAAEISQDDKTQELSKEESQPPEVEAALPLKENASNAEQDQPSSGAETTTYRME 180

Query: 181 VPNSKVGVLIGKAGDTIRYLQYNSGAKIQIMRDAEVDPNCVTRPVELIGTSENIKKAEEL 240
           VPNSKVGVLIGKAGDTIRYLQYNSGAKIQIMRDAEVDPNCVTRPVELIGTSENIKKAEEL
Sbjct: 181 VPNSKVGVLIGKAGDTIRYLQYNSGAKIQIMRDAEVDPNCVTRPVELIGTSENIKKAEEL 240

Query: 241 INAVIAEADAGGSPSLIAKGLTSLHSIATAEQIQLQVPNEKVGLIIGKGGETIKSLQTRS 300
           INAVIAEADAGGSPSLIAKGLTSLHSIATAEQIQLQVPNEKVGLIIGKGGETIKSLQTRS
Sbjct: 241 INAVIAEADAGGSPSLIAKGLTSLHSIATAEQIQLQVPNEKVGLIIGKGGETIKSLQTRS 300

Query: 301 GARIQLIPQNLPEGDVSKEKTIRVTGDRKQVEIATNMIKEVMSQSVLSISYIRSLSMITF 360
           GARIQLIPQNLPEGDVSKEKTIRVTGDRKQVEIATNMIKEVMSQ                
Sbjct: 301 GARIQLIPQNLPEGDVSKEKTIRVTGDRKQVEIATNMIKEVMSQ---------------- 360

Query: 361 LSKWLHLLANLPSVKEVNISIYMLFDIVLAVESVIHFYSLDDIDGSERSYTEIQDTGYHN 420
                                                                       
Sbjct: 361 ------------------------------------------------------------ 420

Query: 421 LSIIKVSNSNWLALKLQITILPFPWGRHCFLAVSIDNSYSLPSTEERYQALNLAIAGSST 480
                                                                       
Sbjct: 421 ------------------------------------------------------------ 480

Query: 481 YFIGLTVRPSPHSTGFNQQAYWPRGPGGPTQWGQRGPHPSHPPAYDYPHRGPYPSHNTQY 540
                TVRPSPHSTGFNQQAYWPRGPGGPTQWGQRGPHPSHPPAYDYPHRGPYPSHNTQY
Sbjct: 481 -----TVRPSPHSTGFNQQAYWPRGPGGPTQWGQRGPHPSHPPAYDYPHRGPYPSHNTQY 540

Query: 541 QHPAYGNYPQQMGGPRSSYSSGWEQRAPRSMQGPPPPSSGGYDYYGGRSHFSEAPPSHFP 600
           QHPAYGNYPQQMGGPRSSYSSGWEQRAPRSMQGPPPPSSGGYDYYGGRSHFSEAPPSHFP
Sbjct: 541 QHPAYGNYPQQMGGPRSSYSSGWEQRAPRSMQGPPPPSSGGYDYYGGRSHFSEAPPSHFP 600

Query: 601 GAMPAHAPGPSPAPALGPPQTQSSYNYSQQQSQGHGHAAPFSQAAPHQSYGHGYEQKYDH 660
           GAMPAHAPGPSPAPALGPPQTQSSYNYSQQQSQGHGHAAPFSQAAPHQSYGHGYEQKYDH
Sbjct: 601 GAMPAHAPGPSPAPALGPPQTQSSYNYSQQQSQGHGHAAPFSQAAPHQSYGHGYEQKYDH 660

Query: 661 HAPAQNPYGGHGNAQQLYPQAGAQQAYPGQQQYDNKPPSYGVPAQGPPPQSYGAPRVGQP 720
           HAPAQNPYGGHGNAQQLYPQAGAQQAYPGQQQYDNKPPSYGVPAQGPPPQSYGAPRVGQP
Sbjct: 661 HAPAQNPYGGHGNAQQLYPQAGAQQAYPGQQQYDNKPPSYGVPAQGPPPQSYGAPRVGQP 720

Query: 721 AEPYQGGSAPASYGQNMQPQQTYSYPTGGLTQQYPSYGTVPNTDGYNQVPAASAAASYSQ 780
           AEPYQGGSAPASYGQNMQPQQTYSYPTGGLTQQYPSYGTVPNTDGYNQVPAASAAASYSQ
Sbjct: 721 AEPYQGGSAPASYGQNMQPQQTYSYPTGGLTQQYPSYGTVPNTDGYNQVPAASAAASYSQ 746

Query: 781 QGAQAGYGQPGVQQPSAYSQQVAPAAAYAQYPTSQQGYPEQAAGYATYQAPQDPTAYSAA 840
           QGAQAGYGQPGVQQPSAYSQQVAPAAAYAQYPTSQQGYPEQAAGYATYQAPQDPTAYSAA
Sbjct: 781 QGAQAGYGQPGVQQPSAYSQQVAPAAAYAQYPTSQQGYPEQAAGYATYQAPQDPTAYSAA 746

Query: 841 TTAAPAAYTAPASGQPGYTQQAVSQPNYDQSIPQSGGYGTVPSSAPV 888
           TTAAPAAYTAPASGQPGYTQQAVSQPNYDQSIPQSGGYGTVPSSAPV
Sbjct: 841 TTAAPAAYTAPASGQPGYTQQAVSQPNYDQSIPQSGGYGTVPSSAPV 746

[Close]

BLAST of CmoCh09G012740 vs. ExPASy TrEMBL
Match: A0A6J1IEV5 (far upstream element-binding protein 1-like OS=Cucurbita maxima OX=3661 GN=LOC111472064 PE=4 SV=1)

HSP 1 Score: 1321.6 bits (3419), Expect = 0.0e+00
Identity = 726/887 (81.85%), Postives = 733/887 (82.64%), Query Frame = 0


Query: 1   MAEEVVVATGVASPEPLDHKRKLADLDSEPIDEAPTENNGEESTAPDSSDVATSDESEAK 60
           MAEEVVVATGVASPEPLDHKRKLAD D EPIDEAPTENNGEESTAPDSSDVA SDESEAK
Sbjct: 1   MAEEVVVATGVASPEPLDHKRKLADFDREPIDEAPTENNGEESTAPDSSDVANSDESEAK 60

Query: 61  RLRLDGESEENASENGHQEKKPEELAKEDGNQSSQEEQPASLEEVPEKEEAEQLTSEPHE 120
           RLRLDGESEENASENG+QEKKPEELAKEDGNQSSQEEQPASLEEVPEKEEAEQLTSEPHE
Sbjct: 61  RLRLDGESEENASENGYQEKKPEELAKEDGNQSSQEEQPASLEEVPEKEEAEQLTSEPHE 120

Query: 121 AGDTQDSAAEISQDDKTQELSKEESQPPEVEAALPLKENASNAEQDQPSSGAETTTYRME 180
           AGD QDSAAEISQ+DKTQELSKEESQPPEVEAALPL+ENASNAEQDQPSSGAETTTYR+E
Sbjct: 121 AGDAQDSAAEISQEDKTQELSKEESQPPEVEAALPLQENASNAEQDQPSSGAETTTYRIE 180

Query: 181 VPNSKVGVLIGKAGDTIRYLQYNSGAKIQIMRDAEVDPNCVTRPVELIGTSENIKKAEEL 240
           VPNSKVGVLIGKAGDTIRYLQYNSGAKIQIMRDAEVDPNCVTRPVELIGTSENIKKAEEL
Sbjct: 181 VPNSKVGVLIGKAGDTIRYLQYNSGAKIQIMRDAEVDPNCVTRPVELIGTSENIKKAEEL 240

Query: 241 INAVIAEADAGGSPSLIAKGLTSLHSIATAEQIQLQVPNEKVGLIIGKGGETIKSLQTRS 300
           INAVIAEADAGGSPSLIAKGLTS HSIATAEQIQLQVPNEKVGLIIGKGGETIKSLQTRS
Sbjct: 241 INAVIAEADAGGSPSLIAKGLTSSHSIATAEQIQLQVPNEKVGLIIGKGGETIKSLQTRS 300

Query: 301 GARIQLIPQNLPEGDVSKEKTIRVTGDRKQVEIATNMIKEVMSQSVLSISYIRSLSMITF 360
           GARIQLIPQNLPEGDVSKEKTIRVTGDRKQ+EIATNMIKEVMSQ                
Sbjct: 301 GARIQLIPQNLPEGDVSKEKTIRVTGDRKQIEIATNMIKEVMSQ---------------- 360

Query: 361 LSKWLHLLANLPSVKEVNISIYMLFDIVLAVESVIHFYSLDDIDGSERSYTEIQDTGYHN 420
                                                                       
Sbjct: 361 ------------------------------------------------------------ 420

Query: 421 LSIIKVSNSNWLALKLQITILPFPWGRHCFLAVSIDNSYSLPSTEERYQALNLAIAGSST 480
                                                                       
Sbjct: 421 ------------------------------------------------------------ 480

Query: 481 YFIGLTVRPSPHSTGFNQQAYWPRGPGGPTQWGQRGPHPSHPPAYDYPHRGPYPSHNTQY 540
                TVRPSPHSTGFNQQAY PRGPGGPTQWGQRGPHPSHPPAYDYPHRGPYPSHNTQY
Sbjct: 481 -----TVRPSPHSTGFNQQAYRPRGPGGPTQWGQRGPHPSHPPAYDYPHRGPYPSHNTQY 540

Query: 541 QHPAYGNYPQQMGGPRSSYSSGWEQRAPRSMQGPPPPSSGGYDYYGGRSHFSEAPPSHFP 600
           QHPAYGNYPQQMGGPRSSYSSGWEQRAPRSMQGPPPPSSGGYDYYGGRSHFS+ PPSHFP
Sbjct: 541 QHPAYGNYPQQMGGPRSSYSSGWEQRAPRSMQGPPPPSSGGYDYYGGRSHFSDTPPSHFP 600

Query: 601 GAMPAHAPGPSPAPALGPPQTQSSYNYSQQQSQGHGHAAPFSQAAPHQSYGHGYEQKYDH 660
           GAMPAHAPGPSPAPALGPPQTQSSYNYSQQQSQG+GHAAPFSQAAPHQSYGHGYEQKYDH
Sbjct: 601 GAMPAHAPGPSPAPALGPPQTQSSYNYSQQQSQGYGHAAPFSQAAPHQSYGHGYEQKYDH 660

Query: 661 HAPAQNPYGGHGNAQQLYPQAGAQQAYPGQQQYDNKPPSYGVPAQGPPPQSYGAPRVGQP 720
           HAPAQNPYGGHGNAQQLYPQAGAQQAYPGQQQYDNKPPSYGVPAQG P QSYGAPRV QP
Sbjct: 661 HAPAQNPYGGHGNAQQLYPQAGAQQAYPGQQQYDNKPPSYGVPAQGLPTQSYGAPRVSQP 720

Query: 721 AEPYQGGSAPASYGQNMQPQQTYSYPTGGLTQQYPSYGTVPNTDGYNQVPAASAAASYSQ 780
           AEPYQGGSAPASYGQNMQPQQTY YPTGG TQQYPSYGTVPNTDGYNQVPAASAAASYSQ
Sbjct: 721 AEPYQGGSAPASYGQNMQPQQTYPYPTGGSTQQYPSYGTVPNTDGYNQVPAASAAASYSQ 746

Query: 781 QGAQAGYGQPGVQQPSAYSQQVAPAAAYAQYPTSQQGYPEQAAGYATYQAPQDPTAYSAA 840
           QGAQAGYGQPGVQQPSAY QQVAPAAAYAQYPTSQQGYPEQAAGYATYQAPQDPTAYSAA
Sbjct: 781 QGAQAGYGQPGVQQPSAYGQQVAPAAAYAQYPTSQQGYPEQAAGYATYQAPQDPTAYSAA 746

Query: 841 TTAAPAAYTAPASGQPGYTQQAVSQPNYDQSIPQSGGYGTVPSSAPV 888
           TTAAPAAYTAPASGQPGYTQQAVSQPNYDQSIPQSGGYGTVPSSAPV
Sbjct: 841 TTAAPAAYTAPASGQPGYTQQAVSQPNYDQSIPQSGGYGTVPSSAPV 746

[Close]

BLAST of CmoCh09G012740 vs. ExPASy TrEMBL
Match: A0A5D3BKY3 (Far upstream element-binding protein 2 OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold169G00790 PE=4 SV=1)

HSP 1 Score: 1131.7 bits (2926), Expect = 0.0e+00
Identity = 651/919 (70.84%), Postives = 685/919 (74.54%), Query Frame = 0


Query: 1   MAEEVVVATGVASPEPLDHKRKLADLDSEPIDEAPTENNGEE---STAPDSSDVATSDES 60
           MAEEVVVATG ASPEPLDHKRKLADLD+EP  EA  EN+ E    S  PD++DV  SDES
Sbjct: 1   MAEEVVVATGAASPEPLDHKRKLADLDNEP-TEAAEENHSEPIEGSADPDAADVPISDES 60

Query: 61  EAKRLRLDGESEENASENGHQEKKPEEL-AKEDGNQSSQEEQPASLEEVPEKEEAEQLTS 120
           EAKR RLDG+ + NASENGH+EKK EEL AKED  QSS+EEQPAS+E +PEKEE EQ T 
Sbjct: 61  EAKRPRLDGKPDGNASENGHEEKKEEELEAKEDYKQSSEEEQPASVEVLPEKEETEQPTE 120

Query: 121 EPHEAGDTQDSAAEISQDDKTQELSKEESQPPEVEAALPL-KENASNAEQDQPSSGAETT 180
           E HEAGD QDSAAEISQ+DKTQELSKEESQPPEVEAA PL +E+ SNAEQDQPSS +ETT
Sbjct: 121 ESHEAGDAQDSAAEISQEDKTQELSKEESQPPEVEAAPPLQEEDVSNAEQDQPSSESETT 180

Query: 181 TYRMEVPNSKVGVLIGKAGDTIRYLQYNSGAKIQIMRDAEVDPNCVTRPVELIGTSENIK 240
           TY+MEVPNSKVGVLIGKAGDTIRYLQYNSGAKIQIMRDAE DPN +TRPVE+IGTSENIK
Sbjct: 181 TYKMEVPNSKVGVLIGKAGDTIRYLQYNSGAKIQIMRDAEADPNRLTRPVEIIGTSENIK 240

Query: 241 KAEELINAVIAEADAGGSPSLIAKGLTSLHSIATAEQIQLQVPNEKVGLIIGKGGETIKS 300
           KAEELINAVIAEADAGGSPSLIA+GLTS HSIATAEQIQLQVPNEKVGLIIG+GGETIKS
Sbjct: 241 KAEELINAVIAEADAGGSPSLIARGLTSSHSIATAEQIQLQVPNEKVGLIIGRGGETIKS 300

Query: 301 LQTRSGARIQLIPQNLPEGDVSKEKTIRVTGDRKQVEIATNMIKEVMSQSVLSISYIRSL 360
           LQTRSGARIQLIPQNLPEGD SKE+TIRVTGD+KQ+EIAT+MIKEVM+Q           
Sbjct: 301 LQTRSGARIQLIPQNLPEGDESKERTIRVTGDKKQIEIATDMIKEVMNQ----------- 360

Query: 361 SMITFLSKWLHLLANLPSVKEVNISIYMLFDIVLAVESVIHFYSLDDIDGSERSYTEIQD 420
                                                                       
Sbjct: 361 ------------------------------------------------------------ 420

Query: 421 TGYHNLSIIKVSNSNWLALKLQITILPFPWGRHCFLAVSIDNSYSLPSTEERYQALNLAI 480
                                                                       
Sbjct: 421 ------------------------------------------------------------ 480

Query: 481 AGSSTYFIGLTVRPSPHSTGFNQQAYWPRGPGGPTQWGQRGPHPSHPPAYDYPHRGPYPS 540
                     TVRPSPHSTGFNQQAY PRGPGGPTQWG RGPHPSHP AYDYPHRGPYPS
Sbjct: 481 ----------TVRPSPHSTGFNQQAYRPRGPGGPTQWGHRGPHPSHPAAYDYPHRGPYPS 540

Query: 541 HNTQYQHPAYGNYPQQMGGPRSSYSSGWEQRAPRSMQGPPPPSSGGYDYYGGRSHFSEAP 600
           HNTQYQHP YGNYPQQMGGPRSSY SGWEQR P SMQG PPPSSGGYDYYG RSH+S+AP
Sbjct: 541 HNTQYQHPGYGNYPQQMGGPRSSYGSGWEQRPPPSMQG-PPPSSGGYDYYGQRSHYSDAP 600

Query: 601 PSHFPGAMPAHAPGPSPAPALGPPQTQSSYNYSQQQSQGHGHAAPFSQAAPHQSYGHGYE 660
           PSHFPGAMP+HAPGPSPAP  GPPQTQSSYNYSQQQ QG+GH AP+SQAAPHQSYGHGYE
Sbjct: 601 PSHFPGAMPSHAPGPSPAPTHGPPQTQSSYNYSQQQGQGYGHTAPYSQAAPHQSYGHGYE 660

Query: 661 QKYDHHAPAQNPYGGHGNAQQLYPQAGAQQAYPGQQQYDNKPPSYGVPAQGPPPQSYGAP 720
           QKYDHHAPAQNPYGGHGNAQ  YPQAG QQ YPG QQYDNKP SYGV  QGPPPQSYGAP
Sbjct: 661 QKYDHHAPAQNPYGGHGNAQH-YPQAGTQQVYPG-QQYDNKPSSYGVSQQGPPPQSYGAP 720

Query: 721 RVGQPAEPYQGGSAPASYGQNMQPQQTYSYPTGGLTQQYPSYGTVPNTDGYNQVPAASAA 780
           RVGQPAEPYQGGSAPA+YGQNMQPQQTY YP+GG TQQYP YG  P+TDGYNQ PAASAA
Sbjct: 721 RVGQPAEPYQGGSAPATYGQNMQPQQTYPYPSGGSTQQYPPYGAAPSTDGYNQAPAASAA 774

Query: 781 ASYSQQGAQAGYGQPGVQQPSAYSQQVAPAAAYAQYPTSQQGYPEQ-----AAGYATYQA 840
           A YSQQGAQAGY QP VQQPSAY QQVAPAAAY QYPTSQQGY EQ     AAGYA YQA
Sbjct: 781 AGYSQQGAQAGYAQPSVQQPSAYGQQVAPAAAYGQYPTSQQGYSEQAAANTAAGYAAYQA 774

Query: 841 PQDPTAYSAATTAAPAAYTAPASGQPGYTQQAVSQPNYDQSIPQSGGYGTVPSSAPV-MG 900
           PQDPTAYS AT AA AAYTAPASGQ GYTQQ  +QP YDQSI QSGGYGTVPSSAPV  G
Sbjct: 841 PQDPTAYSGATAAAAAAYTAPASGQQGYTQQTATQPTYDQSIQQSGGYGTVPSSAPVGYG 774

Query: 901 RVCDRSCSLGYTQYDSTQV 909
           +        GY QYDSTQV
Sbjct: 901 KSVSPQPQPGYPQYDSTQV 774

[Close]

BLAST of CmoCh09G012740 vs. ExPASy TrEMBL
Match: A0A1S3CA30 (far upstream element-binding protein 2 OS=Cucumis melo OX=3656 GN=LOC103498673 PE=4 SV=1)

HSP 1 Score: 1131.7 bits (2926), Expect = 0.0e+00
Identity = 651/919 (70.84%), Postives = 685/919 (74.54%), Query Frame = 0


Query: 1   MAEEVVVATGVASPEPLDHKRKLADLDSEPIDEAPTENNGEE---STAPDSSDVATSDES 60
           MAEEVVVATG ASPEPLDHKRKLADLD+EP  EA  EN+ E    S  PD++DV  SDES
Sbjct: 1   MAEEVVVATGAASPEPLDHKRKLADLDNEP-TEAAEENHSEPIEGSADPDAADVPISDES 60

Query: 61  EAKRLRLDGESEENASENGHQEKKPEEL-AKEDGNQSSQEEQPASLEEVPEKEEAEQLTS 120
           EAKR RLDG+ + NASENGH+EKK EEL AKED  QSS+EEQPAS+E +PEKEE EQ T 
Sbjct: 61  EAKRPRLDGKPDGNASENGHEEKKEEELEAKEDYKQSSEEEQPASVEVLPEKEETEQPTE 120

Query: 121 EPHEAGDTQDSAAEISQDDKTQELSKEESQPPEVEAALPL-KENASNAEQDQPSSGAETT 180
           E HEAGD QDSAAEISQ+DKTQELSKEESQPPEVEAA PL +E+ SNAEQDQPSS +ETT
Sbjct: 121 ESHEAGDAQDSAAEISQEDKTQELSKEESQPPEVEAAPPLQEEDVSNAEQDQPSSESETT 180

Query: 181 TYRMEVPNSKVGVLIGKAGDTIRYLQYNSGAKIQIMRDAEVDPNCVTRPVELIGTSENIK 240
           TY+MEVPNSKVGVLIGKAGDTIRYLQYNSGAKIQIMRDAE DPN +TRPVE+IGTSENIK
Sbjct: 181 TYKMEVPNSKVGVLIGKAGDTIRYLQYNSGAKIQIMRDAEADPNRLTRPVEIIGTSENIK 240

Query: 241 KAEELINAVIAEADAGGSPSLIAKGLTSLHSIATAEQIQLQVPNEKVGLIIGKGGETIKS 300
           KAEELINAVIAEADAGGSPSLIA+GLTS HSIATAEQIQLQVPNEKVGLIIG+GGETIKS
Sbjct: 241 KAEELINAVIAEADAGGSPSLIARGLTSSHSIATAEQIQLQVPNEKVGLIIGRGGETIKS 300

Query: 301 LQTRSGARIQLIPQNLPEGDVSKEKTIRVTGDRKQVEIATNMIKEVMSQSVLSISYIRSL 360
           LQTRSGARIQLIPQNLPEGD SKE+TIRVTGD+KQ+EIAT+MIKEVM+Q           
Sbjct: 301 LQTRSGARIQLIPQNLPEGDESKERTIRVTGDKKQIEIATDMIKEVMNQ----------- 360

Query: 361 SMITFLSKWLHLLANLPSVKEVNISIYMLFDIVLAVESVIHFYSLDDIDGSERSYTEIQD 420
                                                                       
Sbjct: 361 ------------------------------------------------------------ 420

Query: 421 TGYHNLSIIKVSNSNWLALKLQITILPFPWGRHCFLAVSIDNSYSLPSTEERYQALNLAI 480
                                                                       
Sbjct: 421 ------------------------------------------------------------ 480

Query: 481 AGSSTYFIGLTVRPSPHSTGFNQQAYWPRGPGGPTQWGQRGPHPSHPPAYDYPHRGPYPS 540
                     TVRPSPHSTGFNQQAY PRGPGGPTQWG RGPHPSHP AYDYPHRGPYPS
Sbjct: 481 ----------TVRPSPHSTGFNQQAYRPRGPGGPTQWGHRGPHPSHPAAYDYPHRGPYPS 540

Query: 541 HNTQYQHPAYGNYPQQMGGPRSSYSSGWEQRAPRSMQGPPPPSSGGYDYYGGRSHFSEAP 600
           HNTQYQHP YGNYPQQMGGPRSSY SGWEQR P SMQG PPPSSGGYDYYG RSH+S+AP
Sbjct: 541 HNTQYQHPGYGNYPQQMGGPRSSYGSGWEQRPPPSMQG-PPPSSGGYDYYGQRSHYSDAP 600

Query: 601 PSHFPGAMPAHAPGPSPAPALGPPQTQSSYNYSQQQSQGHGHAAPFSQAAPHQSYGHGYE 660
           PSHFPGAMP+HAPGPSPAP  GPPQTQSSYNYSQQQ QG+GH AP+SQAAPHQSYGHGYE
Sbjct: 601 PSHFPGAMPSHAPGPSPAPTHGPPQTQSSYNYSQQQGQGYGHTAPYSQAAPHQSYGHGYE 660

Query: 661 QKYDHHAPAQNPYGGHGNAQQLYPQAGAQQAYPGQQQYDNKPPSYGVPAQGPPPQSYGAP 720
           QKYDHHAPAQNPYGGHGNAQ  YPQAG QQ YPG QQYDNKP SYGV  QGPPPQSYGAP
Sbjct: 661 QKYDHHAPAQNPYGGHGNAQH-YPQAGTQQVYPG-QQYDNKPSSYGVSQQGPPPQSYGAP 720

Query: 721 RVGQPAEPYQGGSAPASYGQNMQPQQTYSYPTGGLTQQYPSYGTVPNTDGYNQVPAASAA 780
           RVGQPAEPYQGGSAPA+YGQNMQPQQTY YP+GG TQQYP YG  P+TDGYNQ PAASAA
Sbjct: 721 RVGQPAEPYQGGSAPATYGQNMQPQQTYPYPSGGSTQQYPPYGAAPSTDGYNQAPAASAA 774

Query: 781 ASYSQQGAQAGYGQPGVQQPSAYSQQVAPAAAYAQYPTSQQGYPEQ-----AAGYATYQA 840
           A YSQQGAQAGY QP VQQPSAY QQVAPAAAY QYPTSQQGY EQ     AAGYA YQA
Sbjct: 781 AGYSQQGAQAGYAQPSVQQPSAYGQQVAPAAAYGQYPTSQQGYSEQAAANTAAGYAAYQA 774

Query: 841 PQDPTAYSAATTAAPAAYTAPASGQPGYTQQAVSQPNYDQSIPQSGGYGTVPSSAPV-MG 900
           PQDPTAYS AT AA AAYTAPASGQ GYTQQ  +QP YDQSI QSGGYGTVPSSAPV  G
Sbjct: 841 PQDPTAYSGATAAAAAAYTAPASGQQGYTQQTATQPTYDQSIQQSGGYGTVPSSAPVGYG 774

Query: 901 RVCDRSCSLGYTQYDSTQV 909
           +        GY QYDSTQV
Sbjct: 901 KSVSPQPQPGYPQYDSTQV 774

[Close]

BLAST of CmoCh09G012740 vs. ExPASy TrEMBL
Match: A0A0A0KW47 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_5G649320 PE=4 SV=1)

HSP 1 Score: 1108.6 bits (2866), Expect = 0.0e+00
Identity = 644/927 (69.47%), Postives = 677/927 (73.03%), Query Frame = 0


Query: 1   MAEEVVVATGVASPEPLDHKRKLADLDSEPIDEAPTENNGEE---STAPDSSDVATSDES 60
           MAEEVVVATG ASPEPLDHKRKL DLDSEP  EA  EN+ E    S APD++DV  SDES
Sbjct: 1   MAEEVVVATGAASPEPLDHKRKLVDLDSEP-TEATEENHAEPIEGSAAPDAADVPISDES 60

Query: 61  EAKRLRLDGESEENASENGHQEKKPEEL-AKEDGNQSSQEEQPASLEEVPEKEEAEQLTS 120
           E KR RL+G+ E NASENGH+EKK EEL  KED  QSS+EE PAS+E +PEKE  EQ T 
Sbjct: 61  EYKRPRLEGKPEGNASENGHEEKKEEELEPKEDYKQSSEEEPPASVEVLPEKEGTEQPTE 120

Query: 121 EPHEAGDTQDSAAEISQD--------DKTQELSKEESQPPEVEAALPL-KENASNAEQDQ 180
           EPHEAGD QDSAAEISQD        DKTQELSKEESQP EVEAA PL +E+ SNAEQDQ
Sbjct: 121 EPHEAGDAQDSAAEISQDSAAEISQEDKTQELSKEESQPSEVEAAPPLQEEDISNAEQDQ 180

Query: 181 PSSGAETTTYRMEVPNSKVGVLIGKAGDTIRYLQYNSGAKIQIMRDAEVDPNCVTRPVEL 240
           PSS +ETTTY+MEVPNSKVGVLIGKAGDTIRYLQYNSGAKIQIMRDAE DPN +TRPVE+
Sbjct: 181 PSSESETTTYKMEVPNSKVGVLIGKAGDTIRYLQYNSGAKIQIMRDAEADPNRLTRPVEI 240

Query: 241 IGTSENIKKAEELINAVIAEADAGGSPSLIAKGLTSLHSIATAEQIQLQVPNEKVGLIIG 300
           IGTSENIKKAEELINAVIAEADAGGSPSLIA+GLTS HSIATAEQIQLQVPNEKVGLIIG
Sbjct: 241 IGTSENIKKAEELINAVIAEADAGGSPSLIARGLTSSHSIATAEQIQLQVPNEKVGLIIG 300

Query: 301 KGGETIKSLQTRSGARIQLIPQNLPEGDVSKEKTIRVTGDRKQVEIATNMIKEVMSQSVL 360
           +GGETIKSLQTRSGARIQLIPQNLPEGD SKE+TIRVTGD+KQ+EIAT+MIKEVM+Q   
Sbjct: 301 RGGETIKSLQTRSGARIQLIPQNLPEGDESKERTIRVTGDKKQIEIATDMIKEVMNQ--- 360

Query: 361 SISYIRSLSMITFLSKWLHLLANLPSVKEVNISIYMLFDIVLAVESVIHFYSLDDIDGSE 420
                                                                       
Sbjct: 361 ------------------------------------------------------------ 420

Query: 421 RSYTEIQDTGYHNLSIIKVSNSNWLALKLQITILPFPWGRHCFLAVSIDNSYSLPSTEER 480
                                                                       
Sbjct: 421 ------------------------------------------------------------ 480

Query: 481 YQALNLAIAGSSTYFIGLTVRPSPHSTGFNQQAYWPRGPGGPTQWGQRGPHPSHPPAYDY 540
                             TVRPSPHSTGFNQQAY PRGPGGPTQWG RGPHPSHP  YDY
Sbjct: 481 ------------------TVRPSPHSTGFNQQAYRPRGPGGPTQWGHRGPHPSHPAGYDY 540

Query: 541 PHRGPYPSHNTQYQHPAYGNYPQQMGGPRSSYSSGWEQRAPRSMQGPPPPSSGGYDYYGG 600
           PHRGPYPSHNTQYQHP YGNYPQQMGGPRSSY SGWEQR P SMQG PPPSSGGYDYYG 
Sbjct: 541 PHRGPYPSHNTQYQHPGYGNYPQQMGGPRSSYGSGWEQRPPPSMQG-PPPSSGGYDYYGQ 600

Query: 601 RSHFSEAPPSHFPGAMPAHAPGPSPAPALGPPQTQSSYNYSQQQSQGHGHAAPFSQAAPH 660
           RSH+S+APPSHFPGAMP+HAPGPSPAP  GPPQTQSSYNY+QQQ QG+GH AP+SQAAPH
Sbjct: 601 RSHYSDAPPSHFPGAMPSHAPGPSPAPTHGPPQTQSSYNYNQQQGQGYGHTAPYSQAAPH 660

Query: 661 QSYGHGYEQKYDHHAPAQNPYGGHGNAQQLYPQAGAQQAYPGQQQYDNKPPSYGVPAQGP 720
           QSYGHGYEQKYDHHAPAQNPY GHGNAQ  YPQAG QQ YPG QQYDNKP SYGV  QGP
Sbjct: 661 QSYGHGYEQKYDHHAPAQNPYSGHGNAQH-YPQAGTQQVYPG-QQYDNKPSSYGVSQQGP 720

Query: 721 PPQSYGAPRVGQPAEPYQGGSAPASYGQNMQPQQTYSYPTGGLTQQYPSYGTVPNTDGYN 780
           PPQSYGAPRVGQPAEPYQGGSAPA+YGQNMQPQQTY Y +GG TQQYP YG  P+TDGYN
Sbjct: 721 PPQSYGAPRVGQPAEPYQGGSAPATYGQNMQPQQTYPYQSGGSTQQYPPYGAAPSTDGYN 780

Query: 781 QVPAASAAASYSQQGAQAGYGQPGVQQPSAYSQQVAPAAAYAQYPTSQQGYPEQ-----A 840
           Q PAASAAA YSQQGAQAGYGQP VQQPSAY QQVAPAAAY QYPTSQQGY EQ     A
Sbjct: 781 QAPAASAAAGYSQQGAQAGYGQPSVQQPSAYGQQVAPAAAYGQYPTSQQGYSEQAAANTA 782

Query: 841 AGYATYQAPQDPTAYSAATTAAPAAYTAPASGQPGYTQQAVSQPNYDQSIPQSGGYGTVP 900
           AGYA YQAPQDP AYS  T AA AAYTAPASGQ GYTQQ  +QP YDQSI QSGGYGTVP
Sbjct: 841 AGYAAYQAPQDPAAYSGGTAAAAAAYTAPASGQQGYTQQTATQPTYDQSIQQSGGYGTVP 782

Query: 901 SSAPV-MGRVCDRSCSLGYTQYDSTQV 909
           SSAPV  G+        GY QYDSTQV
Sbjct: 901 SSAPVGYGKSVSPQPQPGYPQYDSTQV 782

[Close]

BLAST of CmoCh09G012740 vs. TAIR 10
Match: AT4G10070.1 (KH domain-containing protein )

HSP 1 Score: 365.9 bits (938), Expect = 9.2e-101
Identity = 347/948 (36.60%), Postives = 446/948 (47.05%), Query Frame = 0


Query: 1   MAEEVVVATGVASPEPLDHKRKLADLDSEPIDEAPTENNGEESTAPDSSDVATSDESEAK 60
           M EE  V   V S  P+D KRKL ++          E NG  +   DS+   TSD S+AK
Sbjct: 1   MTEEDFV---VISTPPVDLKRKLDEV----------ELNG--NIVDDSNQ--TSDSSQAK 60

Query: 61  RLRLDGESEE-----NASENGHQEKKPEELAKEDGNQSSQEEQPASLEEVPEKEEA---- 120
           R +L+ E+++     N  ENG   +  EE   ++  + +Q+  P  +EEV +   A    
Sbjct: 61  RAKLEDEAQDGLDYGNTQENGSSMEVKEEEQLQEPKEENQDSVPL-VEEVQDPIHADESE 120

Query: 121 -----------EQLTSEPHEAGDTQDSAAEISQ---DDKTQELSKEESQPPEVEAALPLK 180
                      +Q+  E ++ G  +D      Q   DD ++E++   SQ    E    + 
Sbjct: 121 NKICSVDQPTDDQVKPEDNQQGCIEDVNGGEHQKVIDDDSKEVNDGSSQENGKEENKEVD 180

Query: 181 ENASNAEQDQPSSGAETTTYRMEVPNSKVGVLIGKAGDTIRYLQYNSGAKIQIMRDAEVD 240
              S  E D    G ++TT R++VP+SKVGVLIGK G+TIRYLQ+NSGAKIQI+RD+E D
Sbjct: 181 GEKSQKEVD----GTQSTTRRIDVPSSKVGVLIGKGGETIRYLQFNSGAKIQILRDSEAD 240

Query: 241 PNCVTRPVELIGTSENIKKAEELINAVIAEADAGGSPSLIAKGLTSLHSIATAEQIQLQV 300
           P+   RPVE+IG+   I+ AE+LI+AVIAEA+AGGSP+L+A+G  S H+I   EQI+++V
Sbjct: 241 PSSALRPVEIIGSVACIESAEKLISAVIAEAEAGGSPALVARGHPSTHAIGIPEQIEIKV 300

Query: 301 PNEKVGLIIGKGGETIKSLQTRSGARIQLIPQNLPEGDVSKEKTIRVTGDRKQVEIATNM 360
           PN+KVGLIIG+GGETIK++QTRSGAR QLIPQ+  EGD  KE+T+R++GD+ Q++IAT+M
Sbjct: 301 PNDKVGLIIGRGGETIKNMQTRSGARTQLIPQH-AEGDGLKERTVRISGDKMQIDIATDM 360

Query: 361 IKEVMSQSVLSISYIRSLSMITFLSKWLHLLANLPSVKEVNISIYMLFDIVLAVESVIHF 420
           IK+VM+Q+                                                    
Sbjct: 361 IKDVMNQN---------------------------------------------------- 420

Query: 421 YSLDDIDGSERSYTEIQDTGYHNLSIIKVSNSNWLALKLQITILPFPWGRHCFLAVSIDN 480
                                                                       
Sbjct: 421 ------------------------------------------------------------ 480

Query: 481 SYSLPSTEERYQALNLAIAGSSTYFIGLTVRPSPHSTGFNQQAYWPRGPGGPTQWGQRGP 540
                                         RPS +S G+NQ AY P+GPGGP QWG RGP
Sbjct: 481 -----------------------------ARPSSYSGGYNQPAYRPQGPGGPPQWGSRGP 540

Query: 541 HPSHPPAYDYPHRGPYPSHNTQYQHPAYGNYPQQMGGPRSSYSSGWEQRAPRSMQGPPPP 600
           H  HP  YDY  RGPY S  + Y  P +G YP Q   PR  Y + W+QR         PP
Sbjct: 541 HAPHP--YDYHPRGPYSSQGSYYNSPGFGGYPPQHMPPRGGYGTDWDQR---------PP 600

Query: 601 SSGGYDYYGGRSHFSEAPPSHFPGAMPAHAPGPSPAPALGPPQTQSSYNYSQQQSQGHGH 660
            SG Y+YYG +   S  P        P   P PSPA   GPP +Q SY Y Q     +GH
Sbjct: 601 YSGPYNYYGRQGAQSAGP------VPPPSGPVPSPAFG-GPPLSQVSYGYGQSHGPEYGH 660

Query: 661 AAPFSQAAPHQSYGHGYEQ-KYDHHAPAQNPYGGHGNAQQLYPQAGAQQAYPGQQQYDNK 720
           AAP+SQ    Q+YG  YEQ KYD + P Q PYGG       YP AG  Q+   Q Q    
Sbjct: 661 AAPYSQTGYQQTYGQTYEQPKYDSNPPMQPPYGGS------YPPAGGGQSGYYQMQQPGV 720

Query: 721 PPSYGVPAQGPPPQSYGAPRVGQPAE----PYQGGS-APASYGQ-NMQPQQT---YSYPT 780
            P YG+  QGP  Q YG P+    A     PYQG + A  SYG  NM PQQ    Y+   
Sbjct: 721 RP-YGM-QQGPVQQGYGPPQPAAAASSGDVPYQGATPAAPSYGSTNMAPQQQQYGYTSSD 720

Query: 781 GGLTQQ-YPSYGTVPNTDGYN---QVPAASAA-ASYSQQGAQAGYGQPGVQQPSA--YSQ 840
           G + QQ YPSY + P +D YN   Q PA   A    S Q A + Y Q G QQ +A  Y  
Sbjct: 781 GPVQQQTYPSYSSAPPSDAYNNGTQTPATGPAYQQQSVQPASSTYDQTGAQQAAAAGYGG 720

Query: 841 QVAPAAAYAQYPTSQQGYPEQAAGYATYQAPQDPTAYSAATTAAPAAYTAPASGQPGYTQ 900
           QVAP   Y  YPTSQ  Y  Q                        AAY+  A  Q GY Q
Sbjct: 841 QVAPTGGYT-YPTSQPAYGSQ------------------------AAYSQAAPTQTGYEQ 720

Query: 901 QAVSQPNYDQSIPQSGGYGTVPSSAPVMGRVCDRSCSLGYTQYDSTQV 909
           Q  +         Q+  Y T P +APV      +S    Y QYD++QV
Sbjct: 901 QPAT---------QAAVYATAPGTAPVK----TQSPQSAYAQYDASQV 720

[Close]

BLAST of CmoCh09G012740 vs. TAIR 10
Match: AT1G33680.1 (KH domain-containing protein )

HSP 1 Score: 347.8 bits (891), Expect = 2.6e-95
Identity = 330/981 (33.64%), Postives = 437/981 (44.55%), Query Frame = 0


Query: 1   MAEEVVVATGVASPEPLDHKRKLADLDSEPIDEAPTENNGEESTAPDSSDVATSDESEAK 60
           MAEE V+A  V   +P DHKRKL +L+SE +++    +   + +  D  D   SD  + K
Sbjct: 1   MAEEEVIAIPV---QPSDHKRKLENLESEILEQQHAGSIDNDVSVDD--DKNASDYCQPK 60

Query: 61  RLRLDGESEENASENGHQEKKPEELAKEDGNQ----SSQEEQPAS--LEEVPEKEEAEQL 120
           R +LD E+ +     G  E   +  +KE+G +     S E Q  +  +E+V E  +AE+ 
Sbjct: 61  RPKLDDEAVDGLGIGGTVENSGDVESKEEGTEKPIAQSDENQDGNPLIEKVQETIDAEES 120

Query: 121 TSEPHEAGDTQDSAAEISQDDKTQELSKEESQ-----------------------PPEVE 180
            ++  + G  +D+     +   +Q++S EES+                         EVE
Sbjct: 121 DNKMEDNGKPEDNQLVTPEVVTSQDVSVEESKEVNISGSQNEGEDDSKETNDVVAQKEVE 180

Query: 181 AALPLKENASNAEQDQPSSGAE---------------------------------TTTYR 240
                  +  + ++D+ ++G E                                 +TT R
Sbjct: 181 NGSKEVTDCDSQKEDEANAGGESKEVNGSVSHDEIGDESKEVNGGSTHKEVDDTQSTTRR 240

Query: 241 MEVPNSKVGVLIGKAGDTIRYLQYNSGAKIQIMRDAEVDPNCVTRPVELIGTSENIKKAE 300
           ++VP+SKVG LIGK G+ +RYLQ NSGAKIQI RDAE DP+   RPVE+IGT   I+KAE
Sbjct: 241 IDVPSSKVGTLIGKGGEMVRYLQVNSGAKIQIRRDAEADPSSALRPVEIIGTVSCIEKAE 300

Query: 301 ELINAVIAEADAGGSPSLIAKGLTSLHSIATAEQIQLQVPNEKVGLIIGKGGETIKSLQT 360
           +LINAVIAE +AGG P+L A+G+         EQ++++VP++KVG+IIG+GGETIK++QT
Sbjct: 301 KLINAVIAEVEAGGVPALAARGV--------PEQMEIKVPSDKVGVIIGRGGETIKNMQT 360

Query: 361 RSGARIQLIPQNLPEGDVSKEKTIRVTGDRKQVEIATNMIKEVMSQSVLSISYIRSLSMI 420
           +S ARIQLIPQN  EGD SKE+T+R++GD++Q++IAT +IK+VM Q              
Sbjct: 361 KSRARIQLIPQN--EGDASKERTVRISGDKRQIDIATALIKDVMYQ-------------- 420

Query: 421 TFLSKWLHLLANLPSVKEVNISIYMLFDIVLAVESVIHFYSLDDIDGSERSYTEIQDTGY 480
                                                        DG             
Sbjct: 421 ---------------------------------------------DG------------- 480

Query: 481 HNLSIIKVSNSNWLALKLQITILPFPWGRHCFLAVSIDNSYSLPSTEERYQALNLAIAGS 540
                                                                       
Sbjct: 481 ------------------------------------------------------------ 540

Query: 541 STYFIGLTVRPSPHSTGFNQQAYWPRGPGGPTQWGQRGPHPSHPPAYDYPHRGPYPSHNT 600
                    RPSP+S GFNQQAY PRGPGGP QWG RGPH  H   Y+Y H GPYPS  +
Sbjct: 541 ---------RPSPYSGGFNQQAYQPRGPGGPPQWGSRGPHGPHSMPYNYHHGGPYPSQGS 600

Query: 601 QYQHPAYGNYPQQMGGPRSSYSSGWEQRAPRSMQGPPPPSSGGYDYYGGRSHFSEAPPSH 660
            ++ P  G YP Q   PRS Y SGWEQR         PP SG YDYYG +          
Sbjct: 601 HFRPPNSGGYPPQHMPPRSGYGSGWEQR---------PPHSGPYDYYGRQG--------- 660

Query: 661 FPGAMPAHAPGPSPAPALGPPQTQSSYNYSQQQSQGHGHAAPFSQAAPHQSYGHGYEQKY 720
                    PGP P+                       H A +SQA   Q+YG  Y+Q +
Sbjct: 661 ------GQNPGPVPS-----------------------HGASYSQAGAQQTYGQMYDQPH 720

Query: 721 DHHAPAQNPYGGHGNAQQLYPQAGAQQAYPGQQQYDNKPPSYGVPAQGPPPQSYGAPRVG 780
             + P    YGG+G +QQ YP AG Q     Q Q  ++P  YG+  QG   Q YG PR  
Sbjct: 721 YDNPPMHQSYGGYGGSQQGYPSAGGQH----QMQQPSRP--YGM--QGSAEQGYGPPRPA 762

Query: 781 QPA--EPYQG--------------------------GSAPA--SYGQNMQPQQTYSYPTG 840
            P    PYQG                          GS PA  SYG NM  QQ Y Y + 
Sbjct: 781 APPGDVPYQGPTPAAPSYGSTPAAASYGSTPAAPSYGSTPAAPSYGSNMAQQQQYGYASS 762

Query: 841 GLTQQ-YPSYGTVPNTDGYNQVPAASAAASYSQQGAQAGYGQPGVQQPSAYSQQVAPAAA 886
             TQQ YPSY +   +DGYN     + A +Y Q GAQ      GVQQ S    QV P   
Sbjct: 841 APTQQTYPSYSSAAPSDGYNGTQPPAVAPAYEQHGAQPA---SGVQQTSGGYGQVPPTGG 762

[Close]

BLAST of CmoCh09G012740 vs. TAIR 10
Match: AT2G25970.1 (KH domain-containing protein )

HSP 1 Score: 127.9 bits (320), Expect = 4.2e-29
Identity = 175/633 (27.65%), Postives = 262/633 (41.39%), Query Frame = 0


Query: 93  SSQEEQPASLEEVP-EKEEAEQLTSEPHEAGDTQ----DSAAEISQDDKTQELSKEESQP 152
           SS    P  ++E+   K++A+++ +    + D +    D+ A     D  +  S   S+ 
Sbjct: 55  SSYNSVPPPMDEIQIAKQKAQEIAARLLNSADAKRPRVDNGASYDYGD-NKGFSSYPSEG 114

Query: 153 PEVEAALPLKENASNAEQDQPSSGAETTTYRMEVPNSKVGVLIGKAGDTIRYLQYNSGAK 212
            ++   +P     S           + TT ++++PN +VGV+IGK G+TI+YLQ  SGAK
Sbjct: 115 KQMSGTVPSSIPVS-------YGSFQGTTKKIDIPNMRVGVIIGKGGETIKYLQLQSGAK 174

Query: 213 IQIMRDAEVDPNCVTRPVELIGTSENIKKAEELINAVIAEADAGGSPSLIAKGLTSLHSI 272
           IQ+ RD + DPNC TR V+L GT + I KAE+LI  V+ EA+AG +      G   +   
Sbjct: 175 IQVTRDMDADPNCATRTVDLTGTPDQISKAEQLITDVLQEAEAGNTAGSGGGGGRRMGGQ 234

Query: 273 ATAEQIQLQVPNEKVGLIIGKGGETIKSLQTRSGARIQLIPQNLPEGDVSKEKTIRVTGD 332
           A A+Q  +++PN KVGLIIGKGGETIKS+Q ++GARIQ+IP +LP GD + E+T+++ G 
Sbjct: 235 AGADQFVMKIPNNKVGLIIGKGGETIKSMQAKTGARIQVIPLHLPPGDPTPERTLQIDGI 294

Query: 333 RKQVEIATNMIKEVMSQSVLSISYIRSLSMITFLSKWLHLLANLPS--------VKEVNI 392
            +Q+E A  ++ E++S      + +R+ +M     +     A  PS          +   
Sbjct: 295 TEQIEHAKQLVNEIISGE----NRMRNSAMGGGYPQQGGYQARPPSSWAPPGGPPAQPGY 354

Query: 393 SIYMLFDIVLAVESVIHFYSLDDIDGSERSYTEIQDTGYHNLSIIKVSNSNWLALKLQIT 452
             YM        +   +            SY +    GY++ S +  S            
Sbjct: 355 GGYM--------QPGAYPGPPQYGQSPYGSYPQQTSAGYYDQSSVPPSQQ---------- 414

Query: 453 ILPFPWGRHCFLAVSIDNSYSLPSTEERYQALNLAIAGSSTYFIGLTVRPSPHSTGFNQ- 512
                         S    Y     ++  Q  +   +   T   G       H++G+ Q 
Sbjct: 415 --------------SAQGEYDYYGQQQSQQPSSGGSSAPPTDTTGYNY--YQHASGYGQA 474

Query: 513 -QAYWPRGPGGPTQWGQRGPHPSHPPAYDYPHRGPYPSHNTQYQHPAYGNYPQQMGGPRS 572
            Q Y   G G      Q G    +  A  Y  +G Y S     Q             P S
Sbjct: 475 GQGYQQDGYGAYNASQQSG----YGQAAGYDQQGGYGSTTNPSQEE-----DASQAAPPS 534

Query: 573 SYSSGWEQRAPRSMQGPPPPSSGGYDYYG----GRSHFSEAPPSHFPGAMPAHAPGPSPA 632
           S  SG         Q PP   S G   YG     ++ +S  P + +     A  P   P 
Sbjct: 535 SAQSGQAGYGTTGQQ-PPAQGSTGQAGYGAPPTSQAGYSSQPAAAYNSGYGAPPPASKP- 594

Query: 633 PALGPPQTQ--------SSYNYSQQQSQGHGHAAPFSQAAPHQSYGH--GYEQK-----Y 689
           P  G  Q          S   Y+Q  + G+G    +      Q YG   GY Q      Y
Sbjct: 595 PTYGQSQQSPGAPGSYGSQSGYAQPAASGYGQPPAYGYGQAPQGYGSYGGYTQPAAGGGY 630

[Close]

BLAST of CmoCh09G012740 vs. TAIR 10
Match: AT5G04430.2 (binding to TOMV RNA 1L (long form) )

HSP 1 Score: 70.1 bits (170), Expect = 1.0e-11
Identity = 57/171 (33.33%), Postives = 76/171 (44.44%), Query Frame = 0


Query: 147 PPEVEAALPLKENASNAEQDQPSSGAETTTYRMEVPNSKVGVLIGKAGDTIRYLQYNSGA 206
           P E+    P   ++S A+     S  + T  R  V N+  G +IGK G TI   Q  SGA
Sbjct: 12  PEELAKRSPEPHDSSEAD-----SAEKPTHIRFLVSNAAAGSVIGKGGSTITEFQAKSGA 71

Query: 207 KIQIMRDAEVDPNCVTRPVELIGTSENIKKAEELINAVIAEADAGGSPSLIAKGLTSLHS 266
           +IQ+ R+ E  P    R + + G+ + +    ELI                   L  LHS
Sbjct: 72  RIQLSRNQEFFPGTTDRIIMISGSIKEVVNGLELI-------------------LDKLHS 131

Query: 267 IATAE---------QIQLQVPNEKVGLIIGKGGETIKSLQTRSGARIQLIP 309
              AE         +I+L VPN   G IIGKGG TIKS    S A I++ P
Sbjct: 132 ELHAEDGNEVEPRRRIRLVVPNSSCGGIIGKGGATIKSFIEESKAGIKISP 158

[Close]

BLAST of CmoCh09G012740 vs. TAIR 10
Match: AT5G04430.1 (binding to TOMV RNA 1L (long form) )

HSP 1 Score: 70.1 bits (170), Expect = 1.0e-11
Identity = 57/171 (33.33%), Postives = 76/171 (44.44%), Query Frame = 0


Query: 147 PPEVEAALPLKENASNAEQDQPSSGAETTTYRMEVPNSKVGVLIGKAGDTIRYLQYNSGA 206
           P E+    P   ++S A+     S  + T  R  V N+  G +IGK G TI   Q  SGA
Sbjct: 12  PEELAKRSPEPHDSSEAD-----SAEKPTHIRFLVSNAAAGSVIGKGGSTITEFQAKSGA 71

Query: 207 KIQIMRDAEVDPNCVTRPVELIGTSENIKKAEELINAVIAEADAGGSPSLIAKGLTSLHS 266
           +IQ+ R+ E  P    R + + G+ + +    ELI                   L  LHS
Sbjct: 72  RIQLSRNQEFFPGTTDRIIMISGSIKEVVNGLELI-------------------LDKLHS 131

Query: 267 IATAE---------QIQLQVPNEKVGLIIGKGGETIKSLQTRSGARIQLIP 309
              AE         +I+L VPN   G IIGKGG TIKS    S A I++ P
Sbjct: 132 ELHAEDGNEVEPRRRIRLVVPNSSCGGIIGKGGATIKSFIEESKAGIKISP 158

The following BLAST results are available for this feature:

BLAST of CmoCh09G012740 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
Q32PX7	3.4e-15	31.22	Far upstream element-binding protein 1 OS=Rattus norvegicus OX=10116 GN=Fubp1 PE...	[more]
Q92945	1.6e-09	24.76	Far upstream element-binding protein 2 OS=Homo sapiens OX=9606 GN=KHSRP PE=1 SV=...	[more]
Q3U0V1	3.6e-09	24.52	Far upstream element-binding protein 2 OS=Mus musculus OX=10090 GN=Khsrp PE=1 SV...	[more]
Q8UVD9	1.1e-08	24.63	Far upstream element-binding protein 2 OS=Gallus gallus OX=9031 GN=KHSRP PE=1 SV...	[more]
Q99PF5	5.2e-08	24.28	Far upstream element-binding protein 2 OS=Rattus norvegicus OX=10116 GN=Khsrp PE...	[more]

BLAST of CmoCh09G012740 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A6J1EEZ3	0.0e+00	84.10	far upstream element-binding protein 1-like OS=Cucurbita moschata OX=3662 GN=LOC...	[more]
A0A6J1IEV5	0.0e+00	81.85	far upstream element-binding protein 1-like OS=Cucurbita maxima OX=3661 GN=LOC11...	[more]
A0A5D3BKY3	0.0e+00	70.84	Far upstream element-binding protein 2 OS=Cucumis melo var. makuwa OX=1194695 GN...	[more]
A0A1S3CA30	0.0e+00	70.84	far upstream element-binding protein 2 OS=Cucumis melo OX=3656 GN=LOC103498673 P...	[more]
A0A0A0KW47	0.0e+00	69.47	Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_5G649320 PE=4 SV=1	[more]

BLAST of CmoCh09G012740 vs. TAIR 10


Match Name	E-value	Identity	Description
AT4G10070.1	9.2e-101	36.60	KH domain-containing protein	[more]
AT1G33680.1	2.6e-95	33.64	KH domain-containing protein	[more]
AT2G25970.1	4.2e-29	27.65	KH domain-containing protein	[more]
AT5G04430.2	1.0e-11	33.33	binding to TOMV RNA 1L (long form)	[more]
AT5G04430.1	1.0e-11	33.33	binding to TOMV RNA 1L (long form)	[more]

InterPro

Analysis Name: InterPro Annotations of Cucurbita moschata (Rifu) v1
Date Performed: 2021-10-25


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR004087	K Homology domain	SMART	SM00322	kh_6	coord: 269..343 e-value: 3.4E-17 score: 73.1 coord: 173..246 e-value: 1.0E-15 score: 68.2
IPR036612	K Homology domain, type 1 superfamily	GENE3D	3.30.1370.10	K Homology domain, type 1	coord: 168..260 e-value: 5.6E-20 score: 73.1 coord: 265..348 e-value: 6.4E-20 score: 72.9
IPR036612	K Homology domain, type 1 superfamily	SUPERFAMILY	54791	Eukaryotic type KH-domain (KH-domain type I)	coord: 265..344
IPR036612	K Homology domain, type 1 superfamily	SUPERFAMILY	54791	Eukaryotic type KH-domain (KH-domain type I)	coord: 167..248
IPR004088	K Homology domain, type 1	PFAM	PF00013	KH_1	coord: 176..242 e-value: 6.2E-15 score: 54.8 coord: 273..340 e-value: 6.4E-18 score: 64.3
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 495..749
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 101..119
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 851..884
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 729..749
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 853..881
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 601..617
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 37..52
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 129..146
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 669..698
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 1..178
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 534..567
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 618..638
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 15..29
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 53..91
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 160..178
None	No IPR available	PANTHER	PTHR10288	KH DOMAIN CONTAINING RNA BINDING PROTEIN	coord: 139..352
None	No IPR available	PANTHER	PTHR10288:SF289	RNA-BINDING PROTEIN NOVA-1	coord: 139..352
None	No IPR available	PROSITE	PS50084	KH_TYPE_1	coord: 174..241 score: 17.107641
None	No IPR available	PROSITE	PS50084	KH_TYPE_1	coord: 270..338 score: 17.778465
None	No IPR available	CDD	cd00105	KH-I	coord: 176..241 e-value: 4.23483E-15 score: 68.7407
None	No IPR available	CDD	cd00105	KH-I	coord: 273..339 e-value: 2.95594E-17 score: 74.5187

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
CmoCh09G012740.1	CmoCh09G012740.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0010468	regulation of gene expression
cellular_component	GO:0005737	cytoplasm
molecular_function	GO:0003729	mRNA binding
molecular_function	GO:0003676	nucleic acid binding
molecular_function	GO:0003723	RNA binding