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Sequences
The following sequences are available for this feature:
Gene sequence (with intron) Legend: exonCDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below. ATGGCAGAATCATCTGGAATTAAATCACAGCGTGGATTTTTGAGTTCTAATCTCGAAGTAGAGAAATTTGATGGGACCAATAATTTTGGTGTTTGGCAAGGCGAAGTTAGCGATTTGCTGGTCATGCAAGATCTTGATGCTTCTCTGCAAAAGGTGACCATGGCGAAAGAACTATGGGACAAGCTTGAGGCGAAATATATGCAAAAGAGCATGGAAAATAAACTCTATTTGAAGAAGAAACTATTCCGTTTTGACTACAAGAAAGGTATCTCAATGGCTGAGCATTTGGATGATTTTAACAAAATCATCACTGATTTGCTCAATCTTGATGTTAAGATTGATGACGAAGATAAGGCGTTGTTATTAAATTCTTTGTCGGAGTCCTACGAGTTTTTAGTAACCACTCTATTGCATGGAGCCTATGATATTAATTTTGAAGATGTTTCAAATGCCTTGATGAATAATGAGGTGCGAAAGAAGGAAAAGAAGACATATCAAGACTCTAGCTCAAATGTTCTCACTGCTCGTGAAAGGACTTCTACTTGGAAAAGGAGCGAATGTGGAGAGTCCCGATCAAAGTCGAGAGGTAGATATGGTAATTGGAGAAAACCTGATAAAAATGAGTGTGCATATTGTCGACAGAAAGGCCATTGGAAGAAAGATTGCCCGATCTTAAAAGAGAAGGGGTCGAAGTCCAATGTAGTTAGCGATAACGACACTGATACAGATAATGCCTCGACGATCTCCTCATCAGTAAGCCAAACCAATGAATGGATTCTTGATTCTGGGTACTCCTATCATATGTGTTACAACAGAGAGATGTTTTTGGACTTCAAAGAGTTCAATGGCAGAGTTGTCTATATGGGCAATGATAGTACTTGCAAGATGACGAGAATCGGCTCAGTACAAATCAAGATGTTTGACGGGGTTATACGAAAACTCAATCATGTGAGGTATGTCCCTGACTTGAAGAAAAATTTTCTTTCCCTTGGCGTTTTGGATGCGAGTGGTTATCGTATCATTTTGGAATGA mRNA sequence ATGGCAGAATCATCTGGAATTAAATCACAGCGTGGATTTTTGAGTTCTAATCTCGAAGTAGAGAAATTTGATGGGACCAATAATTTTGGTGTTTGGCAAGGCGAAGTTAGCGATTTGCTGGTCATGCAAGATCTTGATGCTTCTCTGCAAAAGGTGACCATGGCGAAAGAACTATGGGACAAGCTTGAGGCGAAATATATGCAAAAGAGCATGGAAAATAAACTCTATTTGAAGAAGAAACTATTCCGTTTTGACTACAAGAAAGGTATCTCAATGGCTGAGCATTTGGATGATTTTAACAAAATCATCACTGATTTGCTCAATCTTGATGTTAAGATTGATGACGAAGATAAGGCGTTGTTATTAAATTCTTTGTCGGAGTCCTACGAGTTTTTAGTAACCACTCTATTGCATGGAGCCTATGATATTAATTTTGAAGATGTTTCAAATGCCTTGATGAATAATGAGGTGCGAAAGAAGGAAAAGAAGACATATCAAGACTCTAGCTCAAATGTTCTCACTGCTCGTGAAAGGACTTCTACTTGGAAAAGGAGCGAATGTGGAGAGTCCCGATCAAAGTCGAGAGGTAGATATGGTAATTGGAGAAAACCTGATAAAAATGAGTGTGCATATTGTCGACAGAAAGGCCATTGGAAGAAAGATTGCCCGATCTTAAAAGAGAAGGGGTCGAAGTCCAATGTAGTTAGCGATAACGACACTGATACAGATAATGCCTCGACGATCTCCTCATCAGTAAGCCAAACCAATGAATGGATTCTTGATTCTGGGTACTCCTATCATATGTGTTACAACAGAGAGATGTTTTTGGACTTCAAAGAGTTCAATGGCAGAGTTGTCTATATGGGCAATGATAGTACTTGCAAGATGACGAGAATCGGCTCAGTACAAATCAAGATGTTTGACGGGGTTATACGAAAACTCAATCATGTGAGGTATGTCCCTGACTTGAAGAAAAATTTTCTTTCCCTTGGCGTTTTGGATGCGAGTGGTTATCGTATCATTTTGGAATGA Coding sequence (CDS) ATGGCAGAATCATCTGGAATTAAATCACAGCGTGGATTTTTGAGTTCTAATCTCGAAGTAGAGAAATTTGATGGGACCAATAATTTTGGTGTTTGGCAAGGCGAAGTTAGCGATTTGCTGGTCATGCAAGATCTTGATGCTTCTCTGCAAAAGGTGACCATGGCGAAAGAACTATGGGACAAGCTTGAGGCGAAATATATGCAAAAGAGCATGGAAAATAAACTCTATTTGAAGAAGAAACTATTCCGTTTTGACTACAAGAAAGGTATCTCAATGGCTGAGCATTTGGATGATTTTAACAAAATCATCACTGATTTGCTCAATCTTGATGTTAAGATTGATGACGAAGATAAGGCGTTGTTATTAAATTCTTTGTCGGAGTCCTACGAGTTTTTAGTAACCACTCTATTGCATGGAGCCTATGATATTAATTTTGAAGATGTTTCAAATGCCTTGATGAATAATGAGGTGCGAAAGAAGGAAAAGAAGACATATCAAGACTCTAGCTCAAATGTTCTCACTGCTCGTGAAAGGACTTCTACTTGGAAAAGGAGCGAATGTGGAGAGTCCCGATCAAAGTCGAGAGGTAGATATGGTAATTGGAGAAAACCTGATAAAAATGAGTGTGCATATTGTCGACAGAAAGGCCATTGGAAGAAAGATTGCCCGATCTTAAAAGAGAAGGGGTCGAAGTCCAATGTAGTTAGCGATAACGACACTGATACAGATAATGCCTCGACGATCTCCTCATCAGTAAGCCAAACCAATGAATGGATTCTTGATTCTGGGTACTCCTATCATATGTGTTACAACAGAGAGATGTTTTTGGACTTCAAAGAGTTCAATGGCAGAGTTGTCTATATGGGCAATGATAGTACTTGCAAGATGACGAGAATCGGCTCAGTACAAATCAAGATGTTTGACGGGGTTATACGAAAACTCAATCATGTGAGGTATGTCCCTGACTTGAAGAAAAATTTTCTTTCCCTTGGCGTTTTGGATGCGAGTGGTTATCGTATCATTTTGGAATGA Protein sequence MAESSGIKSQRGFLSSNLEVEKFDGTNNFGVWQGEVSDLLVMQDLDASLQKVTMAKELWDKLEAKYMQKSMENKLYLKKKLFRFDYKKGISMAEHLDDFNKIITDLLNLDVKIDDEDKALLLNSLSESYEFLVTTLLHGAYDINFEDVSNALMNNEVRKKEKKTYQDSSSNVLTARERTSTWKRSECGESRSKSRGRYGNWRKPDKNECAYCRQKGHWKKDCPILKEKGSKSNVVSDNDTDTDNASTISSSVSQTNEWILDSGYSYHMCYNREMFLDFKEFNGRVVYMGNDSTCKMTRIGSVQIKMFDGVIRKLNHVRYVPDLKKNFLSLGVLDASGYRIILE
Homology
BLAST of CmoCh09G012520 vs. ExPASy Swiss-Prot
Match: P10978 (Retrovirus-related Pol polyprotein from transposon TNT 1-94 OS=Nicotiana tabacum OX=4097 PE=2 SV=1) HSP 1 Score: 173.3 bits (438), Expect = 4.7e-42 Identity = 130/372 (34.95%), Postives = 187/372 (50.27%), Query Frame = 0
Query: 19 EVEKFDGTNNFGVWQGEVSDLLVMQ----------------------DLD---ASLQKVT 78
EV KF+G N F WQ + DLL+ Q DLD AS ++
Sbjct: 7 EVAKFNGDNGFSTWQRRMRDLLIQQGLHKVLDVDSKKPDTMKAEDWADLDERAASAIRLH 66
Query: 79 M-------------AKELWDKLEAKYMQKSMENKLYLKKKLFRFDYKKGISMAEHLDDFN 138
+ A+ +W +LE+ YM K++ NKLYLKK+L+ +G + HL+ FN
Sbjct: 67 LSDDVVNNIIDEDTARGIWTRLESLYMSKTLTNKLYLKKQLYALHMSEGTNFLSHLNVFN 126
Query: 139 KIITDLLNLDVKIDDEDKA-LLLNSLSESYEFLVTTLLHGAYDINFEDVSNALMNNEVRK 198
+IT L NL VKI++EDKA LLLNSL SY+ L TT+LHG I +DV++AL+ NE +
Sbjct: 127 GLITQLANLGVKIEEEDKAILLLNSLPSSYDNLATTILHGKTTIELKDVTSALLLNEKMR 186
Query: 199 KEKKTYQDSSSNVLTARERTSTWKRSECGESRSKSRGRYGNWRKPDKNECAYCRQKGHWK 258
K+ ++ L R +++RS RS +RG+ N K C C Q GH+K
Sbjct: 187 KK----PENQGQALITEGRGRSYQRSSNNYGRSGARGKSKNRSKSRVRNCYNCNQPGHFK 246
Query: 259 KDCP-ILKEKGSKSNVVSDNDT-----DTDNASTISSSVSQ-------TNEWILDSGYSY 318
+DCP K KG S +D++T + DN + + +EW++D+ S+
Sbjct: 247 RDCPNPRKGKGETSGQKNDDNTAAMVQNNDNVVLFINEEEECMHLSGPESEWVVDTAASH 306
Query: 319 HMCYNREMFLDFKEFNGRVVYMGNDSTCKMTRIGSVQIKMFDGVIRKLNHVRYVPDLKKN 339
H R++F + + V MGN S K+ IG + IK G L VR+VPDL+ N
Sbjct: 307 HATPVRDLFCRYVAGDFGTVKMGNTSYSKIAGIGDICIKTNVGCTLVLKDVRHVPDLRMN 366
BLAST of CmoCh09G012520 vs. ExPASy Swiss-Prot
Match: P04146 (Copia protein OS=Drosophila melanogaster OX=7227 GN=GIP PE=1 SV=3) HSP 1 Score: 62.8 bits (151), Expect = 8.9e-09 Identity = 63/239 (26.36%), Postives = 120/239 (50.21%), Query Frame = 0
Query: 55 AKELWDKLEAKYMQKSMENKLYLKKKLFRFDYKKGISMAEHLDDFNKIITDLLNLDVKID 114
A+++ + L+A Y +KS+ ++L L+K+L +S+ H F+++I++LL KI+
Sbjct: 77 ARQILENLDAVYERKSLASQLALRKRLLSLKLSSEMSLLSHFHIFDELISELLAAGAKIE 136
Query: 115 DEDK-ALLLNSLSESYEFLVTTL-LHGAYDINFEDVSNALMNNEVRKKEKKTYQDSSSNV 174
+ DK + LL +L Y+ ++T + ++ V N L++ E+ K K + D+S V
Sbjct: 137 EMDKISHLLITLPSCYDGIITAIETLSEENLTLAFVKNRLLDQEI--KIKNDHNDTSKKV 196
Query: 175 LTA--RERTSTWKRSECGESRSKSRGRY-GNWRKPDKNECAYCRQKGHWKKDCPILKEKG 234
+ A +T+K + +K + + GN + K +C +C ++GH KKDC K
Sbjct: 197 MNAIVHNNNNTYKNNLFKNRVTKPKKIFKGNSKY--KVKCHHCGREGHIKKDCFHYKRIL 256
Query: 235 SKSNVVSDNDTDTDNASTISSSVSQTNE--------WILDSGYSYHMCYNREMFLDFKE 281
+ N ++ T + I+ V + N ++LDSG S H+ + ++ D E
Sbjct: 257 NNKNKENEKQVQTATSHGIAFMVKEVNNTSVMDNCGFVLDSGASDHLINDESLYTDSVE 311
BLAST of CmoCh09G012520 vs. ExPASy TrEMBL
Match: A0A6J1EV26 (Reverse transcriptase OS=Cucurbita moschata OX=3662 GN=LOC111437896 PE=4 SV=1) HSP 1 Score: 543.1 bits (1398), Expect = 8.3e-151 Identity = 292/365 (80.00%), Postives = 305/365 (83.56%), Query Frame = 0
Query: 16 SNLEVEKFDGTNNFGVWQGEVSDLLVMQDLDASLQ------------------------- 75
SNLEVEKF+GTNNFGVW+GEVSDLLVMQDLDA+LQ
Sbjct: 1489 SNLEVEKFNGTNNFGVWRGEVSDLLVMQDLDATLQEVMLEDMTEAEWTKLNWQASGIIRS 1548
Query: 76 -----------KVTMAKELWDKLEAKYMQKSMENKLYLKKKLFRFDYKKGISMAEHLDDF 135
KVTMAKELWDKLEAKYMQKS+ENKLYLKKKLFRF YK+GISMA+HLDDF
Sbjct: 1549 CLGKDQKYPFMKVTMAKELWDKLEAKYMQKSVENKLYLKKKLFRFYYKEGISMADHLDDF 1608
Query: 136 NKIITDLLNLDVKIDDEDKA-LLLNSLSESYEFLVTTLLHGAYDINFEDVSNALMNNEVR 195
NKIITDL+NL DDEDKA LLLNSL ESY+FLVTTLLHGAYDINFEDVSNALMNNEV+
Sbjct: 1609 NKIITDLINL----DDEDKALLLLNSLPESYKFLVTTLLHGAYDINFEDVSNALMNNEVQ 1668
Query: 196 KKEKKTYQDSSSNVLTARERTSTWKRSECGESRSKSRGRYGNWRKPDKNECAYCRQKGHW 255
KKEK TYQDSSSNVLTARERTSTWKRSECGESRSKSRG+YGNW K DKNECAY RQKGHW
Sbjct: 1669 KKEKGTYQDSSSNVLTARERTSTWKRSECGESRSKSRGKYGNWIKLDKNECAYGRQKGHW 1728
Query: 256 KKDCPILKEKGSKSNVVSDNDTDTDNASTISSSVSQTNEWILDSGYSYHMCYNREMFLDF 315
KKDC ILKEK SKSNVV D+DTDTDN TISSSVSQT EWILDSG SYHMCYNREMFLDF
Sbjct: 1729 KKDCLILKEKRSKSNVVRDDDTDTDNVLTISSSVSQTREWILDSGCSYHMCYNREMFLDF 1788
Query: 316 KEFNGRVVYMGNDSTCKMTRIGSVQIKMFDGVIRKLNHVRYVPDLKKNFLSLGVLDASGY 344
KEFNG VVYMGNDSTCKMT I SVQIKMFDGVIRKLN VRYVPDLKKN +SLG+LDASGY
Sbjct: 1789 KEFNGGVVYMGNDSTCKMTGISSVQIKMFDGVIRKLNDVRYVPDLKKNLISLGILDASGY 1848
BLAST of CmoCh09G012520 vs. ExPASy TrEMBL
Match: A0A2R6RYD4 (Endonuclease OS=Actinidia chinensis var. chinensis OX=1590841 GN=CEY00_Acc02232 PE=4 SV=1) HSP 1 Score: 373.6 bits (958), Expect = 8.7e-100 Identity = 207/377 (54.91%), Postives = 257/377 (68.17%), Query Frame = 0
Query: 4 SSGIKSQRGFLS-SNLEVEKFDGTNNFGVWQGEVSDLLVMQDLDASLQ------------ 63
+SG R +S + EVEKFDGTNNFG+WQ EV D+L+ QDLD +L+
Sbjct: 13 TSGSSGHRTTMSNAKFEVEKFDGTNNFGMWQCEVLDVLIQQDLDITLEAKPEDMSEKDWA 72
Query: 64 -----------------------KVTMAKELWDKLEAKYMQKSMENKLYLKKKLFRFDYK 123
K T AKELWDKLE KYM KS+EN+LYLKKKLFRF +K
Sbjct: 73 KLNRQACGTIRLCLAKDQKYFVMKETSAKELWDKLENKYMTKSVENRLYLKKKLFRFQFK 132
Query: 124 KGISMAEHLDDFNKIITDLLNLDVKIDDEDKA-LLLNSLSESYEFLVTTLLHGAYDINFE 183
+G SM EHL+ FNKI+ DL NLDV+IDDEDKA LLLNSL ++YE L TTLL+G +I F
Sbjct: 133 QGTSMHEHLNAFNKILADLQNLDVEIDDEDKALLLLNSLPDTYEHLTTTLLYGKDEIKFN 192
Query: 184 DVSNALMNNEVRKKEKKTYQDSSSNVLTARERTSTWKRSECGESRSKSRGRYGNWRKPDK 243
DVSNALMNNEVRKK++ +++SSSN LTAR RTST K +SRSKSRG+ R+ K
Sbjct: 193 DVSNALMNNEVRKKDQDAHRESSSNALTARGRTSTRKSGGGWKSRSKSRGKSSERRQLAK 252
Query: 244 NECAYCRQKGHWKKDCPILKEKGSKSNVVSDNDTDTDNASTISSSVSQTNEWILDSGYSY 303
+ECAYC QKGHW+KDCP ++ K K+N+ D D A T+S S S ++EWILDSG SY
Sbjct: 253 DECAYCHQKGHWRKDCPKIESKEPKANIAHDAVEKDDTAFTVSLSASHSDEWILDSGCSY 312
Query: 304 HMCYNREMFLDFKEFNGRVVYMGNDSTCKMTRIGSVQIKMFDGVIRKLNHVRYVPDLKKN 344
HMC +R+ F F+E +G VV MGND+ CK IG++++KMF G ++ L VRYVPDLKKN
Sbjct: 313 HMCPHRDWFSSFEELDGGVVLMGNDNACKTMGIGTIRLKMFSGTVKVLTDVRYVPDLKKN 372
BLAST of CmoCh09G012520 vs. ExPASy TrEMBL
Match: A0A2R6QHR4 (Endonuclease OS=Actinidia chinensis var. chinensis OX=1590841 GN=CEY00_Acc18495 PE=4 SV=1) HSP 1 Score: 373.6 bits (958), Expect = 8.7e-100 Identity = 207/377 (54.91%), Postives = 257/377 (68.17%), Query Frame = 0
Query: 4 SSGIKSQRGFLS-SNLEVEKFDGTNNFGVWQGEVSDLLVMQDLDASLQ------------ 63
+SG R +S + EVEKFDGTNNFG+WQ EV D+L+ QDLD +L+
Sbjct: 13 TSGSSGHRTTMSNAKFEVEKFDGTNNFGMWQCEVLDVLIQQDLDITLEAKPEDMSEKDWA 72
Query: 64 -----------------------KVTMAKELWDKLEAKYMQKSMENKLYLKKKLFRFDYK 123
K T AKELWDKLE KYM KS+EN+LYLKKKLFRF +K
Sbjct: 73 KLNRQACGTIRLCLAKDQKYFVMKETSAKELWDKLENKYMTKSVENRLYLKKKLFRFQFK 132
Query: 124 KGISMAEHLDDFNKIITDLLNLDVKIDDEDKA-LLLNSLSESYEFLVTTLLHGAYDINFE 183
+G SM EHL+ FNKI+ DL NLDV+IDDEDKA LLLNSL ++YE L TTLL+G +I F
Sbjct: 133 QGTSMHEHLNAFNKILADLQNLDVEIDDEDKALLLLNSLPDTYEHLTTTLLYGKDEIKFN 192
Query: 184 DVSNALMNNEVRKKEKKTYQDSSSNVLTARERTSTWKRSECGESRSKSRGRYGNWRKPDK 243
DVSNALMNNEVRKK++ +++SSSN LTAR RTST K +SRSKSRG+ R+ K
Sbjct: 193 DVSNALMNNEVRKKDQDAHRESSSNALTARGRTSTRKSGGGWKSRSKSRGKSSERRQLAK 252
Query: 244 NECAYCRQKGHWKKDCPILKEKGSKSNVVSDNDTDTDNASTISSSVSQTNEWILDSGYSY 303
+ECAYC QKGHW+KDCP ++ K K+N+ D D A T+S S S ++EWILDSG SY
Sbjct: 253 DECAYCHQKGHWRKDCPKIESKEPKANIAHDAVEKDDTAFTVSLSASHSDEWILDSGCSY 312
Query: 304 HMCYNREMFLDFKEFNGRVVYMGNDSTCKMTRIGSVQIKMFDGVIRKLNHVRYVPDLKKN 344
HMC +R+ F F+E +G VV MGND+ CK IG++++KMF G ++ L VRYVPDLKKN
Sbjct: 313 HMCPHRDWFSSFEELDGGVVLMGNDNACKTMGIGTIRLKMFSGTVKVLTDVRYVPDLKKN 372
BLAST of CmoCh09G012520 vs. ExPASy TrEMBL
Match: A0A4Y1RC04 (CCHC-type domain-containing protein OS=Prunus dulcis OX=3755 GN=Prudu_012142 PE=4 SV=1) HSP 1 Score: 329.7 bits (844), Expect = 1.4e-86 Identity = 188/383 (49.09%), Postives = 247/383 (64.49%), Query Frame = 0
Query: 2 AESSGIKSQRGFLSSNLEVEKFDGTNNFGVWQGEVSDLLVMQDLDASLQ----------- 61
+ S+ ++ S+ LEV+KF+G+NNFG+WQ EV D+L Q+LD L+
Sbjct: 17 SSSAPTSNRHPIASTRLEVDKFNGSNNFGMWQCEVMDVLYQQELDMVLEDKPEDIDDKQW 76
Query: 62 ------------------------KVTMAKELWDKLEAKYMQKSMENKLYLKKKLFRFDY 121
K T AK+LW KLE KYM KS EN+L+LKK+LFRF Y
Sbjct: 77 TRINLHACATIRSFLDKELKYPYMKETSAKKLWMKLEEKYMTKSAENRLFLKKRLFRFQY 136
Query: 122 KKGISMAEHLDDFNKIITDLLNLDVKIDDEDKAL-LLNSLSESYEFLVTTLLHGAYDINF 181
+ GISM EHL+D+NKI+ DL NLDV I DEDKAL LLNSL + Y+ L TTLL+G ++
Sbjct: 137 RSGISMHEHLNDYNKILADLANLDVIIPDEDKALCLLNSLPDDYDHLTTTLLYGKSEVKL 196
Query: 182 EDVSNALMNNEVRKKEKKTYQDSSSNVLTARERTSTWKRSECGESRSKSRGRYGNWRKPD 241
++VS AL+N+E RKKE+KT Q+S + L AR RT K + G+SRSKSRG++ P
Sbjct: 197 DEVSAALVNHECRKKEQKT-QNSQTEALVARGRTEERKSGKRGKSRSKSRGKF-----PA 256
Query: 242 KNECAYCRQKGHWKKDCPILKEK-----GSKSNVVSDNDTDTDNASTISSSVSQTNEWIL 301
K+ECA+CRQKGHWKKDCP LK K GS++NV D D + A SS+ + EWIL
Sbjct: 257 KDECAFCRQKGHWKKDCPKLKNKEKEKAGSEANVAKSGDEDFEFALASSSADGHSTEWIL 316
Query: 302 DSGYSYHMCYNREMFLDFKEFNGRVVYMGNDSTCKMTRIGSVQIKMFDGVIRKLNHVRYV 344
DSG +YHMC RE F F+E +G VV MGN++ CK IG + +KM DG +R+L+ VRYV
Sbjct: 317 DSGCTYHMCPIREWFSSFEELDGGVVLMGNNNACKTQGIGKICLKMHDGTVRELSDVRYV 376
BLAST of CmoCh09G012520 vs. ExPASy TrEMBL
Match: A0A4Y1QM47 (Transposable element protein OS=Prunus dulcis OX=3755 GN=Prudu_000828 PE=4 SV=1) HSP 1 Score: 329.7 bits (844), Expect = 1.4e-86 Identity = 188/383 (49.09%), Postives = 247/383 (64.49%), Query Frame = 0
Query: 2 AESSGIKSQRGFLSSNLEVEKFDGTNNFGVWQGEVSDLLVMQDLDASLQ----------- 61
+ S+ ++ S+ LEV+KF+G+NNFG+WQ EV D+L Q+LD L+
Sbjct: 17 SSSAPTSNRHPIASTRLEVDKFNGSNNFGMWQCEVMDVLYQQELDMVLEDKPEDIDDKQW 76
Query: 62 ------------------------KVTMAKELWDKLEAKYMQKSMENKLYLKKKLFRFDY 121
K T AK+LW KLE KYM KS EN+L+LKK+LFRF Y
Sbjct: 77 TRINLHACATIRSFLDKELKYPYMKETSAKKLWMKLEEKYMTKSAENRLFLKKRLFRFQY 136
Query: 122 KKGISMAEHLDDFNKIITDLLNLDVKIDDEDKAL-LLNSLSESYEFLVTTLLHGAYDINF 181
+ GISM EHL+D+NKI+ DL NLDV I DEDKAL LLNSL + Y+ L TTLL+G ++
Sbjct: 137 RSGISMHEHLNDYNKILADLANLDVIIPDEDKALCLLNSLPDDYDHLTTTLLYGKSEVKL 196
Query: 182 EDVSNALMNNEVRKKEKKTYQDSSSNVLTARERTSTWKRSECGESRSKSRGRYGNWRKPD 241
++VS AL+N+E RKKE+KT Q+S + L AR RT K + G+SRSKSRG++ P
Sbjct: 197 DEVSAALVNHECRKKEQKT-QNSQTEALVARGRTEERKSGKRGKSRSKSRGKF-----PA 256
Query: 242 KNECAYCRQKGHWKKDCPILKEK-----GSKSNVVSDNDTDTDNASTISSSVSQTNEWIL 301
K+ECA+CRQKGHWKKDCP LK K GS++NV D D + A SS+ + EWIL
Sbjct: 257 KDECAFCRQKGHWKKDCPKLKNKEKEKVGSEANVAKSGDEDFEFALASSSADGHSTEWIL 316
Query: 302 DSGYSYHMCYNREMFLDFKEFNGRVVYMGNDSTCKMTRIGSVQIKMFDGVIRKLNHVRYV 344
DSG +YHMC RE F F+E +G VV MGN++ CK IG + +KM DG +R+L+ VRYV
Sbjct: 317 DSGCTYHMCPIREWFSSFEELDGGVVLMGNNNACKTQGIGKICLKMHDGTVRELSDVRYV 376
The following BLAST results are available for this feature:
| Match Name | E-value | Identity | Description | |
|---|
| P10978 | 4.7e-42 | 34.95 | Retrovirus-related Pol polyprotein from transposon TNT 1-94 OS=Nicotiana tabacum... | [more] |
| P04146 | 8.9e-09 | 26.36 | Copia protein OS=Drosophila melanogaster OX=7227 GN=GIP PE=1 SV=3 | [more] |
| Match Name | E-value | Identity | Description | |
|---|
| A0A6J1EV26 | 8.3e-151 | 80.00 | Reverse transcriptase OS=Cucurbita moschata OX=3662 GN=LOC111437896 PE=4 SV=1 | [more] |
| A0A2R6RYD4 | 8.7e-100 | 54.91 | Endonuclease OS=Actinidia chinensis var. chinensis OX=1590841 GN=CEY00_Acc02232 ... | [more] |
| A0A2R6QHR4 | 8.7e-100 | 54.91 | Endonuclease OS=Actinidia chinensis var. chinensis OX=1590841 GN=CEY00_Acc18495 ... | [more] |
| A0A4Y1RC04 | 1.4e-86 | 49.09 | CCHC-type domain-containing protein OS=Prunus dulcis OX=3755 GN=Prudu_012142 PE=... | [more] |
| A0A4Y1QM47 | 1.4e-86 | 49.09 | Transposable element protein OS=Prunus dulcis OX=3755 GN=Prudu_000828 PE=4 SV=1 | [more] |
| Match Name | E-value | Identity | Description | |
|---|
InterPro
Analysis Name: InterPro Annotations of Cucurbita moschata (Rifu) v1
Date Performed: 2021-10-25
Relationships
The following mRNA feature(s) are a part of this gene:
GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
| Category |
Term Accession |
Term Name |
| biological_process |
GO:0015074 |
DNA integration |
| molecular_function |
GO:0003676 |
nucleic acid binding |
| molecular_function |
GO:0008270 |
zinc ion binding |
|
