CmoCh09G011860 (gene) Cucurbita moschata (Rifu) v1

Overview


Name	CmoCh09G011860
Type	gene
Organism	Cucurbita moschata (Cucurbita moschata (Rifu) v1)
Description	60S ribosomal protein L3
Location	Cmo_Chr09: 8692367 .. 8695266 (+)
RNA-Seq Expression	CmoCh09G011860
Synteny	CmoCh09G011860

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonfive_prime_UTRCDSpolypeptidethree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGTATAATTATAGATAGTTTAGGGTTTCTTACAATATTGTGTTACCTATATATTACGACTTCTAGGGTTTTTCATCCGTCTCGCAGTTGCTGTAGCCGCAGGGGAGAAGTACGGGTTCTTTCTTTCTCCTTCGCATTCGATTTTCCCTTATTTTCTTAACCCTAATCCTACAATCTGTGGTTTGAATGTTTTAGAGAAGCTTCTGTGGACTTTGTTTAAGGTTTCTTGTGATTCTTTTCTGTCGTAGATTTTAGAGAAGTGAATTTGTTTTATTAATTCTGTAAAAAATTATGTTTCTTTTGTTCTAGTCATTTTCGCGTCTGGTTTCTGTTAAGGTGTAGAAAATGCAGTAGAATTGGAGATTCTTCTGTGTTCTTTTGCTGAACAATCTATAGTTCTCTTATTTCACGATATAAATGTTTTTTTTTTTTATTTGTTCTTTATATGAATATGGTGCCATTGGTTATTCGTCGATTTTCGGGGCTGTTTCGATTTTGTTGTGAGAATGATCTTGCTCCCCGATTTGTTGAGTGGTACCGTAGTAACTAAATCATTGGTCTTTATCAAAAATATTTGTCTGCTCAAAAGTGTTTTCTAATATTGATTCGTTTGTTTGTAGGAGTCAGTTTACAAAAATTTTGACTTCCAATTGTTTTATTGTAACTATGTTTTCTGATTTGTCTATTGACTTGTTGTTGAGTTTTGAGGAAATATGTTCTTAATGTTGATTAAATGTTTGTTTATGATGTGAAGGAAGTAGAAGATGTCTCACAGGAAATTTGAGCACCCGAGGCACGGTTCCCTTGGATTTCTTCCAAGGAAAAGAGCAGCTCGTCACAGAGGAAAAGGTATTATTTTTGCGTTTTGACTTATTTAGATTATTGTATCTGAACATAAATGTTTTTTGAACAATTCAACTTAAGAGACATCATTATTCGTTAATGCAATAAATATATTCTTTTTTTTTTTTTAATTTGTAATCGTCCCATTATTAATTACATGGTTCTGCCTAAGTTTTTTCCTTACCGTTATTAGTATTCTCCTTCTTGAGACATGCACAACCTGTGTATTTTATTATTCTTTGGTGATCTGGAGCTAAGTTATTTTTTTCATTTTTTTCCTACCCACAGTGAAGGCTTTCCCAAAGGATGACGCAAACAAACCATGCAGGTTGACTGCCTTTTTGGGTTACAAGGCTGGAATGACACACATTGTTAGGGAGGTTGAGAAGCCAGGATCAAGTACGCATAGCTCTGAATTAACTTATATATTCTTCGGTTCTTGTTGTGTGAGTTTCATTAACTTGCATCTAATACTTGGGTTTGTTTTGTTTTTTAATTTTGTAGAACTTCACAAGAAGGAAACATGTGAGCCTGTGACAATCATTGAAACCCCACCAATGGTGATTGTTGGTGTTGTTGGATACGTGAAAACCCCTCGCGGTCTTCGCACTTTGGGCACTGTTTGGGCTCAGCATTTGAGTGAAGAAGTAAGGAGGAGGTTCTACAAGAACTGGTGCAAGTCCAAGAAGAAGGCTTTCACCAAATACTCGAAACAGTATGAATCTGATGAGGGAAAGAAGACGATCCAGGAGAAGCTTGAGAAGCTGAAGAAATATTCAACTGTGATTCGTGTGTTGGCCCATACCCAGGTAACAAAATGGAATTGAAAATTGAACAGAGACCTTGTATTTATAAGTACATTGCAGATAAGAAATCTAGGCTGTTGATAGACTAATTACTCTTGCTTATATTTTGATTGAACTCTGTTTTTACATTTTATTCATGAATTTTTTAATCTACGGTTCTTAGCGTTCGGAGTACGGCACGCTTTTTATCCTTTATATTATATGAAGTCATCTTATAGTTCATTGTTTTGTAGATTACCAAGATGAAGGGATTGAAGCAAAAGAAGGCCCACCTGATGGAGATCCAAGTTAATGGTGGTACAATTGCTCAGAAGGTGGACTATGCCTATGGGTTCTTTGAGAAGCAAGTTCCAGTAGAAGCTGTCTTCCAGAAAGATGAGATGATTGATCTTATTGGTGTGACCAAGGGTAAAGGTTACGAGGGTGTTGTCACTCGTTGGGGCGTTACACGTCTCCCACGTAAGACTCACAGGGGTCTTAGGAAGGTGGCTTGTATTGGTGCTTGGCATCCTGCTAGAGTGTCATTTACCGTTGCCAGGGCTGGTCAGAACGGATACCACCACCGAACTGAAATGAACAAGAAGATCTACAGAGTTGGAAAGACGGGACAGGAAGCCCATACCGCCATCACTGAGTTCGACAGGTTAGCTAGCTAGTTGGTTCATAAGGAATTCCCTTGTATAGTCTCTAATATTTGGTGCTTGCTTTGTGTTTAAAACAACAGGACTGAGAAGGAGATTACTCCAATGGGTGGTTTCCCTCACTATGGTATTGTGAAGAGTGACTACTTGATGATCAAGGGAGGATGTGTTGGACCCAAGAAGAGGGTCATCACCCTTCGCCAGTCGCTTCTCAAACAAACTTCCCGTGTGGCTCTCGAGGAGATCAAGCTCAAGTTCATCGATACGTCCTCCAAGTTCGGCCATGGACGCTTCCAGACAACACAGGAGAAACAGAAGTTCTATGGTCGCGTCAAGGCTTAAACTTTATAGCTGCCTGCCTGCTGCTGCCGCCTCTGTTCCTGTCACCCATGAGTTTTTGTTATTTATTTCTGTTATTTCAGGATTCCGAGTAGTTGAGGTGTTTTGATTTGTTACTAAAAACTTAAATTTTGAACTTATAGCTTGCAATTAATGGGATTTGATTTCACCTTCTACCATATGATCTGACATATGAATCTTGTGTTTTCTTACTTCAAGTTTCAATATAACATTAGTATTTGTAGATTGAATCTAATTTCTAATCCTTCCA

mRNA sequence

ATGTATAATTATAGATAGTTTAGGGTTTCTTACAATATTGTGTTACCTATATATTACGACTTCTAGGGTTTTTCATCCGTCTCGCAGTTGCTGTAGCCGCAGGGGAGAAGAAGTAGAAGATGTCTCACAGGAAATTTGAGCACCCGAGGCACGGTTCCCTTGGATTTCTTCCAAGGAAAAGAGCAGCTCGTCACAGAGGAAAAGTGAAGGCTTTCCCAAAGGATGACGCAAACAAACCATGCAGGTTGACTGCCTTTTTGGGTTACAAGGCTGGAATGACACACATTGTTAGGGAGGTTGAGAAGCCAGGATCAAAACTTCACAAGAAGGAAACATGTGAGCCTGTGACAATCATTGAAACCCCACCAATGGTGATTGTTGGTGTTGTTGGATACGTGAAAACCCCTCGCGGTCTTCGCACTTTGGGCACTGTTTGGGCTCAGCATTTGAGTGAAGAAGTAAGGAGGAGGTTCTACAAGAACTGGTGCAAGTCCAAGAAGAAGGCTTTCACCAAATACTCGAAACAGTATGAATCTGATGAGGGAAAGAAGACGATCCAGGAGAAGCTTGAGAAGCTGAAGAAATATTCAACTGTGATTCGTGTGTTGGCCCATACCCAGATTACCAAGATGAAGGGATTGAAGCAAAAGAAGGCCCACCTGATGGAGATCCAAGTTAATGGTGGTACAATTGCTCAGAAGGTGGACTATGCCTATGGGTTCTTTGAGAAGCAAGTTCCAGTAGAAGCTGTCTTCCAGAAAGATGAGATGATTGATCTTATTGGTGTGACCAAGGGTAAAGGTTACGAGGGTGTTGTCACTCGTTGGGGCGTTACACGTCTCCCACGTAAGACTCACAGGGGTCTTAGGAAGGTGGCTTGTATTGGTGCTTGGCATCCTGCTAGAGTGTCATTTACCGTTGCCAGGGCTGGTCAGAACGGATACCACCACCGAACTGAAATGAACAAGAAGATCTACAGAGTTGGAAAGACGGGACAGGAAGCCCATACCGCCATCACTGAGTTCGACAGGACTGAGAAGGAGATTACTCCAATGGGTGGTTTCCCTCACTATGGTATTGTGAAGAGTGACTACTTGATGATCAAGGGAGGATGTGTTGGACCCAAGAAGAGGGTCATCACCCTTCGCCAGTCGCTTCTCAAACAAACTTCCCGTGTGGCTCTCGAGGAGATCAAGCTCAAGTTCATCGATACGTCCTCCAAGTTCGGCCATGGACGCTTCCAGACAACACAGGAGAAACAGAAGTTCTATGGTCGCGTCAAGGCTTAAACTTTATAGCTGCCTGCCTGCTGCTGCCGCCTCTGTTCCTGTCACCCATGAGTTTTTGTTATTTATTTCTGTTATTTCAGGATTCCGAGTAGTTGAGGTGTTTTGATTTGTTACTAAAAACTTAAATTTTGAACTTATAGCTTGCAATTAATGGGATTTGATTTCACCTTCTACCATATGATCTGACATATGAATCTTGTGTTTTCTTACTTCAAGTTTCAATATAACATTAGTATTTGTAGATTGAATCTAATTTCTAATCCTTCCA

Coding sequence (CDS)

ATGTCTCACAGGAAATTTGAGCACCCGAGGCACGGTTCCCTTGGATTTCTTCCAAGGAAAAGAGCAGCTCGTCACAGAGGAAAAGTGAAGGCTTTCCCAAAGGATGACGCAAACAAACCATGCAGGTTGACTGCCTTTTTGGGTTACAAGGCTGGAATGACACACATTGTTAGGGAGGTTGAGAAGCCAGGATCAAAACTTCACAAGAAGGAAACATGTGAGCCTGTGACAATCATTGAAACCCCACCAATGGTGATTGTTGGTGTTGTTGGATACGTGAAAACCCCTCGCGGTCTTCGCACTTTGGGCACTGTTTGGGCTCAGCATTTGAGTGAAGAAGTAAGGAGGAGGTTCTACAAGAACTGGTGCAAGTCCAAGAAGAAGGCTTTCACCAAATACTCGAAACAGTATGAATCTGATGAGGGAAAGAAGACGATCCAGGAGAAGCTTGAGAAGCTGAAGAAATATTCAACTGTGATTCGTGTGTTGGCCCATACCCAGATTACCAAGATGAAGGGATTGAAGCAAAAGAAGGCCCACCTGATGGAGATCCAAGTTAATGGTGGTACAATTGCTCAGAAGGTGGACTATGCCTATGGGTTCTTTGAGAAGCAAGTTCCAGTAGAAGCTGTCTTCCAGAAAGATGAGATGATTGATCTTATTGGTGTGACCAAGGGTAAAGGTTACGAGGGTGTTGTCACTCGTTGGGGCGTTACACGTCTCCCACGTAAGACTCACAGGGGTCTTAGGAAGGTGGCTTGTATTGGTGCTTGGCATCCTGCTAGAGTGTCATTTACCGTTGCCAGGGCTGGTCAGAACGGATACCACCACCGAACTGAAATGAACAAGAAGATCTACAGAGTTGGAAAGACGGGACAGGAAGCCCATACCGCCATCACTGAGTTCGACAGGACTGAGAAGGAGATTACTCCAATGGGTGGTTTCCCTCACTATGGTATTGTGAAGAGTGACTACTTGATGATCAAGGGAGGATGTGTTGGACCCAAGAAGAGGGTCATCACCCTTCGCCAGTCGCTTCTCAAACAAACTTCCCGTGTGGCTCTCGAGGAGATCAAGCTCAAGTTCATCGATACGTCCTCCAAGTTCGGCCATGGACGCTTCCAGACAACACAGGAGAAACAGAAGTTCTATGGTCGCGTCAAGGCTTAA

Protein sequence

MSHRKFEHPRHGSLGFLPRKRAARHRGKVKAFPKDDANKPCRLTAFLGYKAGMTHIVREVEKPGSKLHKKETCEPVTIIETPPMVIVGVVGYVKTPRGLRTLGTVWAQHLSEEVRRRFYKNWCKSKKKAFTKYSKQYESDEGKKTIQEKLEKLKKYSTVIRVLAHTQITKMKGLKQKKAHLMEIQVNGGTIAQKVDYAYGFFEKQVPVEAVFQKDEMIDLIGVTKGKGYEGVVTRWGVTRLPRKTHRGLRKVACIGAWHPARVSFTVARAGQNGYHHRTEMNKKIYRVGKTGQEAHTAITEFDRTEKEITPMGGFPHYGIVKSDYLMIKGGCVGPKKRVITLRQSLLKQTSRVALEEIKLKFIDTSSKFGHGRFQTTQEKQKFYGRVKA

Homology

[Close]

BLAST of CmoCh09G011860 vs. ExPASy Swiss-Prot
Match: P35684 (60S ribosomal protein L3 OS=Oryza sativa subsp. japonica OX=39947 GN=RPL3 PE=2 SV=2)

HSP 1 Score: 703.7 bits (1815), Expect = 1.1e-201
Identity = 332/389 (85.35%), Postives = 371/389 (95.37%), Query Frame = 0


Query: 1   MSHRKFEHPRHGSLGFLPRKRAARHRGKVKAFPKDDANKPCRLTAFLGYKAGMTHIVREV 60
           MSHRKFEHPRHGSLGFLPRKR++RHRGKVK+FPKDD +KPC LT+F+GYKAGMTHIVREV
Sbjct: 1   MSHRKFEHPRHGSLGFLPRKRSSRHRGKVKSFPKDDVSKPCHLTSFVGYKAGMTHIVREV 60

Query: 61  EKPGSKLHKKETCEPVTIIETPPMVIVGVVGYVKTPRGLRTLGTVWAQHLSEEVRRRFYK 120
           EKPGSKLHKKETCE VTIIETPP+VIVG+V YVKTPRGLR+L +VWAQHLSEEVRRRFYK
Sbjct: 61  EKPGSKLHKKETCEAVTIIETPPLVIVGLVAYVKTPRGLRSLNSVWAQHLSEEVRRRFYK 120

Query: 121 NWCKSKKKAFTKYSKQYESDEGKKTIQEKLEKLKKYSTVIRVLAHTQITKMKGLKQKKAH 180
           NWCKSKKKAFTKY+ +Y+SD GKK IQ +LEK+KKY++++RV+AHTQI KMKGLKQKKAH
Sbjct: 121 NWCKSKKKAFTKYALKYDSDAGKKEIQMQLEKMKKYASIVRVIAHTQIRKMKGLKQKKAH 180

Query: 181 LMEIQVNGGTIAQKVDYAYGFFEKQVPVEAVFQKDEMIDLIGVTKGKGYEGVVTRWGVTR 240
           LMEIQ+NGGTIA KVDY Y FFEK++PV+AVFQKDEMID+IGVTKGKGYEGVVTRWGVTR
Sbjct: 181 LMEIQINGGTIADKVDYGYKFFEKEIPVDAVFQKDEMIDIIGVTKGKGYEGVVTRWGVTR 240

Query: 241 LPRKTHRGLRKVACIGAWHPARVSFTVARAGQNGYHHRTEMNKKIYRVGKTGQEAHTAIT 300
           LPRKTHRGLRKVACIGAWHPARVS+TVARAGQNGYHHRTEMNKK+Y++GK+GQE+H A T
Sbjct: 241 LPRKTHRGLRKVACIGAWHPARVSYTVARAGQNGYHHRTEMNKKVYKIGKSGQESHAACT 300

Query: 301 EFDRTEKEITPMGGFPHYGIVKSDYLMIKGGCVGPKKRVITLRQSLLKQTSRVALEEIKL 360
           EFDRTEK+ITPMGGFPHYG+VK DYLMIKG CVGPKKRV+TLRQSLLKQTSR+ALEEIKL
Sbjct: 301 EFDRTEKDITPMGGFPHYGVVKGDYLMIKGCCVGPKKRVVTLRQSLLKQTSRLALEEIKL 360

Query: 361 KFIDTSSKFGHGRFQTTQEKQKFYGRVKA 390
           KFIDTSSKFGHGRFQTT EKQ+F+G++KA
Sbjct: 361 KFIDTSSKFGHGRFQTTDEKQRFFGKLKA 389

[Close]

BLAST of CmoCh09G011860 vs. ExPASy Swiss-Prot
Match: P17094 (60S ribosomal protein L3-1 OS=Arabidopsis thaliana OX=3702 GN=ARP1 PE=1 SV=5)

HSP 1 Score: 696.8 bits (1797), Expect = 1.4e-199
Identity = 335/387 (86.56%), Postives = 364/387 (94.06%), Query Frame = 0


Query: 1   MSHRKFEHPRHGSLGFLPRKRAARHRGKVKAFPKDDANKPCRLTAFLGYKAGMTHIVREV 60
           MSHRKFEHPRHGSLGFLPRKRA RHRGKVKAFPKDD  KPC+ TAF+GYKAGMTHIVREV
Sbjct: 1   MSHRKFEHPRHGSLGFLPRKRANRHRGKVKAFPKDDQTKPCKFTAFMGYKAGMTHIVREV 60

Query: 61  EKPGSKLHKKETCEPVTIIETPPMVIVGVVGYVKTPRGLRTLGTVWAQHLSEEVRRRFYK 120
           EKPGSKLHKKETCE VTIIETP MV+VGVV YVKTPRGLR+L TVWAQHLSEEVRRRFYK
Sbjct: 61  EKPGSKLHKKETCEAVTIIETPAMVVVGVVAYVKTPRGLRSLNTVWAQHLSEEVRRRFYK 120

Query: 121 NWCKSKKKAFTKYSKQYESDEGKKTIQEKLEKLKKYSTVIRVLAHTQITKMKGLKQKKAH 180
           NW KSKKKAFT Y+KQY+S++GKK IQ +LEK+KKY+TVIRVLAHTQI KMKGLKQKKAH
Sbjct: 121 NWAKSKKKAFTGYAKQYDSEDGKKGIQAQLEKMKKYATVIRVLAHTQIRKMKGLKQKKAH 180

Query: 181 LMEIQVNGGTIAQKVDYAYGFFEKQVPVEAVFQKDEMIDLIGVTKGKGYEGVVTRWGVTR 240
           +MEIQ+NGGTIAQKVD+AY FFEKQ+P+EAVFQKDEMID+IGVTKGKGYEGVVTRWGVTR
Sbjct: 181 MMEIQINGGTIAQKVDFAYSFFEKQIPIEAVFQKDEMIDIIGVTKGKGYEGVVTRWGVTR 240

Query: 241 LPRKTHRGLRKVACIGAWHPARVSFTVARAGQNGYHHRTEMNKKIYRVGKTGQEAHTAIT 300
           LPRKTHRGLRKVACIGAWHPARVS+TVARAGQNGYHHRTE+NKKIYR+GK G EAHTA+T
Sbjct: 241 LPRKTHRGLRKVACIGAWHPARVSYTVARAGQNGYHHRTELNKKIYRLGKVGTEAHTAMT 300

Query: 301 EFDRTEKEITPMGGFPHYGIVKSDYLMIKGGCVGPKKRVITLRQSLLKQTSRVALEEIKL 360
           E+DRTEK++TPMGGFPHYGIVK DYLMIKG CVGPKKRV+TLRQSLL QTSR+ALEEIKL
Sbjct: 301 EYDRTEKDVTPMGGFPHYGIVKDDYLMIKGCCVGPKKRVVTLRQSLLTQTSRLALEEIKL 360

Query: 361 KFIDTSSKFGHGRFQTTQEKQKFYGRV 388
           KFIDT+S FGHGRFQT+ EK +FY RV
Sbjct: 361 KFIDTASIFGHGRFQTSLEKMRFYNRV 387

[Close]

BLAST of CmoCh09G011860 vs. ExPASy Swiss-Prot
Match: P22738 (60S ribosomal protein L3-2 OS=Arabidopsis thaliana OX=3702 GN=ARP2 PE=2 SV=4)

HSP 1 Score: 691.8 bits (1784), Expect = 4.4e-198
Identity = 333/386 (86.27%), Postives = 364/386 (94.30%), Query Frame = 0


Query: 1   MSHRKFEHPRHGSLGFLPRKRAARHRGKVKAFPKDDANKPCRLTAFLGYKAGMTHIVREV 60
           MSHRKFEHPRHGSLGFLPRKRA+RHRGKVKAFPKDD  KPCRLT+FLGYKAGMTHIVR+V
Sbjct: 1   MSHRKFEHPRHGSLGFLPRKRASRHRGKVKAFPKDDPTKPCRLTSFLGYKAGMTHIVRDV 60

Query: 61  EKPGSKLHKKETCEPVTIIETPPMVIVGVVGYVKTPRGLRTLGTVWAQHLSEEVRRRFYK 120
           EKPGSKLHKKETCE VTIIETPPMV+VGVVGYVKTPRGLR+L TVWAQHLSEE+RRRFYK
Sbjct: 61  EKPGSKLHKKETCEAVTIIETPPMVVVGVVGYVKTPRGLRSLCTVWAQHLSEELRRRFYK 120

Query: 121 NWCKSKKKAFTKYSKQYESDEGKKTIQEKLEKLKKYSTVIRVLAHTQITKMKGLKQKKAH 180
           NW KSKKKAFT+YSK++E++EGKK IQ +LEK+KKY +VIRVLAHTQI KMKGLKQKKAH
Sbjct: 121 NWAKSKKKAFTRYSKKHETEEGKKDIQSQLEKMKKYCSVIRVLAHTQIRKMKGLKQKKAH 180

Query: 181 LMEIQVNGGTIAQKVDYAYGFFEKQVPVEAVFQKDEMIDLIGVTKGKGYEGVVTRWGVTR 240
           L EIQ+NGG IA+KVDYA   FEKQVPV+A+FQKDEMID+IGVTKGKGYEGVVTRWGVTR
Sbjct: 181 LNEIQINGGDIAKKVDYACSLFEKQVPVDAIFQKDEMIDIIGVTKGKGYEGVVTRWGVTR 240

Query: 241 LPRKTHRGLRKVACIGAWHPARVSFTVARAGQNGYHHRTEMNKKIYRVGKTGQEAHTAIT 300
           LPRKTHRGLRKVACIGAWHPARVS+TVARAGQNGYHHRTEMNKK+YRVGK GQE H+A+T
Sbjct: 241 LPRKTHRGLRKVACIGAWHPARVSYTVARAGQNGYHHRTEMNKKVYRVGKVGQETHSAMT 300

Query: 301 EFDRTEKEITPMGGFPHYGIVKSDYLMIKGGCVGPKKRVITLRQSLLKQTSRVALEEIKL 360
           E+DRTEK+ITPMGGFPHYGIVK DYLMIKG CVGPKKRV+TLRQ+LLKQTSR+A+EEIKL
Sbjct: 301 EYDRTEKDITPMGGFPHYGIVKEDYLMIKGCCVGPKKRVVTLRQTLLKQTSRLAMEEIKL 360

Query: 361 KFIDTSSKFGHGRFQTTQEKQKFYGR 387
           KFID +S  GHGRFQT+QEK KFYGR
Sbjct: 361 KFIDAASNGGHGRFQTSQEKAKFYGR 386

[Close]

BLAST of CmoCh09G011860 vs. ExPASy Swiss-Prot
Match: P27659 (60S ribosomal protein L3 OS=Mus musculus OX=10090 GN=Rpl3 PE=1 SV=3)

HSP 1 Score: 543.5 bits (1399), Expect = 1.9e-153
Identity = 267/394 (67.77%), Postives = 330/394 (83.76%), Query Frame = 0


Query: 1   MSHRKFEHPRHGSLGFLPRKRAARHRGKVKAFPKDDANKPCRLTAFLGYKAGMTHIVREV 60
           MSHRKF  PRHGSLGFLPRKR++RHRGKVK+FPKDDA+KP  LTAFLGYKAGMTHIVREV
Sbjct: 1   MSHRKFSAPRHGSLGFLPRKRSSRHRGKVKSFPKDDASKPVHLTAFLGYKAGMTHIVREV 60

Query: 61  EKPGSKLHKKETCEPVTIIETPPMVIVGVVGYVKTPRGLRTLGTVWAQHLSEEVRRRFYK 120
           ++PGSK++KKE  E VTI+ETPPMV+VG+VGYV+TPRGLRT  TV+A+H+S+E +RRFYK
Sbjct: 61  DRPGSKVNKKEVVEAVTIVETPPMVVVGIVGYVETPRGLRTFKTVFAEHISDECKRRFYK 120

Query: 121 NWCKSKKKAFTKYSKQYESDEGKKTIQEKLEKLKKYSTVIRVLAHTQITKMKGLKQKKAH 180
           NW KSKKKAFTKY K+++ D GKK +++    +KKY  VIR++AHTQ+ ++  L+QKKAH
Sbjct: 121 NWHKSKKKAFTKYCKKWQDDTGKKQLEKDFNSMKKYCQVIRIIAHTQM-RLLPLRQKKAH 180

Query: 181 LMEIQVNGGTIAQKVDYAYGFFEKQVPVEAVFQKDEMIDLIGVTKGKGYEGVVTRWGVTR 240
           LMEIQVNGGT+A+K+D+A    E+QVPV  VF +DEMID+IGVTKGKGY+GV +RW   +
Sbjct: 181 LMEIQVNGGTVAEKLDWARERLEQQVPVNQVFGQDEMIDVIGVTKGKGYKGVTSRWHTKK 240

Query: 241 LPRKTHRGLRKVACIGAWHPARVSFTVARAGQNGYHHRTEMNKKIYRVG-----KTGQ-E 300
           LPRKTHRGLRKVACIGAWHPARV+F+VARAGQ GYHHRTE+NKKIY++G     K G+  
Sbjct: 241 LPRKTHRGLRKVACIGAWHPARVAFSVARAGQKGYHHRTEINKKIYKIGQGYLIKDGKLI 300

Query: 301 AHTAITEFDRTEKEITPMGGFPHYGIVKSDYLMIKGGCVGPKKRVITLRQSLLKQTSRVA 360
            + A T++D ++K I P+GGF HYG V +D++M+KG  VG KKRV+TLR+SLL QT R A
Sbjct: 301 KNNASTDYDLSDKSINPLGGFVHYGEVTNDFIMLKGCVVGTKKRVLTLRKSLLVQTKRRA 360

Query: 361 LEEIKLKFIDTSSKFGHGRFQTTQEKQKFYGRVK 389
           LE+I LKFIDT+SKFGHGRFQT +EK+ F G +K
Sbjct: 361 LEKIDLKFIDTTSKFGHGRFQTMEEKKAFMGPLK 393

[Close]

BLAST of CmoCh09G011860 vs. ExPASy Swiss-Prot
Match: P21531 (60S ribosomal protein L3 OS=Rattus norvegicus OX=10116 GN=Rpl3 PE=1 SV=3)

HSP 1 Score: 541.6 bits (1394), Expect = 7.4e-153
Identity = 266/394 (67.51%), Postives = 329/394 (83.50%), Query Frame = 0


Query: 1   MSHRKFEHPRHGSLGFLPRKRAARHRGKVKAFPKDDANKPCRLTAFLGYKAGMTHIVREV 60
           MSHRKF  PRHGSLGFLPRKR++RHRGKVK+FPKDD +KP  LTAFLGYKAGMTHIVREV
Sbjct: 1   MSHRKFSAPRHGSLGFLPRKRSSRHRGKVKSFPKDDPSKPVHLTAFLGYKAGMTHIVREV 60

Query: 61  EKPGSKLHKKETCEPVTIIETPPMVIVGVVGYVKTPRGLRTLGTVWAQHLSEEVRRRFYK 120
           ++PGSK++KKE  E VTI+ETPPMV+VG+VGYV+TPRGLRT  TV+A+H+S+E +RRFYK
Sbjct: 61  DRPGSKVNKKEVVEAVTIVETPPMVVVGIVGYVETPRGLRTFKTVFAEHISDECKRRFYK 120

Query: 121 NWCKSKKKAFTKYSKQYESDEGKKTIQEKLEKLKKYSTVIRVLAHTQITKMKGLKQKKAH 180
           NW KSKKKAFTKY K+++ D GKK +++    +KKY  VIR++AHTQ+ ++  L+QKKAH
Sbjct: 121 NWHKSKKKAFTKYCKKWQDDTGKKQLEKDFNSMKKYCQVIRIIAHTQM-RLLPLRQKKAH 180

Query: 181 LMEIQVNGGTIAQKVDYAYGFFEKQVPVEAVFQKDEMIDLIGVTKGKGYEGVVTRWGVTR 240
           LMEIQVNGGT+A+K+D+A    E+QVPV  VF +DEMID+IGVTKGKGY+GV +RW   +
Sbjct: 181 LMEIQVNGGTVAEKLDWARERLEQQVPVNQVFGQDEMIDVIGVTKGKGYKGVTSRWHTKK 240

Query: 241 LPRKTHRGLRKVACIGAWHPARVSFTVARAGQNGYHHRTEMNKKIYRVG-----KTGQ-E 300
           LPRKTHRGLRKVACIGAWHPARV+F+VARAGQ GYHHRTE+NKKIY++G     K G+  
Sbjct: 241 LPRKTHRGLRKVACIGAWHPARVAFSVARAGQKGYHHRTEINKKIYKIGQGYLIKDGKLI 300

Query: 301 AHTAITEFDRTEKEITPMGGFPHYGIVKSDYLMIKGGCVGPKKRVITLRQSLLKQTSRVA 360
            + A T++D ++K I P+GGF HYG V +D++M+KG  VG KKRV+TLR+SLL QT R A
Sbjct: 301 KNNASTDYDLSDKSINPLGGFVHYGEVTNDFIMLKGCVVGTKKRVLTLRKSLLVQTKRRA 360

Query: 361 LEEIKLKFIDTSSKFGHGRFQTTQEKQKFYGRVK 389
           LE+I LKFIDT+SKFGHGRFQT +EK+ F G +K
Sbjct: 361 LEKIDLKFIDTTSKFGHGRFQTMEEKKAFMGPLK 393

[Close]

BLAST of CmoCh09G011860 vs. ExPASy TrEMBL
Match: A0A6J1IA92 (60S ribosomal protein L3 OS=Cucurbita maxima OX=3661 GN=LOC111472643 PE=3 SV=1)

HSP 1 Score: 785.8 bits (2028), Expect = 8.3e-224
Identity = 389/389 (100.00%), Postives = 389/389 (100.00%), Query Frame = 0


Query: 1   MSHRKFEHPRHGSLGFLPRKRAARHRGKVKAFPKDDANKPCRLTAFLGYKAGMTHIVREV 60
           MSHRKFEHPRHGSLGFLPRKRAARHRGKVKAFPKDDANKPCRLTAFLGYKAGMTHIVREV
Sbjct: 1   MSHRKFEHPRHGSLGFLPRKRAARHRGKVKAFPKDDANKPCRLTAFLGYKAGMTHIVREV 60

Query: 61  EKPGSKLHKKETCEPVTIIETPPMVIVGVVGYVKTPRGLRTLGTVWAQHLSEEVRRRFYK 120
           EKPGSKLHKKETCEPVTIIETPPMVIVGVVGYVKTPRGLRTLGTVWAQHLSEEVRRRFYK
Sbjct: 61  EKPGSKLHKKETCEPVTIIETPPMVIVGVVGYVKTPRGLRTLGTVWAQHLSEEVRRRFYK 120

Query: 121 NWCKSKKKAFTKYSKQYESDEGKKTIQEKLEKLKKYSTVIRVLAHTQITKMKGLKQKKAH 180
           NWCKSKKKAFTKYSKQYESDEGKKTIQEKLEKLKKYSTVIRVLAHTQITKMKGLKQKKAH
Sbjct: 121 NWCKSKKKAFTKYSKQYESDEGKKTIQEKLEKLKKYSTVIRVLAHTQITKMKGLKQKKAH 180

Query: 181 LMEIQVNGGTIAQKVDYAYGFFEKQVPVEAVFQKDEMIDLIGVTKGKGYEGVVTRWGVTR 240
           LMEIQVNGGTIAQKVDYAYGFFEKQVPVEAVFQKDEMIDLIGVTKGKGYEGVVTRWGVTR
Sbjct: 181 LMEIQVNGGTIAQKVDYAYGFFEKQVPVEAVFQKDEMIDLIGVTKGKGYEGVVTRWGVTR 240

Query: 241 LPRKTHRGLRKVACIGAWHPARVSFTVARAGQNGYHHRTEMNKKIYRVGKTGQEAHTAIT 300
           LPRKTHRGLRKVACIGAWHPARVSFTVARAGQNGYHHRTEMNKKIYRVGKTGQEAHTAIT
Sbjct: 241 LPRKTHRGLRKVACIGAWHPARVSFTVARAGQNGYHHRTEMNKKIYRVGKTGQEAHTAIT 300

Query: 301 EFDRTEKEITPMGGFPHYGIVKSDYLMIKGGCVGPKKRVITLRQSLLKQTSRVALEEIKL 360
           EFDRTEKEITPMGGFPHYGIVKSDYLMIKGGCVGPKKRVITLRQSLLKQTSRVALEEIKL
Sbjct: 301 EFDRTEKEITPMGGFPHYGIVKSDYLMIKGGCVGPKKRVITLRQSLLKQTSRVALEEIKL 360

Query: 361 KFIDTSSKFGHGRFQTTQEKQKFYGRVKA 390
           KFIDTSSKFGHGRFQTTQEKQKFYGRVKA
Sbjct: 361 KFIDTSSKFGHGRFQTTQEKQKFYGRVKA 389

[Close]

BLAST of CmoCh09G011860 vs. ExPASy TrEMBL
Match: A0A6J1EXU7 (60S ribosomal protein L3 OS=Cucurbita moschata OX=3662 GN=LOC111439281 PE=3 SV=1)

HSP 1 Score: 785.8 bits (2028), Expect = 8.3e-224
Identity = 389/389 (100.00%), Postives = 389/389 (100.00%), Query Frame = 0


Query: 1   MSHRKFEHPRHGSLGFLPRKRAARHRGKVKAFPKDDANKPCRLTAFLGYKAGMTHIVREV 60
           MSHRKFEHPRHGSLGFLPRKRAARHRGKVKAFPKDDANKPCRLTAFLGYKAGMTHIVREV
Sbjct: 1   MSHRKFEHPRHGSLGFLPRKRAARHRGKVKAFPKDDANKPCRLTAFLGYKAGMTHIVREV 60

Query: 61  EKPGSKLHKKETCEPVTIIETPPMVIVGVVGYVKTPRGLRTLGTVWAQHLSEEVRRRFYK 120
           EKPGSKLHKKETCEPVTIIETPPMVIVGVVGYVKTPRGLRTLGTVWAQHLSEEVRRRFYK
Sbjct: 61  EKPGSKLHKKETCEPVTIIETPPMVIVGVVGYVKTPRGLRTLGTVWAQHLSEEVRRRFYK 120

Query: 121 NWCKSKKKAFTKYSKQYESDEGKKTIQEKLEKLKKYSTVIRVLAHTQITKMKGLKQKKAH 180
           NWCKSKKKAFTKYSKQYESDEGKKTIQEKLEKLKKYSTVIRVLAHTQITKMKGLKQKKAH
Sbjct: 121 NWCKSKKKAFTKYSKQYESDEGKKTIQEKLEKLKKYSTVIRVLAHTQITKMKGLKQKKAH 180

Query: 181 LMEIQVNGGTIAQKVDYAYGFFEKQVPVEAVFQKDEMIDLIGVTKGKGYEGVVTRWGVTR 240
           LMEIQVNGGTIAQKVDYAYGFFEKQVPVEAVFQKDEMIDLIGVTKGKGYEGVVTRWGVTR
Sbjct: 181 LMEIQVNGGTIAQKVDYAYGFFEKQVPVEAVFQKDEMIDLIGVTKGKGYEGVVTRWGVTR 240

Query: 241 LPRKTHRGLRKVACIGAWHPARVSFTVARAGQNGYHHRTEMNKKIYRVGKTGQEAHTAIT 300
           LPRKTHRGLRKVACIGAWHPARVSFTVARAGQNGYHHRTEMNKKIYRVGKTGQEAHTAIT
Sbjct: 241 LPRKTHRGLRKVACIGAWHPARVSFTVARAGQNGYHHRTEMNKKIYRVGKTGQEAHTAIT 300

Query: 301 EFDRTEKEITPMGGFPHYGIVKSDYLMIKGGCVGPKKRVITLRQSLLKQTSRVALEEIKL 360
           EFDRTEKEITPMGGFPHYGIVKSDYLMIKGGCVGPKKRVITLRQSLLKQTSRVALEEIKL
Sbjct: 301 EFDRTEKEITPMGGFPHYGIVKSDYLMIKGGCVGPKKRVITLRQSLLKQTSRVALEEIKL 360

Query: 361 KFIDTSSKFGHGRFQTTQEKQKFYGRVKA 390
           KFIDTSSKFGHGRFQTTQEKQKFYGRVKA
Sbjct: 361 KFIDTSSKFGHGRFQTTQEKQKFYGRVKA 389

[Close]

BLAST of CmoCh09G011860 vs. ExPASy TrEMBL
Match: A0A6J1F1X0 (60S ribosomal protein L3 OS=Cucurbita moschata OX=3662 GN=LOC111438907 PE=3 SV=1)

HSP 1 Score: 775.0 bits (2000), Expect = 1.5e-220
Identity = 381/389 (97.94%), Postives = 388/389 (99.74%), Query Frame = 0


Query: 1   MSHRKFEHPRHGSLGFLPRKRAARHRGKVKAFPKDDANKPCRLTAFLGYKAGMTHIVREV 60
           MSHRKFEHPRHGSLGFLPRKRAARHRGKVKAFPKDDA+KPCRLTAFLGYKAGMTHIVREV
Sbjct: 1   MSHRKFEHPRHGSLGFLPRKRAARHRGKVKAFPKDDASKPCRLTAFLGYKAGMTHIVREV 60

Query: 61  EKPGSKLHKKETCEPVTIIETPPMVIVGVVGYVKTPRGLRTLGTVWAQHLSEEVRRRFYK 120
           EKPGSKLHKKETCEPVTIIETPPMVIVGVVGYVKTPRGLRTLGTVWAQHLSEE+RRRFYK
Sbjct: 61  EKPGSKLHKKETCEPVTIIETPPMVIVGVVGYVKTPRGLRTLGTVWAQHLSEELRRRFYK 120

Query: 121 NWCKSKKKAFTKYSKQYESDEGKKTIQEKLEKLKKYSTVIRVLAHTQITKMKGLKQKKAH 180
           NWCKSKKKAFTKYSKQYE+DEGKK+IQEKLEKLKKY++VIRVLAHTQITKMKGLKQKKAH
Sbjct: 121 NWCKSKKKAFTKYSKQYETDEGKKSIQEKLEKLKKYASVIRVLAHTQITKMKGLKQKKAH 180

Query: 181 LMEIQVNGGTIAQKVDYAYGFFEKQVPVEAVFQKDEMIDLIGVTKGKGYEGVVTRWGVTR 240
           +MEIQVNGGTIAQKVDYAYGFFEKQVPVEAVFQKDEMIDLIGVTKGKGYEGVVTRWGVTR
Sbjct: 181 MMEIQVNGGTIAQKVDYAYGFFEKQVPVEAVFQKDEMIDLIGVTKGKGYEGVVTRWGVTR 240

Query: 241 LPRKTHRGLRKVACIGAWHPARVSFTVARAGQNGYHHRTEMNKKIYRVGKTGQEAHTAIT 300
           LPRKTHRGLRKVACIGAWHPARVSFTVARAGQNGYHHRTEMNKKIYRVGKTGQE HTAIT
Sbjct: 241 LPRKTHRGLRKVACIGAWHPARVSFTVARAGQNGYHHRTEMNKKIYRVGKTGQETHTAIT 300

Query: 301 EFDRTEKEITPMGGFPHYGIVKSDYLMIKGGCVGPKKRVITLRQSLLKQTSRVALEEIKL 360
           EFDRTEKEITPMGGFPHYGIVKSDYLMIKGGCVGPKKRVITLRQSLLKQTSRVALEEIKL
Sbjct: 301 EFDRTEKEITPMGGFPHYGIVKSDYLMIKGGCVGPKKRVITLRQSLLKQTSRVALEEIKL 360

Query: 361 KFIDTSSKFGHGRFQTTQEKQKFYGRVKA 390
           KFIDTSSKFGHGRFQTTQEKQKFYGRVKA
Sbjct: 361 KFIDTSSKFGHGRFQTTQEKQKFYGRVKA 389

[Close]

BLAST of CmoCh09G011860 vs. ExPASy TrEMBL
Match: A0A6J1I663 (60S ribosomal protein L3-like OS=Cucurbita maxima OX=3661 GN=LOC111471447 PE=3 SV=1)

HSP 1 Score: 772.3 bits (1993), Expect = 9.5e-220
Identity = 380/389 (97.69%), Postives = 387/389 (99.49%), Query Frame = 0


Query: 1   MSHRKFEHPRHGSLGFLPRKRAARHRGKVKAFPKDDANKPCRLTAFLGYKAGMTHIVREV 60
           MSHRKFEHPRHGSLGFLPRKRAARHRGKVKAFPKDDA+KPCRLTAFLGYKAGMTHIVREV
Sbjct: 1   MSHRKFEHPRHGSLGFLPRKRAARHRGKVKAFPKDDASKPCRLTAFLGYKAGMTHIVREV 60

Query: 61  EKPGSKLHKKETCEPVTIIETPPMVIVGVVGYVKTPRGLRTLGTVWAQHLSEEVRRRFYK 120
           EKPGSKLHKKETCEPVTIIETPPMVIVGVVGYVKTPRGLRTLGTVWAQHLSEE+RRRFYK
Sbjct: 61  EKPGSKLHKKETCEPVTIIETPPMVIVGVVGYVKTPRGLRTLGTVWAQHLSEELRRRFYK 120

Query: 121 NWCKSKKKAFTKYSKQYESDEGKKTIQEKLEKLKKYSTVIRVLAHTQITKMKGLKQKKAH 180
           NWCKSKKKAFTKYSKQYE+DEGKK+IQEKLEKLKKY++VIRVLAHTQITKMKGLKQKKAH
Sbjct: 121 NWCKSKKKAFTKYSKQYETDEGKKSIQEKLEKLKKYASVIRVLAHTQITKMKGLKQKKAH 180

Query: 181 LMEIQVNGGTIAQKVDYAYGFFEKQVPVEAVFQKDEMIDLIGVTKGKGYEGVVTRWGVTR 240
           +MEIQVNGGTIAQKVDYAYGFFEKQVPVEAVFQKDEMIDLIGVTKGKGYEGVVTRWGVTR
Sbjct: 181 MMEIQVNGGTIAQKVDYAYGFFEKQVPVEAVFQKDEMIDLIGVTKGKGYEGVVTRWGVTR 240

Query: 241 LPRKTHRGLRKVACIGAWHPARVSFTVARAGQNGYHHRTEMNKKIYRVGKTGQEAHTAIT 300
           LPRKTHRGLRKVACIGAWHPARVSFTVARAGQNGYHHRTEMNKKIYRVGKTGQE HTAIT
Sbjct: 241 LPRKTHRGLRKVACIGAWHPARVSFTVARAGQNGYHHRTEMNKKIYRVGKTGQETHTAIT 300

Query: 301 EFDRTEKEITPMGGFPHYGIVKSDYLMIKGGCVGPKKRVITLRQSLLKQTSRVALEEIKL 360
           EFDRTEKEITPMGGFPHYGIVKSDYLMIKGGCVGPKKRVITLRQSLLKQTSRVALEEIKL
Sbjct: 301 EFDRTEKEITPMGGFPHYGIVKSDYLMIKGGCVGPKKRVITLRQSLLKQTSRVALEEIKL 360

Query: 361 KFIDTSSKFGHGRFQTTQEKQKFYGRVKA 390
           KFIDTSSKFGHGRFQTT EKQKFYGRVKA
Sbjct: 361 KFIDTSSKFGHGRFQTTLEKQKFYGRVKA 389

[Close]

BLAST of CmoCh09G011860 vs. ExPASy TrEMBL
Match: A0A5A7SYQ0 (60S ribosomal protein L3 OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold155G00600 PE=3 SV=1)

HSP 1 Score: 769.6 bits (1986), Expect = 6.2e-219
Identity = 377/389 (96.92%), Postives = 387/389 (99.49%), Query Frame = 0


Query: 1   MSHRKFEHPRHGSLGFLPRKRAARHRGKVKAFPKDDANKPCRLTAFLGYKAGMTHIVREV 60
           MSHRKFEHPRHGSLGFLPRKRAARHRGKVKAFPKDDA KPCRLTAFLGYKAGMTHIVREV
Sbjct: 1   MSHRKFEHPRHGSLGFLPRKRAARHRGKVKAFPKDDATKPCRLTAFLGYKAGMTHIVREV 60

Query: 61  EKPGSKLHKKETCEPVTIIETPPMVIVGVVGYVKTPRGLRTLGTVWAQHLSEEVRRRFYK 120
           EKPGSKLHKKETCEPVTIIETPPMVIVGVVGYVKTPRGLRTLGTVWAQHLSEEVRRRFYK
Sbjct: 61  EKPGSKLHKKETCEPVTIIETPPMVIVGVVGYVKTPRGLRTLGTVWAQHLSEEVRRRFYK 120

Query: 121 NWCKSKKKAFTKYSKQYESDEGKKTIQEKLEKLKKYSTVIRVLAHTQITKMKGLKQKKAH 180
           NWCKSKKKAF KYSKQYE+DEGKKTIQEKLEKLKKY++VIRVLAHTQITKMKGLKQKKAH
Sbjct: 121 NWCKSKKKAFAKYSKQYETDEGKKTIQEKLEKLKKYASVIRVLAHTQITKMKGLKQKKAH 180

Query: 181 LMEIQVNGGTIAQKVDYAYGFFEKQVPVEAVFQKDEMIDLIGVTKGKGYEGVVTRWGVTR 240
           LMEIQVNGG+IAQKVDYAYGFFEKQVPVEAVFQKDEMIDLIGVTKGKGYEGVVTRWGVTR
Sbjct: 181 LMEIQVNGGSIAQKVDYAYGFFEKQVPVEAVFQKDEMIDLIGVTKGKGYEGVVTRWGVTR 240

Query: 241 LPRKTHRGLRKVACIGAWHPARVSFTVARAGQNGYHHRTEMNKKIYRVGKTGQEAHTAIT 300
           LPRKTHRGLRKVACIGAWHPARVSFTVARAGQNGYHHRTEMNKKIY++GKTGQE+HTAIT
Sbjct: 241 LPRKTHRGLRKVACIGAWHPARVSFTVARAGQNGYHHRTEMNKKIYKIGKTGQESHTAIT 300

Query: 301 EFDRTEKEITPMGGFPHYGIVKSDYLMIKGGCVGPKKRVITLRQSLLKQTSRVALEEIKL 360
           EFDRTEK+ITPMGGFPHYGIVKSDYLMIKGGCVGPKKRVITLRQSLLKQTSRVALEEIKL
Sbjct: 301 EFDRTEKDITPMGGFPHYGIVKSDYLMIKGGCVGPKKRVITLRQSLLKQTSRVALEEIKL 360

Query: 361 KFIDTSSKFGHGRFQTTQEKQKFYGRVKA 390
           KFIDTSSKFGHGRFQTTQEKQKF+GR+KA
Sbjct: 361 KFIDTSSKFGHGRFQTTQEKQKFFGRLKA 389

[Close]

BLAST of CmoCh09G011860 vs. NCBI nr
Match: XP_022932821.1 (60S ribosomal protein L3 [Cucurbita moschata] >XP_022932822.1 60S ribosomal protein L3 [Cucurbita moschata] >XP_022974021.1 60S ribosomal protein L3 [Cucurbita maxima] >XP_022974022.1 60S ribosomal protein L3 [Cucurbita maxima] >KAG6592264.1 60S ribosomal protein L3, partial [Cucurbita argyrosperma subsp. sororia] >KAG7025107.1 60S ribosomal protein L3 [Cucurbita argyrosperma subsp. argyrosperma])

HSP 1 Score: 785.8 bits (2028), Expect = 1.7e-223
Identity = 389/389 (100.00%), Postives = 389/389 (100.00%), Query Frame = 0


Query: 1   MSHRKFEHPRHGSLGFLPRKRAARHRGKVKAFPKDDANKPCRLTAFLGYKAGMTHIVREV 60
           MSHRKFEHPRHGSLGFLPRKRAARHRGKVKAFPKDDANKPCRLTAFLGYKAGMTHIVREV
Sbjct: 1   MSHRKFEHPRHGSLGFLPRKRAARHRGKVKAFPKDDANKPCRLTAFLGYKAGMTHIVREV 60

Query: 61  EKPGSKLHKKETCEPVTIIETPPMVIVGVVGYVKTPRGLRTLGTVWAQHLSEEVRRRFYK 120
           EKPGSKLHKKETCEPVTIIETPPMVIVGVVGYVKTPRGLRTLGTVWAQHLSEEVRRRFYK
Sbjct: 61  EKPGSKLHKKETCEPVTIIETPPMVIVGVVGYVKTPRGLRTLGTVWAQHLSEEVRRRFYK 120

Query: 121 NWCKSKKKAFTKYSKQYESDEGKKTIQEKLEKLKKYSTVIRVLAHTQITKMKGLKQKKAH 180
           NWCKSKKKAFTKYSKQYESDEGKKTIQEKLEKLKKYSTVIRVLAHTQITKMKGLKQKKAH
Sbjct: 121 NWCKSKKKAFTKYSKQYESDEGKKTIQEKLEKLKKYSTVIRVLAHTQITKMKGLKQKKAH 180

Query: 181 LMEIQVNGGTIAQKVDYAYGFFEKQVPVEAVFQKDEMIDLIGVTKGKGYEGVVTRWGVTR 240
           LMEIQVNGGTIAQKVDYAYGFFEKQVPVEAVFQKDEMIDLIGVTKGKGYEGVVTRWGVTR
Sbjct: 181 LMEIQVNGGTIAQKVDYAYGFFEKQVPVEAVFQKDEMIDLIGVTKGKGYEGVVTRWGVTR 240

Query: 241 LPRKTHRGLRKVACIGAWHPARVSFTVARAGQNGYHHRTEMNKKIYRVGKTGQEAHTAIT 300
           LPRKTHRGLRKVACIGAWHPARVSFTVARAGQNGYHHRTEMNKKIYRVGKTGQEAHTAIT
Sbjct: 241 LPRKTHRGLRKVACIGAWHPARVSFTVARAGQNGYHHRTEMNKKIYRVGKTGQEAHTAIT 300

Query: 301 EFDRTEKEITPMGGFPHYGIVKSDYLMIKGGCVGPKKRVITLRQSLLKQTSRVALEEIKL 360
           EFDRTEKEITPMGGFPHYGIVKSDYLMIKGGCVGPKKRVITLRQSLLKQTSRVALEEIKL
Sbjct: 301 EFDRTEKEITPMGGFPHYGIVKSDYLMIKGGCVGPKKRVITLRQSLLKQTSRVALEEIKL 360

Query: 361 KFIDTSSKFGHGRFQTTQEKQKFYGRVKA 390
           KFIDTSSKFGHGRFQTTQEKQKFYGRVKA
Sbjct: 361 KFIDTSSKFGHGRFQTTQEKQKFYGRVKA 389

[Close]

BLAST of CmoCh09G011860 vs. NCBI nr
Match: XP_023514600.1 (60S ribosomal protein L3-like [Cucurbita pepo subsp. pepo] >XP_023514601.1 60S ribosomal protein L3-like [Cucurbita pepo subsp. pepo])

HSP 1 Score: 782.7 bits (2020), Expect = 1.5e-222
Identity = 387/389 (99.49%), Postives = 388/389 (99.74%), Query Frame = 0


Query: 1   MSHRKFEHPRHGSLGFLPRKRAARHRGKVKAFPKDDANKPCRLTAFLGYKAGMTHIVREV 60
           MSHRKFEHPRHGSLGFLPRKRAARHRGKVKAFPKDDANKPCRLTAFLGYKAGMTHIVREV
Sbjct: 1   MSHRKFEHPRHGSLGFLPRKRAARHRGKVKAFPKDDANKPCRLTAFLGYKAGMTHIVREV 60

Query: 61  EKPGSKLHKKETCEPVTIIETPPMVIVGVVGYVKTPRGLRTLGTVWAQHLSEEVRRRFYK 120
           EKPGSKLHKKETCEPVTIIETPPMVIVGVVGYVKTPRGLRTLGTVWAQHLSEE+RRRFYK
Sbjct: 61  EKPGSKLHKKETCEPVTIIETPPMVIVGVVGYVKTPRGLRTLGTVWAQHLSEELRRRFYK 120

Query: 121 NWCKSKKKAFTKYSKQYESDEGKKTIQEKLEKLKKYSTVIRVLAHTQITKMKGLKQKKAH 180
           NWCKSKKKAFTKYSKQYESDEGKKTIQEKLEKLKKYSTVIRVLAHTQITKMKGLKQKKAH
Sbjct: 121 NWCKSKKKAFTKYSKQYESDEGKKTIQEKLEKLKKYSTVIRVLAHTQITKMKGLKQKKAH 180

Query: 181 LMEIQVNGGTIAQKVDYAYGFFEKQVPVEAVFQKDEMIDLIGVTKGKGYEGVVTRWGVTR 240
           LMEIQVNGGTIAQKVDYAYGFFEKQVPVEAVFQKDEMIDLIGVTKGKGYEGVVTRWGVTR
Sbjct: 181 LMEIQVNGGTIAQKVDYAYGFFEKQVPVEAVFQKDEMIDLIGVTKGKGYEGVVTRWGVTR 240

Query: 241 LPRKTHRGLRKVACIGAWHPARVSFTVARAGQNGYHHRTEMNKKIYRVGKTGQEAHTAIT 300
           LPRKTHRGLRKVACIGAWHPARVSFTVARAGQNGYHHRTEMNKKIYRVGKTGQEAHTAIT
Sbjct: 241 LPRKTHRGLRKVACIGAWHPARVSFTVARAGQNGYHHRTEMNKKIYRVGKTGQEAHTAIT 300

Query: 301 EFDRTEKEITPMGGFPHYGIVKSDYLMIKGGCVGPKKRVITLRQSLLKQTSRVALEEIKL 360
           EFDRTEKEITPMGGFPHYGIVKSDYLMIKGGCVGPKKRVITLRQSLLKQTSRVALEEIKL
Sbjct: 301 EFDRTEKEITPMGGFPHYGIVKSDYLMIKGGCVGPKKRVITLRQSLLKQTSRVALEEIKL 360

Query: 361 KFIDTSSKFGHGRFQTTQEKQKFYGRVKA 390
           KFIDTSSKFGHGRFQTT EKQKFYGRVKA
Sbjct: 361 KFIDTSSKFGHGRFQTTHEKQKFYGRVKA 389

[Close]

BLAST of CmoCh09G011860 vs. NCBI nr
Match: KAG6607562.1 (Cellulose synthase A catalytic subunit 6 [UDP-forming]-like protein, partial [Cucurbita argyrosperma subsp. sororia])

HSP 1 Score: 775.0 bits (2000), Expect = 3.0e-220
Identity = 381/389 (97.94%), Postives = 388/389 (99.74%), Query Frame = 0


Query: 1    MSHRKFEHPRHGSLGFLPRKRAARHRGKVKAFPKDDANKPCRLTAFLGYKAGMTHIVREV 60
            MSHRKFEHPRHGSLGFLPRKRAARHRGKVKAFPKDDA+KPCRLTAFLGYKAGMTHIVREV
Sbjct: 1052 MSHRKFEHPRHGSLGFLPRKRAARHRGKVKAFPKDDASKPCRLTAFLGYKAGMTHIVREV 1111

Query: 61   EKPGSKLHKKETCEPVTIIETPPMVIVGVVGYVKTPRGLRTLGTVWAQHLSEEVRRRFYK 120
            EKPGSKLHKKETCEPVTIIETPPMVIVGVVGYVKTPRGLRTLGTVWAQHLSEE+RRRFYK
Sbjct: 1112 EKPGSKLHKKETCEPVTIIETPPMVIVGVVGYVKTPRGLRTLGTVWAQHLSEELRRRFYK 1171

Query: 121  NWCKSKKKAFTKYSKQYESDEGKKTIQEKLEKLKKYSTVIRVLAHTQITKMKGLKQKKAH 180
            NWCKSKKKAFTKYSKQYE+DEGKK+IQEKLEKLKKY++VIRVLAHTQITKMKGLKQKKAH
Sbjct: 1172 NWCKSKKKAFTKYSKQYETDEGKKSIQEKLEKLKKYASVIRVLAHTQITKMKGLKQKKAH 1231

Query: 181  LMEIQVNGGTIAQKVDYAYGFFEKQVPVEAVFQKDEMIDLIGVTKGKGYEGVVTRWGVTR 240
            +MEIQVNGGTIAQKVDYAYGFFEKQVPVEAVFQKDEMIDLIGVTKGKGYEGVVTRWGVTR
Sbjct: 1232 MMEIQVNGGTIAQKVDYAYGFFEKQVPVEAVFQKDEMIDLIGVTKGKGYEGVVTRWGVTR 1291

Query: 241  LPRKTHRGLRKVACIGAWHPARVSFTVARAGQNGYHHRTEMNKKIYRVGKTGQEAHTAIT 300
            LPRKTHRGLRKVACIGAWHPARVSFTVARAGQNGYHHRTEMNKKIYRVGKTGQE HTAIT
Sbjct: 1292 LPRKTHRGLRKVACIGAWHPARVSFTVARAGQNGYHHRTEMNKKIYRVGKTGQETHTAIT 1351

Query: 301  EFDRTEKEITPMGGFPHYGIVKSDYLMIKGGCVGPKKRVITLRQSLLKQTSRVALEEIKL 360
            EFDRTEKEITPMGGFPHYGIVKSDYLMIKGGCVGPKKRVITLRQSLLKQTSRVALEEIKL
Sbjct: 1352 EFDRTEKEITPMGGFPHYGIVKSDYLMIKGGCVGPKKRVITLRQSLLKQTSRVALEEIKL 1411

Query: 361  KFIDTSSKFGHGRFQTTQEKQKFYGRVKA 390
            KFIDTSSKFGHGRFQTTQEKQKFYGRVKA
Sbjct: 1412 KFIDTSSKFGHGRFQTTQEKQKFYGRVKA 1440

[Close]

BLAST of CmoCh09G011860 vs. NCBI nr
Match: XP_022932508.1 (60S ribosomal protein L3 [Cucurbita moschata] >XP_023525120.1 60S ribosomal protein L3 [Cucurbita pepo subsp. pepo] >KAG7037195.1 60S ribosomal protein L3 [Cucurbita argyrosperma subsp. argyrosperma])

HSP 1 Score: 775.0 bits (2000), Expect = 3.0e-220
Identity = 381/389 (97.94%), Postives = 388/389 (99.74%), Query Frame = 0


Query: 1   MSHRKFEHPRHGSLGFLPRKRAARHRGKVKAFPKDDANKPCRLTAFLGYKAGMTHIVREV 60
           MSHRKFEHPRHGSLGFLPRKRAARHRGKVKAFPKDDA+KPCRLTAFLGYKAGMTHIVREV
Sbjct: 1   MSHRKFEHPRHGSLGFLPRKRAARHRGKVKAFPKDDASKPCRLTAFLGYKAGMTHIVREV 60

Query: 61  EKPGSKLHKKETCEPVTIIETPPMVIVGVVGYVKTPRGLRTLGTVWAQHLSEEVRRRFYK 120
           EKPGSKLHKKETCEPVTIIETPPMVIVGVVGYVKTPRGLRTLGTVWAQHLSEE+RRRFYK
Sbjct: 61  EKPGSKLHKKETCEPVTIIETPPMVIVGVVGYVKTPRGLRTLGTVWAQHLSEELRRRFYK 120

Query: 121 NWCKSKKKAFTKYSKQYESDEGKKTIQEKLEKLKKYSTVIRVLAHTQITKMKGLKQKKAH 180
           NWCKSKKKAFTKYSKQYE+DEGKK+IQEKLEKLKKY++VIRVLAHTQITKMKGLKQKKAH
Sbjct: 121 NWCKSKKKAFTKYSKQYETDEGKKSIQEKLEKLKKYASVIRVLAHTQITKMKGLKQKKAH 180

Query: 181 LMEIQVNGGTIAQKVDYAYGFFEKQVPVEAVFQKDEMIDLIGVTKGKGYEGVVTRWGVTR 240
           +MEIQVNGGTIAQKVDYAYGFFEKQVPVEAVFQKDEMIDLIGVTKGKGYEGVVTRWGVTR
Sbjct: 181 MMEIQVNGGTIAQKVDYAYGFFEKQVPVEAVFQKDEMIDLIGVTKGKGYEGVVTRWGVTR 240

Query: 241 LPRKTHRGLRKVACIGAWHPARVSFTVARAGQNGYHHRTEMNKKIYRVGKTGQEAHTAIT 300
           LPRKTHRGLRKVACIGAWHPARVSFTVARAGQNGYHHRTEMNKKIYRVGKTGQE HTAIT
Sbjct: 241 LPRKTHRGLRKVACIGAWHPARVSFTVARAGQNGYHHRTEMNKKIYRVGKTGQETHTAIT 300

Query: 301 EFDRTEKEITPMGGFPHYGIVKSDYLMIKGGCVGPKKRVITLRQSLLKQTSRVALEEIKL 360
           EFDRTEKEITPMGGFPHYGIVKSDYLMIKGGCVGPKKRVITLRQSLLKQTSRVALEEIKL
Sbjct: 301 EFDRTEKEITPMGGFPHYGIVKSDYLMIKGGCVGPKKRVITLRQSLLKQTSRVALEEIKL 360

Query: 361 KFIDTSSKFGHGRFQTTQEKQKFYGRVKA 390
           KFIDTSSKFGHGRFQTTQEKQKFYGRVKA
Sbjct: 361 KFIDTSSKFGHGRFQTTQEKQKFYGRVKA 389

[Close]

BLAST of CmoCh09G011860 vs. NCBI nr
Match: XP_022972942.1 (60S ribosomal protein L3-like [Cucurbita maxima])

HSP 1 Score: 772.3 bits (1993), Expect = 2.0e-219
Identity = 380/389 (97.69%), Postives = 387/389 (99.49%), Query Frame = 0


Query: 1   MSHRKFEHPRHGSLGFLPRKRAARHRGKVKAFPKDDANKPCRLTAFLGYKAGMTHIVREV 60
           MSHRKFEHPRHGSLGFLPRKRAARHRGKVKAFPKDDA+KPCRLTAFLGYKAGMTHIVREV
Sbjct: 1   MSHRKFEHPRHGSLGFLPRKRAARHRGKVKAFPKDDASKPCRLTAFLGYKAGMTHIVREV 60

Query: 61  EKPGSKLHKKETCEPVTIIETPPMVIVGVVGYVKTPRGLRTLGTVWAQHLSEEVRRRFYK 120
           EKPGSKLHKKETCEPVTIIETPPMVIVGVVGYVKTPRGLRTLGTVWAQHLSEE+RRRFYK
Sbjct: 61  EKPGSKLHKKETCEPVTIIETPPMVIVGVVGYVKTPRGLRTLGTVWAQHLSEELRRRFYK 120

Query: 121 NWCKSKKKAFTKYSKQYESDEGKKTIQEKLEKLKKYSTVIRVLAHTQITKMKGLKQKKAH 180
           NWCKSKKKAFTKYSKQYE+DEGKK+IQEKLEKLKKY++VIRVLAHTQITKMKGLKQKKAH
Sbjct: 121 NWCKSKKKAFTKYSKQYETDEGKKSIQEKLEKLKKYASVIRVLAHTQITKMKGLKQKKAH 180

Query: 181 LMEIQVNGGTIAQKVDYAYGFFEKQVPVEAVFQKDEMIDLIGVTKGKGYEGVVTRWGVTR 240
           +MEIQVNGGTIAQKVDYAYGFFEKQVPVEAVFQKDEMIDLIGVTKGKGYEGVVTRWGVTR
Sbjct: 181 MMEIQVNGGTIAQKVDYAYGFFEKQVPVEAVFQKDEMIDLIGVTKGKGYEGVVTRWGVTR 240

Query: 241 LPRKTHRGLRKVACIGAWHPARVSFTVARAGQNGYHHRTEMNKKIYRVGKTGQEAHTAIT 300
           LPRKTHRGLRKVACIGAWHPARVSFTVARAGQNGYHHRTEMNKKIYRVGKTGQE HTAIT
Sbjct: 241 LPRKTHRGLRKVACIGAWHPARVSFTVARAGQNGYHHRTEMNKKIYRVGKTGQETHTAIT 300

Query: 301 EFDRTEKEITPMGGFPHYGIVKSDYLMIKGGCVGPKKRVITLRQSLLKQTSRVALEEIKL 360
           EFDRTEKEITPMGGFPHYGIVKSDYLMIKGGCVGPKKRVITLRQSLLKQTSRVALEEIKL
Sbjct: 301 EFDRTEKEITPMGGFPHYGIVKSDYLMIKGGCVGPKKRVITLRQSLLKQTSRVALEEIKL 360

Query: 361 KFIDTSSKFGHGRFQTTQEKQKFYGRVKA 390
           KFIDTSSKFGHGRFQTT EKQKFYGRVKA
Sbjct: 361 KFIDTSSKFGHGRFQTTLEKQKFYGRVKA 389

[Close]

BLAST of CmoCh09G011860 vs. TAIR 10
Match: AT1G43170.1 (ribosomal protein 1 )

HSP 1 Score: 696.8 bits (1797), Expect = 9.8e-201
Identity = 335/387 (86.56%), Postives = 364/387 (94.06%), Query Frame = 0


Query: 1   MSHRKFEHPRHGSLGFLPRKRAARHRGKVKAFPKDDANKPCRLTAFLGYKAGMTHIVREV 60
           MSHRKFEHPRHGSLGFLPRKRA RHRGKVKAFPKDD  KPC+ TAF+GYKAGMTHIVREV
Sbjct: 1   MSHRKFEHPRHGSLGFLPRKRANRHRGKVKAFPKDDQTKPCKFTAFMGYKAGMTHIVREV 60

Query: 61  EKPGSKLHKKETCEPVTIIETPPMVIVGVVGYVKTPRGLRTLGTVWAQHLSEEVRRRFYK 120
           EKPGSKLHKKETCE VTIIETP MV+VGVV YVKTPRGLR+L TVWAQHLSEEVRRRFYK
Sbjct: 61  EKPGSKLHKKETCEAVTIIETPAMVVVGVVAYVKTPRGLRSLNTVWAQHLSEEVRRRFYK 120

Query: 121 NWCKSKKKAFTKYSKQYESDEGKKTIQEKLEKLKKYSTVIRVLAHTQITKMKGLKQKKAH 180
           NW KSKKKAFT Y+KQY+S++GKK IQ +LEK+KKY+TVIRVLAHTQI KMKGLKQKKAH
Sbjct: 121 NWAKSKKKAFTGYAKQYDSEDGKKGIQAQLEKMKKYATVIRVLAHTQIRKMKGLKQKKAH 180

Query: 181 LMEIQVNGGTIAQKVDYAYGFFEKQVPVEAVFQKDEMIDLIGVTKGKGYEGVVTRWGVTR 240
           +MEIQ+NGGTIAQKVD+AY FFEKQ+P+EAVFQKDEMID+IGVTKGKGYEGVVTRWGVTR
Sbjct: 181 MMEIQINGGTIAQKVDFAYSFFEKQIPIEAVFQKDEMIDIIGVTKGKGYEGVVTRWGVTR 240

Query: 241 LPRKTHRGLRKVACIGAWHPARVSFTVARAGQNGYHHRTEMNKKIYRVGKTGQEAHTAIT 300
           LPRKTHRGLRKVACIGAWHPARVS+TVARAGQNGYHHRTE+NKKIYR+GK G EAHTA+T
Sbjct: 241 LPRKTHRGLRKVACIGAWHPARVSYTVARAGQNGYHHRTELNKKIYRLGKVGTEAHTAMT 300

Query: 301 EFDRTEKEITPMGGFPHYGIVKSDYLMIKGGCVGPKKRVITLRQSLLKQTSRVALEEIKL 360
           E+DRTEK++TPMGGFPHYGIVK DYLMIKG CVGPKKRV+TLRQSLL QTSR+ALEEIKL
Sbjct: 301 EYDRTEKDVTPMGGFPHYGIVKDDYLMIKGCCVGPKKRVVTLRQSLLTQTSRLALEEIKL 360

Query: 361 KFIDTSSKFGHGRFQTTQEKQKFYGRV 388
           KFIDT+S FGHGRFQT+ EK +FY RV
Sbjct: 361 KFIDTASIFGHGRFQTSLEKMRFYNRV 387

[Close]

BLAST of CmoCh09G011860 vs. TAIR 10
Match: AT1G43170.2 (ribosomal protein 1 )

HSP 1 Score: 696.8 bits (1797), Expect = 9.8e-201
Identity = 335/387 (86.56%), Postives = 364/387 (94.06%), Query Frame = 0


Query: 1   MSHRKFEHPRHGSLGFLPRKRAARHRGKVKAFPKDDANKPCRLTAFLGYKAGMTHIVREV 60
           MSHRKFEHPRHGSLGFLPRKRA RHRGKVKAFPKDD  KPC+ TAF+GYKAGMTHIVREV
Sbjct: 1   MSHRKFEHPRHGSLGFLPRKRANRHRGKVKAFPKDDQTKPCKFTAFMGYKAGMTHIVREV 60

Query: 61  EKPGSKLHKKETCEPVTIIETPPMVIVGVVGYVKTPRGLRTLGTVWAQHLSEEVRRRFYK 120
           EKPGSKLHKKETCE VTIIETP MV+VGVV YVKTPRGLR+L TVWAQHLSEEVRRRFYK
Sbjct: 61  EKPGSKLHKKETCEAVTIIETPAMVVVGVVAYVKTPRGLRSLNTVWAQHLSEEVRRRFYK 120

Query: 121 NWCKSKKKAFTKYSKQYESDEGKKTIQEKLEKLKKYSTVIRVLAHTQITKMKGLKQKKAH 180
           NW KSKKKAFT Y+KQY+S++GKK IQ +LEK+KKY+TVIRVLAHTQI KMKGLKQKKAH
Sbjct: 121 NWAKSKKKAFTGYAKQYDSEDGKKGIQAQLEKMKKYATVIRVLAHTQIRKMKGLKQKKAH 180

Query: 181 LMEIQVNGGTIAQKVDYAYGFFEKQVPVEAVFQKDEMIDLIGVTKGKGYEGVVTRWGVTR 240
           +MEIQ+NGGTIAQKVD+AY FFEKQ+P+EAVFQKDEMID+IGVTKGKGYEGVVTRWGVTR
Sbjct: 181 MMEIQINGGTIAQKVDFAYSFFEKQIPIEAVFQKDEMIDIIGVTKGKGYEGVVTRWGVTR 240

Query: 241 LPRKTHRGLRKVACIGAWHPARVSFTVARAGQNGYHHRTEMNKKIYRVGKTGQEAHTAIT 300
           LPRKTHRGLRKVACIGAWHPARVS+TVARAGQNGYHHRTE+NKKIYR+GK G EAHTA+T
Sbjct: 241 LPRKTHRGLRKVACIGAWHPARVSYTVARAGQNGYHHRTELNKKIYRLGKVGTEAHTAMT 300

Query: 301 EFDRTEKEITPMGGFPHYGIVKSDYLMIKGGCVGPKKRVITLRQSLLKQTSRVALEEIKL 360
           E+DRTEK++TPMGGFPHYGIVK DYLMIKG CVGPKKRV+TLRQSLL QTSR+ALEEIKL
Sbjct: 301 EYDRTEKDVTPMGGFPHYGIVKDDYLMIKGCCVGPKKRVVTLRQSLLTQTSRLALEEIKL 360

Query: 361 KFIDTSSKFGHGRFQTTQEKQKFYGRV 388
           KFIDT+S FGHGRFQT+ EK +FY RV
Sbjct: 361 KFIDTASIFGHGRFQTSLEKMRFYNRV 387

[Close]

BLAST of CmoCh09G011860 vs. TAIR 10
Match: AT1G43170.3 (ribosomal protein 1 )

HSP 1 Score: 696.8 bits (1797), Expect = 9.8e-201
Identity = 335/387 (86.56%), Postives = 364/387 (94.06%), Query Frame = 0


Query: 1   MSHRKFEHPRHGSLGFLPRKRAARHRGKVKAFPKDDANKPCRLTAFLGYKAGMTHIVREV 60
           MSHRKFEHPRHGSLGFLPRKRA RHRGKVKAFPKDD  KPC+ TAF+GYKAGMTHIVREV
Sbjct: 1   MSHRKFEHPRHGSLGFLPRKRANRHRGKVKAFPKDDQTKPCKFTAFMGYKAGMTHIVREV 60

Query: 61  EKPGSKLHKKETCEPVTIIETPPMVIVGVVGYVKTPRGLRTLGTVWAQHLSEEVRRRFYK 120
           EKPGSKLHKKETCE VTIIETP MV+VGVV YVKTPRGLR+L TVWAQHLSEEVRRRFYK
Sbjct: 61  EKPGSKLHKKETCEAVTIIETPAMVVVGVVAYVKTPRGLRSLNTVWAQHLSEEVRRRFYK 120

Query: 121 NWCKSKKKAFTKYSKQYESDEGKKTIQEKLEKLKKYSTVIRVLAHTQITKMKGLKQKKAH 180
           NW KSKKKAFT Y+KQY+S++GKK IQ +LEK+KKY+TVIRVLAHTQI KMKGLKQKKAH
Sbjct: 121 NWAKSKKKAFTGYAKQYDSEDGKKGIQAQLEKMKKYATVIRVLAHTQIRKMKGLKQKKAH 180

Query: 181 LMEIQVNGGTIAQKVDYAYGFFEKQVPVEAVFQKDEMIDLIGVTKGKGYEGVVTRWGVTR 240
           +MEIQ+NGGTIAQKVD+AY FFEKQ+P+EAVFQKDEMID+IGVTKGKGYEGVVTRWGVTR
Sbjct: 181 MMEIQINGGTIAQKVDFAYSFFEKQIPIEAVFQKDEMIDIIGVTKGKGYEGVVTRWGVTR 240

Query: 241 LPRKTHRGLRKVACIGAWHPARVSFTVARAGQNGYHHRTEMNKKIYRVGKTGQEAHTAIT 300
           LPRKTHRGLRKVACIGAWHPARVS+TVARAGQNGYHHRTE+NKKIYR+GK G EAHTA+T
Sbjct: 241 LPRKTHRGLRKVACIGAWHPARVSYTVARAGQNGYHHRTELNKKIYRLGKVGTEAHTAMT 300

Query: 301 EFDRTEKEITPMGGFPHYGIVKSDYLMIKGGCVGPKKRVITLRQSLLKQTSRVALEEIKL 360
           E+DRTEK++TPMGGFPHYGIVK DYLMIKG CVGPKKRV+TLRQSLL QTSR+ALEEIKL
Sbjct: 301 EYDRTEKDVTPMGGFPHYGIVKDDYLMIKGCCVGPKKRVVTLRQSLLTQTSRLALEEIKL 360

Query: 361 KFIDTSSKFGHGRFQTTQEKQKFYGRV 388
           KFIDT+S FGHGRFQT+ EK +FY RV
Sbjct: 361 KFIDTASIFGHGRFQTSLEKMRFYNRV 387

[Close]

BLAST of CmoCh09G011860 vs. TAIR 10
Match: AT1G43170.5 (ribosomal protein 1 )

HSP 1 Score: 696.8 bits (1797), Expect = 9.8e-201
Identity = 335/387 (86.56%), Postives = 364/387 (94.06%), Query Frame = 0


Query: 1   MSHRKFEHPRHGSLGFLPRKRAARHRGKVKAFPKDDANKPCRLTAFLGYKAGMTHIVREV 60
           MSHRKFEHPRHGSLGFLPRKRA RHRGKVKAFPKDD  KPC+ TAF+GYKAGMTHIVREV
Sbjct: 1   MSHRKFEHPRHGSLGFLPRKRANRHRGKVKAFPKDDQTKPCKFTAFMGYKAGMTHIVREV 60

Query: 61  EKPGSKLHKKETCEPVTIIETPPMVIVGVVGYVKTPRGLRTLGTVWAQHLSEEVRRRFYK 120
           EKPGSKLHKKETCE VTIIETP MV+VGVV YVKTPRGLR+L TVWAQHLSEEVRRRFYK
Sbjct: 61  EKPGSKLHKKETCEAVTIIETPAMVVVGVVAYVKTPRGLRSLNTVWAQHLSEEVRRRFYK 120

Query: 121 NWCKSKKKAFTKYSKQYESDEGKKTIQEKLEKLKKYSTVIRVLAHTQITKMKGLKQKKAH 180
           NW KSKKKAFT Y+KQY+S++GKK IQ +LEK+KKY+TVIRVLAHTQI KMKGLKQKKAH
Sbjct: 121 NWAKSKKKAFTGYAKQYDSEDGKKGIQAQLEKMKKYATVIRVLAHTQIRKMKGLKQKKAH 180

Query: 181 LMEIQVNGGTIAQKVDYAYGFFEKQVPVEAVFQKDEMIDLIGVTKGKGYEGVVTRWGVTR 240
           +MEIQ+NGGTIAQKVD+AY FFEKQ+P+EAVFQKDEMID+IGVTKGKGYEGVVTRWGVTR
Sbjct: 181 MMEIQINGGTIAQKVDFAYSFFEKQIPIEAVFQKDEMIDIIGVTKGKGYEGVVTRWGVTR 240

Query: 241 LPRKTHRGLRKVACIGAWHPARVSFTVARAGQNGYHHRTEMNKKIYRVGKTGQEAHTAIT 300
           LPRKTHRGLRKVACIGAWHPARVS+TVARAGQNGYHHRTE+NKKIYR+GK G EAHTA+T
Sbjct: 241 LPRKTHRGLRKVACIGAWHPARVSYTVARAGQNGYHHRTELNKKIYRLGKVGTEAHTAMT 300

Query: 301 EFDRTEKEITPMGGFPHYGIVKSDYLMIKGGCVGPKKRVITLRQSLLKQTSRVALEEIKL 360
           E+DRTEK++TPMGGFPHYGIVK DYLMIKG CVGPKKRV+TLRQSLL QTSR+ALEEIKL
Sbjct: 301 EYDRTEKDVTPMGGFPHYGIVKDDYLMIKGCCVGPKKRVVTLRQSLLTQTSRLALEEIKL 360

Query: 361 KFIDTSSKFGHGRFQTTQEKQKFYGRV 388
           KFIDT+S FGHGRFQT+ EK +FY RV
Sbjct: 361 KFIDTASIFGHGRFQTSLEKMRFYNRV 387

[Close]

BLAST of CmoCh09G011860 vs. TAIR 10
Match: AT1G43170.6 (ribosomal protein 1 )

HSP 1 Score: 696.8 bits (1797), Expect = 9.8e-201
Identity = 335/387 (86.56%), Postives = 364/387 (94.06%), Query Frame = 0


Query: 1   MSHRKFEHPRHGSLGFLPRKRAARHRGKVKAFPKDDANKPCRLTAFLGYKAGMTHIVREV 60
           MSHRKFEHPRHGSLGFLPRKRA RHRGKVKAFPKDD  KPC+ TAF+GYKAGMTHIVREV
Sbjct: 1   MSHRKFEHPRHGSLGFLPRKRANRHRGKVKAFPKDDQTKPCKFTAFMGYKAGMTHIVREV 60

Query: 61  EKPGSKLHKKETCEPVTIIETPPMVIVGVVGYVKTPRGLRTLGTVWAQHLSEEVRRRFYK 120
           EKPGSKLHKKETCE VTIIETP MV+VGVV YVKTPRGLR+L TVWAQHLSEEVRRRFYK
Sbjct: 61  EKPGSKLHKKETCEAVTIIETPAMVVVGVVAYVKTPRGLRSLNTVWAQHLSEEVRRRFYK 120

Query: 121 NWCKSKKKAFTKYSKQYESDEGKKTIQEKLEKLKKYSTVIRVLAHTQITKMKGLKQKKAH 180
           NW KSKKKAFT Y+KQY+S++GKK IQ +LEK+KKY+TVIRVLAHTQI KMKGLKQKKAH
Sbjct: 121 NWAKSKKKAFTGYAKQYDSEDGKKGIQAQLEKMKKYATVIRVLAHTQIRKMKGLKQKKAH 180

Query: 181 LMEIQVNGGTIAQKVDYAYGFFEKQVPVEAVFQKDEMIDLIGVTKGKGYEGVVTRWGVTR 240
           +MEIQ+NGGTIAQKVD+AY FFEKQ+P+EAVFQKDEMID+IGVTKGKGYEGVVTRWGVTR
Sbjct: 181 MMEIQINGGTIAQKVDFAYSFFEKQIPIEAVFQKDEMIDIIGVTKGKGYEGVVTRWGVTR 240

Query: 241 LPRKTHRGLRKVACIGAWHPARVSFTVARAGQNGYHHRTEMNKKIYRVGKTGQEAHTAIT 300
           LPRKTHRGLRKVACIGAWHPARVS+TVARAGQNGYHHRTE+NKKIYR+GK G EAHTA+T
Sbjct: 241 LPRKTHRGLRKVACIGAWHPARVSYTVARAGQNGYHHRTELNKKIYRLGKVGTEAHTAMT 300

Query: 301 EFDRTEKEITPMGGFPHYGIVKSDYLMIKGGCVGPKKRVITLRQSLLKQTSRVALEEIKL 360
           E+DRTEK++TPMGGFPHYGIVK DYLMIKG CVGPKKRV+TLRQSLL QTSR+ALEEIKL
Sbjct: 301 EYDRTEKDVTPMGGFPHYGIVKDDYLMIKGCCVGPKKRVVTLRQSLLTQTSRLALEEIKL 360

Query: 361 KFIDTSSKFGHGRFQTTQEKQKFYGRV 388
           KFIDT+S FGHGRFQT+ EK +FY RV
Sbjct: 361 KFIDTASIFGHGRFQTSLEKMRFYNRV 387

The following BLAST results are available for this feature:

BLAST of CmoCh09G011860 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
P35684	1.1e-201	85.35	60S ribosomal protein L3 OS=Oryza sativa subsp. japonica OX=39947 GN=RPL3 PE=2 S...	[more]
P17094	1.4e-199	86.56	60S ribosomal protein L3-1 OS=Arabidopsis thaliana OX=3702 GN=ARP1 PE=1 SV=5	[more]
P22738	4.4e-198	86.27	60S ribosomal protein L3-2 OS=Arabidopsis thaliana OX=3702 GN=ARP2 PE=2 SV=4	[more]
P27659	1.9e-153	67.77	60S ribosomal protein L3 OS=Mus musculus OX=10090 GN=Rpl3 PE=1 SV=3	[more]
P21531	7.4e-153	67.51	60S ribosomal protein L3 OS=Rattus norvegicus OX=10116 GN=Rpl3 PE=1 SV=3	[more]

BLAST of CmoCh09G011860 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A6J1IA92	8.3e-224	100.00	60S ribosomal protein L3 OS=Cucurbita maxima OX=3661 GN=LOC111472643 PE=3 SV=1	[more]
A0A6J1EXU7	8.3e-224	100.00	60S ribosomal protein L3 OS=Cucurbita moschata OX=3662 GN=LOC111439281 PE=3 SV=1	[more]
A0A6J1F1X0	1.5e-220	97.94	60S ribosomal protein L3 OS=Cucurbita moschata OX=3662 GN=LOC111438907 PE=3 SV=1	[more]
A0A6J1I663	9.5e-220	97.69	60S ribosomal protein L3-like OS=Cucurbita maxima OX=3661 GN=LOC111471447 PE=3 S...	[more]
A0A5A7SYQ0	6.2e-219	96.92	60S ribosomal protein L3 OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffol...	[more]

BLAST of CmoCh09G011860 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_022932821.1	1.7e-223	100.00	60S ribosomal protein L3 [Cucurbita moschata] >XP_022932822.1 60S ribosomal prot...	[more]
XP_023514600.1	1.5e-222	99.49	60S ribosomal protein L3-like [Cucurbita pepo subsp. pepo] >XP_023514601.1 60S r...	[more]
KAG6607562.1	3.0e-220	97.94	Cellulose synthase A catalytic subunit 6 [UDP-forming]-like protein, partial [Cu...	[more]
XP_022932508.1	3.0e-220	97.94	60S ribosomal protein L3 [Cucurbita moschata] >XP_023525120.1 60S ribosomal prot...	[more]
XP_022972942.1	2.0e-219	97.69	60S ribosomal protein L3-like [Cucurbita maxima]	[more]

BLAST of CmoCh09G011860 vs. TAIR 10


Match Name	E-value	Identity	Description
AT1G43170.1	9.8e-201	86.56	ribosomal protein 1	[more]
AT1G43170.2	9.8e-201	86.56	ribosomal protein 1	[more]
AT1G43170.3	9.8e-201	86.56	ribosomal protein 1	[more]
AT1G43170.5	9.8e-201	86.56	ribosomal protein 1	[more]
AT1G43170.6	9.8e-201	86.56	ribosomal protein 1	[more]

InterPro

Analysis Name: InterPro Annotations of Cucurbita moschata (Rifu) v1
Date Performed: 2021-10-25


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR044892	Ribosomal protein L3, domain 3, archaeal type superfamily	GENE3D	4.10.960.10	Ribosomal protein L3, domain 3	coord: 1..274 e-value: 6.8E-209 score: 695.4
IPR000597	Ribosomal protein L3	PFAM	PF00297	Ribosomal_L3	coord: 1..370 e-value: 4.9E-192 score: 637.8
None	No IPR available	GENE3D	2.40.30.10	Translation factors	coord: 44..385 e-value: 6.8E-209 score: 695.4
None	No IPR available	GENE3D	3.30.1430.10		coord: 83..207 e-value: 6.8E-209 score: 695.4
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 1..34
None	No IPR available	PANTHER	PTHR11363:SF13	60S RIBOSOMAL PROTEIN L3-1	coord: 1..389
IPR045077	Ribosomal protein L3, archaeal/eukaryotic type	PANTHER	PTHR11363	60S RIBOSOMAL PROTEIN L3-RELATED	coord: 1..389
IPR019926	Ribosomal protein L3, conserved site	PROSITE	PS00474	RIBOSOMAL_L3	coord: 212..235
IPR009000	Translation protein, beta-barrel domain superfamily	SUPERFAMILY	50447	Translation proteins	coord: 4..370

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
CmoCh09G011860.1	CmoCh09G011860.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0000027	ribosomal large subunit assembly
biological_process	GO:0006412	translation
cellular_component	GO:0022625	cytosolic large ribosomal subunit
cellular_component	GO:0005840	ribosome
molecular_function	GO:0003723	RNA binding
molecular_function	GO:0003735	structural constituent of ribosome