CmoCh09G011640 (gene) Cucurbita moschata (Rifu) v1

Overview


Name	CmoCh09G011640
Type	gene
Organism	Cucurbita moschata (Cucurbita moschata (Rifu) v1)
Description	U3 small nucleolar RNA-associated protein 11
Location	Cmo_Chr09: 7363907 .. 7368285 (-)
RNA-Seq Expression	CmoCh09G011640
Synteny	CmoCh09G011640

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: polypeptideexonCDSthree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGAGGTCATCTCCATTCTTCATCGGAAACCCTAAACCCACTTTCTGCGTCTCACATCCCACCCCCAGCCTTATCAACTCCGGCGCCGACCTCGACGGCATAACCATCTATCGAACGGAGCGATCCGGCCACTCCGTTCACCCATTCTCTTCCGGCGCTAGCACCAACCGCAAACACCCGAGACGTGCGGCGGCGATGGCTCCTTCAAGAAATGGTGCGGCGAGGCTCGACTGAGCAGATTTGTGAACTGCACGAGGACATCTTCCGGCGGATTCTTCTTTAGCTATAGCCGACTTGGCGACTTCTTCCACCGATATCTACAGTGGTTCTGCTCCTCGACGGCATTCCGAATTGTCTAAATATTCTGATTTGGAATCCATCCCTGTAAACCATCTATCTTGTGTAGGATTCGTTCGATTTGCTATACGTTTAGTTGTAGGAAAACTAAGACACCGAGAACATTATTTGCTTGTAATTGCACGTTCTTCCGCTCTCTTGTTGAGTGCAATGCGGTCACTGAAGAATGCCATCCGTTCGCGGCTATACAGGAAGCGAGCTCGGCCGTAAGTGATAAAGGCTTTTTGTGATGCAATGGGGTTCTTTTCCATTCAAATTATGATATCTGACTCTTTGTGGATAATGGGTTTATGTAATGGATCAGGCATTCTCGGAGACATTTTGGGCTTTTTGAGAAACACAGAGACTATGTCAAGCGTGCTAAAGCTTATCATAAGAAGGAAGCCACTTTAGAGGTAAAGTTTGGAAGGCCCATTATCACTCTGTTTTTAATGTTAACACAATTTTTCTGCTGTTTATTGAACTCTGAGAAGTCCTCAATTTGGTTGTTTGTATTTTTTGTGCTGTTTGATTTTCAGAAACTTGAAGAGAAATCAGCCTTCAGGAATCGAGATGAATTTTACTTTAAGATGATTAAGGCCAGAACAGTCCATAAACCAGAGTAATCATTTTAGATCATTCTTAATATCTATTGATTATCAGTAATTCTGGTTTCTTCTAGTTTCTTATGCATCTTAATCTTTATATAATGTAGGAGACGGGTAAATAAGTATACTAAAGAGCAACTCATACTGATGAAAACCCAAGATGCAGAGTATATACTTCAGAAAATGCAGAGTGAGGAAAGGGTGTGTTCTTTGCGAGCTTTCATTTTTTTTAATTGACCAGGAGTTCATTGAGGAACACATTGATTTAGTTTAACTAATCTATCAATTCTCACTCTTCTGTGTAGAAAATTGAAAAACTGACAGCCACGTTACATTCTTTTGATAATCAGCCATCAAATGAGCATCTTTACTTTGCTGAAGACAGGTTTGAATCTTTTTCTACATTCCTAATTGGAAACGAATCAAATAATTGTTGTTCTGCATTAAAGGGATGAAACCCCACAACAACCACCTATTATTACTTTTCTTTTGTTTCAAACAAGAGCGTCGGGAACGTACCATAGATTTTTTGTTATGAGATATTTTATCAATATAACCTTACTACATTTGATTGCCAACGAAACTCGTAGGATACTAAATTCTAGGTATCTAATCACATTGATTGAACTCATTCCCACTAAGCTTTTATTATTCTCATGGCTCTTATGGTCACTAGGCTAACCCATGATGGTTGACTTGTGCCATCTTTATTAAAATACACTAAACCTTATTTGCAGCAAGTTTTGGTGAACCATGACTCATTGCTTTTTGCTAATTCTAATGAGGTGAAGTTATTTATGCTAGTCATTGTTGATTAATTGCAGGGAGGAGACCAATGAAATTCAATGTCGTTCCTCCAAAGGTAGATGGACAGCATTGTCTGAAACAGTTCCTAACAGTATTAAGAGGTAACATTCTTAATGAGGACACCAACTGTTGCATGTAATCTTTTCATGTTTACTTATGATTTTGATTTCTGTATTTTGAGACTTGTTCAATTTTAGTTCTTGCAACTTTCAAATGTCAATTTTTTTTTTTTTTTTTTTTTTTAATAAAAGACGATTTCATTGATGGTTGAAATTTACAAAAGGATGTAGTATCCATGGTGTTTACAAAAGTCCTTCCAATGAGGGAGGTATAACTATAGGAACTAAAAATATTAGACAATTTACACTAAGATATAGCTAGGGCTACCTCTAAAATTTGTGATATAAATTTTTTAGTGCTAGGTACAAATGTCATAGGTCCTAGGTACAAATTGACATTTGTAAAGTAAAGGTAGTCCTAGGTACAAATGTCATAGGTCCTAGGTACAAATTGACATTTGTAAAGGTAGTCCTAGGTACAATGTCAAAATTTAGTCTTCATCTTTTGTTTGAAGTTTATTCTTTTGTGCGAGTTGTATTTTTGTCATTTTGATTTGAGATTGCTCCTTCGAGGAATTTGGTCTTTCAGGTAGCTCAGTCAATAGTTGTTTGTTTGATAGTCGAGGAGTTTCTTTCTCATCCGCTCTTACGTGAGAACGGTTGGTTTTCGTGGTTTGTGGGAGTTAGTGTACCCTTGCTAAGTTCCATGTCTCTATTGGAGCCCTGTTTTTGTTTTGGTTTGCCTTTTGTTTGGGTTGATTTTCTGGTATGCACTTTGTATTGTTTCATTTACTCTCAATGCGAAGTCTGGAAGTTCATCAAAATAAAAACCGGTGCTCATTTCCAATACTTTAAATTGGGCCTGATCTGTACTTTCTTCACAGGAAAACCGCTGCTTCTTACAAAGAATTGGAGGCAAGGAGGAGTAGAGTCTGGGAATTAGAGAAACTTTATAGGGATATGAGATTTCAACAAGAACTAAGGGTACTTTTTAACATGTTTAAGTTTTCTGCTCCAGTTTGATAGATAGGTTGTATATATTAAAATTGTTGATTCTGAGACGATACGTGCTTATAACAGAAAATGGGCCGCAAACGTAAACGCCAAGAAGATGAACTCTCCAATCCAACTTCTAATCCTGTATACAAATGGCGGGCAGAACGAAAACGCTGAATAAGGTCTAATACTCTTGCTTTCTTCATACAATTTTAAGCATTTTTATTTAAGTAAACATCAAACTGCCCACGTTTATAAAGTTCTTGGGATCCTATGTGGGTTGCTAGTGGTGGGTTGCTAGTGGTGTAGTGCTAGGGGAGTGTAACGACGGAAGCCCCTTGCTAGTAGATATTATTTTTTTTGGGCTTTCTCTTTTGGATTTTCCCTCAAAATTTTTAAAACACATCTGCTAGGGAGAGGTTTCGTTCTCTTCCCCAATCAATATGGGATCTCACAAGTGGAGAGATTTGGGTTGTTGCATGATATTATTGTTTTATTGTTTTGGGCTTTGAAGATACGTAGGTTGGTAGCATAATATTATTGTTATTGGTGCACTGTTGGGCTCGTTTGATAACCATTTGATTTTTGGCTTTTGGATTTTAATTTTTGATTTTTGAAAATTAAGCTTATTACGTTTTGATATCTACTTTCTATTCATTTTTAAAATCATGCAAAGTTTTAAAAACTAAAAAAAAACAGTTTCCAAGAACTTGTATTTGTTATCTACTTTCTATCAATGTTTTCAAAAACCATGTAAAGTTTTTGAAACCGAAAAAACAGTTTTCAAGAACTTGTTTTCGTTTGTTTTCGTTTGTTTTGAAAATTGAAAAAACAGTTTTCAACAATTTGTTTTTGTTATCTATCTACTTTTCAAAAATCATGCAAAGTTTTGAGAACCGAAAAAACAGTTTTCAAGAACTTGTTTTTGTTTTCAGAGTTTGACTAAAATTCAAGACCAAGCTTTTTTTTTTTTTTTAATACAATCACAATCTAAGGATTGTTTTTCTTGATCAGTGTTGTGTATTAGGACTAGAACTATCAGGAATTGGACTGGAGATCGTTAAATATTTCTCTTTTAATTCCATATTTTATCATAATTTCATATTTTATTAGGACAGACCATTTTAAATTACCGTGTTAGGAATCATGACTCTTCACAACGATATGATATTGTCTACTTTGAGCATAAGCTCTCATGGGCCTCGTGTCAATGGAGATACTATTTCTTGCTTGTAATATAAAGCCATGATCATTCTCTAAATTAATCTATGTGAGACTCCTTTCCGACACTGCTCAACAAATTGATGATTCTATGATTCGCCTATTTGATTACCGTAGAATTATTTGCAATTTTCATGGAAACAGGACGAAGCACTGACGACCTAAATTTTGCAGAAGTAGGCTGACAAACACTCACTGACGACCTAAATTTTGGTTCCTTTGTTTTCATGCTATTTAATTAAGATGTTTTGTTTCTTCTATGAAGAATGTAATGACCGTACTGTTACTGTTTTTAGTTAGGAATATCAATATAGTTTGATTCATCAATAGCTAACAAATGGCCATTGTATCA

mRNA sequence

ATGAGGTCATCTCCATTCTTCATCGGAAACCCTAAACCCACTTTCTGCGTCTCACATCCCACCCCCAGCCTTATCAACTCCGGCGCCGACCTCGACGGCATAACCATCTATCGAACGGAGCGATCCGGCCACTCCGTTCACCCATTCTCTTCCGGCGCTAGCACCAACCGCAAACACCCGAGACGTGCGGCGGCGATGGCTCCTTCAAGAAATGCTATAGCCGACTTGGCGACTTCTTCCACCGATATCTACAGTGGTTCTGCTCCTCGACGGCATTCCGAATTGTCTAAATATTCTGATTTGGAATCCATCCCTGTAAACCATCTATCTTGTGTAGGATTCGTTCGATTTGCTATACGTTTAGTTGTAGGAAAACTAAGACACCGAGAACATTATTTGCTTGTAATTGCACGTTCTTCCGCTCTCTTGTTGAGTGCAATGCGGTCACTGAAGAATGCCATCCGTTCGCGGCTATACAGGAAGCGAGCTCGGCCGCATTCTCGGAGACATTTTGGGCTTTTTGAGAAACACAGAGACTATGTCAAGCGTGCTAAAGCTTATCATAAGAAGGAAGCCACTTTAGAGAAACTTGAAGAGAAATCAGCCTTCAGGAATCGAGATGAATTTTACTTTAAGATGATTAAGGCCAGAACAGTCCATAAACCAGAGAGACGGGTAAATAAGTATACTAAAGAGCAACTCATACTGATGAAAACCCAAGATGCAGAGTATATACTTCAGAAAATGCAGAGTGAGGAAAGGAAAATTGAAAAACTGACAGCCACGTTACATTCTTTTGATAATCAGCCATCAAATGAGCATCTTTACTTTGCTGAAGACAGGGAGGAGACCAATGAAATTCAATGTCGTTCCTCCAAAGGTAGATGGACAGCATTGTCTGAAACAGTTCCTAACAGTATTAAGAGGAAAACCGCTGCTTCTTACAAAGAATTGGAGGCAAGGAGGAGTAGAGTCTGGGAATTAGAGAAACTTTATAGGGATATGAGATTTCAACAAGAACTAAGGAAAATGGGCCGCAAACGTAAACGCCAAGAAGATGAACTCTCCAATCCAACTTCTAATCCTGTATACAAATGGCGGGCAGAACGAAAACGCTGAATAAGGACGAAGCACTGACGACCTAAATTTTGCAGAAGTAGGCTGACAAACACTCACTGACGACCTAAATTTTGGTTCCTTTGTTTTCATGCTATTTAATTAAGATGTTTTGTTTCTTCTATGAAGAATGTAATGACCGTACTGTTACTGTTTTTAGTTAGGAATATCAATATAGTTTGATTCATCAATAGCTAACAAATGGCCATTGTATCA

Coding sequence (CDS)

ATGAGGTCATCTCCATTCTTCATCGGAAACCCTAAACCCACTTTCTGCGTCTCACATCCCACCCCCAGCCTTATCAACTCCGGCGCCGACCTCGACGGCATAACCATCTATCGAACGGAGCGATCCGGCCACTCCGTTCACCCATTCTCTTCCGGCGCTAGCACCAACCGCAAACACCCGAGACGTGCGGCGGCGATGGCTCCTTCAAGAAATGCTATAGCCGACTTGGCGACTTCTTCCACCGATATCTACAGTGGTTCTGCTCCTCGACGGCATTCCGAATTGTCTAAATATTCTGATTTGGAATCCATCCCTGTAAACCATCTATCTTGTGTAGGATTCGTTCGATTTGCTATACGTTTAGTTGTAGGAAAACTAAGACACCGAGAACATTATTTGCTTGTAATTGCACGTTCTTCCGCTCTCTTGTTGAGTGCAATGCGGTCACTGAAGAATGCCATCCGTTCGCGGCTATACAGGAAGCGAGCTCGGCCGCATTCTCGGAGACATTTTGGGCTTTTTGAGAAACACAGAGACTATGTCAAGCGTGCTAAAGCTTATCATAAGAAGGAAGCCACTTTAGAGAAACTTGAAGAGAAATCAGCCTTCAGGAATCGAGATGAATTTTACTTTAAGATGATTAAGGCCAGAACAGTCCATAAACCAGAGAGACGGGTAAATAAGTATACTAAAGAGCAACTCATACTGATGAAAACCCAAGATGCAGAGTATATACTTCAGAAAATGCAGAGTGAGGAAAGGAAAATTGAAAAACTGACAGCCACGTTACATTCTTTTGATAATCAGCCATCAAATGAGCATCTTTACTTTGCTGAAGACAGGGAGGAGACCAATGAAATTCAATGTCGTTCCTCCAAAGGTAGATGGACAGCATTGTCTGAAACAGTTCCTAACAGTATTAAGAGGAAAACCGCTGCTTCTTACAAAGAATTGGAGGCAAGGAGGAGTAGAGTCTGGGAATTAGAGAAACTTTATAGGGATATGAGATTTCAACAAGAACTAAGGAAAATGGGCCGCAAACGTAAACGCCAAGAAGATGAACTCTCCAATCCAACTTCTAATCCTGTATACAAATGGCGGGCAGAACGAAAACGCTGA

Protein sequence

MRSSPFFIGNPKPTFCVSHPTPSLINSGADLDGITIYRTERSGHSVHPFSSGASTNRKHPRRAAAMAPSRNAIADLATSSTDIYSGSAPRRHSELSKYSDLESIPVNHLSCVGFVRFAIRLVVGKLRHREHYLLVIARSSALLLSAMRSLKNAIRSRLYRKRARPHSRRHFGLFEKHRDYVKRAKAYHKKEATLEKLEEKSAFRNRDEFYFKMIKARTVHKPERRVNKYTKEQLILMKTQDAEYILQKMQSEERKIEKLTATLHSFDNQPSNEHLYFAEDREETNEIQCRSSKGRWTALSETVPNSIKRKTAASYKELEARRSRVWELEKLYRDMRFQQELRKMGRKRKRQEDELSNPTSNPVYKWRAERKR

Homology

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BLAST of CmoCh09G011640 vs. ExPASy Swiss-Prot
Match: Q8S1Z1 (Probable U3 small nucleolar RNA-associated protein 11 OS=Oryza sativa subsp. japonica OX=39947 GN=Os01g0810000 PE=2 SV=2)

HSP 1 Score: 252.3 bits (643), Expect = 8.6e-66
Identity = 133/229 (58.08%), Postives = 180/229 (78.60%), Query Frame = 0


Query: 147 MRSLKNAIRSRLYRKRARPHSRRHFGLFEKHRDYVKRAKAYHKKEATLEKLEEKSAFRNR 206
           M SL+NAI+ R +++RA+P SR+ FGL EKH+DY+ RAKA+H+KE T+ KL+EK++FRN 
Sbjct: 1   MSSLRNAIQRRAHKERAQPESRKKFGLLEKHKDYIVRAKAFHQKEETIRKLKEKASFRNP 60

Query: 207 DEFYFKMIKARTV---HKPERRVNKYTKEQLILMKTQDAEYILQKMQSEERKIEKLTATL 266
           DEFYFKMI ++TV   H+P+   NKYT+++L+L+KT+D  YILQ +QSE++KIEKL++ L
Sbjct: 61  DEFYFKMINSKTVDGIHRPKPEANKYTEDELMLLKTKDMGYILQGIQSEKKKIEKLSSML 120

Query: 267 HSFDNQPSNEHLYFAEDREETNEIQCRSSKGRWTALSETVPNSIKRKTAASYKELEARRS 326
           H  DN+  N+H+YFAEDREE  EIQ R  +   +   + +P+ IKRKTA+SY+ELE R+ 
Sbjct: 121 HELDNKRPNKHVYFAEDREEVKEIQSRIEQKSSSLGLDNIPSRIKRKTASSYRELEERKQ 180

Query: 327 RVWELEKLYRDMRFQQELRKMGRKRKRQEDELSNPTSNPVYKWRAERKR 373
           RV +LEKLY DM  Q+EL+K GRKRK +EDE+ N TS PVYKWRA+RKR
Sbjct: 181 RVQKLEKLYADMALQKELKKPGRKRKLREDEIENQTSRPVYKWRAQRKR 229

[Close]

BLAST of CmoCh09G011640 vs. ExPASy Swiss-Prot
Match: Q9M223 (Probable U3 small nucleolar RNA-associated protein 11 OS=Arabidopsis thaliana OX=3702 GN=At3g60360 PE=1 SV=1)

HSP 1 Score: 216.1 bits (549), Expect = 6.8e-55
Identity = 117/229 (51.09%), Postives = 165/229 (72.05%), Query Frame = 0


Query: 147 MRSLKNAIRSRLYRKRARPHSRRHFGLFEKHRDYVKRAKAYHKKEATLEKLEEKSAFRNR 206
           M SL+NAI    +++R++P +R+ FG+ EKH+DY+ RA AYHKK+ TL+ L +K+AF+N 
Sbjct: 1   MSSLRNAIPRPAHKERSQPEARKRFGILEKHKDYIIRANAYHKKQETLKILRQKAAFKNP 60

Query: 207 DEFYFKMIKARTV---HKPERRVNKYTKEQLILMKTQDAEYILQKMQSEERKIEKLTATL 266
           DEF FKMI ++TV   H+P+  VNKY+ E+L++MKTQD  Y+ QK QSE+ KI+KLTA+L
Sbjct: 61  DEFNFKMINSKTVDGRHRPKDEVNKYSAEELMIMKTQDIGYVFQKWQSEKNKIDKLTASL 120

Query: 267 HSFDNQPSNEHLYFAEDREETNEIQCRSSKGRWTALSETVPNSIKRKTAASYKELEARRS 326
               +Q S  H+Y+AEDREE  E++ +  + +    +  +P  IK+K   SY++LE R+S
Sbjct: 121 QCTGDQSSRRHVYYAEDREEARELEVQ-GRSKSDISTVEIPKDIKKKMDRSYRDLEGRKS 180

Query: 327 RVWELEKLYRDMRFQQELRKMGRKRKRQEDELSNPTSNPVYKWRAERKR 373
           R  +LEKLY DM  Q+EL+K GRKRK ++DEL NP    VYKWRA+RKR
Sbjct: 181 RAKDLEKLYTDMSMQKELQKKGRKRKLRDDELLNPNGKAVYKWRADRKR 228

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BLAST of CmoCh09G011640 vs. ExPASy Swiss-Prot
Match: Q9W3C0 (Probable U3 small nucleolar RNA-associated protein 11 OS=Drosophila melanogaster OX=7227 GN=CG1789 PE=2 SV=1)

HSP 1 Score: 88.2 bits (217), Expect = 2.1e-16
Identity = 85/248 (34.27%), Postives = 129/248 (52.02%), Query Frame = 0


Query: 147 MRSLKNAIRS--RLYRKRARPHSRRHFGLFEKHRDYVKRAKAYHKKEATLEKLEEKSAFR 206
           M S KNA +S  +++R+R +P SR+H G  EK +DY KRA    KK+ TL+ L  ++  +
Sbjct: 1   MSSWKNASKSNQKVHRERHQPESRQHLGFLEKKKDYKKRAIDAQKKQKTLKLLYRRAQNK 60

Query: 207 NRDEFYFKMIKAR---TVHKPERRVNKYTKEQLILMKTQDAEYILQKMQSEERKIEKLTA 266
           N DEFY  MI ++     H  +   +++T EQL LM+TQD +Y++ K   E +KIE+L A
Sbjct: 61  NPDEFYHHMINSKLSNDEHHEKDTKDEHTPEQLALMQTQDLKYVVMKRTMERKKIERLKA 120

Query: 267 TLHSFD--NQPSNEHLYFAE---------------DREETNEIQCRSSKGRWTALSETVP 326
           +L   D     +N+ + F E               D EE  E + + SK        T P
Sbjct: 121 SLVDVDAIKGAANKRIKFDEDGYMELDMGEWLLKHDDEEEEEEKKKKSK-------TTEP 180

Query: 327 NSIKRKTAASYKELEARRSRVWELEKLYRDMRFQQELRKMGRKRKRQEDELSNPTSNPVY 373
           N IK++      EL+ R  R  EL  + + ++ +  L K  R  K ++ +     S PVY
Sbjct: 181 NPIKQQ---RINELKKREQRERELGIVQQKIQLKNTL-KQPRLLKPRKIKPGTKDSAPVY 237

[Close]

BLAST of CmoCh09G011640 vs. ExPASy Swiss-Prot
Match: Q8R5K5 (Probable U3 small nucleolar RNA-associated protein 11 OS=Rattus norvegicus OX=10116 GN=Utp11 PE=2 SV=1)

HSP 1 Score: 87.0 bits (214), Expect = 4.8e-16
Identity = 73/245 (29.80%), Postives = 125/245 (51.02%), Query Frame = 0


Query: 155 RSRLYRKRARPHSRRHFGLFEKHRDYVKRAKAYHKKEATLEKLEEKSAFRNRDEFYFKMI 214
           R R YR+R++P  R+H GL EK +DY  RA  Y KK+  L+ L +K+  +N DEFY+KM 
Sbjct: 12  RQREYRERSQPGFRKHLGLLEKKKDYKLRADDYRKKQEYLKALRKKALEKNPDEFYYKMT 71

Query: 215 KART---VHKPERRVNKYTKEQLILMKTQDAEYILQKMQSEERKIEKLTATLH--SFDNQ 274
           + +    VH  +    + T EQL LM+TQD +YI  K  +E +KIE+L + LH   F  +
Sbjct: 72  RVKLQDGVHIIKETKEEVTPEQLKLMRTQDVKYIEMKRVAEAKKIERLKSELHLLDFQGK 131

Query: 275 PSNEHLYFAEDREETNEIQCRSSKGRWTALSETVPN-------------------SIKRK 334
             N H++F + ++E  +    +       L + V N                    +KR 
Sbjct: 132 QQNRHVFFFDTKKEVEQFDVAAHLQTAPELVDRVFNRPRIETLQKEKVKGVTNQTGLKRI 191

Query: 335 TAASYKELEARRSRVWELEKLY---RDMRFQQELRKMGRKRKRQEDELSNPTSNPVYKWR 373
                K+      R+   +KL+   + ++ +++L    +K K +++ +++P    +YK++
Sbjct: 192 AKERQKQYNCLTQRIEREKKLFVIAQKIQTRKDLMDKTQKVKVKKETVNSPA---IYKFQ 251

[Close]

BLAST of CmoCh09G011640 vs. ExPASy Swiss-Prot
Match: Q9Y3A2 (Probable U3 small nucleolar RNA-associated protein 11 OS=Homo sapiens OX=9606 GN=UTP11 PE=1 SV=2)

HSP 1 Score: 85.5 bits (210), Expect = 1.4e-15
Identity = 72/245 (29.39%), Postives = 126/245 (51.43%), Query Frame = 0


Query: 155 RSRLYRKRARPHSRRHFGLFEKHRDYVKRAKAYHKKEATLEKLEEKSAFRNRDEFYFKMI 214
           R R +R+R++P  R+H GL EK +DY  RA  Y KK+  L+ L +K+  +N DEFY+KM 
Sbjct: 12  RQREHRERSQPGFRKHLGLLEKKKDYKLRADDYRKKQEYLKALRKKALEKNPDEFYYKMT 71

Query: 215 KART---VHKPERRVNKYTKEQLILMKTQDAEYILQKMQSEERKIEKLTATLH--SFDNQ 274
           + +    VH  +    + T EQL LM+TQD +YI  K  +E +KIE+L + LH   F  +
Sbjct: 72  RVKLQDGVHIIKETKEEVTPEQLKLMRTQDVKYIEMKRVAEAKKIERLKSELHLLDFQGK 131

Query: 275 PSNEHLYFAEDREETNEIQCRSSKGRWTALSETVPN-------------------SIKRK 334
             N+H++F + ++E  +    +       L + V N                    +KR 
Sbjct: 132 QQNKHVFFFDTKKEVEQFDVATHLQTAPELVDRVFNRPRIETLQKEKVKGVTNQTGLKRI 191

Query: 335 TAASYKELEARRSRVWELEKLY---RDMRFQQELRKMGRKRKRQEDELSNPTSNPVYKWR 373
                K+      R+   +KL+   + ++ +++L    +K K +++ +++P    +YK++
Sbjct: 192 AKERQKQYNCLTQRIEREKKLFVIAQKIQTRKDLMDKTQKVKVKKETVNSPA---IYKFQ 251

[Close]

BLAST of CmoCh09G011640 vs. ExPASy TrEMBL
Match: A0A6J1EWL8 (U3 small nucleolar RNA-associated protein 11 OS=Cucurbita moschata OX=3662 GN=LOC111439031 PE=3 SV=1)

HSP 1 Score: 431.4 bits (1108), Expect = 3.8e-117
Identity = 226/226 (100.00%), Postives = 226/226 (100.00%), Query Frame = 0


Query: 147 MRSLKNAIRSRLYRKRARPHSRRHFGLFEKHRDYVKRAKAYHKKEATLEKLEEKSAFRNR 206
           MRSLKNAIRSRLYRKRARPHSRRHFGLFEKHRDYVKRAKAYHKKEATLEKLEEKSAFRNR
Sbjct: 1   MRSLKNAIRSRLYRKRARPHSRRHFGLFEKHRDYVKRAKAYHKKEATLEKLEEKSAFRNR 60

Query: 207 DEFYFKMIKARTVHKPERRVNKYTKEQLILMKTQDAEYILQKMQSEERKIEKLTATLHSF 266
           DEFYFKMIKARTVHKPERRVNKYTKEQLILMKTQDAEYILQKMQSEERKIEKLTATLHSF
Sbjct: 61  DEFYFKMIKARTVHKPERRVNKYTKEQLILMKTQDAEYILQKMQSEERKIEKLTATLHSF 120

Query: 267 DNQPSNEHLYFAEDREETNEIQCRSSKGRWTALSETVPNSIKRKTAASYKELEARRSRVW 326
           DNQPSNEHLYFAEDREETNEIQCRSSKGRWTALSETVPNSIKRKTAASYKELEARRSRVW
Sbjct: 121 DNQPSNEHLYFAEDREETNEIQCRSSKGRWTALSETVPNSIKRKTAASYKELEARRSRVW 180

Query: 327 ELEKLYRDMRFQQELRKMGRKRKRQEDELSNPTSNPVYKWRAERKR 373
           ELEKLYRDMRFQQELRKMGRKRKRQEDELSNPTSNPVYKWRAERKR
Sbjct: 181 ELEKLYRDMRFQQELRKMGRKRKRQEDELSNPTSNPVYKWRAERKR 226

[Close]

BLAST of CmoCh09G011640 vs. ExPASy TrEMBL
Match: A0A6J1IQ26 (U3 small nucleolar RNA-associated protein 11 OS=Cucurbita maxima OX=3661 GN=LOC111477158 PE=3 SV=1)

HSP 1 Score: 404.4 bits (1038), Expect = 5.0e-109
Identity = 214/227 (94.27%), Postives = 219/227 (96.48%), Query Frame = 0


Query: 147 MRSLKNAIRSRLYRKRARPHSRRHFGLFEKHRDYVKRAKAYHKKEATLEKLEEKSAFRNR 206
           MRSLKNAIRSRLY+KRARPHSR+HFGL EKH+ YVKRAKAYHKKEATLEKLE+K+AF NR
Sbjct: 1   MRSLKNAIRSRLYKKRARPHSRKHFGLSEKHKHYVKRAKAYHKKEATLEKLEKKAAFWNR 60

Query: 207 DEFYFK-MIKARTVHKPERRVNKYTKEQLILMKTQDAEYILQKMQSEERKIEKLTATLHS 266
           DEFYFK MIK RTVHKPERRVNKYTKEQLILMK QDAEYILQKMQSEERKIEKLTATLHS
Sbjct: 61  DEFYFKMMIKTRTVHKPERRVNKYTKEQLILMKAQDAEYILQKMQSEERKIEKLTATLHS 120

Query: 267 FDNQPSNEHLYFAEDREETNEIQCRSSKGRWTALSETVPNSIKRKTAASYKELEARRSRV 326
           FDNQPSNEHLYFAEDREETNEIQCRSSKGRW ALSETVPNSIKRKTA SYKELEARRSRV
Sbjct: 121 FDNQPSNEHLYFAEDREETNEIQCRSSKGRWIALSETVPNSIKRKTATSYKELEARRSRV 180

Query: 327 WELEKLYRDMRFQQELRKMGRKRKRQEDELSNPTSNPVYKWRAERKR 373
           WELEKLYRDMRFQQELRKMGRKRKRQEDELSNPTSNPVYKWRAERKR
Sbjct: 181 WELEKLYRDMRFQQELRKMGRKRKRQEDELSNPTSNPVYKWRAERKR 227

[Close]

BLAST of CmoCh09G011640 vs. ExPASy TrEMBL
Match: A0A6J1IKV8 (U3 small nucleolar RNA-associated protein 11 OS=Cucurbita maxima OX=3661 GN=LOC111477158 PE=3 SV=1)

HSP 1 Score: 396.4 bits (1017), Expect = 1.4e-106
Identity = 212/227 (93.39%), Postives = 217/227 (95.59%), Query Frame = 0


Query: 147 MRSLKNAIRSRLYRKRARPHSRRHFGLFEKHRDYVKRAKAYHKKEATLEKLEEKSAFRNR 206
           MRSLKNAIRSRLY+KRARPHSR+HFGL EKH+ YVKRAKAYHKKEAT  KLE+K+AF NR
Sbjct: 1   MRSLKNAIRSRLYKKRARPHSRKHFGLSEKHKHYVKRAKAYHKKEAT--KLEKKAAFWNR 60

Query: 207 DEFYFK-MIKARTVHKPERRVNKYTKEQLILMKTQDAEYILQKMQSEERKIEKLTATLHS 266
           DEFYFK MIK RTVHKPERRVNKYTKEQLILMK QDAEYILQKMQSEERKIEKLTATLHS
Sbjct: 61  DEFYFKMMIKTRTVHKPERRVNKYTKEQLILMKAQDAEYILQKMQSEERKIEKLTATLHS 120

Query: 267 FDNQPSNEHLYFAEDREETNEIQCRSSKGRWTALSETVPNSIKRKTAASYKELEARRSRV 326
           FDNQPSNEHLYFAEDREETNEIQCRSSKGRW ALSETVPNSIKRKTA SYKELEARRSRV
Sbjct: 121 FDNQPSNEHLYFAEDREETNEIQCRSSKGRWIALSETVPNSIKRKTATSYKELEARRSRV 180

Query: 327 WELEKLYRDMRFQQELRKMGRKRKRQEDELSNPTSNPVYKWRAERKR 373
           WELEKLYRDMRFQQELRKMGRKRKRQEDELSNPTSNPVYKWRAERKR
Sbjct: 181 WELEKLYRDMRFQQELRKMGRKRKRQEDELSNPTSNPVYKWRAERKR 225

[Close]

BLAST of CmoCh09G011640 vs. ExPASy TrEMBL
Match: A0A5A7V1R2 (U3 small nucleolar RNA-associated protein 11 OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold39G00040 PE=3 SV=1)

HSP 1 Score: 324.3 bits (830), Expect = 6.5e-85
Identity = 175/229 (76.42%), Postives = 197/229 (86.03%), Query Frame = 0


Query: 147 MRSLKNAIRSRLYRKRARPHSRRHFGLFEKHRDYVKRAKAYHKKEATLEKLEEKSAFRNR 206
           M+SLKNA+ +R Y++RA+ HSR+ FGL EKH+DYV+RAKAYHKKE TLEKL++K+ F+N 
Sbjct: 1   MKSLKNAVPTRPYKERAQLHSRKKFGLLEKHKDYVERAKAYHKKEDTLEKLKQKAVFKNP 60

Query: 207 DEFYFKMIKARTV---HKPERRVNKYTKEQLILMKTQDAEYILQKMQSEERKIEKLTATL 266
           DEFYFKMI+ RTV   H+P R VNKYT EQL+LMKTQ A YIL KMQSEERKIE+LTATL
Sbjct: 61  DEFYFKMIRTRTVDGIHRPGRLVNKYTAEQLLLMKTQGAGYILHKMQSEERKIERLTATL 120

Query: 267 HSFDNQPSNEHLYFAEDREETNEIQCRSSKGRWTALSETVPNSIKRKTAASYKELEARRS 326
           HS DN+PSNEH+YFAEDR+E +EIQ  S KGR  A SE V NSIKRKT ASYKELEARRS
Sbjct: 121 HSLDNEPSNEHIYFAEDRDEADEIQSCSPKGRLVASSEAVHNSIKRKTTASYKELEARRS 180

Query: 327 RVWELEKLYRDMRFQQELRKMGRKRKRQEDELSNPTSNPVYKWRAERKR 373
           RVWELEKLYRD+R QQELRKMGRKRK  EDELSNPTSNPVYKWRAERKR
Sbjct: 181 RVWELEKLYRDIRLQQELRKMGRKRKLWEDELSNPTSNPVYKWRAERKR 229

[Close]

BLAST of CmoCh09G011640 vs. ExPASy TrEMBL
Match: A0A1S3CEP1 (U3 small nucleolar RNA-associated protein 11 OS=Cucumis melo OX=3656 GN=LOC103500047 PE=3 SV=1)

HSP 1 Score: 324.3 bits (830), Expect = 6.5e-85
Identity = 175/229 (76.42%), Postives = 197/229 (86.03%), Query Frame = 0


Query: 147 MRSLKNAIRSRLYRKRARPHSRRHFGLFEKHRDYVKRAKAYHKKEATLEKLEEKSAFRNR 206
           M+SLKNA+ +R Y++RA+ HSR+ FGL EKH+DYV+RAKAYHKKE TLEKL++K+ F+N 
Sbjct: 1   MKSLKNAVPTRPYKERAQLHSRKKFGLLEKHKDYVERAKAYHKKEDTLEKLKQKAVFKNP 60

Query: 207 DEFYFKMIKARTV---HKPERRVNKYTKEQLILMKTQDAEYILQKMQSEERKIEKLTATL 266
           DEFYFKMI+ RTV   H+P R VNKYT EQL+LMKTQ A YIL KMQSEERKIE+LTATL
Sbjct: 61  DEFYFKMIRTRTVDGIHRPGRLVNKYTAEQLLLMKTQGAGYILHKMQSEERKIERLTATL 120

Query: 267 HSFDNQPSNEHLYFAEDREETNEIQCRSSKGRWTALSETVPNSIKRKTAASYKELEARRS 326
           HS DN+PSNEH+YFAEDR+E +EIQ  S KGR  A SE V NSIKRKT ASYKELEARRS
Sbjct: 121 HSLDNEPSNEHIYFAEDRDEADEIQSCSPKGRLVASSEAVHNSIKRKTTASYKELEARRS 180

Query: 327 RVWELEKLYRDMRFQQELRKMGRKRKRQEDELSNPTSNPVYKWRAERKR 373
           RVWELEKLYRD+R QQELRKMGRKRK  EDELSNPTSNPVYKWRAERKR
Sbjct: 181 RVWELEKLYRDIRLQQELRKMGRKRKLWEDELSNPTSNPVYKWRAERKR 229

[Close]

BLAST of CmoCh09G011640 vs. NCBI nr
Match: XP_022932535.1 (probable U3 small nucleolar RNA-associated protein 11 [Cucurbita moschata] >XP_022932536.1 probable U3 small nucleolar RNA-associated protein 11 [Cucurbita moschata])

HSP 1 Score: 431.4 bits (1108), Expect = 7.9e-117
Identity = 226/226 (100.00%), Postives = 226/226 (100.00%), Query Frame = 0


Query: 147 MRSLKNAIRSRLYRKRARPHSRRHFGLFEKHRDYVKRAKAYHKKEATLEKLEEKSAFRNR 206
           MRSLKNAIRSRLYRKRARPHSRRHFGLFEKHRDYVKRAKAYHKKEATLEKLEEKSAFRNR
Sbjct: 1   MRSLKNAIRSRLYRKRARPHSRRHFGLFEKHRDYVKRAKAYHKKEATLEKLEEKSAFRNR 60

Query: 207 DEFYFKMIKARTVHKPERRVNKYTKEQLILMKTQDAEYILQKMQSEERKIEKLTATLHSF 266
           DEFYFKMIKARTVHKPERRVNKYTKEQLILMKTQDAEYILQKMQSEERKIEKLTATLHSF
Sbjct: 61  DEFYFKMIKARTVHKPERRVNKYTKEQLILMKTQDAEYILQKMQSEERKIEKLTATLHSF 120

Query: 267 DNQPSNEHLYFAEDREETNEIQCRSSKGRWTALSETVPNSIKRKTAASYKELEARRSRVW 326
           DNQPSNEHLYFAEDREETNEIQCRSSKGRWTALSETVPNSIKRKTAASYKELEARRSRVW
Sbjct: 121 DNQPSNEHLYFAEDREETNEIQCRSSKGRWTALSETVPNSIKRKTAASYKELEARRSRVW 180

Query: 327 ELEKLYRDMRFQQELRKMGRKRKRQEDELSNPTSNPVYKWRAERKR 373
           ELEKLYRDMRFQQELRKMGRKRKRQEDELSNPTSNPVYKWRAERKR
Sbjct: 181 ELEKLYRDMRFQQELRKMGRKRKRQEDELSNPTSNPVYKWRAERKR 226

[Close]

BLAST of CmoCh09G011640 vs. NCBI nr
Match: KAG6592237.1 (putative U3 small nucleolar RNA-associated protein 11, partial [Cucurbita argyrosperma subsp. sororia])

HSP 1 Score: 423.7 bits (1088), Expect = 1.6e-114
Identity = 221/226 (97.79%), Postives = 224/226 (99.12%), Query Frame = 0


Query: 147 MRSLKNAIRSRLYRKRARPHSRRHFGLFEKHRDYVKRAKAYHKKEATLEKLEEKSAFRNR 206
           MRSLKNAIRSRLY+KRARPHSRRHFGLFEKHRDYVKRAKAYHKKEATLEKLEEK+AFRNR
Sbjct: 1   MRSLKNAIRSRLYKKRARPHSRRHFGLFEKHRDYVKRAKAYHKKEATLEKLEEKAAFRNR 60

Query: 207 DEFYFKMIKARTVHKPERRVNKYTKEQLILMKTQDAEYILQKMQSEERKIEKLTATLHSF 266
           DEFYFKMIK RTVHKPERRVNKYTKEQLILMKTQDAEYILQKMQSEERKIEKLTATLHSF
Sbjct: 61  DEFYFKMIKTRTVHKPERRVNKYTKEQLILMKTQDAEYILQKMQSEERKIEKLTATLHSF 120

Query: 267 DNQPSNEHLYFAEDREETNEIQCRSSKGRWTALSETVPNSIKRKTAASYKELEARRSRVW 326
           DNQPSNEHLYFAE+REETNEIQCRSSKGRW ALSETVPNSIKRKTAASYKELEARRSRVW
Sbjct: 121 DNQPSNEHLYFAEEREETNEIQCRSSKGRWIALSETVPNSIKRKTAASYKELEARRSRVW 180

Query: 327 ELEKLYRDMRFQQELRKMGRKRKRQEDELSNPTSNPVYKWRAERKR 373
           ELEKLYRDMRFQQELRKMGRKRKRQEDELSNPTSNPVYKWRAERKR
Sbjct: 181 ELEKLYRDMRFQQELRKMGRKRKRQEDELSNPTSNPVYKWRAERKR 226

[Close]

BLAST of CmoCh09G011640 vs. NCBI nr
Match: KAG7020976.1 (putative U3 small nucleolar RNA-associated protein 11 [Cucurbita argyrosperma subsp. argyrosperma])

HSP 1 Score: 416.8 bits (1070), Expect = 2.0e-112
Identity = 221/233 (94.85%), Postives = 224/233 (96.14%), Query Frame = 0


Query: 147 MRSLKNAIRSRLYRKRARPHSRRHFGLFEKHRDYVKRAKAYHKKEATLEKLEEKSAFRNR 206
           MRSLKNAIRSRLY+KRARPHSRRHFGLFEKHRDYVKRAKAYHKKEATLEKLEEK+AFRNR
Sbjct: 1   MRSLKNAIRSRLYKKRARPHSRRHFGLFEKHRDYVKRAKAYHKKEATLEKLEEKAAFRNR 60

Query: 207 DEFYFKMIKARTVHKPERRVNKYTKEQLILMKTQDAEYILQKMQSEERKIEKLTATLHSF 266
           DEFYFKMIK RTVHKPERRVNKYTKEQLILMKTQDAEYILQKMQSEERKIEKLTATLHSF
Sbjct: 61  DEFYFKMIKTRTVHKPERRVNKYTKEQLILMKTQDAEYILQKMQSEERKIEKLTATLHSF 120

Query: 267 DNQPSNEHLYFAEDREETNEIQCRSSKGRWTALSETVPNSIK-------RKTAASYKELE 326
           DNQPSNEHLYFAE+REETNEIQCRSSKGRW ALSETVPNSIK       RKTAASYKELE
Sbjct: 121 DNQPSNEHLYFAEEREETNEIQCRSSKGRWIALSETVPNSIKSEALFLHRKTAASYKELE 180

Query: 327 ARRSRVWELEKLYRDMRFQQELRKMGRKRKRQEDELSNPTSNPVYKWRAERKR 373
           ARRSRVWELEKLYRDMRFQQELRKMGRKRKRQEDELSNPTSNPVYKWRAERKR
Sbjct: 181 ARRSRVWELEKLYRDMRFQQELRKMGRKRKRQEDELSNPTSNPVYKWRAERKR 233

[Close]

BLAST of CmoCh09G011640 vs. NCBI nr
Match: XP_022976937.1 (probable U3 small nucleolar RNA-associated protein 11 isoform X1 [Cucurbita maxima] >XP_022976938.1 probable U3 small nucleolar RNA-associated protein 11 isoform X1 [Cucurbita maxima] >XP_022976939.1 probable U3 small nucleolar RNA-associated protein 11 isoform X1 [Cucurbita maxima])

HSP 1 Score: 404.4 bits (1038), Expect = 1.0e-108
Identity = 214/227 (94.27%), Postives = 219/227 (96.48%), Query Frame = 0


Query: 147 MRSLKNAIRSRLYRKRARPHSRRHFGLFEKHRDYVKRAKAYHKKEATLEKLEEKSAFRNR 206
           MRSLKNAIRSRLY+KRARPHSR+HFGL EKH+ YVKRAKAYHKKEATLEKLE+K+AF NR
Sbjct: 1   MRSLKNAIRSRLYKKRARPHSRKHFGLSEKHKHYVKRAKAYHKKEATLEKLEKKAAFWNR 60

Query: 207 DEFYFK-MIKARTVHKPERRVNKYTKEQLILMKTQDAEYILQKMQSEERKIEKLTATLHS 266
           DEFYFK MIK RTVHKPERRVNKYTKEQLILMK QDAEYILQKMQSEERKIEKLTATLHS
Sbjct: 61  DEFYFKMMIKTRTVHKPERRVNKYTKEQLILMKAQDAEYILQKMQSEERKIEKLTATLHS 120

Query: 267 FDNQPSNEHLYFAEDREETNEIQCRSSKGRWTALSETVPNSIKRKTAASYKELEARRSRV 326
           FDNQPSNEHLYFAEDREETNEIQCRSSKGRW ALSETVPNSIKRKTA SYKELEARRSRV
Sbjct: 121 FDNQPSNEHLYFAEDREETNEIQCRSSKGRWIALSETVPNSIKRKTATSYKELEARRSRV 180

Query: 327 WELEKLYRDMRFQQELRKMGRKRKRQEDELSNPTSNPVYKWRAERKR 373
           WELEKLYRDMRFQQELRKMGRKRKRQEDELSNPTSNPVYKWRAERKR
Sbjct: 181 WELEKLYRDMRFQQELRKMGRKRKRQEDELSNPTSNPVYKWRAERKR 227

[Close]

BLAST of CmoCh09G011640 vs. NCBI nr
Match: XP_023535289.1 (probable U3 small nucleolar RNA-associated protein 11 isoform X1 [Cucurbita pepo subsp. pepo])

HSP 1 Score: 400.2 bits (1027), Expect = 1.9e-107
Identity = 211/226 (93.36%), Postives = 216/226 (95.58%), Query Frame = 0


Query: 147 MRSLKNAIRSRLYRKRARPHSRRHFGLFEKHRDYVKRAKAYHKKEATLEKLEEKSAFRNR 206
           MRSLKN IRSRLY+KRARPHSRRHFGLFEKHRDYVKRAKAY KKEAT+EKLE K+AFRN 
Sbjct: 1   MRSLKNVIRSRLYKKRARPHSRRHFGLFEKHRDYVKRAKAYQKKEATVEKLEGKTAFRNP 60

Query: 207 DEFYFKMIKARTVHKPERRVNKYTKEQLILMKTQDAEYILQKMQSEERKIEKLTATLHSF 266
           DEFYFKMIK RTVHKPERRVNKYTKEQLILMKTQDAEYILQKMQSEERKIE+LTATLHSF
Sbjct: 61  DEFYFKMIKTRTVHKPERRVNKYTKEQLILMKTQDAEYILQKMQSEERKIERLTATLHSF 120

Query: 267 DNQPSNEHLYFAEDREETNEIQCRSSKGRWTALSETVPNSIKRKTAASYKELEARRSRVW 326
           DNQPSNEHL FAEDRE+TNEIQCRSSKGRW AL ETVPNSIKRKTAASYKELEARRSRVW
Sbjct: 121 DNQPSNEHLCFAEDREDTNEIQCRSSKGRWIALYETVPNSIKRKTAASYKELEARRSRVW 180

Query: 327 ELEKLYRDMRFQQELRKMGRKRKRQEDELSNPTSNPVYKWRAERKR 373
           ELEKLYRDMRFQQEL KMGRKRKRQEDELSNPTSNPVYKWRA RKR
Sbjct: 181 ELEKLYRDMRFQQELWKMGRKRKRQEDELSNPTSNPVYKWRAGRKR 226

[Close]

BLAST of CmoCh09G011640 vs. TAIR 10
Match: AT3G60360.1 (embryo sac development arrest 14 )

HSP 1 Score: 216.1 bits (549), Expect = 4.8e-56
Identity = 117/229 (51.09%), Postives = 165/229 (72.05%), Query Frame = 0


Query: 147 MRSLKNAIRSRLYRKRARPHSRRHFGLFEKHRDYVKRAKAYHKKEATLEKLEEKSAFRNR 206
           M SL+NAI    +++R++P +R+ FG+ EKH+DY+ RA AYHKK+ TL+ L +K+AF+N 
Sbjct: 1   MSSLRNAIPRPAHKERSQPEARKRFGILEKHKDYIIRANAYHKKQETLKILRQKAAFKNP 60

Query: 207 DEFYFKMIKARTV---HKPERRVNKYTKEQLILMKTQDAEYILQKMQSEERKIEKLTATL 266
           DEF FKMI ++TV   H+P+  VNKY+ E+L++MKTQD  Y+ QK QSE+ KI+KLTA+L
Sbjct: 61  DEFNFKMINSKTVDGRHRPKDEVNKYSAEELMIMKTQDIGYVFQKWQSEKNKIDKLTASL 120

Query: 267 HSFDNQPSNEHLYFAEDREETNEIQCRSSKGRWTALSETVPNSIKRKTAASYKELEARRS 326
               +Q S  H+Y+AEDREE  E++ +  + +    +  +P  IK+K   SY++LE R+S
Sbjct: 121 QCTGDQSSRRHVYYAEDREEARELEVQ-GRSKSDISTVEIPKDIKKKMDRSYRDLEGRKS 180

Query: 327 RVWELEKLYRDMRFQQELRKMGRKRKRQEDELSNPTSNPVYKWRAERKR 373
           R  +LEKLY DM  Q+EL+K GRKRK ++DEL NP    VYKWRA+RKR
Sbjct: 181 RAKDLEKLYTDMSMQKELQKKGRKRKLRDDELLNPNGKAVYKWRADRKR 228

The following BLAST results are available for this feature:

BLAST of CmoCh09G011640 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
Q8S1Z1	8.6e-66	58.08	Probable U3 small nucleolar RNA-associated protein 11 OS=Oryza sativa subsp. jap...	[more]
Q9M223	6.8e-55	51.09	Probable U3 small nucleolar RNA-associated protein 11 OS=Arabidopsis thaliana OX...	[more]
Q9W3C0	2.1e-16	34.27	Probable U3 small nucleolar RNA-associated protein 11 OS=Drosophila melanogaster...	[more]
Q8R5K5	4.8e-16	29.80	Probable U3 small nucleolar RNA-associated protein 11 OS=Rattus norvegicus OX=10...	[more]
Q9Y3A2	1.4e-15	29.39	Probable U3 small nucleolar RNA-associated protein 11 OS=Homo sapiens OX=9606 GN...	[more]

BLAST of CmoCh09G011640 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A6J1EWL8	3.8e-117	100.00	U3 small nucleolar RNA-associated protein 11 OS=Cucurbita moschata OX=3662 GN=LO...	[more]
A0A6J1IQ26	5.0e-109	94.27	U3 small nucleolar RNA-associated protein 11 OS=Cucurbita maxima OX=3661 GN=LOC1...	[more]
A0A6J1IKV8	1.4e-106	93.39	U3 small nucleolar RNA-associated protein 11 OS=Cucurbita maxima OX=3661 GN=LOC1...	[more]
A0A5A7V1R2	6.5e-85	76.42	U3 small nucleolar RNA-associated protein 11 OS=Cucumis melo var. makuwa OX=1194...	[more]
A0A1S3CEP1	6.5e-85	76.42	U3 small nucleolar RNA-associated protein 11 OS=Cucumis melo OX=3656 GN=LOC10350...	[more]

BLAST of CmoCh09G011640 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_022932535.1	7.9e-117	100.00	probable U3 small nucleolar RNA-associated protein 11 [Cucurbita moschata] >XP_0...	[more]
KAG6592237.1	1.6e-114	97.79	putative U3 small nucleolar RNA-associated protein 11, partial [Cucurbita argyro...	[more]
KAG7020976.1	2.0e-112	94.85	putative U3 small nucleolar RNA-associated protein 11 [Cucurbita argyrosperma su...	[more]
XP_022976937.1	1.0e-108	94.27	probable U3 small nucleolar RNA-associated protein 11 isoform X1 [Cucurbita maxi...	[more]
XP_023535289.1	1.9e-107	93.36	probable U3 small nucleolar RNA-associated protein 11 isoform X1 [Cucurbita pepo...	[more]

BLAST of CmoCh09G011640 vs. TAIR 10


Match Name	E-value	Identity	Description
AT3G60360.1	4.8e-56	51.09	embryo sac development arrest 14	[more]

InterPro

Analysis Name: InterPro Annotations of Cucurbita moschata (Rifu) v1
Date Performed: 2021-10-25


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	COILS	Coil	Coil	coord: 249..269
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 342..372
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 43..63
None	No IPR available	PANTHER	PTHR12838:SF1	U3 SMALL NUCLEOLAR RNA-ASSOCIATED PROTEIN 11	coord: 147..372
IPR007144	Small-subunit processome, Utp11	PFAM	PF03998	Utp11	coord: 157..372 e-value: 5.6E-46 score: 157.5
IPR007144	Small-subunit processome, Utp11	PANTHER	PTHR12838	U3 SMALL NUCLEOLAR RNA-ASSOCIATED PROTEIN 11	coord: 147..372

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
CmoCh09G011640.1	CmoCh09G011640.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0006364	rRNA processing
cellular_component	GO:0005730	nucleolus
cellular_component	GO:0032040	small-subunit processome