CmoCh09G011160 (gene) Cucurbita moschata (Rifu) v1

Overview


Name	CmoCh09G011160
Type	gene
Organism	Cucurbita moschata (Cucurbita moschata (Rifu) v1)
Description	extensin-3-like isoform X1
Location	Cmo_Chr09: 6320168 .. 6320704 (+)
RNA-Seq Expression	CmoCh09G011160
Synteny	CmoCh09G011160

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDSpolypeptide

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGAGTCCTCCGTCTATCATTGTTCATCTTGTTATCGCAGTTTTCGTGGTAGCTTTAAGCTTATCATCCACATCTGCTGAAGGCTACGACGAGTACTATTCTCCTCCACCACCTGTTTACTACTCTCCTTGTCCACCCGTCAAATACTCTTCTCCACCACCTGTCAAATACTCGCCTCCACCTCCTAAGAAAGACGACGAATACAAATCTCCTCCACCACCGTCGCCAAAGAAGTCTCCTCCACCAAAAAAGACACCCCCTCCACCAGAGGTAAAGAAGTCTCCTCCGCCACCACCTCCACGAAAGAAGCCACCCCCTCCACCAGCACCGAAGAAATCGCCTCCTCCACCGCCACCACGAAAGAAGTCCCCTCCACCGCCATCGCCAAAGAAGTCTCCTCCACCGCCACCGCCAAAGAAGTCTCCTCCACCACCGCCAAAGAAGTCGCCACCCCAACCAGAACCAAAGAAGTCTCCTCCACCACCGTCGCCCGTGTACAAGTCGCCTCCTCCCCCACCATCGCCTTACTACTACTAG

mRNA sequence

ATGAGTCCTCCGTCTATCATTGTTCATCTTGTTATCGCAGTTTTCGTGGTAGCTTTAAGCTTATCATCCACATCTGCTGAAGGCTACGACGAGTACTATTCTCCTCCACCACCTGTTTACTACTCTCCTTGTCCACCCGTCAAATACTCTTCTCCACCACCTGTCAAATACTCGCCTCCACCTCCTAAGAAAGACGACGAATACAAATCTCCTCCACCACCGTCGCCAAAGAAGTCTCCTCCACCAAAAAAGACACCCCCTCCACCAGAGGTAAAGAAGTCTCCTCCGCCACCACCTCCACGAAAGAAGCCACCCCCTCCACCAGCACCGAAGAAATCGCCTCCTCCACCGCCACCACGAAAGAAGTCCCCTCCACCGCCATCGCCAAAGAAGTCTCCTCCACCGCCACCGCCAAAGAAGTCTCCTCCACCACCGCCAAAGAAGTCGCCACCCCAACCAGAACCAAAGAAGTCTCCTCCACCACCGTCGCCCGTGTACAAGTCGCCTCCTCCCCCACCATCGCCTTACTACTACTAG

Coding sequence (CDS)

ATGAGTCCTCCGTCTATCATTGTTCATCTTGTTATCGCAGTTTTCGTGGTAGCTTTAAGCTTATCATCCACATCTGCTGAAGGCTACGACGAGTACTATTCTCCTCCACCACCTGTTTACTACTCTCCTTGTCCACCCGTCAAATACTCTTCTCCACCACCTGTCAAATACTCGCCTCCACCTCCTAAGAAAGACGACGAATACAAATCTCCTCCACCACCGTCGCCAAAGAAGTCTCCTCCACCAAAAAAGACACCCCCTCCACCAGAGGTAAAGAAGTCTCCTCCGCCACCACCTCCACGAAAGAAGCCACCCCCTCCACCAGCACCGAAGAAATCGCCTCCTCCACCGCCACCACGAAAGAAGTCCCCTCCACCGCCATCGCCAAAGAAGTCTCCTCCACCGCCACCGCCAAAGAAGTCTCCTCCACCACCGCCAAAGAAGTCGCCACCCCAACCAGAACCAAAGAAGTCTCCTCCACCACCGTCGCCCGTGTACAAGTCGCCTCCTCCCCCACCATCGCCTTACTACTACTAG

Protein sequence

MSPPSIIVHLVIAVFVVALSLSSTSAEGYDEYYSPPPPVYYSPCPPVKYSSPPPVKYSPPPPKKDDEYKSPPPPSPKKSPPPKKTPPPPEVKKSPPPPPPRKKPPPPPAPKKSPPPPPPRKKSPPPPSPKKSPPPPPPKKSPPPPPKKSPPQPEPKKSPPPPSPVYKSPPPPPSPYYY

Homology

[Close]

BLAST of CmoCh09G011160 vs. ExPASy TrEMBL
Match: A0A6J1FDF6 (extensin-3-like isoform X1 OS=Cucurbita moschata OX=3662 GN=LOC111443007 PE=4 SV=1)

HSP 1 Score: 267.3 bits (682), Expect = 4.5e-68
Identity = 178/178 (100.00%), Postives = 178/178 (100.00%), Query Frame = 0


Query: 1   MSPPSIIVHLVIAVFVVALSLSSTSAEGYDEYYSPPPPVYYSPCPPVKYSSPPPVKYSPP 60
           MSPPSIIVHLVIAVFVVALSLSSTSAEGYDEYYSPPPPVYYSPCPPVKYSSPPPVKYSPP
Sbjct: 1   MSPPSIIVHLVIAVFVVALSLSSTSAEGYDEYYSPPPPVYYSPCPPVKYSSPPPVKYSPP 60

Query: 61  PPKKDDEYKSPPPPSPKKSPPPKKTPPPPEVKKSPPPPPPRKKPPPPPAPKKSPPPPPPR 120
           PPKKDDEYKSPPPPSPKKSPPPKKTPPPPEVKKSPPPPPPRKKPPPPPAPKKSPPPPPPR
Sbjct: 61  PPKKDDEYKSPPPPSPKKSPPPKKTPPPPEVKKSPPPPPPRKKPPPPPAPKKSPPPPPPR 120

Query: 121 KKSPPPPSPKKSPPPPPPKKSPPPPPKKSPPQPEPKKSPPPPSPVYKSPPPPPSPYYY 179
           KKSPPPPSPKKSPPPPPPKKSPPPPPKKSPPQPEPKKSPPPPSPVYKSPPPPPSPYYY
Sbjct: 121 KKSPPPPSPKKSPPPPPPKKSPPPPPKKSPPQPEPKKSPPPPSPVYKSPPPPPSPYYY 178

[Close]

BLAST of CmoCh09G011160 vs. ExPASy TrEMBL
Match: A0A6J1F841 (extensin-like isoform X2 OS=Cucurbita moschata OX=3662 GN=LOC111443008 PE=4 SV=1)

HSP 1 Score: 236.9 bits (603), Expect = 6.6e-59
Identity = 161/178 (90.45%), Postives = 161/178 (90.45%), Query Frame = 0


Query: 1   MSPPSIIVHLVIAVFVVALSLSSTSAEGYDEYYSPPPPVYYSPCPPVKYSSPPPVKYSPP 60
           MSPPSIIVHLVIAVFVVALSLSSTSAEGYDEYYSPPPPVYYSPCPPVKYSSPPPVKYSPP
Sbjct: 1   MSPPSIIVHLVIAVFVVALSLSSTSAEGYDEYYSPPPPVYYSPCPPVKYSSPPPVKYSPP 60

Query: 61  PPKKDDEYKSPPPPSPKKSPPPKKTPPPPEVKKSPPPPPPRKKPPPPPAPKKSPPPPPPR 120
           PPKKDDEYKSPPPPSPKKSPPPKKTPPPPEVKKSPPPPPPRKKPPPPPAPKKSPPPPPPR
Sbjct: 61  PPKKDDEYKSPPPPSPKKSPPPKKTPPPPEVKKSPPPPPPRKKPPPPPAPKKSPPPPPPR 120

Query: 121 KKSPPPPSPKKSPPPPPPKKSPPPPPKKSPPQPEPKKSPPPPSPVYKSPPPPPSPYYY 179
           KKSPPPPSPKKSPPPPP                 PKKSPPPPSPVYKSPPPPPSPYYY
Sbjct: 121 KKSPPPPSPKKSPPPPP-----------------PKKSPPPPSPVYKSPPPPPSPYYY 161

[Close]

BLAST of CmoCh09G011160 vs. ExPASy TrEMBL
Match: A0A6J1FDF9 (extensin-1-like isoform X3 OS=Cucurbita moschata OX=3662 GN=LOC111443008 PE=4 SV=1)

HSP 1 Score: 224.6 bits (571), Expect = 3.4e-55
Identity = 152/178 (85.39%), Postives = 152/178 (85.39%), Query Frame = 0


Query: 1   MSPPSIIVHLVIAVFVVALSLSSTSAEGYDEYYSPPPPVYYSPCPPVKYSSPPPVKYSPP 60
           MSPPSIIVHLVIAVFVVALSLSSTSAEGYDEYYSPPPPVYYSPCPPVKYSSPPPVKYSPP
Sbjct: 1   MSPPSIIVHLVIAVFVVALSLSSTSAEGYDEYYSPPPPVYYSPCPPVKYSSPPPVKYSPP 60

Query: 61  PPKKDDEYKSPPPPSPKKSPPPKKTPPPPEVKKSPPPPPPRKKPPPPPAPKKSPPPPPPR 120
           PPKKDDEYKSPPPPSPKKSPPPKKTPPPPEVKKSPPPPPPRKKPPPPPAPKKSPPPPPPR
Sbjct: 61  PPKKDDEYKSPPPPSPKKSPPPKKTPPPPEVKKSPPPPPPRKKPPPPPAPKKSPPPPPPR 120

Query: 121 KKSPPPPSPKKSPPPPPPKKSPPPPPKKSPPQPEPKKSPPPPSPVYKSPPPPPSPYYY 179
           KKSPPPPS                          PKKSPPPPSPVYKSPPPPPSPYYY
Sbjct: 121 KKSPPPPS--------------------------PKKSPPPPSPVYKSPPPPPSPYYY 152

[Close]

BLAST of CmoCh09G011160 vs. ExPASy TrEMBL
Match: A0A6J1IK20 (extensin-3-like OS=Cucurbita maxima OX=3661 GN=LOC111476989 PE=4 SV=1)

HSP 1 Score: 172.2 bits (435), Expect = 2.0e-39
Identity = 138/179 (77.09%), Postives = 141/179 (78.77%), Query Frame = 0


Query: 1   MSPPSIIVHLVIAVFVVALSLSSTSAEGYDEYYSPPPPVYYSPCPPVKYSSPPPVKYSPP 60
           M PPSIIVHLVIAV VVALS SST+AEGYD+YYSPPPPV YS       S PPP  YSPP
Sbjct: 1   MGPPSIIVHLVIAVCVVALSSSSTTAEGYDDYYSPPPPVKYS-------SPPPPAYYSPP 60

Query: 61  PPKKDDEYKSPPPPSPKKSPPPKKTPPPPEVKKSPPPPPPRKKPPPPPAPKKSPPPPPPR 120
           PPKKDDEYKS               PPPPEVKKSPPPPPPRKKPPPPPAPKKSPPPPPPR
Sbjct: 61  PPKKDDEYKS---------------PPPPEVKKSPPPPPPRKKPPPPPAPKKSPPPPPPR 120

Query: 121 KKSPPPPSPKKSPPPPPP-KKSPPPPPKKSPPQPEPKKSPPPPSPVYKSPPPPPSPYYY 179
           KKSPPPP+PKKSPPPPPP KKSPPPPP        PKKSPPPPSPVYKSPPPPPSPYYY
Sbjct: 121 KKSPPPPAPKKSPPPPPPRKKSPPPPP--------PKKSPPPPSPVYKSPPPPPSPYYY 149

[Close]

BLAST of CmoCh09G011160 vs. ExPASy TrEMBL
Match: A0A6J1IP49 (extensin-3-like OS=Cucurbita maxima OX=3661 GN=LOC111476988 PE=4 SV=1)

HSP 1 Score: 133.7 bits (335), Expect = 7.8e-28
Identity = 127/167 (76.05%), Postives = 128/167 (76.65%), Query Frame = 0


Query: 32  YYSP--------PPPVYYSPCPPVKYSS-PPPVKYSPPPPKKDDEYKSPPPPSPKKSPPP 91
           YYSP        PPPVYYSP PPVKYSS PPP  YSPPPPKKDDEYKSPPPP  KKSPPP
Sbjct: 473 YYSPPPPVYKYLPPPVYYSPPPPVKYSSPPPPAYYSPPPPKKDDEYKSPPPPEVKKSPPP 532

Query: 92  ----KKTPPPPEVKKSPPPPPPRKKPPPPPAPKKSPPPPPPRKKSPPPPSPKKSPPPPP- 151
               KK PPPP  KKSPPPPPPRKK PPPPAPKKSPPPPPPRKKSPPPP+PKKSPPPPP 
Sbjct: 533 PPPRKKPPPPPAPKKSPPPPPPRKKSPPPPAPKKSPPPPPPRKKSPPPPAPKKSPPPPPP 592

Query: 152 ---------PKKSPPPPP--KKSPPQPEPKKSPPPPSPVYKSPPPPP 174
                    PKKSPPPPP  KKSPP P PKKSPPPP P  KSPPPPP
Sbjct: 593 RKKSPPPPAPKKSPPPPPPRKKSPPPPAPKKSPPPPPPRKKSPPPPP 639

[Close]

BLAST of CmoCh09G011160 vs. NCBI nr
Match: XP_022936365.1 (extensin-3-like isoform X1 [Cucurbita moschata] >XP_022936368.1 extensin-3-like isoform X1 [Cucurbita moschata] >XP_022936371.1 extensin-3-like isoform X1 [Cucurbita moschata])

HSP 1 Score: 267.3 bits (682), Expect = 9.4e-68
Identity = 178/178 (100.00%), Postives = 178/178 (100.00%), Query Frame = 0


Query: 1   MSPPSIIVHLVIAVFVVALSLSSTSAEGYDEYYSPPPPVYYSPCPPVKYSSPPPVKYSPP 60
           MSPPSIIVHLVIAVFVVALSLSSTSAEGYDEYYSPPPPVYYSPCPPVKYSSPPPVKYSPP
Sbjct: 1   MSPPSIIVHLVIAVFVVALSLSSTSAEGYDEYYSPPPPVYYSPCPPVKYSSPPPVKYSPP 60

Query: 61  PPKKDDEYKSPPPPSPKKSPPPKKTPPPPEVKKSPPPPPPRKKPPPPPAPKKSPPPPPPR 120
           PPKKDDEYKSPPPPSPKKSPPPKKTPPPPEVKKSPPPPPPRKKPPPPPAPKKSPPPPPPR
Sbjct: 61  PPKKDDEYKSPPPPSPKKSPPPKKTPPPPEVKKSPPPPPPRKKPPPPPAPKKSPPPPPPR 120

Query: 121 KKSPPPPSPKKSPPPPPPKKSPPPPPKKSPPQPEPKKSPPPPSPVYKSPPPPPSPYYY 179
           KKSPPPPSPKKSPPPPPPKKSPPPPPKKSPPQPEPKKSPPPPSPVYKSPPPPPSPYYY
Sbjct: 121 KKSPPPPSPKKSPPPPPPKKSPPPPPKKSPPQPEPKKSPPPPSPVYKSPPPPPSPYYY 178

[Close]

BLAST of CmoCh09G011160 vs. NCBI nr
Match: XP_022936366.1 (extensin-like isoform X2 [Cucurbita moschata] >XP_022936369.1 extensin-like isoform X2 [Cucurbita moschata] >XP_022936372.1 extensin-like isoform X2 [Cucurbita moschata])

HSP 1 Score: 236.9 bits (603), Expect = 1.4e-58
Identity = 161/178 (90.45%), Postives = 161/178 (90.45%), Query Frame = 0


Query: 1   MSPPSIIVHLVIAVFVVALSLSSTSAEGYDEYYSPPPPVYYSPCPPVKYSSPPPVKYSPP 60
           MSPPSIIVHLVIAVFVVALSLSSTSAEGYDEYYSPPPPVYYSPCPPVKYSSPPPVKYSPP
Sbjct: 1   MSPPSIIVHLVIAVFVVALSLSSTSAEGYDEYYSPPPPVYYSPCPPVKYSSPPPVKYSPP 60

Query: 61  PPKKDDEYKSPPPPSPKKSPPPKKTPPPPEVKKSPPPPPPRKKPPPPPAPKKSPPPPPPR 120
           PPKKDDEYKSPPPPSPKKSPPPKKTPPPPEVKKSPPPPPPRKKPPPPPAPKKSPPPPPPR
Sbjct: 61  PPKKDDEYKSPPPPSPKKSPPPKKTPPPPEVKKSPPPPPPRKKPPPPPAPKKSPPPPPPR 120

Query: 121 KKSPPPPSPKKSPPPPPPKKSPPPPPKKSPPQPEPKKSPPPPSPVYKSPPPPPSPYYY 179
           KKSPPPPSPKKSPPPPP                 PKKSPPPPSPVYKSPPPPPSPYYY
Sbjct: 121 KKSPPPPSPKKSPPPPP-----------------PKKSPPPPSPVYKSPPPPPSPYYY 161

[Close]

BLAST of CmoCh09G011160 vs. NCBI nr
Match: XP_023535874.1 (extensin-3-like [Cucurbita pepo subsp. pepo])

HSP 1 Score: 231.9 bits (590), Expect = 4.4e-57
Identity = 164/177 (92.66%), Postives = 167/177 (94.35%), Query Frame = 0


Query: 1   MSPPSIIVHLVIAVFVVALSLSSTSAEGYDEYYSPPPPVYYSPCPPVKYSSPPPVKYSPP 60
           M PPSIIVHLVIAVFV ALSLS+TSAEGYD+YYSPPPPVYYSP PPVKYSSPP V YSPP
Sbjct: 1   MGPPSIIVHLVIAVFVAALSLSTTSAEGYDDYYSPPPPVYYSPPPPVKYSSPPRVYYSPP 60

Query: 61  PPKKDDEYKSPPPPSPKKSPPPKKTPPPPEVKKSPPPPPPRKKPPPPPAPKKSPPPPPPR 120
           PPKKDDE KSPPPPSPKKSPPPKKTPPPPEVKKSPPPPPPRKK PPPPAPKKSPPPPPPR
Sbjct: 61  PPKKDDEDKSPPPPSPKKSPPPKKTPPPPEVKKSPPPPPPRKKSPPPPAPKKSPPPPPPR 120

Query: 121 KKSPPPPSPKKSPPPPPPKKSPPPPPKKSPPQPEPKKSPPPPSPVYKSPPPPPSPYY 178
           KKSPPPPSPKKSPPPPPPKKSPPPPPKKSPP+ EPKKSPPPPSP YK PPPPPSPYY
Sbjct: 121 KKSPPPPSPKKSPPPPPPKKSPPPPPKKSPPRSEPKKSPPPPSPEYKWPPPPPSPYY 177

[Close]

BLAST of CmoCh09G011160 vs. NCBI nr
Match: KAG6592192.1 (hypothetical protein SDJN03_14538, partial [Cucurbita argyrosperma subsp. sororia])

HSP 1 Score: 227.6 bits (579), Expect = 8.2e-56
Identity = 162/177 (91.53%), Postives = 162/177 (91.53%), Query Frame = 0


Query: 1   MSPPSIIVHLVIAVFVVALSLSSTSAEGYDEYYSPPPPVYYSPCPPVKYSSPPPVKYSPP 60
           MSPPSIIVHLVIAVFVVALSLSSTSAEGYDEYYSPPPPVYYSP PPVKYSSPPPVKYSPP
Sbjct: 1   MSPPSIIVHLVIAVFVVALSLSSTSAEGYDEYYSPPPPVYYSPRPPVKYSSPPPVKYSPP 60

Query: 61  PPKKDDEYKSPPPPSPKKSPPPKKTPPPPEVKKSPPPPPPRKKPPPPPAPKKSPPPPPPR 120
           PPKKDDEYKSPPPPSPKKSPPPKKTPPPPEVKKSPPPPPPRKK PPP  PKKSPPPPPPR
Sbjct: 61  PPKKDDEYKSPPPPSPKKSPPPKKTPPPPEVKKSPPPPPPRKKSPPP--PKKSPPPPPPR 120

Query: 121 KKSPPPPSPKKSPPPPPPKKSPPPPPKKSPPQPEPKKSPPPPSPVYKSPPPPPSPYY 178
                    KKSPPPPPPKKSPPPPPKKSPPQPEPKKSPPPPSP YK PPPPPSPYY
Sbjct: 121 ---------KKSPPPPPPKKSPPPPPKKSPPQPEPKKSPPPPSPEYKWPPPPPSPYY 166

[Close]

BLAST of CmoCh09G011160 vs. NCBI nr
Match: XP_022936367.1 (extensin-1-like isoform X3 [Cucurbita moschata] >XP_022936370.1 extensin-1-like isoform X3 [Cucurbita moschata] >XP_022936373.1 extensin-1-like isoform X3 [Cucurbita moschata])

HSP 1 Score: 224.6 bits (571), Expect = 7.0e-55
Identity = 152/178 (85.39%), Postives = 152/178 (85.39%), Query Frame = 0


Query: 1   MSPPSIIVHLVIAVFVVALSLSSTSAEGYDEYYSPPPPVYYSPCPPVKYSSPPPVKYSPP 60
           MSPPSIIVHLVIAVFVVALSLSSTSAEGYDEYYSPPPPVYYSPCPPVKYSSPPPVKYSPP
Sbjct: 1   MSPPSIIVHLVIAVFVVALSLSSTSAEGYDEYYSPPPPVYYSPCPPVKYSSPPPVKYSPP 60

Query: 61  PPKKDDEYKSPPPPSPKKSPPPKKTPPPPEVKKSPPPPPPRKKPPPPPAPKKSPPPPPPR 120
           PPKKDDEYKSPPPPSPKKSPPPKKTPPPPEVKKSPPPPPPRKKPPPPPAPKKSPPPPPPR
Sbjct: 61  PPKKDDEYKSPPPPSPKKSPPPKKTPPPPEVKKSPPPPPPRKKPPPPPAPKKSPPPPPPR 120

Query: 121 KKSPPPPSPKKSPPPPPPKKSPPPPPKKSPPQPEPKKSPPPPSPVYKSPPPPPSPYYY 179
           KKSPPPPS                          PKKSPPPPSPVYKSPPPPPSPYYY
Sbjct: 121 KKSPPPPS--------------------------PKKSPPPPSPVYKSPPPPPSPYYY 152

[Close]

BLAST of CmoCh09G011160 vs. TAIR 10
Match: AT1G44191.1 (ECA1 gametogenesis related family protein )

HSP 1 Score: 45.4 bits (106), Expect = 5.4e-05
Identity = 94/155 (60.65%), Postives = 100/155 (64.52%), Query Frame = 0


Query: 34  SPPPPVYYSPCPPVKYSSPPPV-KYSPPPPKKDDEYKSPPPPSPKKS-PPPKKTPPPPEV 93
           SPPP       PP K SSPPP+ K SPPPPK      S PPP+PKKS PPPK + PPP  
Sbjct: 107 SPPPRTPKKSPPPPKPSSPPPIPKKSPPPPK-----PSSPPPTPKKSPPPPKPSSPPPSP 166

Query: 94  KKSPPPPPPRKKPP----PPPAPKKSPPPPPPRKKSPPPPSPKKSPPPP-----PPKKS- 153
           KKSPPPP P   PP    PPP PKKSPP PP  K S PPPSPKKSPPPP     PPK S 
Sbjct: 167 KKSPPPPKPSPSPPKPSTPPPTPKKSPPSPP--KPSSPPPSPKKSPPPPKPSPSPPKPST 226

Query: 154 PPPPPKKSPPQPEPKKSPPPPSPVYKSP-PPPPSP 176
           PPP PKKSPP P+P + PP PSP  + P PP P P
Sbjct: 227 PPPTPKKSPPPPKPSQPPPKPSPPRRKPSPPTPKP 254

The following BLAST results are available for this feature:

BLAST of CmoCh09G011160 vs.


Match Name	E-value	Identity	Description

BLAST of CmoCh09G011160 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A6J1FDF6	4.5e-68	100.00	extensin-3-like isoform X1 OS=Cucurbita moschata OX=3662 GN=LOC111443007 PE=4 SV...	[more]
A0A6J1F841	6.6e-59	90.45	extensin-like isoform X2 OS=Cucurbita moschata OX=3662 GN=LOC111443008 PE=4 SV=1	[more]
A0A6J1FDF9	3.4e-55	85.39	extensin-1-like isoform X3 OS=Cucurbita moschata OX=3662 GN=LOC111443008 PE=4 SV...	[more]
A0A6J1IK20	2.0e-39	77.09	extensin-3-like OS=Cucurbita maxima OX=3661 GN=LOC111476989 PE=4 SV=1	[more]
A0A6J1IP49	7.8e-28	76.05	extensin-3-like OS=Cucurbita maxima OX=3661 GN=LOC111476988 PE=4 SV=1	[more]

BLAST of CmoCh09G011160 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_022936365.1	9.4e-68	100.00	extensin-3-like isoform X1 [Cucurbita moschata] >XP_022936368.1 extensin-3-like ...	[more]
XP_022936366.1	1.4e-58	90.45	extensin-like isoform X2 [Cucurbita moschata] >XP_022936369.1 extensin-like isof...	[more]
XP_023535874.1	4.4e-57	92.66	extensin-3-like [Cucurbita pepo subsp. pepo]	[more]
KAG6592192.1	8.2e-56	91.53	hypothetical protein SDJN03_14538, partial [Cucurbita argyrosperma subsp. sorori...	[more]
XP_022936367.1	7.0e-55	85.39	extensin-1-like isoform X3 [Cucurbita moschata] >XP_022936370.1 extensin-1-like ...	[more]

BLAST of CmoCh09G011160 vs. TAIR 10


Match Name	E-value	Identity	Description
AT1G44191.1	5.4e-05	60.65	ECA1 gametogenesis related family protein	[more]

InterPro

Analysis Name: InterPro Annotations of Cucurbita moschata (Rifu) v1
Date Performed: 2021-10-25


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 51..178
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 73..178

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
CmoCh09G011160.1	CmoCh09G011160.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0006334	nucleosome assembly
cellular_component	GO:0000786	nucleosome
molecular_function	GO:0003677	DNA binding