CmoCh09G010950 (gene) Cucurbita moschata (Rifu) v1

Overview


Name	CmoCh09G010950
Type	gene
Organism	Cucurbita moschata (Cucurbita moschata (Rifu) v1)
Description	PsbP domain-containing protein
Location	Cmo_Chr09: 6065856 .. 6069703 (+)
RNA-Seq Expression	CmoCh09G010950
Synteny	CmoCh09G010950

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonfive_prime_UTRCDSpolypeptidethree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

CAGATGCAATTCCGCACCACATCCACACAAAAATCAAAGAACTAAATCCCTCTCGTCTTTGATCTCCCAATTTCCAGGCACTTACATCTCCATCCCTTAATCATTCTGATTCCTCCATTTCTGCAATTCGTCTCCAGAAATCATCGTTTCTGGGTTCGAATGGGATCGACTATGTTCGCCTCTGTTCCATTCTCCTGCAACTTTCACCAATCAAAGCCTCCTTCCCACATTCTCCAAAAGGGGGTTCCGGCCGTCGGTGGCGAAAAGGACAATCGGTCTCCCATTTTGAATCGGAGATCGGTTTTACTATCCGGTGTTTCTTTGGTTTCTTCTGCGGGTTTGGGGCTGCAGAGCGAGTGTTTGGCTGCGGTTAAGCAAGGTCTTCTTGCTGGGAGGATTCCTGGGTTGTCTGAACCAGATGAACAGGGTTGGCTTTTCTTAACCACTTGAATTCTGTATCTAAGTAATCCTTACTGTTGTTTTGTTTCTTGTTTACATCTATGATTTGTTTCTTTGTTTCAATTGGTGGAATCTTCTGGTTGCTGCAGATTGTGGATTGTGAAATACCTTTGTTCATGCTATGTATATGAATTTTAATATCTAACCTTATTTTAGTTCATGTAGTTTAAAATTTGTAATGGTTCATGTAGAATTTTTTGCATGTGTTGATGGATTAATCTGTAGGGAACAAATATGTTTTTAAACTAGAGAATAGATATTGAAAATGATGCATAATTTTCTATATTGTTTTTGGTGATGTAGTTAGTTAATTCCATCTTGTTAGTTTTTGGAGTTTCTATTGTTTTTGTGAGATCCCACATTGATTAGAGAAGGGAACGACATTGATGGGAGAGGGGAATGAGTGCCAGTGAGGACCTTGGACCCCTAAGAGGAGTGGATTGTGAGATCCCACATCGGTTGGGGAGGAGAACGAAGCATTCTTTATAAGGGTGTGGAAACCTCTCCCTAGCATACACATTTTGACAACCTTGAGGTGAAGTTCGAAAGGGGAAAGCCGAAAGAGGACAATATTTGCTAGCGGTGGGCTTGAGCTGTTACAAAATGGTATCAGAGCCAGACACTGCAGGGAGTGGATTGTGAGATCCTACATCGGTTGGGGAGGAGAACGAAACATTCTTTATAAGGGTGTGGAAACCTCTCTCTAGCATACACGTTTTGAAAACTTTGAGGGGAATTACGAAAGGGGAAAGCCTAAAGAGGACAATATCTACTAGCGATAGGCTTGAACTGTTATAAAATGGTATAAGAGCCAGACACCGGGTGGTGTGTCAGCGAGGACGTTGGGCCTCAAAGGAGGGTGGATTGTGAGATCCCACATCGATTAGAGAAGGGAACAATTGGAGAGGGAAATGAGTGCCAGTGATGACGCTAACCCCAAAGGGGGGTGGATTGTGAGATCTGCTGCCATCGGTGGGCTTGGGTTGCTAGCGGTGATCTCACCGCATTAAAAGAAGCAAACAGCGCTGATCATGCCATGTTTTCTATATCAAGTTTACATAGCATCTGGTGTGCTTGTGCAGGAATCTCTTGTATTAATCAGAATATATGCAGCAAATTTCATTCTTGACCATTGAAAGCTTTTAAACTCAAGCTTAGCATATCTGGTTTCTTGTTTGTTGCCTGCTCAGACAGGTTGGAGGACATATCGTAGACCCGACGAGAAGTCCGGTGGGCATGGAGTTGGATGGAGTCCTATTATTCCTTATGCCTTTTCAGTTCCACAAGACTGGGAAGAGGTAACTGCTGTTAGATGTTTTTTTCCCTTTTAACCTTATTAAAGATGCTGTTAAGAAGTACAAAAGGAACAAATGGCTTCTACTTCAATCAGTTTCTTCATTAGATCAGAGAAACTAACGAAACTTGATCAACCACTTTAGCTAACAAGATATTGACATGGGTTGTTAGTTCCTTCATGAGTTTGTGGACAGTTAAATGTTTCTGGGTTAGTGGCTCTGAGATTCCACGTCGGTTGGAAAGAGGAACGAAGCATTCCTTATAAGGGAATGGAAACTTCTCCTTAGTAAACGTGTTTCAAAACTGTGAGACTGACGGCGATACGTAACATGCTGAAGTGGACAATATCTACTAGCAGTGGCCTTGGGCTTGGACTATTACAAATGGTATCAGAGTTAGAAACTGAGCAGTGTGCCAGCGAGGATACTAAGCTTCCAAAGGGAGTGGATTGTGAGATCTCACATCGGTTGGAGAGGGGAACGAAGCATTCCTTATAAGGGTGTGGAAACCTCTCTAGTAGACGTGTTTTAGAACCGTGAGACTGACGGCGATACGTAACGGGTTGAAGTGGATAATATCTACTAGCGGTGGGCTTGGACTATTACAAATGGTATCAAAGGCAGACACCAGGCAGTGTGCCAGCGAGGATGCTGGGTTCCCAAAAGGGGTGAATTGTGAGATCCCACATCGGTTGGAGAGATGAACGAAGCATTCTTTATAAGGGTGTGGAAACCTCTCTCTAGTAAATGCATTTTAAAATCGTGAGGCTGACGGCGATACGTAACGGGCTGAAGCGGACAATATCTACTAACGGTGGGCTTGGACTGTTACAAATGGTATCAAAGCTAGACACCAAACAGTGTGCCAACGAGGACTCTGGGCTCCCAAAGGAGGTGGTGAATTGTGAGATCCCATATCGGTTGGAGAGGGGAACGAAGCATTCCTTATAAGGTTGTAGAAACCTCTCTCTAGTAGACCCGTTTTAAAACCATGAGACTGACGGCAATACGTAACGGGCTAAAGGGAACAATATCTATTAGCGATGGGTTTGGATGGTTCCCGTGGTCTTTTGGTATTTGCATTGGGGTGCATCAGGTTTCCTGTTGATTAGAGGAGTAAGCACAATGTATCATGTCTGCCAGCATCCAATGATATCTATTCCCAATTTATTTCTTTTCTAGGAATTGAAAAGTCTCGTCCTAGTTAGCTATGTCAAAGCAGACATGACACAATGTGCTTTTGAGTTGCAGGTTCCTGTGTCAATTGCCGATCTTGGAGGGACAGAGATTGATCTCAGATTCAAAAGCTCGAAGGAAGGTCGTCTGTTCGTCATCGTTGCGCCCGTTCAACGATTTTCCGATGGTGCATTTCCCCGAAACTTTATACTTGTTCAACTTTCCATTTTAAAGAAACTATACTGCTAAATGATGCATTCATTGTCATAATCCTGTGAAGTTATCGGTGACGATGCAACGATTGAAATGGTTGGCCCTCCAGAGAAAGTAATCAGCGCGTTCGGACCAGAAGTGATCGGAGAAAACGTAGAAGGGAAGGTGATGAACATGAGCGTGGCAGAGCATAATGGAAGAACATATTATCAGTTTGAATTGGAGCCTCCTCATGTTTTGATCACAGCAACAGCGGCAGGAAACCGTCTGTATCTATTCAGTGTAACAGGAAATGGTAAGACACTACCAAGAACGCTGGAGATATGATATGATATGATATGATATCAATTGTTTTCCATTAGAACTGAAGGAAGCTTGTTTTTGTTTCTCTGGGTGTTCTTATAGGGCTTCAATGGAAGAGACATTTCAGCGACCTGAAGCGGATAGCGGATTCCTTTCGTGTCGTGTGATGAACTTGTTTCGGAGCTAGTTGGAGTATATACATATGCAGTGTGAGTTACAGAACAACGGTTGATCAAGCTTTTTTCTCTAGTTGAATGGGTGACTCGAGAAACTCGAATGGAGTTCACAACCCAACTCAACCCTCTACTTCCGAGCTGGGTTAGGTTGTGTTGTTGGGTTATTTTTTTAAAATTATTTTTAAAAAATTACTTGCATCACTAAGTTACCGTTGTTTAAAAAAAA

mRNA sequence

CAGATGCAATTCCGCACCACATCCACACAAAAATCAAAGAACTAAATCCCTCTCGTCTTTGATCTCCCAATTTCCAGGCACTTACATCTCCATCCCTTAATCATTCTGATTCCTCCATTTCTGCAATTCGTCTCCAGAAATCATCGTTTCTGGGTTCGAATGGGATCGACTATGTTCGCCTCTGTTCCATTCTCCTGCAACTTTCACCAATCAAAGCCTCCTTCCCACATTCTCCAAAAGGGGGTTCCGGCCGTCGGTGGCGAAAAGGACAATCGGTCTCCCATTTTGAATCGGAGATCGGTTTTACTATCCGGTGTTTCTTTGGTTTCTTCTGCGGGTTTGGGGCTGCAGAGCGAGTGTTTGGCTGCGGTTAAGCAAGGTCTTCTTGCTGGGAGGATTCCTGGGTTGTCTGAACCAGATGAACAGGGTTGGAGGACATATCGTAGACCCGACGAGAAGTCCGGTGGGCATGGAGTTGGATGGAGTCCTATTATTCCTTATGCCTTTTCAGTTCCACAAGACTGGGAAGAGGTTCCTGTGTCAATTGCCGATCTTGGAGGGACAGAGATTGATCTCAGATTCAAAAGCTCGAAGGAAGGTCGTCTGTTCGTCATCGTTGCGCCCGTTCAACGATTTTCCGATGTTATCGGTGACGATGCAACGATTGAAATGGTTGGCCCTCCAGAGAAAGTAATCAGCGCGTTCGGACCAGAAGTGATCGGAGAAAACGTAGAAGGGAAGGTGATGAACATGAGCGTGGCAGAGCATAATGGAAGAACATATTATCAGTTTGAATTGGAGCCTCCTCATGTTTTGATCACAGCAACAGCGGCAGGAAACCGTCTGTATCTATTCAGTGTAACAGGAAATGGGCTTCAATGGAAGAGACATTTCAGCGACCTGAAGCGGATAGCGGATTCCTTTCGTGTCGTGTGATGAACTTGTTTCGGAGCTAGTTGGAGTATATACATATGCAGTGTGAGTTACAGAACAACGGTTGATCAAGCTTTTTTCTCTAGTTGAATGGGTGACTCGAGAAACTCGAATGGAGTTCACAACCCAACTCAACCCTCTACTTCCGAGCTGGGTTAGGTTGTGTTGTTGGGTTATTTTTTTAAAATTATTTTTAAAAAATTACTTGCATCACTAAGTTACCGTTGTTTAAAAAAAA

Coding sequence (CDS)

ATGGGATCGACTATGTTCGCCTCTGTTCCATTCTCCTGCAACTTTCACCAATCAAAGCCTCCTTCCCACATTCTCCAAAAGGGGGTTCCGGCCGTCGGTGGCGAAAAGGACAATCGGTCTCCCATTTTGAATCGGAGATCGGTTTTACTATCCGGTGTTTCTTTGGTTTCTTCTGCGGGTTTGGGGCTGCAGAGCGAGTGTTTGGCTGCGGTTAAGCAAGGTCTTCTTGCTGGGAGGATTCCTGGGTTGTCTGAACCAGATGAACAGGGTTGGAGGACATATCGTAGACCCGACGAGAAGTCCGGTGGGCATGGAGTTGGATGGAGTCCTATTATTCCTTATGCCTTTTCAGTTCCACAAGACTGGGAAGAGGTTCCTGTGTCAATTGCCGATCTTGGAGGGACAGAGATTGATCTCAGATTCAAAAGCTCGAAGGAAGGTCGTCTGTTCGTCATCGTTGCGCCCGTTCAACGATTTTCCGATGTTATCGGTGACGATGCAACGATTGAAATGGTTGGCCCTCCAGAGAAAGTAATCAGCGCGTTCGGACCAGAAGTGATCGGAGAAAACGTAGAAGGGAAGGTGATGAACATGAGCGTGGCAGAGCATAATGGAAGAACATATTATCAGTTTGAATTGGAGCCTCCTCATGTTTTGATCACAGCAACAGCGGCAGGAAACCGTCTGTATCTATTCAGTGTAACAGGAAATGGGCTTCAATGGAAGAGACATTTCAGCGACCTGAAGCGGATAGCGGATTCCTTTCGTGTCGTGTGA

Protein sequence

MGSTMFASVPFSCNFHQSKPPSHILQKGVPAVGGEKDNRSPILNRRSVLLSGVSLVSSAGLGLQSECLAAVKQGLLAGRIPGLSEPDEQGWRTYRRPDEKSGGHGVGWSPIIPYAFSVPQDWEEVPVSIADLGGTEIDLRFKSSKEGRLFVIVAPVQRFSDVIGDDATIEMVGPPEKVISAFGPEVIGENVEGKVMNMSVAEHNGRTYYQFELEPPHVLITATAAGNRLYLFSVTGNGLQWKRHFSDLKRIADSFRVV

Homology

[Close]

BLAST of CmoCh09G010950 vs. ExPASy Swiss-Prot
Match: O49292 (PsbP domain-containing protein 4, chloroplastic OS=Arabidopsis thaliana OX=3702 GN=PPD4 PE=1 SV=2)

HSP 1 Score: 358.2 bits (918), Expect = 7.7e-98
Identity = 175/226 (77.43%), Postives = 195/226 (86.28%), Query Frame = 0


Query: 33  GGEKDNRSPILNRRSVLLSGVSLVSSAGLGLQSECLAAVKQGLLAGRIPGLSEPDEQGWR 92
           G E +  + +L+RRSV+ SG+ + S+  L    E LA VKQGLLAGR+PGLSEPDE+GWR
Sbjct: 36  GCEDEWCARVLSRRSVMASGL-VSSTTALAFPREGLAVVKQGLLAGRVPGLSEPDEEGWR 95

Query: 93  TYRRPDEKSGGHGVGWSPIIPYAFSVPQDWEEVPVSIADLGGTEIDLRFKSSKEGRLFVI 152
           TYRRPDEKSGGHGVGWSPIIPYAFSVPQDW EVPVSIADLGGTEIDLRF S KEGRL VI
Sbjct: 96  TYRRPDEKSGGHGVGWSPIIPYAFSVPQDWNEVPVSIADLGGTEIDLRFASPKEGRLSVI 155

Query: 153 VAPVQRFSDVIGDDATIEMVGPPEKVISAFGPEVIGENVEGKVMNMSVAEHNGRTYYQFE 212
           VAPV RF+D +GDD  IE +G P KVI+AFGPEVIGENVEGKV++ +VAEH+GR YYQFE
Sbjct: 156 VAPVLRFADNLGDDVKIENIGQPAKVINAFGPEVIGENVEGKVLSSNVAEHDGRLYYQFE 215

Query: 213 LEPPHVLITATAAGNRLYLFSVTGNGLQWKRHFSDLKRIADSFRVV 259
           LEPPHVLITATAAGNRLYLFSVTGNGLQWKRH+ DLKRIA SFR+V
Sbjct: 216 LEPPHVLITATAAGNRLYLFSVTGNGLQWKRHYKDLKRIASSFRIV 260

[Close]

BLAST of CmoCh09G010950 vs. ExPASy Swiss-Prot
Match: Q9LXX5 (PsbP domain-containing protein 6, chloroplastic OS=Arabidopsis thaliana OX=3702 GN=PPD6 PE=1 SV=1)

HSP 1 Score: 87.4 bits (215), Expect = 2.5e-16
Identity = 70/265 (26.42%), Postives = 130/265 (49.06%), Query Frame = 0


Query: 9   VPFSCNFHQS-KPPSHILQKGVPAVGGEKDNRSPILNRRSVLLSGVSLVSSAGLGLQSEC 68
           VP S  F  S K  + I  +    V   +  + P   RR  LL   ++   A L L+   
Sbjct: 7   VPTSKIFSVSPKSSASIKARSRVVVASSQQQQQP---RRRELLLKSAVAIPAILQLKEAP 66

Query: 69  LAAVKQGLLAGRIPGLSEPDEQGWRTYRRPDEKSGGHGVGWSPIIPYAFSVPQDWEEVPV 128
           ++A ++  +   +P    P +  +  ++     +     G   + PY F +P +W+++ +
Sbjct: 67  ISAAREVEVGSYLP--LSPSDPSFVLFKAKPSDTPALRAG--NVQPYQFVLPPNWKQLRI 126

Query: 129 SIADLGG--------TEIDLRFKSSKEGRLFVIVAPVQRFSDVIGDDATIEMVGPPEKVI 188
           +    G           I+++F++ K+G++ V+ +P+ R ++    +ATIE +G PEKVI
Sbjct: 127 ANILSGNYCQPKCAEPWIEVKFENEKQGKVQVVASPLIRLTN--KPNATIEDLGEPEKVI 186

Query: 189 SAFGPEVIGENVEG-KVMNMSVAEHNGRTYYQFELEPP------HVLITATAAGNRLYLF 248
           ++ GP V G + +  +++  S+ +   +TYY++ LE P      H L  ATA G+ + LF
Sbjct: 187 ASLGPFVTGNSYDSDELLKTSIEKIGDQTYYKYVLETPFALTGSHNLAKATAKGSTVVLF 246

Query: 249 SVTGNGLQWKRHFSDLKRIADSFRV 258
            V+    QW+     L+ I DSF++
Sbjct: 247 VVSATEKQWQSSQKTLEAILDSFQL 262

[Close]

BLAST of CmoCh09G010950 vs. ExPASy TrEMBL
Match: A0A6J1FDH1 (psbP domain-containing protein 4, chloroplastic OS=Cucurbita moschata OX=3662 GN=LOC111443110 PE=4 SV=1)

HSP 1 Score: 526.2 bits (1354), Expect = 7.9e-146
Identity = 258/258 (100.00%), Postives = 258/258 (100.00%), Query Frame = 0


Query: 1   MGSTMFASVPFSCNFHQSKPPSHILQKGVPAVGGEKDNRSPILNRRSVLLSGVSLVSSAG 60
           MGSTMFASVPFSCNFHQSKPPSHILQKGVPAVGGEKDNRSPILNRRSVLLSGVSLVSSAG
Sbjct: 1   MGSTMFASVPFSCNFHQSKPPSHILQKGVPAVGGEKDNRSPILNRRSVLLSGVSLVSSAG 60

Query: 61  LGLQSECLAAVKQGLLAGRIPGLSEPDEQGWRTYRRPDEKSGGHGVGWSPIIPYAFSVPQ 120
           LGLQSECLAAVKQGLLAGRIPGLSEPDEQGWRTYRRPDEKSGGHGVGWSPIIPYAFSVPQ
Sbjct: 61  LGLQSECLAAVKQGLLAGRIPGLSEPDEQGWRTYRRPDEKSGGHGVGWSPIIPYAFSVPQ 120

Query: 121 DWEEVPVSIADLGGTEIDLRFKSSKEGRLFVIVAPVQRFSDVIGDDATIEMVGPPEKVIS 180
           DWEEVPVSIADLGGTEIDLRFKSSKEGRLFVIVAPVQRFSDVIGDDATIEMVGPPEKVIS
Sbjct: 121 DWEEVPVSIADLGGTEIDLRFKSSKEGRLFVIVAPVQRFSDVIGDDATIEMVGPPEKVIS 180

Query: 181 AFGPEVIGENVEGKVMNMSVAEHNGRTYYQFELEPPHVLITATAAGNRLYLFSVTGNGLQ 240
           AFGPEVIGENVEGKVMNMSVAEHNGRTYYQFELEPPHVLITATAAGNRLYLFSVTGNGLQ
Sbjct: 181 AFGPEVIGENVEGKVMNMSVAEHNGRTYYQFELEPPHVLITATAAGNRLYLFSVTGNGLQ 240

Query: 241 WKRHFSDLKRIADSFRVV 259
           WKRHFSDLKRIADSFRVV
Sbjct: 241 WKRHFSDLKRIADSFRVV 258

[Close]

BLAST of CmoCh09G010950 vs. ExPASy TrEMBL
Match: A0A6J1IFH3 (psbP domain-containing protein 4, chloroplastic OS=Cucurbita maxima OX=3661 GN=LOC111473925 PE=4 SV=1)

HSP 1 Score: 519.2 bits (1336), Expect = 9.6e-144
Identity = 254/258 (98.45%), Postives = 257/258 (99.61%), Query Frame = 0


Query: 1   MGSTMFASVPFSCNFHQSKPPSHILQKGVPAVGGEKDNRSPILNRRSVLLSGVSLVSSAG 60
           MGSTMFA+VPFSCNFHQSKPPS ILQKGVPAVGGEK+NRSPILNRRSVLLSGVSLVSSAG
Sbjct: 1   MGSTMFATVPFSCNFHQSKPPSQILQKGVPAVGGEKENRSPILNRRSVLLSGVSLVSSAG 60

Query: 61  LGLQSECLAAVKQGLLAGRIPGLSEPDEQGWRTYRRPDEKSGGHGVGWSPIIPYAFSVPQ 120
           LGLQSECLAAVKQGLLAGRIPGLSEPDEQGWRTYRRPDEKSGGHGVGWSPIIPYAFSVPQ
Sbjct: 61  LGLQSECLAAVKQGLLAGRIPGLSEPDEQGWRTYRRPDEKSGGHGVGWSPIIPYAFSVPQ 120

Query: 121 DWEEVPVSIADLGGTEIDLRFKSSKEGRLFVIVAPVQRFSDVIGDDATIEMVGPPEKVIS 180
           DWEEVPVSIADLGGTEIDLRFKSSKEGRLFVIVAPVQRFSDVIGDDATIEMVGPPEKVIS
Sbjct: 121 DWEEVPVSIADLGGTEIDLRFKSSKEGRLFVIVAPVQRFSDVIGDDATIEMVGPPEKVIS 180

Query: 181 AFGPEVIGENVEGKVMNMSVAEHNGRTYYQFELEPPHVLITATAAGNRLYLFSVTGNGLQ 240
           AFGPEVIGENVEGKVMNMSVAEHNGRTYYQFELEPPHVLITATAAGNRLYLFSVTGNGLQ
Sbjct: 181 AFGPEVIGENVEGKVMNMSVAEHNGRTYYQFELEPPHVLITATAAGNRLYLFSVTGNGLQ 240

Query: 241 WKRHFSDLKRIADSFRVV 259
           WKRH+SDLKRIADSFRVV
Sbjct: 241 WKRHYSDLKRIADSFRVV 258

[Close]

BLAST of CmoCh09G010950 vs. ExPASy TrEMBL
Match: A0A6J1DKA3 (psbP domain-containing protein 4, chloroplastic OS=Momordica charantia OX=3673 GN=LOC111021699 PE=4 SV=1)

HSP 1 Score: 433.7 bits (1114), Expect = 5.3e-118
Identity = 212/259 (81.85%), Postives = 229/259 (88.42%), Query Frame = 0


Query: 1   MGSTMFASVPFSCNFHQSKPPSHILQ-KGVPAVGGEKDNRSPILNRRSVLLSGVSLVSSA 60
           MG+++F S  FSCNFH  K PS IL  + +    GE       LNRRS+L SG+SL+S+A
Sbjct: 1   MGTSLFTSYRFSCNFHHPKLPSPILHPQSISVADGENQRPLGDLNRRSILASGISLLSTA 60

Query: 61  GLGLQSECLAAVKQGLLAGRIPGLSEPDEQGWRTYRRPDEKSGGHGVGWSPIIPYAFSVP 120
            LGL   CLAAVKQGLLAGRIPGLSEPDEQGWRTYRRPDEKSGGHGVGWSPIIPY FSVP
Sbjct: 61  PLGLHDHCLAAVKQGLLAGRIPGLSEPDEQGWRTYRRPDEKSGGHGVGWSPIIPYVFSVP 120

Query: 121 QDWEEVPVSIADLGGTEIDLRFKSSKEGRLFVIVAPVQRFSDVIGDDATIEMVGPPEKVI 180
           QDWEEVPVSIADLGGTEIDLRF SSKEGRLFVIVAPV+RFSDVIG+DATIEMVGPPEKVI
Sbjct: 121 QDWEEVPVSIADLGGTEIDLRFGSSKEGRLFVIVAPVRRFSDVIGEDATIEMVGPPEKVI 180

Query: 181 SAFGPEVIGENVEGKVMNMSVAEHNGRTYYQFELEPPHVLITATAAGNRLYLFSVTGNGL 240
           +AFGPEVIGENVEGKV+NM+VAEH+GRTYYQFELEPPHVLITATAAGNRLYLF+VT NGL
Sbjct: 181 NAFGPEVIGENVEGKVINMNVAEHSGRTYYQFELEPPHVLITATAAGNRLYLFNVTANGL 240

Query: 241 QWKRHFSDLKRIADSFRVV 259
           QWKRH+ DLKRIADSFRVV
Sbjct: 241 QWKRHYGDLKRIADSFRVV 259

[Close]

BLAST of CmoCh09G010950 vs. ExPASy TrEMBL
Match: A0A0A0K501 (PsbP domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_7G322590 PE=4 SV=1)

HSP 1 Score: 428.7 bits (1101), Expect = 1.7e-116
Identity = 214/268 (79.85%), Postives = 236/268 (88.06%), Query Frame = 0


Query: 1   MGSTMFASVPFSCNFHQS------KPPSHILQKGVPAVGGEKDNRSPI----LNRRSVLL 60
           MG+T+F + PFS  FH         PP H L K V AV G   N++PI    LNRR  L+
Sbjct: 1   MGTTLFITNPFSSIFHHQYLPSPHLPPHHFLPKRVSAVHG-AHNQNPISSTALNRRWALV 60

Query: 61  SGVSLVSSAGLGLQSECLAAVKQGLLAGRIPGLSEPDEQGWRTYRRPDEKSGGHGVGWSP 120
           SGVSL+SSA LGLQ++CLAAVKQGLLAGRIPGLSEPDEQGWRTYRRPDEKSGGHGVGWSP
Sbjct: 61  SGVSLLSSAALGLQNDCLAAVKQGLLAGRIPGLSEPDEQGWRTYRRPDEKSGGHGVGWSP 120

Query: 121 IIPYAFSVPQDWEEVPVSIADLGGTEIDLRFKSSKEGRLFVIVAPVQRFSDVIGDDATIE 180
           IIPYAFSVPQDWEEVPVSIADLGGTEIDLRF S KEGR+FV+VAPV+RFSDVIG+DATIE
Sbjct: 121 IIPYAFSVPQDWEEVPVSIADLGGTEIDLRFGSLKEGRVFVVVAPVRRFSDVIGEDATIE 180

Query: 181 MVGPPEKVISAFGPEVIGENVEGKVMNMSVAEHNGRTYYQFELEPPHVLITATAAGNRLY 240
           MVGPPEKVI+AFGPEVIGENVEGKV++MSVAEH+GRTYYQFELEPPHV+ITATAAGNRLY
Sbjct: 181 MVGPPEKVINAFGPEVIGENVEGKVISMSVAEHSGRTYYQFELEPPHVIITATAAGNRLY 240

Query: 241 LFSVTGNGLQWKRHFSDLKRIADSFRVV 259
           LF+VT NGLQWKRH++DLKRIADSFR+V
Sbjct: 241 LFNVTANGLQWKRHYNDLKRIADSFRIV 267

[Close]

BLAST of CmoCh09G010950 vs. ExPASy TrEMBL
Match: A0A5A7T2U1 (PsbP domain-containing protein 4 OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold1784G00200 PE=4 SV=1)

HSP 1 Score: 418.3 bits (1074), Expect = 2.3e-113
Identity = 214/268 (79.85%), Postives = 233/268 (86.94%), Query Frame = 0


Query: 1   MGST-MFASVPFSCNFHQSKPPSHILQ------KGVPAV---GGEKDNRSPILNRRSVLL 60
           MG+T +F + PFS  FHQ   PS +L       K V A+     +    SP L RR VL+
Sbjct: 1   MGTTALFITNPFSSIFHQQNLPSPLLHPHRFLPKRVSALHRAHNQNPISSPALIRRWVLV 60

Query: 61  SGVSLVSSAGLGLQSECLAAVKQGLLAGRIPGLSEPDEQGWRTYRRPDEKSGGHGVGWSP 120
           SGVSL+SSA LGLQ+ECLAAVKQGLLAGRIPGLSEPDEQGWRTYRRPDEKSGGHGVGWSP
Sbjct: 61  SGVSLLSSAALGLQNECLAAVKQGLLAGRIPGLSEPDEQGWRTYRRPDEKSGGHGVGWSP 120

Query: 121 IIPYAFSVPQDWEEVPVSIADLGGTEIDLRFKSSKEGRLFVIVAPVQRFSDVIGDDATIE 180
           IIPYAFSVPQDWEEVPVSIADLGGTEIDLRF S KEGRLFVIVAPV+RFSDVIG+DATIE
Sbjct: 121 IIPYAFSVPQDWEEVPVSIADLGGTEIDLRFGSLKEGRLFVIVAPVRRFSDVIGEDATIE 180

Query: 181 MVGPPEKVISAFGPEVIGENVEGKVMNMSVAEHNGRTYYQFELEPPHVLITATAAGNRLY 240
           MVGPPEKVI+AFGPEVIGENVEGKV++MSVAE++GRTYYQFELEPPHV+ITATAAGNRLY
Sbjct: 181 MVGPPEKVINAFGPEVIGENVEGKVISMSVAEYSGRTYYQFELEPPHVIITATAAGNRLY 240

Query: 241 LFSVTGNGLQWKRHFSDLKRIADSFRVV 259
           LF+VT NGLQWKRH+ DLKRIADSFRVV
Sbjct: 241 LFNVTANGLQWKRHYKDLKRIADSFRVV 268

[Close]

BLAST of CmoCh09G010950 vs. NCBI nr
Match: XP_022936523.1 (psbP domain-containing protein 4, chloroplastic [Cucurbita moschata] >KAG7025035.1 PsbP domain-containing protein 4, chloroplastic [Cucurbita argyrosperma subsp. argyrosperma])

HSP 1 Score: 526.2 bits (1354), Expect = 1.6e-145
Identity = 258/258 (100.00%), Postives = 258/258 (100.00%), Query Frame = 0


Query: 1   MGSTMFASVPFSCNFHQSKPPSHILQKGVPAVGGEKDNRSPILNRRSVLLSGVSLVSSAG 60
           MGSTMFASVPFSCNFHQSKPPSHILQKGVPAVGGEKDNRSPILNRRSVLLSGVSLVSSAG
Sbjct: 1   MGSTMFASVPFSCNFHQSKPPSHILQKGVPAVGGEKDNRSPILNRRSVLLSGVSLVSSAG 60

Query: 61  LGLQSECLAAVKQGLLAGRIPGLSEPDEQGWRTYRRPDEKSGGHGVGWSPIIPYAFSVPQ 120
           LGLQSECLAAVKQGLLAGRIPGLSEPDEQGWRTYRRPDEKSGGHGVGWSPIIPYAFSVPQ
Sbjct: 61  LGLQSECLAAVKQGLLAGRIPGLSEPDEQGWRTYRRPDEKSGGHGVGWSPIIPYAFSVPQ 120

Query: 121 DWEEVPVSIADLGGTEIDLRFKSSKEGRLFVIVAPVQRFSDVIGDDATIEMVGPPEKVIS 180
           DWEEVPVSIADLGGTEIDLRFKSSKEGRLFVIVAPVQRFSDVIGDDATIEMVGPPEKVIS
Sbjct: 121 DWEEVPVSIADLGGTEIDLRFKSSKEGRLFVIVAPVQRFSDVIGDDATIEMVGPPEKVIS 180

Query: 181 AFGPEVIGENVEGKVMNMSVAEHNGRTYYQFELEPPHVLITATAAGNRLYLFSVTGNGLQ 240
           AFGPEVIGENVEGKVMNMSVAEHNGRTYYQFELEPPHVLITATAAGNRLYLFSVTGNGLQ
Sbjct: 181 AFGPEVIGENVEGKVMNMSVAEHNGRTYYQFELEPPHVLITATAAGNRLYLFSVTGNGLQ 240

Query: 241 WKRHFSDLKRIADSFRVV 259
           WKRHFSDLKRIADSFRVV
Sbjct: 241 WKRHFSDLKRIADSFRVV 258

[Close]

BLAST of CmoCh09G010950 vs. NCBI nr
Match: KAG6592174.1 (PsbP domain-containing protein 4, chloroplastic, partial [Cucurbita argyrosperma subsp. sororia])

HSP 1 Score: 523.5 bits (1347), Expect = 1.1e-144
Identity = 256/258 (99.22%), Postives = 258/258 (100.00%), Query Frame = 0


Query: 1   MGSTMFASVPFSCNFHQSKPPSHILQKGVPAVGGEKDNRSPILNRRSVLLSGVSLVSSAG 60
           MGSTMFA+VPFSCNFHQSKPPSHILQKGVPAVGGEK+NRSPILNRRSVLLSGVSLVSSAG
Sbjct: 1   MGSTMFATVPFSCNFHQSKPPSHILQKGVPAVGGEKENRSPILNRRSVLLSGVSLVSSAG 60

Query: 61  LGLQSECLAAVKQGLLAGRIPGLSEPDEQGWRTYRRPDEKSGGHGVGWSPIIPYAFSVPQ 120
           LGLQSECLAAVKQGLLAGRIPGLSEPDEQGWRTYRRPDEKSGGHGVGWSPIIPYAFSVPQ
Sbjct: 61  LGLQSECLAAVKQGLLAGRIPGLSEPDEQGWRTYRRPDEKSGGHGVGWSPIIPYAFSVPQ 120

Query: 121 DWEEVPVSIADLGGTEIDLRFKSSKEGRLFVIVAPVQRFSDVIGDDATIEMVGPPEKVIS 180
           DWEEVPVSIADLGGTEIDLRFKSSKEGRLFVIVAPVQRFSDVIGDDATIEMVGPPEKVIS
Sbjct: 121 DWEEVPVSIADLGGTEIDLRFKSSKEGRLFVIVAPVQRFSDVIGDDATIEMVGPPEKVIS 180

Query: 181 AFGPEVIGENVEGKVMNMSVAEHNGRTYYQFELEPPHVLITATAAGNRLYLFSVTGNGLQ 240
           AFGPEVIGENVEGKVMNMSVAEHNGRTYYQFELEPPHVLITATAAGNRLYLFSVTGNGLQ
Sbjct: 181 AFGPEVIGENVEGKVMNMSVAEHNGRTYYQFELEPPHVLITATAAGNRLYLFSVTGNGLQ 240

Query: 241 WKRHFSDLKRIADSFRVV 259
           WKRHFSDLKRIADSFRVV
Sbjct: 241 WKRHFSDLKRIADSFRVV 258

[Close]

BLAST of CmoCh09G010950 vs. NCBI nr
Match: XP_023534875.1 (psbP domain-containing protein 4, chloroplastic [Cucurbita pepo subsp. pepo])

HSP 1 Score: 520.8 bits (1340), Expect = 6.8e-144
Identity = 254/258 (98.45%), Postives = 257/258 (99.61%), Query Frame = 0


Query: 1   MGSTMFASVPFSCNFHQSKPPSHILQKGVPAVGGEKDNRSPILNRRSVLLSGVSLVSSAG 60
           MGSTMFASVPFSCNFHQSKPPSHILQKGVP VGGEK+NRSPI+NRRSVLLSGVSLVSSAG
Sbjct: 1   MGSTMFASVPFSCNFHQSKPPSHILQKGVPGVGGEKENRSPIVNRRSVLLSGVSLVSSAG 60

Query: 61  LGLQSECLAAVKQGLLAGRIPGLSEPDEQGWRTYRRPDEKSGGHGVGWSPIIPYAFSVPQ 120
           LGLQSECLAAVKQGLLAGRIPGLSEPDEQGWRTYRRPDEKSGGHGVGWSPIIPYAFSVPQ
Sbjct: 61  LGLQSECLAAVKQGLLAGRIPGLSEPDEQGWRTYRRPDEKSGGHGVGWSPIIPYAFSVPQ 120

Query: 121 DWEEVPVSIADLGGTEIDLRFKSSKEGRLFVIVAPVQRFSDVIGDDATIEMVGPPEKVIS 180
           DWEEVPVSIADLGGTEIDLRFKSSKEGRLFVIVAPVQRFSDVIGDDATIEMVGPPEKVIS
Sbjct: 121 DWEEVPVSIADLGGTEIDLRFKSSKEGRLFVIVAPVQRFSDVIGDDATIEMVGPPEKVIS 180

Query: 181 AFGPEVIGENVEGKVMNMSVAEHNGRTYYQFELEPPHVLITATAAGNRLYLFSVTGNGLQ 240
           AFGPEVIGENVEGKVMNMSVAEHNGRTYYQFELEPPHVLITATAAGNRLYLFSVTGNGLQ
Sbjct: 181 AFGPEVIGENVEGKVMNMSVAEHNGRTYYQFELEPPHVLITATAAGNRLYLFSVTGNGLQ 240

Query: 241 WKRHFSDLKRIADSFRVV 259
           WKRH+SDLKRIADSFRVV
Sbjct: 241 WKRHYSDLKRIADSFRVV 258

[Close]

BLAST of CmoCh09G010950 vs. NCBI nr
Match: XP_022975015.1 (psbP domain-containing protein 4, chloroplastic [Cucurbita maxima])

HSP 1 Score: 519.2 bits (1336), Expect = 2.0e-143
Identity = 254/258 (98.45%), Postives = 257/258 (99.61%), Query Frame = 0


Query: 1   MGSTMFASVPFSCNFHQSKPPSHILQKGVPAVGGEKDNRSPILNRRSVLLSGVSLVSSAG 60
           MGSTMFA+VPFSCNFHQSKPPS ILQKGVPAVGGEK+NRSPILNRRSVLLSGVSLVSSAG
Sbjct: 1   MGSTMFATVPFSCNFHQSKPPSQILQKGVPAVGGEKENRSPILNRRSVLLSGVSLVSSAG 60

Query: 61  LGLQSECLAAVKQGLLAGRIPGLSEPDEQGWRTYRRPDEKSGGHGVGWSPIIPYAFSVPQ 120
           LGLQSECLAAVKQGLLAGRIPGLSEPDEQGWRTYRRPDEKSGGHGVGWSPIIPYAFSVPQ
Sbjct: 61  LGLQSECLAAVKQGLLAGRIPGLSEPDEQGWRTYRRPDEKSGGHGVGWSPIIPYAFSVPQ 120

Query: 121 DWEEVPVSIADLGGTEIDLRFKSSKEGRLFVIVAPVQRFSDVIGDDATIEMVGPPEKVIS 180
           DWEEVPVSIADLGGTEIDLRFKSSKEGRLFVIVAPVQRFSDVIGDDATIEMVGPPEKVIS
Sbjct: 121 DWEEVPVSIADLGGTEIDLRFKSSKEGRLFVIVAPVQRFSDVIGDDATIEMVGPPEKVIS 180

Query: 181 AFGPEVIGENVEGKVMNMSVAEHNGRTYYQFELEPPHVLITATAAGNRLYLFSVTGNGLQ 240
           AFGPEVIGENVEGKVMNMSVAEHNGRTYYQFELEPPHVLITATAAGNRLYLFSVTGNGLQ
Sbjct: 181 AFGPEVIGENVEGKVMNMSVAEHNGRTYYQFELEPPHVLITATAAGNRLYLFSVTGNGLQ 240

Query: 241 WKRHFSDLKRIADSFRVV 259
           WKRH+SDLKRIADSFRVV
Sbjct: 241 WKRHYSDLKRIADSFRVV 258

[Close]

BLAST of CmoCh09G010950 vs. NCBI nr
Match: XP_022154428.1 (psbP domain-containing protein 4, chloroplastic [Momordica charantia])

HSP 1 Score: 433.7 bits (1114), Expect = 1.1e-117
Identity = 212/259 (81.85%), Postives = 229/259 (88.42%), Query Frame = 0


Query: 1   MGSTMFASVPFSCNFHQSKPPSHILQ-KGVPAVGGEKDNRSPILNRRSVLLSGVSLVSSA 60
           MG+++F S  FSCNFH  K PS IL  + +    GE       LNRRS+L SG+SL+S+A
Sbjct: 1   MGTSLFTSYRFSCNFHHPKLPSPILHPQSISVADGENQRPLGDLNRRSILASGISLLSTA 60

Query: 61  GLGLQSECLAAVKQGLLAGRIPGLSEPDEQGWRTYRRPDEKSGGHGVGWSPIIPYAFSVP 120
            LGL   CLAAVKQGLLAGRIPGLSEPDEQGWRTYRRPDEKSGGHGVGWSPIIPY FSVP
Sbjct: 61  PLGLHDHCLAAVKQGLLAGRIPGLSEPDEQGWRTYRRPDEKSGGHGVGWSPIIPYVFSVP 120

Query: 121 QDWEEVPVSIADLGGTEIDLRFKSSKEGRLFVIVAPVQRFSDVIGDDATIEMVGPPEKVI 180
           QDWEEVPVSIADLGGTEIDLRF SSKEGRLFVIVAPV+RFSDVIG+DATIEMVGPPEKVI
Sbjct: 121 QDWEEVPVSIADLGGTEIDLRFGSSKEGRLFVIVAPVRRFSDVIGEDATIEMVGPPEKVI 180

Query: 181 SAFGPEVIGENVEGKVMNMSVAEHNGRTYYQFELEPPHVLITATAAGNRLYLFSVTGNGL 240
           +AFGPEVIGENVEGKV+NM+VAEH+GRTYYQFELEPPHVLITATAAGNRLYLF+VT NGL
Sbjct: 181 NAFGPEVIGENVEGKVINMNVAEHSGRTYYQFELEPPHVLITATAAGNRLYLFNVTANGL 240

Query: 241 QWKRHFSDLKRIADSFRVV 259
           QWKRH+ DLKRIADSFRVV
Sbjct: 241 QWKRHYGDLKRIADSFRVV 259

[Close]

BLAST of CmoCh09G010950 vs. TAIR 10
Match: AT1G77090.1 (Mog1/PsbP/DUF1795-like photosystem II reaction center PsbP family protein )

HSP 1 Score: 358.2 bits (918), Expect = 5.5e-99
Identity = 175/226 (77.43%), Postives = 195/226 (86.28%), Query Frame = 0


Query: 33  GGEKDNRSPILNRRSVLLSGVSLVSSAGLGLQSECLAAVKQGLLAGRIPGLSEPDEQGWR 92
           G E +  + +L+RRSV+ SG+ + S+  L    E LA VKQGLLAGR+PGLSEPDE+GWR
Sbjct: 36  GCEDEWCARVLSRRSVMASGL-VSSTTALAFPREGLAVVKQGLLAGRVPGLSEPDEEGWR 95

Query: 93  TYRRPDEKSGGHGVGWSPIIPYAFSVPQDWEEVPVSIADLGGTEIDLRFKSSKEGRLFVI 152
           TYRRPDEKSGGHGVGWSPIIPYAFSVPQDW EVPVSIADLGGTEIDLRF S KEGRL VI
Sbjct: 96  TYRRPDEKSGGHGVGWSPIIPYAFSVPQDWNEVPVSIADLGGTEIDLRFASPKEGRLSVI 155

Query: 153 VAPVQRFSDVIGDDATIEMVGPPEKVISAFGPEVIGENVEGKVMNMSVAEHNGRTYYQFE 212
           VAPV RF+D +GDD  IE +G P KVI+AFGPEVIGENVEGKV++ +VAEH+GR YYQFE
Sbjct: 156 VAPVLRFADNLGDDVKIENIGQPAKVINAFGPEVIGENVEGKVLSSNVAEHDGRLYYQFE 215

Query: 213 LEPPHVLITATAAGNRLYLFSVTGNGLQWKRHFSDLKRIADSFRVV 259
           LEPPHVLITATAAGNRLYLFSVTGNGLQWKRH+ DLKRIA SFR+V
Sbjct: 216 LEPPHVLITATAAGNRLYLFSVTGNGLQWKRHYKDLKRIASSFRIV 260

[Close]

BLAST of CmoCh09G010950 vs. TAIR 10
Match: AT3G56650.1 (Mog1/PsbP/DUF1795-like photosystem II reaction center PsbP family protein )

HSP 1 Score: 87.4 bits (215), Expect = 1.8e-17
Identity = 70/265 (26.42%), Postives = 130/265 (49.06%), Query Frame = 0


Query: 9   VPFSCNFHQS-KPPSHILQKGVPAVGGEKDNRSPILNRRSVLLSGVSLVSSAGLGLQSEC 68
           VP S  F  S K  + I  +    V   +  + P   RR  LL   ++   A L L+   
Sbjct: 7   VPTSKIFSVSPKSSASIKARSRVVVASSQQQQQP---RRRELLLKSAVAIPAILQLKEAP 66

Query: 69  LAAVKQGLLAGRIPGLSEPDEQGWRTYRRPDEKSGGHGVGWSPIIPYAFSVPQDWEEVPV 128
           ++A ++  +   +P    P +  +  ++     +     G   + PY F +P +W+++ +
Sbjct: 67  ISAAREVEVGSYLP--LSPSDPSFVLFKAKPSDTPALRAG--NVQPYQFVLPPNWKQLRI 126

Query: 129 SIADLGG--------TEIDLRFKSSKEGRLFVIVAPVQRFSDVIGDDATIEMVGPPEKVI 188
           +    G           I+++F++ K+G++ V+ +P+ R ++    +ATIE +G PEKVI
Sbjct: 127 ANILSGNYCQPKCAEPWIEVKFENEKQGKVQVVASPLIRLTN--KPNATIEDLGEPEKVI 186

Query: 189 SAFGPEVIGENVEG-KVMNMSVAEHNGRTYYQFELEPP------HVLITATAAGNRLYLF 248
           ++ GP V G + +  +++  S+ +   +TYY++ LE P      H L  ATA G+ + LF
Sbjct: 187 ASLGPFVTGNSYDSDELLKTSIEKIGDQTYYKYVLETPFALTGSHNLAKATAKGSTVVLF 246

Query: 249 SVTGNGLQWKRHFSDLKRIADSFRV 258
            V+    QW+     L+ I DSF++
Sbjct: 247 VVSATEKQWQSSQKTLEAILDSFQL 262

The following BLAST results are available for this feature:

BLAST of CmoCh09G010950 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
O49292	7.7e-98	77.43	PsbP domain-containing protein 4, chloroplastic OS=Arabidopsis thaliana OX=3702 ...	[more]
Q9LXX5	2.5e-16	26.42	PsbP domain-containing protein 6, chloroplastic OS=Arabidopsis thaliana OX=3702 ...	[more]

BLAST of CmoCh09G010950 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A6J1FDH1	7.9e-146	100.00	psbP domain-containing protein 4, chloroplastic OS=Cucurbita moschata OX=3662 GN...	[more]
A0A6J1IFH3	9.6e-144	98.45	psbP domain-containing protein 4, chloroplastic OS=Cucurbita maxima OX=3661 GN=L...	[more]
A0A6J1DKA3	5.3e-118	81.85	psbP domain-containing protein 4, chloroplastic OS=Momordica charantia OX=3673 G...	[more]
A0A0A0K501	1.7e-116	79.85	PsbP domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_7G322590 PE=4 S...	[more]
A0A5A7T2U1	2.3e-113	79.85	PsbP domain-containing protein 4 OS=Cucumis melo var. makuwa OX=1194695 GN=E5676...	[more]

BLAST of CmoCh09G010950 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_022936523.1	1.6e-145	100.00	psbP domain-containing protein 4, chloroplastic [Cucurbita moschata] >KAG7025035...	[more]
KAG6592174.1	1.1e-144	99.22	PsbP domain-containing protein 4, chloroplastic, partial [Cucurbita argyrosperma...	[more]
XP_023534875.1	6.8e-144	98.45	psbP domain-containing protein 4, chloroplastic [Cucurbita pepo subsp. pepo]	[more]
XP_022975015.1	2.0e-143	98.45	psbP domain-containing protein 4, chloroplastic [Cucurbita maxima]	[more]
XP_022154428.1	1.1e-117	81.85	psbP domain-containing protein 4, chloroplastic [Momordica charantia]	[more]

BLAST of CmoCh09G010950 vs. TAIR 10


Match Name	E-value	Identity	Description
AT1G77090.1	5.5e-99	77.43	Mog1/PsbP/DUF1795-like photosystem II reaction center PsbP family protein	[more]
AT3G56650.1	1.8e-17	26.42	Mog1/PsbP/DUF1795-like photosystem II reaction center PsbP family protein	[more]

InterPro

Analysis Name: InterPro Annotations of Cucurbita moschata (Rifu) v1
Date Performed: 2021-10-25


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR002683	PsbP, C-terminal	PFAM	PF01789	PsbP	coord: 114..257 e-value: 1.1E-11 score: 45.0
None	No IPR available	GENE3D	3.40.1000.10	Mog1/PsbP, alpha/beta/alpha sandwich	coord: 111..258 e-value: 5.1E-24 score: 87.2
None	No IPR available	PANTHER	PTHR31407	FAMILY NOT NAMED	coord: 32..258
None	No IPR available	PANTHER	PTHR31407:SF38	PSBP DOMAIN-CONTAINING PROTEIN 4, CHLOROPLASTIC	coord: 32..258
IPR016123	Mog1/PsbP, alpha/beta/alpha sandwich	SUPERFAMILY	55724	Mog1p/PsbP-like	coord: 106..257

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
CmoCh09G010950.1	CmoCh09G010950.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0015979	photosynthesis
cellular_component	GO:0009507	chloroplast
cellular_component	GO:0019898	extrinsic component of membrane
cellular_component	GO:0009654	photosystem II oxygen evolving complex
cellular_component	GO:0009523	photosystem II
molecular_function	GO:0005509	calcium ion binding