CmoCh09G010340 (gene) Cucurbita moschata (Rifu) v1
Overview
Sequences
The following sequences are available for this feature:
Legend: exonfive_prime_UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.GTTCGGTTCTTTCTCTAAGCTTCGAGTCTAAAATGTCGGCTGGGTTTTTCTTTGTGGCTAAATGGTCTCTAACCCATTGCGCCAAATTGCCTTCTCCAGGTAATGTCGGGTCCAGAGGGTGCCGCCCTGTTAGAACCTCCATTACCACTATACCGAAGCTGTACACATCGCTCTTCTCTGAGACTGTCAATATCGACCCATGTTCTGTAATCATCAGGTAATTATGAATCCATGGGGTTTATTTGCCGAAGGGTTTGGAAAGGGGGGGTTAGAAATGAACATACCTGGAGCCATGTACCCGAAAGAGCCAGCAAGTTGTCTGAGTATTGGCTTCTTTGAAGCATCATTGCTGTTGTTTGTACTCACATTACTGGCGAGACCAAAGTCGGCTAGGTATGGCTCAAAGTCATGGCCGAGCAGGACATTCAGTGTTTTCACATCGCCATGTACGATTGGTGGAGTACAATCATGGTGAAGATATGCTAGAGCATGAGCCACTCCTAAGAGGATGTCGTATCTGGCCTCCCATTCTGCTCCTCCTTTTCCATTGTCATGGATAAAAGAGCTCAAGCTTCCATTTGGAAGATAATCATAAAACAGGAGCTTCAAATTCCTGTGGGATCCCCAACCCAGTAGCCTTATTATGTTCTTGTGTCGAATTAATCCCAAAGTACGGATTTCAGAGTTGAAGCCTCCAGATTCGTCGGTTGACCACATTTTCTTCACTGCCACTGTTTTCCCTTTTGGGGTTGTGATTCTGTACACGGCACCAGAGCTTCCAGCACCGATCACGTTCGATTCAGTTAAGTTTTTAATGATGTAGTCGATTGAGATATCAAGTTTTTGAAACAGGGTTATTTCCCATTTATCGCCATCTATCAGTAGCATGAAATTAGCCATTTGTGTGCGAATTAGCAAGTAGATCGCTAAAAAGAAAAGCACTGCACTTATGCTGATCAAGATTGGCAGGACTATCTTTATTGCTTCTTTGCTTACGTTTCTGGATTCAAACTTGCCTTCAGGAATTACTTGCTCGCCTGAAACATAGAGGTCTTTGTTTCCAGCAATGGCGCTTTTACTGAGCTTTTGAAAGAATGGCGTGTCGGGCAATTCGCCGGAGAAGTGGTTGTAGGAGATGTTTAGAGTCACAAGGTTTTCAAGCTCTACAAGAAGGCTTAGGTCCCCAGAGAGGTTGTTATGGGAGAGGTCTAGAATACTTAGCCTGACGAGACCAGAGAATTCGGACGGGATTTCACCTGAGAAACGATTCCAACTTAGATTAAGAGCAATGTCAAGTGAAGAAATTATACCTAATTGCTTAGGGAGTTCCCCAGAGAAGAAATTGTTGCTGAGGTCTAAAAATTGAAGCTTTTGACAGGAAACAATTTCTGCTGGGATTTGCCCTGAAAGTTGGTTGTTTCTCAGGTCAAGTTTTGTTAGTTCCGTCAAAGCTCCGATGCCCGGGTTGACCTGACCTTCAAGCCTGTTGTTGGATATATTTAAAAACTGTAGGCTCATCGGCAGTTCGATTGGAAGAGTACCGGTGAACTCATTTGAACTGAGGTCAATAAACTGAAGAACGTCACAGTTCGATAACGATTGAGGAATTTCTCCAACAAAATGGTTTTCAGCTAAGTCCAGAAAATCTAAGCTCTTCAAATGTCCCATCTCTGATGGAATAGTACCTCCAAACCTATTCTTAGCCAGTCGAAACCTCGATAGTGTCCTACTATGTCCTATTTCAGGTGGAATGATTCCCGATAGATTATTTCGTATGAGAAGAAGTTTCGTGAGATTTTTCAAACCGAAGATCTCTTTCGGTATTGAACCCGTCAAGTGATTGTACGAGAAATCAATGGCCTGGAGATCAGGGCAGTCTGAGAGAGTGCTGGGAATACTGCCTGTTAATTTGTTCTCCCAAGCAAAAAATAAATGCAAGTTCTTAAGGTTGCCTACCGAAACCGGTATCTCGCCCGAAAGTTTGTTGTTGTCTACTTCCACATGAACCAAAGTCGAACAATTAAACATTTCCGGAGGTATTGAACCCGTAATCTGATTAAGACTTAGTTGAAACTCTTGAAGTTTAGGTAGCCGTCCTATACTTTTCGGTATGGTTCCATTTAGAAGATTTTCGGAAACGTCTAGGATTACGAGTTCCTCGCAGTCTCCAATCTCTTCTGGTATAGATTCTTCCAACAAGTTCAACCATAGAAAAAGTGTTTGAAGCTTTTTCAGCTTCCCAATTCCTCTAGGTATCCGCCCAGAAATGCTATTCTGATACAATATAAGAGTTTGCAACTCACTGCAGTTTCCGATCTCTTCCGGGATTGTGTTGAAAAGTTGTGCTTTATATATGACTATGTTCTGTATATTTTTCAGCATCCCAATCGATGAAGGAAGAGCTCCGAAGATTCCAGTTTCGGCTAGGCCTAACATGACTAAACTGCTGCAGTTTCCAATCTCCATTGGCAATTTACCTTCCAGAAGTTTATTCCCTCCAGCTCTGAAAAGATTAAGCTTCTGCAACATTCCAATGCTCTTTGGAATCTCCCCACTGATTTCATTGTCTGCGAGTCTAAGATACACGAGGTTCGAAAGATTCCCAATCGTTAACGGTATCGTCCCTTCAAACCCATTGCTTTGAAGGGACAAATCCTCCAGCTTCCCCAGCCTGCAAATCTCTTCTGGGATTTCTCCCAAAAGGTTATTTTGGCTAAGATCAAGAACTCTGAGCTCGTTATAATCTCCAAACTCTTTCGGGATTCTTCCGGTTATATTCGTCTCAGATATCACCAGGGTCCTCAAGAACTTAAGAGCCTGGAAATTCGATGGCAATGTACCTCGCAAATCCAGTGATGCCAGGGTTATCTCCTCTACATATCCATGGGAGTCGCAGACAACTCCAAACCATGAACACGGTGTCGGGTCCTCTGGATTCCATGTACTCAAAGCATCTGTAGAGCTCGTTAGATTACTCTTCCATGTGAGAAGAGCTCTACCCTGCTCATCAATGGAGTAACAACATGGAAAGAGACGGATACTTAGTGATAAAATCAAGGCTATGGTGAAGAATTGAGAAGGAATAAAGGGATTTCTTAGAATTGCAGCCATTGTTCTTCAAAACTTATGATACAAAATGATCTGATTTGGATTGAACAAAGGGGAAATCCATGTTTTGTTTATAGGAGAAGAAGAAAAAGAAGAACAGAGGTATGTGAATTCAAGATCCTTCTCTCTATTCCTTCTCTGGTTTGGTTCTTAGTTCTTAATACGGGAATATGGTTTTTTCTCTCCCTGTTTTTAATCTTTATTAAGCAAACAGTTCATTTTTCCTTTTGTTCTTTCCTTTGGTTAGCAAATCCTCATAAAATGGTTGTTTTTTTTTTGTTAAATATTCACCTTAGTTCATAATGTTTTAGGGAAATTCTCAACTTAGTCCTCTTAACTTTTTAAAATTCTCAATTTGTTCTATATCATTTTGTTCTTCTCTGTTTACTGAAAGGTGATTGATTGATCAATAATTTATGCTTTTATTGGACAGGTGCATTCCATGTGTCGTGTTCGATACGAGAATATGTTGATGCTTCGATTGAGAAAAGTCAAAAGATGAGGGGTAAGTTTAAAAATTTTAAAAGATTGAGGACCGAATTGAGAATTTTTCGAACGATGGTGGTTACTCGTTTTTTTTTTTCATTAGTTGCAACATAAGTTGTTGGGGGAGTTTTGTTTATGGTAGGAACGATTAGAAATGACACGTCTTTTCTATTGATATGAACTACTTTAGCCAACTTATATGGTTATTTATGGTTAAAATATAACCTCTTCATATGGCTATTTGAATCAAGGTTTCGGGTTGATCGACCTCTCGACATTGGAGAAACCGTCGAGGTCTTGGCCTTAACTTGAATATAGTAATGGATAACTACGCCCTTGGAGACTGA GTTCGGTTCTTTCTCTAAGCTTCGAGTCTAAAATGTCGGCTGGGTTTTTCTTTGTGGCTAAATGGTCTCTAACCCATTGCGCCAAATTGCCTTCTCCAGGTAATGTCGGGTCCAGAGGGTGCCGCCCTGTTAGAACCTCCATTACCACTATACCGAAGCTGTACACATCGCTCTTCTCTGAGACTGTCAATATCGACCCATGTTCTGTAATCATCAGGAGCTTCAAATTCCTGTGGGATCCCCAACCCAGTAGCCTTATTATGTTCTTGTGTCGAATTAATCCCAAAGTACGGATTTCAGAGTTGAAGCCTCCAGATTCGTCGGTTGACCACATTTTCTTCACTGCCACTGTTTTCCCTTTTGGGGTTGTGATTCTGTACACGGCACCAGAGCTTCCAGCACCGATCACGTTCGATTCAGTTAACAATGGCGCTTTTACTGAGCTTTTGAAAGAATGGCGTGTCGGGCAATTCGCCGGAGAAGTGGAGATGTTTAGAGTCACAAGGTTTTCAAGCTCTACAAGAAGGCTTAGGTCCCCAGAGAGGTTGTTATGGGAGAGGTCTAGAATACTTAGCCTGACGAGACCAGAGAATTCGGACGGGATTTCACCTGAGAAACGATTCCAACTTAGATTAAGAGCAATGTCAAGTGAAGAAATTATACCTAATTGCTTAGGGAGTTCCCCAGAGAAGAAATTGTTGCTGAGGCTCATCGGCAGTTCGATTGGAAGAGTACCGGTGAACTCATTTGAACTGAGCATCCCAATCGATGAAGGAAGAGCTCCGAAGATTCCAGTTTCGGCTAGGCCTAACATGACTAAACTGCTGCAGTTTCCAATCTCCATTGGCAATTTACCTTCCAGAAGTTTATTCCCTCCAGCTCTGAAAAGATTAAGCTTCTGCAACATTCCAATGCTCTTTGGAATCTCCCCACTGATTTCATTGTCTGCGAGTCTAAGATACACGAGGTTCGAAAGATTCCCAATCGTTAACGATATCACCAGGGTCCTCAAGAACTTAAGAGCCTGGAAATTCGATGGCAATGTACCTCGCAAATCCAGTGATGCCAGGGTTATCTCCTCTACATATCCATGGGAGTCGCAGACAACTCCAAACCATGAACACGGTGTCGGGTCCTCTGGATTCCATGTACTCAAAGCATCTGTAGAGCTCGTTAGATTACTCTTCCATGAGAAGAAGAAAAAGAAGAACAGAGGTGCATTCCATGTGTCGTGTTCGATACGAGAATATGTTGATGCTTCGATTGAGAAAAGTCAAAAGATGAGGGTAATGGATAACTACGCCCTTGGAGACTGA ATGTCGGCTGGGTTTTTCTTTGTGGCTAAATGGTCTCTAACCCATTGCGCCAAATTGCCTTCTCCAGGTAATGTCGGGTCCAGAGGGTGCCGCCCTGTTAGAACCTCCATTACCACTATACCGAAGCTGTACACATCGCTCTTCTCTGAGACTGTCAATATCGACCCATGTTCTGTAATCATCAGGAGCTTCAAATTCCTGTGGGATCCCCAACCCAGTAGCCTTATTATGTTCTTGTGTCGAATTAATCCCAAAGTACGGATTTCAGAGTTGAAGCCTCCAGATTCGTCGGTTGACCACATTTTCTTCACTGCCACTGTTTTCCCTTTTGGGGTTGTGATTCTGTACACGGCACCAGAGCTTCCAGCACCGATCACGTTCGATTCAGTTAACAATGGCGCTTTTACTGAGCTTTTGAAAGAATGGCGTGTCGGGCAATTCGCCGGAGAAGTGGAGATGTTTAGAGTCACAAGGTTTTCAAGCTCTACAAGAAGGCTTAGGTCCCCAGAGAGGTTGTTATGGGAGAGGTCTAGAATACTTAGCCTGACGAGACCAGAGAATTCGGACGGGATTTCACCTGAGAAACGATTCCAACTTAGATTAAGAGCAATGTCAAGTGAAGAAATTATACCTAATTGCTTAGGGAGTTCCCCAGAGAAGAAATTGTTGCTGAGGCTCATCGGCAGTTCGATTGGAAGAGTACCGGTGAACTCATTTGAACTGAGCATCCCAATCGATGAAGGAAGAGCTCCGAAGATTCCAGTTTCGGCTAGGCCTAACATGACTAAACTGCTGCAGTTTCCAATCTCCATTGGCAATTTACCTTCCAGAAGTTTATTCCCTCCAGCTCTGAAAAGATTAAGCTTCTGCAACATTCCAATGCTCTTTGGAATCTCCCCACTGATTTCATTGTCTGCGAGTCTAAGATACACGAGGTTCGAAAGATTCCCAATCGTTAACGATATCACCAGGGTCCTCAAGAACTTAAGAGCCTGGAAATTCGATGGCAATGTACCTCGCAAATCCAGTGATGCCAGGGTTATCTCCTCTACATATCCATGGGAGTCGCAGACAACTCCAAACCATGAACACGGTGTCGGGTCCTCTGGATTCCATGTACTCAAAGCATCTGTAGAGCTCGTTAGATTACTCTTCCATGAGAAGAAGAAAAAGAAGAACAGAGGTGCATTCCATGTGTCGTGTTCGATACGAGAATATGTTGATGCTTCGATTGAGAAAAGTCAAAAGATGAGGGTAATGGATAACTACGCCCTTGGAGACTGA MSAGFFFVAKWSLTHCAKLPSPGNVGSRGCRPVRTSITTIPKLYTSLFSETVNIDPCSVIIRSFKFLWDPQPSSLIMFLCRINPKVRISELKPPDSSVDHIFFTATVFPFGVVILYTAPELPAPITFDSVNNGAFTELLKEWRVGQFAGEVEMFRVTRFSSSTRRLRSPERLLWERSRILSLTRPENSDGISPEKRFQLRLRAMSSEEIIPNCLGSSPEKKLLLRLIGSSIGRVPVNSFELSIPIDEGRAPKIPVSARPNMTKLLQFPISIGNLPSRSLFPPALKRLSFCNIPMLFGISPLISLSASLRYTRFERFPIVNDITRVLKNLRAWKFDGNVPRKSSDARVISSTYPWESQTTPNHEHGVGSSGFHVLKASVELVRLLFHEKKKKKNRGAFHVSCSIREYVDASIEKSQKMRVMDNYALGD Homology
BLAST of CmoCh09G010340 vs. ExPASy TrEMBL
Match: A0A2P2NSJ1 (Uncharacterized protein OS=Rhizophora mucronata OX=61149 PE=4 SV=1) HSP 1 Score: 77.4 bits (189), Expect = 1.6e-10 Identity = 35/54 (64.81%), Postives = 40/54 (74.07%), Query Frame = 0
BLAST of CmoCh09G010340 vs. ExPASy TrEMBL
Match: A0A0N7KK81 (Os05g0170250 protein OS=Oryza sativa subsp. japonica OX=39947 GN=Os05g0170250 PE=4 SV=1) HSP 1 Score: 60.8 bits (146), Expect = 1.5e-05 Identity = 63/198 (31.82%), Postives = 86/198 (43.43%), Query Frame = 0
BLAST of CmoCh09G010340 vs. ExPASy TrEMBL
Match: A0A0A9RW21 (Uncharacterized protein OS=Arundo donax OX=35708 PE=4 SV=1) HSP 1 Score: 57.0 bits (136), Expect = 2.2e-04 Identity = 50/167 (29.94%), Postives = 75/167 (44.91%), Query Frame = 0
BLAST of CmoCh09G010340 vs. ExPASy TrEMBL
Match: T1MNT2 (Uncharacterized protein OS=Triticum urartu OX=4572 PE=4 SV=1) HSP 1 Score: 57.0 bits (136), Expect = 2.2e-04 Identity = 73/255 (28.63%), Postives = 102/255 (40.00%), Query Frame = 0
BLAST of CmoCh09G010340 vs. ExPASy TrEMBL
Match: A0A0A9VR44 (Uncharacterized protein OS=Arundo donax OX=35708 PE=4 SV=1) HSP 1 Score: 56.6 bits (135), Expect = 2.9e-04 Identity = 50/167 (29.94%), Postives = 75/167 (44.91%), Query Frame = 0
BLAST of CmoCh09G010340 vs. NCBI nr
Match: KAG7024988.1 (hypothetical protein SDJN02_13808, partial [Cucurbita argyrosperma subsp. argyrosperma]) HSP 1 Score: 348.6 bits (893), Expect = 7.7e-92 Identity = 171/177 (96.61%), Postives = 176/177 (99.44%), Query Frame = 0
BLAST of CmoCh09G010340 vs. NCBI nr
Match: KAG7024990.1 (hypothetical protein SDJN02_13810, partial [Cucurbita argyrosperma subsp. argyrosperma]) HSP 1 Score: 225.3 bits (573), Expect = 9.8e-55 Identity = 109/111 (98.20%), Postives = 110/111 (99.10%), Query Frame = 0
BLAST of CmoCh09G010340 vs. NCBI nr
Match: KAG8492759.1 (hypothetical protein CXB51_010492 [Gossypium anomalum]) HSP 1 Score: 131.3 bits (329), Expect = 1.9e-26 Identity = 74/160 (46.25%), Postives = 91/160 (56.88%), Query Frame = 0
BLAST of CmoCh09G010340 vs. NCBI nr
Match: KAF5823075.1 (hypothetical protein HanXRQr2_Chr01g0034301 [Helianthus annuus]) HSP 1 Score: 72.8 bits (177), Expect = 8.1e-09 Identity = 54/128 (42.19%), Postives = 70/128 (54.69%), Query Frame = 0
BLAST of CmoCh09G010340 vs. NCBI nr
Match: KAG8638095.1 (hypothetical protein MANES_15G191810v8 [Manihot esculenta]) HSP 1 Score: 63.5 bits (153), Expect = 4.9e-06 Identity = 54/161 (33.54%), Postives = 71/161 (44.10%), Query Frame = 0
The following BLAST results are available for this feature:
Relationships
The following mRNA feature(s) are a part of this gene:
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