
CmoCh09G009430 (gene) Cucurbita moschata (Rifu) v1
Overview
Sequences
The following sequences are available for this feature:
Legend: exonCDSpolypeptidethree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below.ATGGTCGTAGCTCAGCTAGCAATCAAATATTACTCGTTCTTTTTAATTCATTATAATATTATCTATGTGGCTAAACCTAATTAAAAGGTCAAATACACATGGTTTAACTATTGTTGCAGGAGGGTGATATTATTGATATTTTAGCATGGGATGAATGGTGGGACTATGAACTCAACAAAGATCCATCCAATCCCCACATTGCATTGCTTCCTTTGCATCCTGATTTGAGGGCCAAGTTTAATGAAACTGCTGCATGGGAGTATGCAAGGAGCATGGTTAAGAAACCCTATGGCTATCATAACTTGATTTTCAGCTGGATTGACACCACCCACGGAAACTATCCTTCTCCCTTGGATGCCCATATGGTAAAAAACAAACATATATACTTAGTTTACTAACGTTTCCGCTCCTCAGGTTAAAAAAACATTTTTAGTCCCATAACTTTTATAGCTATTTAGTCTTTATACTTTCAAATTTTGTAACAGCTTAATCTCCACCATGCAAAATTTCATAACATTTTAGTAATATTTTTCATGGTAGGATATTATAGATGTTCAGGGACTAAATTATTATTTTCACGAAGGTTCAGTGTGAGATCCTACATCGGTTGGAGAAGGGAACGAAGCATTCTTTACAAGAGTGTGGAAACCTCTCCCTAGCATACGCGTTTTAAAATCGTGAGGCTGACAGCGATACGTAACAGGCCAAAGTAGACCATATCTGCTAGCGGTGGGCTTGAGCTATTACAAATAGTATCACTGGGTCCCAAGAGGGGTGAATTGTGAGATCCCACATCGGTTGGAGAGGGGAACAAAGCATTCCTTAAGAATGTGGAAACCTCTCCTTAGCACACGCATTTTAAAACCATGAGGCTAATGACGATACATAACGAGCCAAAGCAGACAATATCTGTTAGCGATGGAATTGGGATGTGATGTTACATTCTAACCGGGACCAAAAGTAAATCTTTTGAATTTGATTGTTGGCACTATTTGAAACTACAGGTTGCTTCTGCTATGACTATATGGAATCAAATGCAGCCGACCCTGGCAACAAAGTTGTGGAATGAAGCTCTAAACATACGACTTGGAACAAAGGTAGTTTTCATCAATGATTGGAATATCCACAAAGTTGAAATCCCGATAGTGATATCGACGTTAATATTTTTTAACCCTTAATATTTTTGGGTACTTAAAAAGTAATTTCGAACGTGTCCTCGATCCGAACAGCTTTGAAATTCGGAATGGTCATTATGTTGGTTTATATGGCAGGGGCTTGAGCTTCCTGAGATTCTAGTTGAAGTGGAAAAGCGAGGATCATCTTTTGGGGAACTACTGGCTATTCCTGAACAGGATGATTGGATCTATGAAGACGGGAAATCAGCATCATGTGTTGCTTTTGTCCTTCAAATTTACAAGGCAGCTGGCCTTTTTGGTCCGCTTGCTACCTCAATTCAAGCCACAGAGTTCACTGTAAGTTCCCTCACAATCTTCTGCTCTATATGTTTACATTGTTAAGAGCTTGGCCAATTTGTGTCATTCTTATTATTTTGTGCTGTTTGTGGGTAAAAGACATTGAAGAAACTAGCCTGCATTTTTTTAGGTTAAATATCTGATGTTTGAGTAAGTGAATGATACATGAATGAACTAAAACTACGTCAGAATGAGCGATCTTTAGGATATGGTGGTTAAGAAAAACTTAAAAGAGTTGAAAGTTACTACCTATACCAACAAGGTGCATCTTCTTTTTCTGGGTGACTTAATTATAGAAACTCGAAAGTTAAGCGTGTTTAGCTAGGAGCAATTCTATGCTGGACTACTATGAATTTTTCTAAGAAACATGTGAGTGAGAAAAAAACATGATAAAAGGTCTCCTGTTGGTTGATGAGGATAATAGTCTTCACTCTAAAGCGACAAGTATGTAACGTGGTTGTCATAGGAGAGGTAAGAGAATGTTGAGGCCATCTAGTGTTGAATTTGGATTCCATATCCTAGTCCGAGTCCTGGGTATGATGCATTACAAAATAGGTAAGGTATTTCTACTAGACACTAAATTGATAGTTTAGCGATCTATTCGACACTAAGAGACTTTTGGATACAAAAAGAAAGTTTCGGATTTATCAAAAACTTTTAAAATTCAATGACCTACTAGACATAATATAACAACCCAAGCCCACCCGCTAATAGATATTGTCGGCTTTGGCCCATTACGTATCGCCTTCAACCTCACAATTTTAAAATGCGTCTGCTAGGGAGAGGTTTCCACACCTTTATAAATAATGTTTCGTTCCCCTCTCCAACCGATGTGGGATCTCACAATTCATCCCCTTCGAGATCCAACATCCTTGCTGACACTCGTTCTCCGCTCCAATCGATTTGAGATCTCACAATTCATCCCCTTCGAGGCTAAGCATCCTCGCTGGCACTCGTTCCCCTCTCCAATCGTTGTGGGATCTCACACAAAATTTAAAGTTCATAAACTAATGACCTGTTTGGTATACCTATTCTTTGTATAATTCTTCCATTCTTCTCAAGTCAAAGTTCTCGGTTAATGACCTATTCGAGATATTCTTCCAGCAATTGTGCTACATTTCTCGGGTTTTTTTGTAGATCGAGTTACTAAAATGGATGATTTTGATCTTTCTTGATATGCTTTGATGCAGATAAAAGATGCATACAATCTCAACTTTTATGAAAACAATTCAAGCCGGCTCCCAAAATGGTGCAATGGTGGGGATAATGTGACGCTTCCATATTGTCAAATTCTTGGAAGGTATAGAATGGATTTGCCTGGATATAATACCATCCAACCCCATCAACATATGAACGAAAGGTGCCCTTCTCTTCCAACTTACTTCCATCCAAACAACTGCTAGAAACCCTCTTCAAGGTTTCTTTCGTGTCGTGCGGGTTGGCTCTTGAATACTTGATGATAATAAGTAGTCTTGCCTTTAGTTTAAGGTTTGATGGGATACTCACTAATAACAGACGTACCTAGAAATAAGACGTCTTACAATAAAGTAATAAGAAGTTCATCATTTCGTTTAAGATTTGGTGGGATGTCCATACATAACATATGTATATTGTATTGAAAATATTTTTACATTAAGCAGGGGACGGGACAGGACAGGGCGGGGAATTGGACAAAGATGGGAACGAGGAATATAATCCCTAGTGTGAACACCCTTAGCACAACTTATACGGTACGTGTTTAGATTTTCACATCGACGGTAACAAAGAAAACATAAAAATGAACTGAAACTTATACAACATTACAGACAACTGAAATCATAACGATCTACATAAAAGACAAGATTAAACATAGAATGAAAGTTTAGAATATTACATTACAAGTCACCCACGACTAGTCGATTCGTGCTAAGTTTGTTCATAATTTGGGGTAAAGTTGAATGGGTAACCCTTTGTTGGGCATCAAGCTTGGATCTCTGGTCAAGAAGTCTTGTGAAGAGAGCTTCCAAGTGAACTGAGTGATTATGTAATGAATAGTGACAAGAGTTTCAAGCTTTGCAAACTCGTAGCCAGGGCAAATTCTGGGTCCTCCACCAAAGGCGATGAAAGATAAGGGTGGTGGAATGGACGTCTGGTTCTGATCAAATCTACTTGGTTCAAACTTTTGTGGGTCTCTGAATATTTTCTCGTCCAAATGGGTCATTGATGCCGCCCAAAATATCTGAATTCAGTGAATGGTAGTTCATCAATGTCGGGTTTAGAAGGACAAATGAAAAGAAAAGGGAAATGGGTTTGAGTTAATACTCGTCGACTTATGAGTTTATTACCTGAACTTTAAAAGAATATTGTAAAAACCGTAAAGACTTATGAGTTTAGTACCTGAACTTCAAAAGAATATTGTAAAAACCGTAAAGA ATGGTCGTAGCTCAGCTAGCAATCAAATATTACTCGTTCTTTTTAATTCATTATAATATTATCTATGAGGGTGATATTATTGATATTTTAGCATGGGATGAATGGTGGGACTATGAACTCAACAAAGATCCATCCAATCCCCACATTGCATTGCTTCCTTTGCATCCTGATTTGAGGGCCAAGTTTAATGAAACTGCTGCATGGGAGTATGCAAGGAGCATGGGGCTTGAGCTTCCTGAGATTCTAGTTGAAGTGGAAAAGCGAGGATCATCTTTTGGGGAACTACTGGCTATTCCTGAACAGGATGATTGGATCTATGAAGACGGGAAATCAGCATCATGTGTTGCTTTTGTCCTTCAAATTTACAAGGCAGCTGGCCTTTTTGGTCCGCTTGCTACCTCAATTCAAGCCACAGAGTTCACTATAAAAGATGCATACAATCTCAACTTTTATGAAAACAATTCAAGCCGGCTCCCAAAATGGTGCAATGGTGGGGATAATGTGACGCTTCCATATTGTCAAATTCTTGGAAGGTATAGAATGGATTTGCCTGGATATAATACCATCCAACCCCATCAACATATGAACGAAAGGTGCCCTTCTCTTCCAACTTACTTCCATCCAAACAACTGCTAGAAACCCTCTTCAAGGTTTCTTTCGTGTCGTGCGGGTTGGCTCTTGAATACTTGATGATAATAAGTAGTCTTGCCTTTAGTTTAAGGTTTGATGGGATACTCACTAATAACAGACGTACCTAGAAATAAGACGTCTTACAATAAAGTAATAAGAAGTTCATCATTTCGTTTAAGATTTGGTGGGATGTCCATACATAACATATGTATATTGTATTGAAAATATTTTTACATTAAGCAGGGGACGGGACAGGACAGGGCGGGGAATTGGACAAAGATGGGAACGAGGAATATAATCCCTAGTGTGAACACCCTTAGCACAACTTATACGGTACGTGTTTAGATTTTCACATCGACGGTAACAAAGAAAACATAAAAATGAACTGAAACTTATACAACATTACAGACAACTGAAATCATAACGATCTACATAAAAGACAAGATTAAACATAGAATGAAAGTTTAGAATATTACATTACAAGTCACCCACGACTAGTCGATTCGTGCTAAGTTTGTTCATAATTTGGGGTAAAGTTGAATGGGTAACCCTTTGTTGGGCATCAAGCTTGGATCTCTGGTCAAGAAGTCTTGTGAAGAGAGCTTCCAAGTGAACTGAGTGATTATGTAATGAATAGTGACAAGAGTTTCAAGCTTTGCAAACTCGTAGCCAGGGCAAATTCTGGGTCCTCCACCAAAGGCGATGAAAGATAAGGGTGGTGGAATGGACGTCTGGTTCTGATCAAATCTACTTGGTTCAAACTTTTGTGGGTCTCTGAATATTTTCTCGTCCAAATGGGTCATTGATGCCGCCCAAAATATCTGAATTCAGTGAATGGTAGTTCATCAATGTCGGGTTTAGAAGGACAAATGAAAAGAAAAGGGAAATGGGTTTGAGTTAATACTCGTCGACTTATGAGTTTATTACCTGAACTTTAAAAGAATATTGTAAAAACCGTAAAGACTTATGAGTTTAGTACCTGAACTTCAAAAGAATATTGTAAAAACCGTAAAGA ATGGTCGTAGCTCAGCTAGCAATCAAATATTACTCGTTCTTTTTAATTCATTATAATATTATCTATGAGGGTGATATTATTGATATTTTAGCATGGGATGAATGGTGGGACTATGAACTCAACAAAGATCCATCCAATCCCCACATTGCATTGCTTCCTTTGCATCCTGATTTGAGGGCCAAGTTTAATGAAACTGCTGCATGGGAGTATGCAAGGAGCATGGGGCTTGAGCTTCCTGAGATTCTAGTTGAAGTGGAAAAGCGAGGATCATCTTTTGGGGAACTACTGGCTATTCCTGAACAGGATGATTGGATCTATGAAGACGGGAAATCAGCATCATGTGTTGCTTTTGTCCTTCAAATTTACAAGGCAGCTGGCCTTTTTGGTCCGCTTGCTACCTCAATTCAAGCCACAGAGTTCACTATAAAAGATGCATACAATCTCAACTTTTATGAAAACAATTCAAGCCGGCTCCCAAAATGGTGCAATGGTGGGGATAATGTGACGCTTCCATATTGTCAAATTCTTGGAAGGTATAGAATGGATTTGCCTGGATATAATACCATCCAACCCCATCAACATATGAACGAAAGGTGCCCTTCTCTTCCAACTTACTTCCATCCAAACAACTGCTAG MVVAQLAIKYYSFFLIHYNIIYEGDIIDILAWDEWWDYELNKDPSNPHIALLPLHPDLRAKFNETAAWEYARSMGLELPEILVEVEKRGSSFGELLAIPEQDDWIYEDGKSASCVAFVLQIYKAAGLFGPLATSIQATEFTIKDAYNLNFYENNSSRLPKWCNGGDNVTLPYCQILGRYRMDLPGYNTIQPHQHMNERCPSLPTYFHPNNC Homology
BLAST of CmoCh09G009430 vs. ExPASy TrEMBL
Match: A0A6J1FDN3 (uncharacterized protein LOC111443054 isoform X2 OS=Cucurbita moschata OX=3662 GN=LOC111443054 PE=4 SV=1) HSP 1 Score: 384.0 bits (985), Expect = 3.9e-103 Identity = 189/250 (75.60%), Postives = 189/250 (75.60%), Query Frame = 0
BLAST of CmoCh09G009430 vs. ExPASy TrEMBL
Match: A0A6J1FD86 (uncharacterized protein LOC111443054 isoform X1 OS=Cucurbita moschata OX=3662 GN=LOC111443054 PE=4 SV=1) HSP 1 Score: 384.0 bits (985), Expect = 3.9e-103 Identity = 189/250 (75.60%), Postives = 189/250 (75.60%), Query Frame = 0
BLAST of CmoCh09G009430 vs. ExPASy TrEMBL
Match: A0A6J1INK6 (uncharacterized protein LOC111476862 isoform X3 OS=Cucurbita maxima OX=3661 GN=LOC111476862 PE=4 SV=1) HSP 1 Score: 377.1 bits (967), Expect = 4.8e-101 Identity = 186/250 (74.40%), Postives = 188/250 (75.20%), Query Frame = 0
BLAST of CmoCh09G009430 vs. ExPASy TrEMBL
Match: A0A6J1IJL0 (uncharacterized protein LOC111476862 isoform X4 OS=Cucurbita maxima OX=3661 GN=LOC111476862 PE=4 SV=1) HSP 1 Score: 377.1 bits (967), Expect = 4.8e-101 Identity = 186/250 (74.40%), Postives = 188/250 (75.20%), Query Frame = 0
BLAST of CmoCh09G009430 vs. ExPASy TrEMBL
Match: A0A6J1F7G1 (uncharacterized protein LOC111443053 isoform X4 OS=Cucurbita moschata OX=3662 GN=LOC111443053 PE=4 SV=1) HSP 1 Score: 325.9 bits (834), Expect = 1.3e-85 Identity = 159/251 (63.35%), Postives = 175/251 (69.72%), Query Frame = 0
BLAST of CmoCh09G009430 vs. NCBI nr
Match: XP_022936434.1 (uncharacterized protein LOC111443054 isoform X2 [Cucurbita moschata] >XP_022936435.1 uncharacterized protein LOC111443054 isoform X2 [Cucurbita moschata]) HSP 1 Score: 384.0 bits (985), Expect = 8.2e-103 Identity = 189/250 (75.60%), Postives = 189/250 (75.60%), Query Frame = 0
BLAST of CmoCh09G009430 vs. NCBI nr
Match: XP_022936433.1 (uncharacterized protein LOC111443054 isoform X1 [Cucurbita moschata]) HSP 1 Score: 384.0 bits (985), Expect = 8.2e-103 Identity = 189/250 (75.60%), Postives = 189/250 (75.60%), Query Frame = 0
BLAST of CmoCh09G009430 vs. NCBI nr
Match: KAG6592035.1 (hypothetical protein SDJN03_14381, partial [Cucurbita argyrosperma subsp. sororia]) HSP 1 Score: 381.7 bits (979), Expect = 4.0e-102 Identity = 188/250 (75.20%), Postives = 189/250 (75.60%), Query Frame = 0
BLAST of CmoCh09G009430 vs. NCBI nr
Match: XP_023535434.1 (uncharacterized protein LOC111796872 [Cucurbita pepo subsp. pepo]) HSP 1 Score: 379.4 bits (973), Expect = 2.0e-101 Identity = 187/250 (74.80%), Postives = 188/250 (75.20%), Query Frame = 0
BLAST of CmoCh09G009430 vs. NCBI nr
Match: XP_022976474.1 (uncharacterized protein LOC111476862 isoform X3 [Cucurbita maxima]) HSP 1 Score: 377.1 bits (967), Expect = 1.0e-100 Identity = 186/250 (74.40%), Postives = 188/250 (75.20%), Query Frame = 0
BLAST of CmoCh09G009430 vs. TAIR 10
Match: AT4G27020.1 (unknown protein; FUNCTIONS IN: molecular_function unknown; LOCATED IN: vacuole; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT5G54870.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). ) HSP 1 Score: 287.3 bits (734), Expect = 9.7e-78 Identity = 138/249 (55.42%), Postives = 162/249 (65.06%), Query Frame = 0
BLAST of CmoCh09G009430 vs. TAIR 10
Match: AT5G54870.1 (unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: vacuole; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 15 growth stages; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT4G27020.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). ) HSP 1 Score: 278.5 bits (711), Expect = 4.5e-75 Identity = 135/249 (54.22%), Postives = 162/249 (65.06%), Query Frame = 0
BLAST of CmoCh09G009430 vs. TAIR 10
Match: AT1G70160.1 (unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: endomembrane system; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 15 growth stages; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT4G27020.1); Has 108 Blast hits to 108 proteins in 20 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 89; Viruses - 0; Other Eukaryotes - 19 (source: NCBI BLink). ) HSP 1 Score: 231.1 bits (588), Expect = 8.2e-61 Identity = 119/249 (47.79%), Postives = 144/249 (57.83%), Query Frame = 0
The following BLAST results are available for this feature:
InterPro
Analysis Name: InterPro Annotations of Cucurbita moschata (Rifu) v1
Date Performed: 2021-10-25
Relationships
The following mRNA feature(s) are a part of this gene:
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