CmoCh09G009110 (gene) Cucurbita moschata (Rifu) v1

Overview
NameCmoCh09G009110
Typegene
OrganismCucurbita moschata (Cucurbita moschata (Rifu) v1)
DescriptionUnknown protein
LocationCmo_Chr09: 4764130 .. 4764715 (-)
RNA-Seq ExpressionCmoCh09G009110
SyntenyCmoCh09G009110
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: polypeptideexonCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGGCAATGGAAGTGTCAGCCACTTTCCAAAGAGGCGCGTGGTTTAAAATCTTTCTAGAAACACAACCCACAAGAAAAAACCAAGAATTTTCAGACTCCTTTCCCCACCGTGTGGTCGGCGGAGTCTTCCGCCGTCAAGTCCGGTCCAACCTCCGTCACTCCCCGCGGTACATCACCGTCACCCCACCGTTACCGTTAAATCCCGTCAAGAACAATAAAAACCCTCTCCCCTCCCCTTCAGCTTCATTTTTCAAACATCAACCCGTTCTGTTCTTCACTAATTCTTCAAAATTAGAACACCCATAAGAACAGAACACCCAGAAATTCTTCCATTAATCCTTCACCAAAAAACCCACAAGCGGAATCACAATCTTTCCCATTTTCAGCTCCAAATTTCAGGTGAAAATCGAATCTCCCAACATTACTCTGTTCTGTTCCTAATCGATTCATGTTTTTCTGCGATTTGGATTTGAATTTCTTTGTCCCATTCTGTCGGAAACAAGTAGAAAACCTTATGTTGTTCTTGTTTGTGTGTGTTTTTTGTTTGTCGCAGGTTGATTCTTGTTGTTCTTCTGTTGGATATTGA

mRNA sequence

ATGGCAATGGAAGTGTCAGCCACTTTCCAAAGAGGCGCGTGGTTTAAAATCTTTCTAGAAACACAACCCACAAGAAAAAACCAAGAATTTTCAGACTCCTTTCCCCACCGTGTGGTCGGCGGAGTCTTCCGCCGTCAAGTCCGGTCCAACCTCCGTCACTCCCCGCGGTACATCACCGTCACCCCACCGTTACCGTTAAATCCCGTCAAGAACAATAAAAACCCTCTCCCCTCCCCTTCAGCTTCATTTTTCAAACATCAACCCGTTGATTCTTGTTGTTCTTCTGTTGGATATTGA

Coding sequence (CDS)

ATGGCAATGGAAGTGTCAGCCACTTTCCAAAGAGGCGCGTGGTTTAAAATCTTTCTAGAAACACAACCCACAAGAAAAAACCAAGAATTTTCAGACTCCTTTCCCCACCGTGTGGTCGGCGGAGTCTTCCGCCGTCAAGTCCGGTCCAACCTCCGTCACTCCCCGCGGTACATCACCGTCACCCCACCGTTACCGTTAAATCCCGTCAAGAACAATAAAAACCCTCTCCCCTCCCCTTCAGCTTCATTTTTCAAACATCAACCCGTTGATTCTTGTTGTTCTTCTGTTGGATATTGA

Protein sequence

MAMEVSATFQRGAWFKIFLETQPTRKNQEFSDSFPHRVVGGVFRRQVRSNLRHSPRYITVTPPLPLNPVKNNKNPLPSPSASFFKHQPVDSCCSSVGY
Homology
[Close]
BLAST of CmoCh09G009110 vs. ExPASy TrEMBL
Match: A0A0A0LBC3 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_3G405520 PE=4 SV=1)

HSP 1 Score: 77.4 bits (189), Expect = 3.7e-11
Identity = 39/56 (69.64%), Postives = 43/56 (76.79%), Query Frame = 0 

Query: 22 QPTRKNQEFSDSFPHRVVGGVFRRQVRSNLRHSPRYITVTPPLPLNPVKNNKNPLP 78
          Q +RKNQEFSDSFPHRVVG VFRRQV SNLRHSPRY      + +N  +NNK PLP
Sbjct: 9  QYSRKNQEFSDSFPHRVVGEVFRRQVLSNLRHSPRYNNDLLSVTVNSRQNNKTPLP 64

[Close]
BLAST of CmoCh09G009110 vs. NCBI nr
Match: KAE8650678.1 (hypothetical protein Csa_010607, partial [Cucumis sativus])

HSP 1 Score: 77.4 bits (189), Expect = 7.6e-11
Identity = 39/56 (69.64%), Postives = 43/56 (76.79%), Query Frame = 0 

Query: 22 QPTRKNQEFSDSFPHRVVGGVFRRQVRSNLRHSPRYITVTPPLPLNPVKNNKNPLP 78
          Q +RKNQEFSDSFPHRVVG VFRRQV SNLRHSPRY      + +N  +NNK PLP
Sbjct: 9  QYSRKNQEFSDSFPHRVVGEVFRRQVLSNLRHSPRYNNDLLSVTVNSRQNNKTPLP 64

The following BLAST results are available for this feature:
BLAST of CmoCh09G009110 vs.
Match NameE-valueIdentityDescription
BLAST of CmoCh09G009110 vs. ExPASy TrEMBL
Match NameE-valueIdentityDescription
A0A0A0LBC33.7e-1169.64Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_3G405520 PE=4 SV=1[more]
BLAST of CmoCh09G009110 vs. NCBI nr
Match NameE-valueIdentityDescription
KAE8650678.17.6e-1169.64hypothetical protein Csa_010607, partial [Cucumis sativus][more]
BLAST of CmoCh09G009110 vs. NCBI nr
Match NameE-valueIdentityDescription
Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
CmoCh09G009110.1CmoCh09G009110.1mRNA