CmoCh09G008400 (gene) Cucurbita moschata (Rifu) v1

Overview


Name	CmoCh09G008400
Type	gene
Organism	Cucurbita moschata (Cucurbita moschata (Rifu) v1)
Description	ethylene-responsive transcription factor 4-like
Location	Cmo_Chr09: 4302114 .. 4302692 (+)
RNA-Seq Expression	CmoCh09G008400
Synteny	CmoCh09G008400

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDSpolypeptide

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGGCTGCCGGCGACCAGTCCACTTCCACCGCCTCCGCCGCTGAGGCGTCCAATTCCAAAGAGATCAGGTACAGGGGCGTCAGAAAGAGGCCGTGGGGCCGCTACGCAGCGGAAATCCGGGACCCTCGGAAAAAAACCAGGGTTTGGCTAGGAACAATCAACACGGCGGAGGAGGCGGCGCGTGCATATGATACGGCGGCGCGTGAATTTAGAGGCGCCGATGCCAAAACCAACTTCCCCGTTCCGAACGGTTTCTTAACCGTCGACAACAACAATAACTTCCGTAAATCCGCTTGTAGTAGTCCCAGCCAGTGTAGCACCGTCGAGTCCACTTCCCCGTCACCGGCGCCGTCGGATCCCACCATCACTGACGTCCACGCGCCGGCCATTTCCCGCCCAATTTTCTTCTTCGACGCGTTTGCCCAAGTGGAGAAGAACAGTGACTTTCGCCGGATAGTTACCGGTGCCGGCGGATCAAGAAGCGATTCCGATTCGTCATCCGTTGTCGATTTCGACAGGACGAGAAAATCTCGGCCGTTAGATTTTGACCTGAATCTTCCGGCTGTGGAAGTTGTTTGA

mRNA sequence

ATGGCTGCCGGCGACCAGTCCACTTCCACCGCCTCCGCCGCTGAGGCGTCCAATTCCAAAGAGATCAGGTACAGGGGCGTCAGAAAGAGGCCGTGGGGCCGCTACGCAGCGGAAATCCGGGACCCTCGGAAAAAAACCAGGGTTTGGCTAGGAACAATCAACACGGCGGAGGAGGCGGCGCGTGCATATGATACGGCGGCGCGTGAATTTAGAGGCGCCGATGCCAAAACCAACTTCCCCGTTCCGAACGGTTTCTTAACCGTCGACAACAACAATAACTTCCGTAAATCCGCTTGTAGTAGTCCCAGCCAGTGTAGCACCGTCGAGTCCACTTCCCCGTCACCGGCGCCGTCGGATCCCACCATCACTGACGTCCACGCGCCGGCCATTTCCCGCCCAATTTTCTTCTTCGACGCGTTTGCCCAAGTGGAGAAGAACAGTGACTTTCGCCGGATAGTTACCGGTGCCGGCGGATCAAGAAGCGATTCCGATTCGTCATCCGTTGTCGATTTCGACAGGACGAGAAAATCTCGGCCGTTAGATTTTGACCTGAATCTTCCGGCTGTGGAAGTTGTTTGA

Coding sequence (CDS)

ATGGCTGCCGGCGACCAGTCCACTTCCACCGCCTCCGCCGCTGAGGCGTCCAATTCCAAAGAGATCAGGTACAGGGGCGTCAGAAAGAGGCCGTGGGGCCGCTACGCAGCGGAAATCCGGGACCCTCGGAAAAAAACCAGGGTTTGGCTAGGAACAATCAACACGGCGGAGGAGGCGGCGCGTGCATATGATACGGCGGCGCGTGAATTTAGAGGCGCCGATGCCAAAACCAACTTCCCCGTTCCGAACGGTTTCTTAACCGTCGACAACAACAATAACTTCCGTAAATCCGCTTGTAGTAGTCCCAGCCAGTGTAGCACCGTCGAGTCCACTTCCCCGTCACCGGCGCCGTCGGATCCCACCATCACTGACGTCCACGCGCCGGCCATTTCCCGCCCAATTTTCTTCTTCGACGCGTTTGCCCAAGTGGAGAAGAACAGTGACTTTCGCCGGATAGTTACCGGTGCCGGCGGATCAAGAAGCGATTCCGATTCGTCATCCGTTGTCGATTTCGACAGGACGAGAAAATCTCGGCCGTTAGATTTTGACCTGAATCTTCCGGCTGTGGAAGTTGTTTGA

Protein sequence

MAAGDQSTSTASAAEASNSKEIRYRGVRKRPWGRYAAEIRDPRKKTRVWLGTINTAEEAARAYDTAAREFRGADAKTNFPVPNGFLTVDNNNNFRKSACSSPSQCSTVESTSPSPAPSDPTITDVHAPAISRPIFFFDAFAQVEKNSDFRRIVTGAGGSRSDSDSSSVVDFDRTRKSRPLDFDLNLPAVEVV

Homology

[Close]

BLAST of CmoCh09G008400 vs. ExPASy Swiss-Prot
Match: O80340 (Ethylene-responsive transcription factor 4 OS=Arabidopsis thaliana OX=3702 GN=ERF4 PE=1 SV=1)

HSP 1 Score: 146.0 bits (367), Expect = 4.5e-34
Identity = 101/204 (49.51%), Postives = 121/204 (59.31%), Query Frame = 0


Query: 17  SNSKEIRYRGVRKRPWGRYAAEIRDPRKKTRVWLGTINTAEEAARAYDTAAREFRGADAK 76
           +N+KEIRYRGVRKRPWGRYAAEIRDP KKTRVWLGT +TAEEAARAYDTAAR+FRGA AK
Sbjct: 18  NNAKEIRYRGVRKRPWGRYAAEIRDPGKKTRVWLGTFDTAEEAARAYDTAARDFRGAKAK 77

Query: 77  TNFPVPNGFLTVDNNNNFRKSACSSPSQCSTVESTSPSPAPSDPTITDVHAP-------- 136
           TNFP    FL + ++         SPSQ ST++  SP P    P+ T  + P        
Sbjct: 78  TNFPT---FLEL-SDQKVPTGFARSPSQSSTLDCASP-PTLVVPSATAGNVPPQLELSLG 137

Query: 137 ----------AISRPIFFFDAFA--------QVEKNSDFRRIVTG-----AGGSRSDSDS 188
                      +SRP++F D                S FR  V       A G++SDSDS
Sbjct: 138 GGGGGSCYQIPMSRPVYFLDLMGIGNVGRGQPPPVTSAFRSPVVHVATKMACGAQSDSDS 197

[Close]

BLAST of CmoCh09G008400 vs. ExPASy Swiss-Prot
Match: Q9MAI5 (Ethylene-responsive transcription factor 8 OS=Arabidopsis thaliana OX=3702 GN=ERF8 PE=1 SV=1)

HSP 1 Score: 119.4 bits (298), Expect = 4.5e-26
Identity = 86/187 (45.99%), Postives = 111/187 (59.36%), Query Frame = 0


Query: 15  EASNSKEIRYRGVRKRPWGRYAAEIRDPRKKTRVWLGTINTAEEAARAYDTAAREFRGAD 74
           E++ +KEIRYRGVRKRPWGRYAAEIRDP KKTRVWLGT +TA++AARAYD AAR+FRG  
Sbjct: 22  ESNAAKEIRYRGVRKRPWGRYAAEIRDPVKKTRVWLGTFDTAQQAARAYDAAARDFRGVK 81

Query: 75  AKTNFPVPNGFLTVDNNNNFRKSACSSPSQCSTVESTSPSPAPSDPTITDVHAP------ 134
           AKTNF V  G               SSP+Q STV   SP+ A     IT  H        
Sbjct: 82  AKTNFGVIVG---------------SSPTQSSTVVD-SPTAA---RFITPPHLELSLGGG 141

Query: 135 -------AISRPIFFFDAFAQVEKNSDFRRIVTGAGGSRSDSDSSSVVDFD--RTRKSRP 187
                   +  P+++++        + + ++ T   G +S+S++SSVVDF+    + S P
Sbjct: 142 GACRRKIPLVHPVYYYNM-------ATYPKMTT--CGVQSESETSSVVDFEGGAGKISPP 180

[Close]

BLAST of CmoCh09G008400 vs. ExPASy Swiss-Prot
Match: Q9SXS8 (Ethylene-responsive transcription factor 3 OS=Nicotiana tabacum OX=4097 GN=ERF3 PE=2 SV=1)

HSP 1 Score: 114.4 bits (285), Expect = 1.4e-24
Identity = 86/207 (41.55%), Postives = 109/207 (52.66%), Query Frame = 0


Query: 2   AAGDQSTSTASAAEASNSKEIRYRGVRKRPWGRYAAEIRDPRKKTRVWLGTINTAEEAAR 61
           AA   +  T     +  SKEIR+RGVRKRPWGR+AAEIRDP KKTRVWLGT ++AE+AAR
Sbjct: 6   AAAAPAPVTGEPNGSGGSKEIRFRGVRKRPWGRFAAEIRDPWKKTRVWLGTFDSAEDAAR 65

Query: 62  AYDTAAREFRGADAKTNFPV-------------PNGFLTVDN-----NNNFRKSACSSPS 121
           AYD AAR  RG  AKTNFP+             PN    VD+     +N       +S S
Sbjct: 66  AYDAAARALRGPKAKTNFPLPYAHHHQFNQGHNPNNDPFVDSRFYPQDNPIISQRPTSSS 125

Query: 122 QCSTVESTS---PSPAPSDPTITDVHAPAISRPIFFFDAFAQVEKNSDFRRIVTGAGGSR 181
             STVES S   P PAP   T         S P+   D  +  + +S    +  G     
Sbjct: 126 MSSTVESFSGPRPPPAPRQQTTASSRKYTRSPPVVPDDCHSDCDSSSSV--VDHGDCEKE 185

Query: 182 SDSDSSSVVDFDRTRKSRPLDFDLNLP 188
           +D+D+ ++     +   +PL FDLNLP
Sbjct: 186 NDNDNDNIAS---SSFRKPLLFDLNLP 207

[Close]

BLAST of CmoCh09G008400 vs. ExPASy Swiss-Prot
Match: Q40477 (Ethylene-responsive transcription factor 4 OS=Nicotiana tabacum OX=4097 GN=ERF4 PE=1 SV=1)

HSP 1 Score: 114.0 bits (284), Expect = 1.9e-24
Identity = 87/211 (41.23%), Postives = 106/211 (50.24%), Query Frame = 0


Query: 20  KEIRYRGVRKRPWGRYAAEIRDPRKKTRVWLGTINTAEEAARAYDTAAREFRGADAKTNF 79
           KE+ YRGVRKRPWGRYAAEIRDP KK+RVWLGT +TAEEAA+AYDTAAREFRG  AKTNF
Sbjct: 23  KEVHYRGVRKRPWGRYAAEIRDPGKKSRVWLGTFDTAEEAAKAYDTAAREFRGPKAKTNF 82

Query: 80  PVPNGFLTVDNNNNFRKSACSSPSQCSTVESTS-------PSPAPSDPTIT--------- 139
           P P              +   SPS  STVES+S       P  AP +  +T         
Sbjct: 83  PSP--------------TENQSPSHSSTVESSSGENGVHAPPHAPLELDLTRRLGSVAAD 142

Query: 140 ---------DVHAPAI-----------SRPIFFFDAF---AQVEKNSDFRRIVTG----- 187
                    +V  P              +P+  FD+      V +   +     G     
Sbjct: 143 GGDNCRRSGEVGYPIFHQQPTVAVLPNGQPVLLFDSLWRAGVVNRPQPYHVTPMGFNGVN 202

[Close]

BLAST of CmoCh09G008400 vs. ExPASy Swiss-Prot
Match: Q9FE67 (Ethylene-responsive transcription factor 9 OS=Arabidopsis thaliana OX=3702 GN=ERF9 PE=1 SV=1)

HSP 1 Score: 113.6 bits (283), Expect = 2.5e-24
Identity = 78/177 (44.07%), Postives = 99/177 (55.93%), Query Frame = 0


Query: 20  KEIRYRGVRKRPWGRYAAEIRDPRKKTRVWLGTINTAEEAARAYDTAAREFRGADAKTNF 79
           KE+ +RGVRKRPWGRYAAEIRDP KKTRVWLGT +TAEEAARAYDTAAREFRG+ AKTNF
Sbjct: 29  KEVHFRGVRKRPWGRYAAEIRDPGKKTRVWLGTFDTAEEAARAYDTAAREFRGSKAKTNF 88

Query: 80  PVPNGFLTVDNNNNFRKSACSSPSQCSTVESTS---PSPAPSDPTITDVHAPAISRPIFF 139
           P+P    TV N+     S  +  +  +  E T    P     +  +   +A A     FF
Sbjct: 89  PLPGESTTV-NDGGENDSYVNRTTVTTAREMTRQRFPFACHRERKVVGGYASA----GFF 148

Query: 140 FDAFAQVEKNSDFRRIVTGAGGSRSDSDSSSVVDFDRTRKSRPLDFDLNL--PAVEV 192
           FD        ++  R+        +   S  + +  +    R L+ DLNL  P V+V
Sbjct: 149 FDPSRAASLRAELSRVCPVRFDPVNIELSIGIRETVKVEPRRELNLDLNLAPPVVDV 200

[Close]

BLAST of CmoCh09G008400 vs. ExPASy TrEMBL
Match: A0A6J1F5I9 (ethylene-responsive transcription factor 4-like OS=Cucurbita moschata OX=3662 GN=LOC111442554 PE=4 SV=1)

HSP 1 Score: 371.7 bits (953), Expect = 1.8e-99
Identity = 192/192 (100.00%), Postives = 192/192 (100.00%), Query Frame = 0


Query: 1   MAAGDQSTSTASAAEASNSKEIRYRGVRKRPWGRYAAEIRDPRKKTRVWLGTINTAEEAA 60
           MAAGDQSTSTASAAEASNSKEIRYRGVRKRPWGRYAAEIRDPRKKTRVWLGTINTAEEAA
Sbjct: 1   MAAGDQSTSTASAAEASNSKEIRYRGVRKRPWGRYAAEIRDPRKKTRVWLGTINTAEEAA 60

Query: 61  RAYDTAAREFRGADAKTNFPVPNGFLTVDNNNNFRKSACSSPSQCSTVESTSPSPAPSDP 120
           RAYDTAAREFRGADAKTNFPVPNGFLTVDNNNNFRKSACSSPSQCSTVESTSPSPAPSDP
Sbjct: 61  RAYDTAAREFRGADAKTNFPVPNGFLTVDNNNNFRKSACSSPSQCSTVESTSPSPAPSDP 120

Query: 121 TITDVHAPAISRPIFFFDAFAQVEKNSDFRRIVTGAGGSRSDSDSSSVVDFDRTRKSRPL 180
           TITDVHAPAISRPIFFFDAFAQVEKNSDFRRIVTGAGGSRSDSDSSSVVDFDRTRKSRPL
Sbjct: 121 TITDVHAPAISRPIFFFDAFAQVEKNSDFRRIVTGAGGSRSDSDSSSVVDFDRTRKSRPL 180

Query: 181 DFDLNLPAVEVV 193
           DFDLNLPAVEVV
Sbjct: 181 DFDLNLPAVEVV 192

[Close]

BLAST of CmoCh09G008400 vs. ExPASy TrEMBL
Match: A0A6J1IML9 (ethylene-responsive transcription factor 4-like OS=Cucurbita maxima OX=3661 GN=LOC111476936 PE=4 SV=1)

HSP 1 Score: 328.9 bits (842), Expect = 1.4e-86
Identity = 171/192 (89.06%), Postives = 179/192 (93.23%), Query Frame = 0


Query: 1   MAAGDQSTSTASAAEASNSKEIRYRGVRKRPWGRYAAEIRDPRKKTRVWLGTINTAEEAA 60
           MAA D+STST SAA ASNS+EIRYRGVRKRPWGRYAAEIRDPRKKTRVWLGT NTAEEAA
Sbjct: 1   MAANDRSTSTVSAAVASNSEEIRYRGVRKRPWGRYAAEIRDPRKKTRVWLGTFNTAEEAA 60

Query: 61  RAYDTAAREFRGADAKTNFPVPNGFLTVDNNNNFRKSACSSPSQCSTVESTSPSPAPSDP 120
           RAYDTAAREFRGADAKTNFPVPN F  +D NNNFRKSACS+PSQCSTVES+SPSPAP DP
Sbjct: 61  RAYDTAAREFRGADAKTNFPVPNDFQIIDINNNFRKSACSNPSQCSTVESSSPSPAPLDP 120

Query: 121 TITDVHAPAISRPIFFFDAFAQVEKNSDFRRIVTGAGGSRSDSDSSSVVDFDRTRKSRPL 180
            +T VHAP+ISRPIFFFDAFAQVEKNSDFRRIV+ AG SRSDSDSSSVVDFDRTRKSRPL
Sbjct: 121 ALTYVHAPSISRPIFFFDAFAQVEKNSDFRRIVSVAGRSRSDSDSSSVVDFDRTRKSRPL 180

Query: 181 DFDLNLPAVEVV 193
           DFDLNLPAVEVV
Sbjct: 181 DFDLNLPAVEVV 192

[Close]

BLAST of CmoCh09G008400 vs. ExPASy TrEMBL
Match: A0A5A7VEL4 (Ethylene-responsive transcription factor 4 OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold384G001630 PE=4 SV=1)

HSP 1 Score: 282.3 bits (721), Expect = 1.5e-72
Identity = 157/195 (80.51%), Postives = 164/195 (84.10%), Query Frame = 0


Query: 1   MAAGDQSTSTASAAEASNSKEIRYRGVRKRPWGRYAAEIRDPRKKTRVWLGTINTAEEAA 60
           MAAGD+STS A      NSKEIRYRGVRKRPWGRYAAEIRDPRKKTRVWLGT NTAEEAA
Sbjct: 1   MAAGDRSTSAA----PPNSKEIRYRGVRKRPWGRYAAEIRDPRKKTRVWLGTFNTAEEAA 60

Query: 61  RAYDTAAREFRGADAKTNFPVPNGFLTVDNNN-NFRKSAC-SSPSQCSTVESTSPSPAPS 120
           RAYDTAAREFRGA+AKTNFPV N FL VDNN+ NF KSAC SSPS  STVES+SPSP PS
Sbjct: 61  RAYDTAAREFRGANAKTNFPVQNDFLIVDNNHTNFHKSACSSSPSHSSTVESSSPSPTPS 120

Query: 121 DPTIT-DVHAPAISRPIFFFDAFAQVEKNSDFRRIVTGAGGSRSDSDSSSVVDFDRTRKS 180
           +P +   +HAP ISRPIFFFDAFAQ EK SDFRR VT A    SDSDSSSVVDFD TRKS
Sbjct: 121 NPYLDGGIHAPGISRPIFFFDAFAQAEKISDFRRTVTAAAAGASDSDSSSVVDFDTTRKS 180

Query: 181 RPLDFDLNLPAVEVV 193
           RPLDFDLNLPAVEVV
Sbjct: 181 RPLDFDLNLPAVEVV 191

[Close]

BLAST of CmoCh09G008400 vs. ExPASy TrEMBL
Match: A0A1S3CLM9 (ethylene-responsive transcription factor 4 OS=Cucumis melo OX=3656 GN=LOC103501853 PE=4 SV=1)

HSP 1 Score: 282.3 bits (721), Expect = 1.5e-72
Identity = 157/195 (80.51%), Postives = 164/195 (84.10%), Query Frame = 0


Query: 1   MAAGDQSTSTASAAEASNSKEIRYRGVRKRPWGRYAAEIRDPRKKTRVWLGTINTAEEAA 60
           MAAGD+STS A      NSKEIRYRGVRKRPWGRYAAEIRDPRKKTRVWLGT NTAEEAA
Sbjct: 1   MAAGDRSTSAA----PPNSKEIRYRGVRKRPWGRYAAEIRDPRKKTRVWLGTFNTAEEAA 60

Query: 61  RAYDTAAREFRGADAKTNFPVPNGFLTVDNNN-NFRKSAC-SSPSQCSTVESTSPSPAPS 120
           RAYDTAAREFRGA+AKTNFPV N FL VDNN+ NF KSAC SSPS  STVES+SPSP PS
Sbjct: 61  RAYDTAAREFRGANAKTNFPVQNDFLIVDNNHTNFHKSACSSSPSHSSTVESSSPSPTPS 120

Query: 121 DPTIT-DVHAPAISRPIFFFDAFAQVEKNSDFRRIVTGAGGSRSDSDSSSVVDFDRTRKS 180
           +P +   +HAP ISRPIFFFDAFAQ EK SDFRR VT A    SDSDSSSVVDFD TRKS
Sbjct: 121 NPYLDGGIHAPGISRPIFFFDAFAQAEKISDFRRTVTAAAAGASDSDSSSVVDFDTTRKS 180

Query: 181 RPLDFDLNLPAVEVV 193
           RPLDFDLNLPAVEVV
Sbjct: 181 RPLDFDLNLPAVEVV 191

[Close]

BLAST of CmoCh09G008400 vs. ExPASy TrEMBL
Match: A0A0A0L4P1 (Ethylene response factor 2 OS=Cucumis sativus OX=3659 GN=Csa_4G630010 PE=4 SV=1)

HSP 1 Score: 268.9 bits (686), Expect = 1.7e-68
Identity = 153/197 (77.66%), Postives = 159/197 (80.71%), Query Frame = 0


Query: 1   MAAGDQSTSTASAAEASNSKEIRYRGVRKRPWGRYAAEIRDPRKKTRVWLGTINTAEEAA 60
           MAAGD+STST        SKEIRYRGVRKRPWGRYAAEIRDPRKKTRVWLGT NTAEEAA
Sbjct: 1   MAAGDRSTSTT----PPTSKEIRYRGVRKRPWGRYAAEIRDPRKKTRVWLGTFNTAEEAA 60

Query: 61  RAYDTAAREFRGADAKTNFPVPNGFLTVDNNN--NFRKSACS-SPSQCSTVESTSPSPAP 120
           RAYD AAREFRGA+AKTNFP+   FL VDNNN  NF KSACS SPS  STVES+SPSP P
Sbjct: 61  RAYDAAAREFRGANAKTNFPLQTDFLIVDNNNHSNFHKSACSTSPSHSSTVESSSPSPTP 120

Query: 121 SDPTIT-DVHAPAISRPIFFFDAFAQVEKN-SDFRRIVTGAGGSRSDSDSSSVVDFDRTR 180
           SDP +   +H P IS PIFFFDAFAQ EKN SDFRR VT A    SDSDSSSV DFD TR
Sbjct: 121 SDPYLDGGIHPPGISPPIFFFDAFAQAEKNISDFRRTVTAAVAGASDSDSSSVGDFDTTR 180

Query: 181 KSRPLDFDLNLPAVEVV 193
           KSRPLDFDLNLPAVEVV
Sbjct: 181 KSRPLDFDLNLPAVEVV 193

[Close]

BLAST of CmoCh09G008400 vs. NCBI nr
Match: XP_022935731.1 (ethylene-responsive transcription factor 4-like [Cucurbita moschata])

HSP 1 Score: 371.7 bits (953), Expect = 3.8e-99
Identity = 192/192 (100.00%), Postives = 192/192 (100.00%), Query Frame = 0


Query: 1   MAAGDQSTSTASAAEASNSKEIRYRGVRKRPWGRYAAEIRDPRKKTRVWLGTINTAEEAA 60
           MAAGDQSTSTASAAEASNSKEIRYRGVRKRPWGRYAAEIRDPRKKTRVWLGTINTAEEAA
Sbjct: 1   MAAGDQSTSTASAAEASNSKEIRYRGVRKRPWGRYAAEIRDPRKKTRVWLGTINTAEEAA 60

Query: 61  RAYDTAAREFRGADAKTNFPVPNGFLTVDNNNNFRKSACSSPSQCSTVESTSPSPAPSDP 120
           RAYDTAAREFRGADAKTNFPVPNGFLTVDNNNNFRKSACSSPSQCSTVESTSPSPAPSDP
Sbjct: 61  RAYDTAAREFRGADAKTNFPVPNGFLTVDNNNNFRKSACSSPSQCSTVESTSPSPAPSDP 120

Query: 121 TITDVHAPAISRPIFFFDAFAQVEKNSDFRRIVTGAGGSRSDSDSSSVVDFDRTRKSRPL 180
           TITDVHAPAISRPIFFFDAFAQVEKNSDFRRIVTGAGGSRSDSDSSSVVDFDRTRKSRPL
Sbjct: 121 TITDVHAPAISRPIFFFDAFAQVEKNSDFRRIVTGAGGSRSDSDSSSVVDFDRTRKSRPL 180

Query: 181 DFDLNLPAVEVV 193
           DFDLNLPAVEVV
Sbjct: 181 DFDLNLPAVEVV 192

[Close]

BLAST of CmoCh09G008400 vs. NCBI nr
Match: KAG7024813.1 (Ethylene-responsive transcription factor 4, partial [Cucurbita argyrosperma subsp. argyrosperma])

HSP 1 Score: 363.2 bits (931), Expect = 1.4e-96
Identity = 187/192 (97.40%), Postives = 189/192 (98.44%), Query Frame = 0


Query: 1   MAAGDQSTSTASAAEASNSKEIRYRGVRKRPWGRYAAEIRDPRKKTRVWLGTINTAEEAA 60
           MA+GDQSTSTASAA ASNSKEIRYRGVRKRPWGRYAAEIRDPRKKTRVWLGT NTAEEAA
Sbjct: 1   MASGDQSTSTASAAVASNSKEIRYRGVRKRPWGRYAAEIRDPRKKTRVWLGTFNTAEEAA 60

Query: 61  RAYDTAAREFRGADAKTNFPVPNGFLTVDNNNNFRKSACSSPSQCSTVESTSPSPAPSDP 120
           RAYDTAAREFRGADAKTNFPVPNGFLTVDNNNNFRKSAC+SPSQCSTVESTSPSPAPSDP
Sbjct: 61  RAYDTAAREFRGADAKTNFPVPNGFLTVDNNNNFRKSACNSPSQCSTVESTSPSPAPSDP 120

Query: 121 TITDVHAPAISRPIFFFDAFAQVEKNSDFRRIVTGAGGSRSDSDSSSVVDFDRTRKSRPL 180
            ITDVHAPAISRPIFFFDAFAQVEKNSDFRRIVTGAGGSRSDSDSSSVVDFDRTRKSRPL
Sbjct: 121 AITDVHAPAISRPIFFFDAFAQVEKNSDFRRIVTGAGGSRSDSDSSSVVDFDRTRKSRPL 180

Query: 181 DFDLNLPAVEVV 193
           DFDLNLPAVEVV
Sbjct: 181 DFDLNLPAVEVV 192

[Close]

BLAST of CmoCh09G008400 vs. NCBI nr
Match: KAG6591940.1 (Ethylene-responsive transcription factor 4, partial [Cucurbita argyrosperma subsp. sororia])

HSP 1 Score: 360.5 bits (924), Expect = 8.8e-96
Identity = 186/192 (96.88%), Postives = 187/192 (97.40%), Query Frame = 0


Query: 1   MAAGDQSTSTASAAEASNSKEIRYRGVRKRPWGRYAAEIRDPRKKTRVWLGTINTAEEAA 60
           MA+GDQSTSTASAA ASNSKEIRYRGVRKRPWGRYAAEIRDPRKKTRVWLGT NTAEEAA
Sbjct: 1   MASGDQSTSTASAAVASNSKEIRYRGVRKRPWGRYAAEIRDPRKKTRVWLGTFNTAEEAA 60

Query: 61  RAYDTAAREFRGADAKTNFPVPNGFLTVDNNNNFRKSACSSPSQCSTVESTSPSPAPSDP 120
           RAYDTAAREFRG DAKTNFPVPNGFLTVDNNNNFRKSACSSPSQCSTVESTSPSPAPSDP
Sbjct: 61  RAYDTAAREFRGTDAKTNFPVPNGFLTVDNNNNFRKSACSSPSQCSTVESTSPSPAPSDP 120

Query: 121 TITDVHAPAISRPIFFFDAFAQVEKNSDFRRIVTGAGGSRSDSDSSSVVDFDRTRKSRPL 180
            ITDVHAPAISRPIFFFDAFAQVEKNSDFRRIV GAGGSRSDSDSSSVVDFDRTRKSRPL
Sbjct: 121 AITDVHAPAISRPIFFFDAFAQVEKNSDFRRIVIGAGGSRSDSDSSSVVDFDRTRKSRPL 180

Query: 181 DFDLNLPAVEVV 193
           DFDLNLPAVEVV
Sbjct: 181 DFDLNLPAVEVV 192

[Close]

BLAST of CmoCh09G008400 vs. NCBI nr
Match: XP_023536061.1 (ethylene-responsive transcription factor 4-like [Cucurbita pepo subsp. pepo])

HSP 1 Score: 354.4 bits (908), Expect = 6.3e-94
Identity = 184/192 (95.83%), Postives = 187/192 (97.40%), Query Frame = 0


Query: 1   MAAGDQSTSTASAAEASNSKEIRYRGVRKRPWGRYAAEIRDPRKKTRVWLGTINTAEEAA 60
           MAAGD+STSTASAA ASNSKEIRYRGVRKRPWGRYAAEIRDPRKKTRVWLGT NTAEEAA
Sbjct: 1   MAAGDKSTSTASAAVASNSKEIRYRGVRKRPWGRYAAEIRDPRKKTRVWLGTFNTAEEAA 60

Query: 61  RAYDTAAREFRGADAKTNFPVPNGFLTVDNNNNFRKSACSSPSQCSTVESTSPSPAPSDP 120
           RAYDTAAREFRGADAKTNFPVPNGFLTVDNNNNFRKSACSSPSQ STVES+SPSPAPSDP
Sbjct: 61  RAYDTAAREFRGADAKTNFPVPNGFLTVDNNNNFRKSACSSPSQSSTVESSSPSPAPSDP 120

Query: 121 TITDVHAPAISRPIFFFDAFAQVEKNSDFRRIVTGAGGSRSDSDSSSVVDFDRTRKSRPL 180
            IT VHAPAISRPIFFF+AFAQVEKNSDFRRIVTGAGGSRSDSDSSSVVDFDRTRKSRPL
Sbjct: 121 AITHVHAPAISRPIFFFEAFAQVEKNSDFRRIVTGAGGSRSDSDSSSVVDFDRTRKSRPL 180

Query: 181 DFDLNLPAVEVV 193
           DFDLNLPAVEVV
Sbjct: 181 DFDLNLPAVEVV 192

[Close]

BLAST of CmoCh09G008400 vs. NCBI nr
Match: XP_022976583.1 (ethylene-responsive transcription factor 4-like [Cucurbita maxima])

HSP 1 Score: 328.9 bits (842), Expect = 2.8e-86
Identity = 171/192 (89.06%), Postives = 179/192 (93.23%), Query Frame = 0


Query: 1   MAAGDQSTSTASAAEASNSKEIRYRGVRKRPWGRYAAEIRDPRKKTRVWLGTINTAEEAA 60
           MAA D+STST SAA ASNS+EIRYRGVRKRPWGRYAAEIRDPRKKTRVWLGT NTAEEAA
Sbjct: 1   MAANDRSTSTVSAAVASNSEEIRYRGVRKRPWGRYAAEIRDPRKKTRVWLGTFNTAEEAA 60

Query: 61  RAYDTAAREFRGADAKTNFPVPNGFLTVDNNNNFRKSACSSPSQCSTVESTSPSPAPSDP 120
           RAYDTAAREFRGADAKTNFPVPN F  +D NNNFRKSACS+PSQCSTVES+SPSPAP DP
Sbjct: 61  RAYDTAAREFRGADAKTNFPVPNDFQIIDINNNFRKSACSNPSQCSTVESSSPSPAPLDP 120

Query: 121 TITDVHAPAISRPIFFFDAFAQVEKNSDFRRIVTGAGGSRSDSDSSSVVDFDRTRKSRPL 180
            +T VHAP+ISRPIFFFDAFAQVEKNSDFRRIV+ AG SRSDSDSSSVVDFDRTRKSRPL
Sbjct: 121 ALTYVHAPSISRPIFFFDAFAQVEKNSDFRRIVSVAGRSRSDSDSSSVVDFDRTRKSRPL 180

Query: 181 DFDLNLPAVEVV 193
           DFDLNLPAVEVV
Sbjct: 181 DFDLNLPAVEVV 192

[Close]

BLAST of CmoCh09G008400 vs. TAIR 10
Match: AT3G15210.1 (ethylene responsive element binding factor 4 )

HSP 1 Score: 146.0 bits (367), Expect = 3.2e-35
Identity = 101/204 (49.51%), Postives = 121/204 (59.31%), Query Frame = 0


Query: 17  SNSKEIRYRGVRKRPWGRYAAEIRDPRKKTRVWLGTINTAEEAARAYDTAAREFRGADAK 76
           +N+KEIRYRGVRKRPWGRYAAEIRDP KKTRVWLGT +TAEEAARAYDTAAR+FRGA AK
Sbjct: 18  NNAKEIRYRGVRKRPWGRYAAEIRDPGKKTRVWLGTFDTAEEAARAYDTAARDFRGAKAK 77

Query: 77  TNFPVPNGFLTVDNNNNFRKSACSSPSQCSTVESTSPSPAPSDPTITDVHAP-------- 136
           TNFP    FL + ++         SPSQ ST++  SP P    P+ T  + P        
Sbjct: 78  TNFPT---FLEL-SDQKVPTGFARSPSQSSTLDCASP-PTLVVPSATAGNVPPQLELSLG 137

Query: 137 ----------AISRPIFFFDAFA--------QVEKNSDFRRIVTG-----AGGSRSDSDS 188
                      +SRP++F D                S FR  V       A G++SDSDS
Sbjct: 138 GGGGGSCYQIPMSRPVYFLDLMGIGNVGRGQPPPVTSAFRSPVVHVATKMACGAQSDSDS 197

[Close]

BLAST of CmoCh09G008400 vs. TAIR 10
Match: AT1G53170.1 (ethylene response factor 8 )

HSP 1 Score: 119.4 bits (298), Expect = 3.2e-27
Identity = 86/187 (45.99%), Postives = 111/187 (59.36%), Query Frame = 0


Query: 15  EASNSKEIRYRGVRKRPWGRYAAEIRDPRKKTRVWLGTINTAEEAARAYDTAAREFRGAD 74
           E++ +KEIRYRGVRKRPWGRYAAEIRDP KKTRVWLGT +TA++AARAYD AAR+FRG  
Sbjct: 22  ESNAAKEIRYRGVRKRPWGRYAAEIRDPVKKTRVWLGTFDTAQQAARAYDAAARDFRGVK 81

Query: 75  AKTNFPVPNGFLTVDNNNNFRKSACSSPSQCSTVESTSPSPAPSDPTITDVHAP------ 134
           AKTNF V  G               SSP+Q STV   SP+ A     IT  H        
Sbjct: 82  AKTNFGVIVG---------------SSPTQSSTVVD-SPTAA---RFITPPHLELSLGGG 141

Query: 135 -------AISRPIFFFDAFAQVEKNSDFRRIVTGAGGSRSDSDSSSVVDFD--RTRKSRP 187
                   +  P+++++        + + ++ T   G +S+S++SSVVDF+    + S P
Sbjct: 142 GACRRKIPLVHPVYYYNM-------ATYPKMTT--CGVQSESETSSVVDFEGGAGKISPP 180

[Close]

BLAST of CmoCh09G008400 vs. TAIR 10
Match: AT5G44210.1 (erf domain protein 9 )

HSP 1 Score: 113.6 bits (283), Expect = 1.7e-25
Identity = 78/177 (44.07%), Postives = 99/177 (55.93%), Query Frame = 0


Query: 20  KEIRYRGVRKRPWGRYAAEIRDPRKKTRVWLGTINTAEEAARAYDTAAREFRGADAKTNF 79
           KE+ +RGVRKRPWGRYAAEIRDP KKTRVWLGT +TAEEAARAYDTAAREFRG+ AKTNF
Sbjct: 29  KEVHFRGVRKRPWGRYAAEIRDPGKKTRVWLGTFDTAEEAARAYDTAAREFRGSKAKTNF 88

Query: 80  PVPNGFLTVDNNNNFRKSACSSPSQCSTVESTS---PSPAPSDPTITDVHAPAISRPIFF 139
           P+P    TV N+     S  +  +  +  E T    P     +  +   +A A     FF
Sbjct: 89  PLPGESTTV-NDGGENDSYVNRTTVTTAREMTRQRFPFACHRERKVVGGYASA----GFF 148

Query: 140 FDAFAQVEKNSDFRRIVTGAGGSRSDSDSSSVVDFDRTRKSRPLDFDLNL--PAVEV 192
           FD        ++  R+        +   S  + +  +    R L+ DLNL  P V+V
Sbjct: 149 FDPSRAASLRAELSRVCPVRFDPVNIELSIGIRETVKVEPRRELNLDLNLAPPVVDV 200

[Close]

BLAST of CmoCh09G008400 vs. TAIR 10
Match: AT1G28370.1 (ERF domain protein 11 )

HSP 1 Score: 109.8 bits (273), Expect = 2.5e-24
Identity = 88/187 (47.06%), Postives = 98/187 (52.41%), Query Frame = 0


Query: 8   TSTASAAEASNSKEIRYRGVRKRPWGRYAAEIRDPRKKTRVWLGTINTAEEAARAYDTAA 67
           T   +A + +    +RYRGVRKRPWGRYAAEIRDP KK+RVWLGT +T EEAARAYD  A
Sbjct: 4   TVKTAAVKTNEGNGVRYRGVRKRPWGRYAAEIRDPFKKSRVWLGTFDTPEEAARAYDKRA 63

Query: 68  REFRGADAKTNFPVPNGFLTVDNNNNFRKSACSSPSQCSTVESTSPS-PAPSDPTITDVH 127
            EFRGA AKTNFP         N N    S   S SQ STVES+ P+    SD       
Sbjct: 64  IEFRGAKAKTNFP-------CYNINAHCLSLTQSLSQSSTVESSFPNLNLGSD------- 123

Query: 128 APAISRPIFFFDAFAQVEKNSDFRRIVTGAG----GSRSDSDSSSVV-DFDRTRKSR-PL 187
                           V     F +I   AG      RS+SDSSSVV D  R    R  L
Sbjct: 124 ---------------SVSSRFPFPKIQVKAGMMVFDERSESDSSSVVMDVVRYEGRRVVL 161

[Close]

BLAST of CmoCh09G008400 vs. TAIR 10
Match: AT1G50640.1 (ethylene responsive element binding factor 3 )

HSP 1 Score: 103.6 bits (257), Expect = 1.8e-22
Identity = 82/211 (38.86%), Postives = 104/211 (49.29%), Query Frame = 0


Query: 10  TASAAEASNSKEIRYRGVRKRPWGRYAAEIRDPRKKTRVWLGTINTAEEAARAYDTAARE 69
           T  AA   + KEIR+RGVRKRPWGR+AAEIRDP KK RVWLGT ++AEEAARAYD+AAR 
Sbjct: 14  TVVAAINGSVKEIRFRGVRKRPWGRFAAEIRDPWKKARVWLGTFDSAEEAARAYDSAARN 73

Query: 70  FRGADAKTNFPV-------PN-GFLTVDNNNNFR-------------------KSACSSP 129
            RG  AKTNFP+       PN  F  + N N  +                    +  +S 
Sbjct: 74  LRGPKAKTNFPIDSSSPPPPNLRFNQIRNQNQNQVDPFMDHRLFTDHQQQFPIVNRPTSS 133

Query: 130 SQCSTVESTS-PSPAPSDPTITDVHAPAISRPIFFFDAFAQVEKNSDFRRIVTGAGGSRS 189
           S  STVES S P P    P  T  +    + P+   D  +  + +S             S
Sbjct: 134 SMSSTVESFSGPRPTTMKPATTKRYPR--TPPVVPEDCHSDCDSSS-------------S 193

Query: 190 DSDSSSVVDFDRTRKSRPLDFDLNLPAVEVV 193
             D    +     R++ P  FDLN P ++ V
Sbjct: 194 VIDDDDDIASSSRRRNPPFQFDLNFPPLDCV 209

The following BLAST results are available for this feature:

BLAST of CmoCh09G008400 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
O80340	4.5e-34	49.51	Ethylene-responsive transcription factor 4 OS=Arabidopsis thaliana OX=3702 GN=ER...	[more]
Q9MAI5	4.5e-26	45.99	Ethylene-responsive transcription factor 8 OS=Arabidopsis thaliana OX=3702 GN=ER...	[more]
Q9SXS8	1.4e-24	41.55	Ethylene-responsive transcription factor 3 OS=Nicotiana tabacum OX=4097 GN=ERF3 ...	[more]
Q40477	1.9e-24	41.23	Ethylene-responsive transcription factor 4 OS=Nicotiana tabacum OX=4097 GN=ERF4 ...	[more]
Q9FE67	2.5e-24	44.07	Ethylene-responsive transcription factor 9 OS=Arabidopsis thaliana OX=3702 GN=ER...	[more]

BLAST of CmoCh09G008400 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A6J1F5I9	1.8e-99	100.00	ethylene-responsive transcription factor 4-like OS=Cucurbita moschata OX=3662 GN...	[more]
A0A6J1IML9	1.4e-86	89.06	ethylene-responsive transcription factor 4-like OS=Cucurbita maxima OX=3661 GN=L...	[more]
A0A5A7VEL4	1.5e-72	80.51	Ethylene-responsive transcription factor 4 OS=Cucumis melo var. makuwa OX=119469...	[more]
A0A1S3CLM9	1.5e-72	80.51	ethylene-responsive transcription factor 4 OS=Cucumis melo OX=3656 GN=LOC1035018...	[more]
A0A0A0L4P1	1.7e-68	77.66	Ethylene response factor 2 OS=Cucumis sativus OX=3659 GN=Csa_4G630010 PE=4 SV=1	[more]

BLAST of CmoCh09G008400 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_022935731.1	3.8e-99	100.00	ethylene-responsive transcription factor 4-like [Cucurbita moschata]	[more]
KAG7024813.1	1.4e-96	97.40	Ethylene-responsive transcription factor 4, partial [Cucurbita argyrosperma subs...	[more]
KAG6591940.1	8.8e-96	96.88	Ethylene-responsive transcription factor 4, partial [Cucurbita argyrosperma subs...	[more]
XP_023536061.1	6.3e-94	95.83	ethylene-responsive transcription factor 4-like [Cucurbita pepo subsp. pepo]	[more]
XP_022976583.1	2.8e-86	89.06	ethylene-responsive transcription factor 4-like [Cucurbita maxima]	[more]

BLAST of CmoCh09G008400 vs. TAIR 10


Match Name	E-value	Identity	Description
AT3G15210.1	3.2e-35	49.51	ethylene responsive element binding factor 4	[more]
AT1G53170.1	3.2e-27	45.99	ethylene response factor 8	[more]
AT5G44210.1	1.7e-25	44.07	erf domain protein 9	[more]
AT1G28370.1	2.5e-24	47.06	ERF domain protein 11	[more]
AT1G50640.1	1.8e-22	38.86	ethylene responsive element binding factor 3	[more]

InterPro

Analysis Name: InterPro Annotations of Cucurbita moschata (Rifu) v1
Date Performed: 2021-10-25

Position :

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IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR001471	AP2/ERF domain	PRINTS	PR00367	ETHRSPELEMNT	coord: 24..35 score: 66.67 coord: 46..62 score: 69.73
IPR001471	AP2/ERF domain	SMART	SM00380	rav1_2	coord: 23..86 e-value: 3.0E-34 score: 129.8
IPR001471	AP2/ERF domain	PFAM	PF00847	AP2	coord: 23..72 e-value: 4.6E-12 score: 46.0
IPR001471	AP2/ERF domain	PROSITE	PS51032	AP2_ERF	coord: 23..80 score: 23.933432
IPR001471	AP2/ERF domain	CDD	cd00018	AP2	coord: 23..81 e-value: 3.62805E-30 score: 103.505
IPR036955	AP2/ERF domain superfamily	GENE3D	3.30.730.10	AP2/ERF domain	coord: 22..81 e-value: 7.9E-27 score: 95.2
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 1..17
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 1..22
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 96..119
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 96..124
None	No IPR available	PANTHER	PTHR31677	AP2 DOMAIN CLASS TRANSCRIPTION FACTOR	coord: 7..117
None	No IPR available	PANTHER	PTHR31677	AP2 DOMAIN CLASS TRANSCRIPTION FACTOR	coord: 127..181
None	No IPR available	PANTHER	PTHR31677:SF156	ERF FAMILY PROTEIN	coord: 127..181
None	No IPR available	PANTHER	PTHR31677:SF156	ERF FAMILY PROTEIN	coord: 7..117
IPR016177	DNA-binding domain superfamily	SUPERFAMILY	54171	DNA-binding domain	coord: 23..81

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
CmoCh09G008400.1	CmoCh09G008400.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0006355	regulation of transcription, DNA-templated
cellular_component	GO:0005634	nucleus
molecular_function	GO:0003677	DNA binding
molecular_function	GO:0003700	DNA-binding transcription factor activity