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Sequences
The following sequences are available for this feature:
Gene sequence (with intron) Legend: exonCDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below. ATGTTCTTGTGTTCTTCCTCCATTTGTGAGAGTCGCTTGCTTTCTTCTTCTTCTTCTTCCTCTTCTTTGGCGAATACGAAGAACGAGATCTTTGTAAAGAACGTCAAAGAACTCTTGAAGGTTATCGTTGAAGAAAAAGAGAAGCTTGGACGACATTTCGTGTCCAAAAGACTCAGCCCTGGAGGACCTGATCCACGCCATCATTGA mRNA sequence ATGTTCTTGTGTTCTTCCTCCATTTGTGAGAGTCGCTTGCTTTCTTCTTCTTCTTCTTCCTCTTCTTTGGCGAATACGAAGAACGAGATCTTTGTAAAGAACGTCAAAGAACTCTTGAAGGTTATCGTTGAAGAAAAAGAGAAGCTTGGACGACATTTCGTGTCCAAAAGACTCAGCCCTGGAGGACCTGATCCACGCCATCATTGA Coding sequence (CDS) ATGTTCTTGTGTTCTTCCTCCATTTGTGAGAGTCGCTTGCTTTCTTCTTCTTCTTCTTCCTCTTCTTTGGCGAATACGAAGAACGAGATCTTTGTAAAGAACGTCAAAGAACTCTTGAAGGTTATCGTTGAAGAAAAAGAGAAGCTTGGACGACATTTCGTGTCCAAAAGACTCAGCCCTGGAGGACCTGATCCACGCCATCATTGA Protein sequence MFLCSSSICESRLLSSSSSSSSLANTKNEIFVKNVKELLKVIVEEKEKLGRHFVSKRLSPGGPDPRHH
Homology
BLAST of CmoCh09G008200 vs. ExPASy TrEMBL
Match: A0A0A0L4M1 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_4G627800 PE=4 SV=1) HSP 1 Score: 92.8 bits (229), Expect = 5.9e-16 Identity = 52/71 (73.24%), Postives = 58/71 (81.69%), Query Frame = 0
Query: 1 MFLCSSSICESRLLSS---SSSSSSLANTKNEIFVKNVKELLKVIVEEKEKLGRHFVSKR 60
+ L SSI ESRLLSS S S SS +N KNE+FVKN +E+LK I+EEKEKLGRHFVSKR
Sbjct: 17 ILLLCSSISESRLLSSPSQSQSPSSSSNKKNELFVKNAEEMLKFIIEEKEKLGRHFVSKR 76
Query: 61 LSPGGPDPRHH 69
LSPGGPDPRHH
Sbjct: 77 LSPGGPDPRHH 87
BLAST of CmoCh09G008200 vs. NCBI nr
Match: KGN55081.1 (hypothetical protein Csa_012463 [Cucumis sativus]) HSP 1 Score: 92.8 bits (229), Expect = 1.2e-15 Identity = 52/71 (73.24%), Postives = 58/71 (81.69%), Query Frame = 0
Query: 1 MFLCSSSICESRLLSS---SSSSSSLANTKNEIFVKNVKELLKVIVEEKEKLGRHFVSKR 60
+ L SSI ESRLLSS S S SS +N KNE+FVKN +E+LK I+EEKEKLGRHFVSKR
Sbjct: 17 ILLLCSSISESRLLSSPSQSQSPSSSSNKKNELFVKNAEEMLKFIIEEKEKLGRHFVSKR 76
Query: 61 LSPGGPDPRHH 69
LSPGGPDPRHH
Sbjct: 77 LSPGGPDPRHH 87
BLAST of CmoCh09G008200 vs. NCBI nr
Match: XP_031267366.1 (CLAVATA3/ESR (CLE)-related protein 3-like [Pistacia vera]) HSP 1 Score: 54.3 bits (129), Expect = 4.8e-04 Identity = 27/63 (42.86%), Postives = 42/63 (66.67%), Query Frame = 0
Query: 6 SSICESRLLSSSSSSSSLANTKNEIFVKNVKELLKVIVEEKEKLGRHFVSKRLSPGGPDP 65
+S+ + +++ S +N + + ++N KE+LK V+ +E LG+ F SKRLSPGGPDP
Sbjct: 42 TSLLKQKIIERHFESQQYSNDEGRVLMENAKEMLKDGVKRQEILGKFFDSKRLSPGGPDP 101
Query: 66 RHH 69
RHH
Sbjct: 102 RHH 104
The following BLAST results are available for this feature:
| Match Name | E-value | Identity | Description | |
|---|
| Match Name | E-value | Identity | Description | |
|---|
| A0A0A0L4M1 | 5.9e-16 | 73.24 | Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_4G627800 PE=4 SV=1 | [more] |
| Match Name | E-value | Identity | Description | |
|---|
| KGN55081.1 | 1.2e-15 | 73.24 | hypothetical protein Csa_012463 [Cucumis sativus] | [more] |
| XP_031267366.1 | 4.8e-04 | 42.86 | CLAVATA3/ESR (CLE)-related protein 3-like [Pistacia vera] | [more] |
| Match Name | E-value | Identity | Description | |
|---|
Relationships
The following mRNA feature(s) are a part of this gene:
GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
| Category |
Term Accession |
Term Name |
| biological_process |
GO:0045168 |
cell-cell signaling involved in cell fate commitment |
| molecular_function |
GO:0033612 |
receptor serine/threonine kinase binding |
|
