CmoCh09G007930 (gene) Cucurbita moschata (Rifu) v1

Overview


Name	CmoCh09G007930
Type	gene
Organism	Cucurbita moschata (Cucurbita moschata (Rifu) v1)
Description	Unknown protein
Location	Cmo_Chr09: 4061922 .. 4067640 (-)
RNA-Seq Expression	CmoCh09G007930
Synteny	CmoCh09G007930

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: polypeptideexonCDSthree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGGGATTCCCGTGCTCGCGAAAGTGCTCTCCAATGGCTCGGAGGTTGGTTGTATTCATTCATTCTTGTGATTCTGATAAGTAAGAACATGTATTTTGGTTGTTTTAGCTTATTTGGAAGGAGTGTATCGATTTCAGATTTGCGGAGCTCTTCCTGGGGCTTCTAATCTAGAATTGTGCTTATGGATTTATAAAATGATCAAATGTTTGTGCACTGCTTGTTTCCGTCCCCTGCTTGTTTTTAAATCCTTGGCTGGTGTTGTACTGAAATTCTATTTTCCAGGCACTAGATTAGTAACCCCTTGTTCTTGCATTTAACGTTGGAGTTTGAGGTTCCAATGAGTTGGTCACCTCGTCTTCTGTCCTCATTTAAGTTATTGATGACTATAATTATGAATCCTGTTGGGTCTGTGATTAATCCAACAAGGAAGGCTTTTATCAATGTACTGATAACTGTGTTCCATCTGCTTGATTCAAGTACTTTCGTCCTATTTTTTGTAATTTGTTTATTGACTGTTATAAGTATTTTGTTTCCTTGGTTTGTCTCTTCCTATTCTTTCTTGCCATAGCATACAGTATAATGTGGAAATAAGCCAGTAATAGAGTGTCTAAAGTCATATTAAGTGAAGGAAGATCAAAAAAAAAATAATAAAAATAAAAAGGAAATAGAAAACCTTGCAATCTAGGATTCTGAACCACTGAATAGTTCATTTCTTCAATTAAGATTTGATATGCTATGTATCCTGACCTTATCTACATAGAAGGCTTCCTCTAAAAATACGTTTCTTTGGTGTCTGAAACTGAGACAGTCCGCGTTGGTTGTCTTACTGCATTTTAGGAATCAGTATGGGATACAATAGCGTTTAAATCTTAATATACTTGTCCTGTTTTATCAAAGAAACCTACTGATTCAATATGACATGCAACAAAAGAAGTCTTCTGGGGATGGCTTTCAGCTCACTTGGATCTATCCATAATAACATCCCTGATAAACATTTATTGAATGCCAGTGAATCAAAAGGGCTTTACCGATGATGGCTTGTTGAAAGGATGATAACGTTTAAATGAACTCGATAGATTTGCACGTTTTTGTAGATCTTATGAATATTCTAAATTACCTGACATCTTGAACTAAGGGATTGGGTTGTTAATATTAATACTATATTGTTAAACATGGAGAGGCCTATTCCAATTGAAACTCCTGTGTGGAAAAGATAGACCTGAAGCAGAATCCTCTTATACTATCAAGGTTGCACATGGTTACTTCTACTTCCATTTCCCGTGCTTAAATATTCTGTACTAGACCTACACCTTCCTGGAACTCTTTGTATGAACGAATGGGATATGGGTTTCTTTCTTAGAGAGGAAAATATGAAACAAATAAGCTATTGGGAGGGTTTTACTGTGAACTGTCAAAATCAAAATGACGAACAAGGTGGCTATATGGCAAAGAAAAACACAATTAATATGAAGATGCAAGTAACATAGAGATCCATACATTCTAAATATTCTCTCATATTAGTTTCATCACTCTGTTAGTAGCAAGTTAGCATTTGGAAAGCTCTAAGTAGTGAATTTATCTCTCTCCTTAATCACCCCTCAACCTACGGAGGAGTGTGGGTGAAATTGAGTTTGTCGCCTAAGTGGCATCTATAAAGAAAATAAAGCAAAGATAATTTGACACAAACTGTTGAACTATTCTTTTTTGTTTTTGCTGGGATGCGAAATCTTAAAAACCCTCCTTTCGAGCATGGGGCGTACCCGACTGAGGAGGTGCATTACCCATGTTCAATTATTCTCGTACAACTCTTTTCTAGTTTGACTGAGAGGAAATTGTTGCAAAATAGGTGTCACTTAGAGGTTTTGCCTTTTGATTGAAAAGAATAAGAGGAAAGGGCTATTATCACAAAAATCAGTTACCAAAGAAGATGAGAGATCTCCCTATAAATCAAGTAACTTACAAATATGCATCTCGATTGGCATGAATCAAAGGAAAGGCTATAATCACAAAGGCTATAACTCTGCAATTTTTGAAAGTATTTCAGCAGTCCATTTACACTATGCCATCATGAGGATACTTCAATGGTTAAGACATTTCTACTTCCTTGAAGAAGTTATAGGTTCAAATCTCCACCTCCAGCTGCGTTGTAATATCGCCAATACAGTTATTAAAAGTGGGAAATATTAGTGTACTTATTTAAAGAACACTATCACTTTTTAAGACCTTTTAAGTTCAAAATTCTTCAAGCCAGATGGAGTATGCCTTTTGTTTTTCCTGCCGAGGTAGCTTGATATGGGGTGTTGGTACATTTATAACCTTATTCTTTCTTCTCCCAAATTGTATGACGAATATCTCACTTACTTTACTATGTTCACTTTATCTTTCCTTTTCCTTTTACTAAGGGGGGAGTTGAAAAGTAGTTTTTATTTTACTTTATTTACAGTAATAATTTTTCATCTGATATTTTTTTATAATATACTGACTTGGATAGTTATTGTTTATTCTGATACTTGTTCCTGGTCAGATTTTGAGAAAATAAATTAAACAATCTTGCAATCCCAGAAAATAAATAACTATGCAGTGTGGTTCTTGAAATTATATATTCTATAATTGAATTTGACTACTGCACGTTCTTGTGGGATATTTTTGATTATAAGATGTTGTATCTGGACAAATGTTCATTTTTTCTTTTAGTTTTTGTGTATTCCTGCAGACTTACATATGCCGTGCTTCTGTTTACTTAGGTTCAATGTCTTCATCTTTTTCTGCCTTCTTTTGGACTCTCTTTATATGATGCCTTACACGATTTGAGTTTGTGTTGATAGTTTAGTTTAATTTTCTTTCTCCATCTTAACGTCATTCCAAACTTTATGAACATTTTCCATCATTAAGATTATTCAGTGGATACATTGTCTTTTCTTGAAGTTCCTGTAAAATTTGTTTCAATTACTTTATGGATGTTATGTAGCCTGAAAATTTTCATAGTTAAGACAACCTACCTACTTAAAGTAATCATGTGATTAGCTTCACACATGCTTATCTACAAAAGCTTCTCTTTTAAATGATAGCATTCGAGATTACCATTCCTTTGATGTTTGACCTCTAACCCTCAAAAGTAGTTAGATTTCTTGTACTTGCTAATATCCCACGTGTGATAGCTGCAGATTTATAGATCTAGGTCATCTGTTTTTCTGTAATTTACTAAACCAGTCGCGTATCGTGTATTTCTAGTATCTCGTAAGAGATAGCAGCAGAGTTAGAAATCTAGGTCAGGTGTATTAATTGTACTATACACCTTTATGTATGTTGTGTTATACACTGGTTTTATTATTTAATAGAGCTCAGGATAAACAAATGTTTATATTTTATATGTAGAAAACTGTTCTCCTTTTTACTAGATACCGAGTAATATTCTCAATTATTCCATTTGGGTTACTTGGCATTAGAGATATCCAGATGTATGTAGAGTTTATCTATCTTTATTTGCTTTTTTTTTTCTTTTTGTCTTCCATTTCTATCTCAAGTAGTCCTTTTCAGATATACTTAGTTACGCAGACGGCAAGTTAGCTTATTGATCTGGTTTCTATGATTTTTGTTCATTGCTCTCTTATATTTTGGGGTCAGGAGATTTCCTTATGTTGTGTACTGTTTCCTGATGTCATGAACTAATATGCACTAGAAACACAAAAGCAATTGCAGACAATTGCTGATCCTGACTCATTGCTCACTGATGGATGTGGATTCCATTTTTTGTATTATTGTTCATCTTTTGGCCCAATTTTCATTCAAGGAAGCTTGCTTTCAATTGATGGTACTCTCTTTAACACCAGTGCGACGTGTCAATTGAAGAAAATTGATGCAATATTTGTGTTCGAAAGTTCTTCTTAGACTCTGGAGATATACTGTCCTTTCATCTTTCCTTTTCCTCTCTTTTGGGTGCTTTTGCTTGGCTGAACATTTTTTAGTAATGCTACACACATTGCTTCCCTTTTTCATGTGCAATTCAATTATTCTTGAATCTGAAATTCATAGAGAAACTTTATACACTTGTTATTAAAATTCTGATCTCCACAGGCTGTAATGTAATAGAAAAAAAAGAGTTAAATAAATACTTTATTCCATCAACTTGAGATTAAAAAAAAAAAAAACAAGGACCATTGATGCATCGTGTGGCTTCTTTTCTTCACCAAAAGAAATTTATGTCGCTTTCACTTTCTAATATACCATGTTTGACCTGTTTCTCTTTGCATGAAATTATTGACCATCATTATCATAATGTGTTCAAATACGCCATCGATTCCCACTCTTTCTTTCTTTCTTTCATTTATTTTTCTTTTAGTGAAAGTGAAAAGTCGTCCATTTATGCTTCAGAAAGGGTTTGCAAAAGAAGGTAGAAGGCCGTGGAGGGGAAAAAGGGCAGAAAAGTAGAGATTTTGACCTGGTCAAAAGTTGCAAACATGAACAAACACAACATTCATTTGAAGGTTTTGTAGGTTTCTTATCTCCACATGATTACCAGAGTTCCAAACTTGTAAGTTAACTCAATCTCTTCTGGGTTCATTGCAAAAACCTCTCTTTTTGTTATAATTGATCTGTTCTTATATTGTGACAGCTCAAAAAAGAAAAGGCCATGATAGTTCTGTTCATGAAGGGGAGGATCATTCATTTACCCGACTTCCCCGGCCGACCACGCCATCCGTTTTGGTAAACCTCAAATTTAACTGTTAGATTCTGTTTGTTCTTTATGATTGCTTGATTGATGATTCTGAATCTCCCAATGGCAAATGAATCTCCTGTACTCTTTTTGAAATCTGATTCAAGATTTACCTTGCCACACTCAAGCTAGGCTGTTTTGCTTTCCTCAATTGCTCCTCTGACTGGCTTTACCGTGTCAATCAATCACCAAACACTTGCTGCCAAAACAAAGGCGCTTTTTGCTTTCTTTCTTTTGGGTGTATTGCAATGACAAGGTTTGGTTTGATTTCTTTGGCTAGTAGATATTATCCTCAAGGTTTTTAAAATGCGTCGGTTAGGGGAGGTTTCCATACCTTTATAAAGAATGCTTTGTTCTCCTCTTCAATTGTTGTGTGATCTCACAATCGACCTACTTAAAGAGCCCAGCATCCTCACTCGCACTCGTTCCTCTCTCAAATCGATGTGAGATCTCACAATCCACCTCACTTTAAGGTCCAATGTCCTTGCTGACACTCGTTCCTCTCTCCAATCGATGTGGGATCTCACATCTTTGATCCCTACCCCAAACAAACTCCAATTCTTTTTCCATTTCCTTTTGAGAAAAGGATGAACAAACTTTATATGAATGGGGTCTCTTGCTTTGGAGTTGTTATTTCTTGTTTTACACAATCAAAGTGCCCAATAATTAGATTAGATTCCTTTAGTAGCACTTGGGATTTGTAATTTAATGGCAAACTTATTTTCATACAACTTTTAATAACTCTCACTTTATAACAATTTCTTTCTTTCTTGATCATGTAGTGTATGTATATCTTGTTTGCCAGATCCTTCTTCAAGCTTTTCCCTTTTTATTTTCAATTTTTTTTAGGGTTTTTGGTGTGTTCTTACAAAGACATCTACTTAAATTATTCATTCATGCATGACAACTGGGTCAATTTATGAATGATTTAAAGTTAGTGAATCATCTTGTTGGAATTTGGAAGTGTGAGGGGGCATTTTGAAATTGTACTTTTTTTAGGGTGGA

mRNA sequence

ATGGGATTCCCGTGCTCGCGAAAGTGCTCTCCAATGGCTCGGAGAAAGGGTTTGCAAAAGAAGGTAGAAGGCCGTGGAGGGGAAAAAGGGCAGAAAAGTAGAGATTTTGACCTGGTCAAAAGTTGCAAACATGAACAAACACAACATTCATTTGAAGGTTTTGTAGGTTTCTTATCTCCACATGATTACCAGAGTTCCAAACTTCTCAAAAAAGAAAAGGCCATGATAGTTCTGTTCATGAAGGGGAGGATCATTCATTTACCCGACTTCCCCGGCCGACCACGCCATCCGTTTTGGTAAACCTCAAATTTAACTGTTAGATTCTGTTTGTTCTTTATGATTGCTTGATTGATGATTCTGAATCTCCCAATGGCAAATGAATCTCCTGTACTCTTTTTGAAATCTGATTCAAGATTTACCTTGCCACACTCAAGCTAGGCTGTTTTGCTTTCCTCAATTGCTCCTCTGACTGGCTTTACCGTGTCAATCAATCACCAAACACTTGCTGCCAAAACAAAGGCGCTTTTTGCTTTCTTTCTTTTGGGTGTATTGCAATGACAAGGTTTGGTTTGATTTCTTTGGCTAGTAGATATTATCCTCAAGGTTTTTAAAATGCGTCGGTTAGGGGAGGTTTCCATACCTTTATAAAGAATGCTTTGTTCTCCTCTTCAATTGTTGTGTGATCTCACAATCGACCTACTTAAAGAGCCCAGCATCCTCACTCGCACTCGTTCCTCTCTCAAATCGATGTGAGATCTCACAATCCACCTCACTTTAAGGTCCAATGTCCTTGCTGACACTCGTTCCTCTCTCCAATCGATGTGGGATCTCACATCTTTGATCCCTACCCCAAACAAACTCCAATTCTTTTTCCATTTCCTTTTGAGAAAAGGATGAACAAACTTTATATGAATGGGGTCTCTTGCTTTGGAGTTGTTATTTCTTGTTTTACACAATCAAAGTGCCCAATAATTAGATTAGATTCCTTTAGTAGCACTTGGGATTTGTAATTTAATGGCAAACTTATTTTCATACAACTTTTAATAACTCTCACTTTATAACAATTTCTTTCTTTCTTGATCATGTAGTGTATGTATATCTTGTTTGCCAGATCCTTCTTCAAGCTTTTCCCTTTTTATTTTCAATTTTTTTTAGGGTTTTTGGTGTGTTCTTACAAAGACATCTACTTAAATTATTCATTCATGCATGACAACTGGGTCAATTTATGAATGATTTAAAGTTAGTGAATCATCTTGTTGGAATTTGGAAGTGTGAGGGGGCATTTTGAAATTGTACTTTTTTTAGGGTGGA

Coding sequence (CDS)

ATGGGATTCCCGTGCTCGCGAAAGTGCTCTCCAATGGCTCGGAGAAAGGGTTTGCAAAAGAAGGTAGAAGGCCGTGGAGGGGAAAAAGGGCAGAAAAGTAGAGATTTTGACCTGGTCAAAAGTTGCAAACATGAACAAACACAACATTCATTTGAAGGTTTTGTAGGTTTCTTATCTCCACATGATTACCAGAGTTCCAAACTTCTCAAAAAAGAAAAGGCCATGATAGTTCTGTTCATGAAGGGGAGGATCATTCATTTACCCGACTTCCCCGGCCGACCACGCCATCCGTTTTGGTAA

Protein sequence

MGFPCSRKCSPMARRKGLQKKVEGRGGEKGQKSRDFDLVKSCKHEQTQHSFEGFVGFLSPHDYQSSKLLKKEKAMIVLFMKGRIIHLPDFPGRPRHPFW

Homology

[Close]

BLAST of CmoCh09G007930 vs. ExPASy TrEMBL
Match: A0A6J1FAB3 (uncharacterized protein LOC111443532 OS=Cucurbita moschata OX=3662 GN=LOC111443532 PE=4 SV=1)

HSP 1 Score: 211.8 bits (538), Expect = 1.3e-51
Identity = 99/99 (100.00%), Postives = 99/99 (100.00%), Query Frame = 0


Query: 1   MGFPCSRKCSPMARRKGLQKKVEGRGGEKGQKSRDFDLVKSCKHEQTQHSFEGFVGFLSP 60
           MGFPCSRKCSPMARRKGLQKKVEGRGGEKGQKSRDFDLVKSCKHEQTQHSFEGFVGFLSP
Sbjct: 1   MGFPCSRKCSPMARRKGLQKKVEGRGGEKGQKSRDFDLVKSCKHEQTQHSFEGFVGFLSP 60

Query: 61  HDYQSSKLLKKEKAMIVLFMKGRIIHLPDFPGRPRHPFW 100
           HDYQSSKLLKKEKAMIVLFMKGRIIHLPDFPGRPRHPFW
Sbjct: 61  HDYQSSKLLKKEKAMIVLFMKGRIIHLPDFPGRPRHPFW 99

[Close]

BLAST of CmoCh09G007930 vs. NCBI nr
Match: XP_022937147.1 (uncharacterized protein LOC111443532 [Cucurbita moschata])

HSP 1 Score: 211.8 bits (538), Expect = 2.6e-51
Identity = 99/99 (100.00%), Postives = 99/99 (100.00%), Query Frame = 0


Query: 1   MGFPCSRKCSPMARRKGLQKKVEGRGGEKGQKSRDFDLVKSCKHEQTQHSFEGFVGFLSP 60
           MGFPCSRKCSPMARRKGLQKKVEGRGGEKGQKSRDFDLVKSCKHEQTQHSFEGFVGFLSP
Sbjct: 1   MGFPCSRKCSPMARRKGLQKKVEGRGGEKGQKSRDFDLVKSCKHEQTQHSFEGFVGFLSP 60

Query: 61  HDYQSSKLLKKEKAMIVLFMKGRIIHLPDFPGRPRHPFW 100
           HDYQSSKLLKKEKAMIVLFMKGRIIHLPDFPGRPRHPFW
Sbjct: 61  HDYQSSKLLKKEKAMIVLFMKGRIIHLPDFPGRPRHPFW 99

[Close]

BLAST of CmoCh09G007930 vs. NCBI nr
Match: KAG6591898.1 (hypothetical protein SDJN03_14244, partial [Cucurbita argyrosperma subsp. sororia])

HSP 1 Score: 100.1 bits (248), Expect = 1.1e-17
Identity = 47/52 (90.38%), Postives = 48/52 (92.31%), Query Frame = 0


Query: 50  SFEGFV--GFLSPHDYQSSKLLKKEKAMIVLFMKGRIIHLPDFPGRPRHPFW 100
           S +GF   GFLSPHDYQSSKLLKKEKAMIVLFMKGRIIHLPDFPGRPRHPFW
Sbjct: 163 SEKGFAKEGFLSPHDYQSSKLLKKEKAMIVLFMKGRIIHLPDFPGRPRHPFW 214

The following BLAST results are available for this feature:

BLAST of CmoCh09G007930 vs.


Match Name	E-value	Identity	Description

BLAST of CmoCh09G007930 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A6J1FAB3	1.3e-51	100.00	uncharacterized protein LOC111443532 OS=Cucurbita moschata OX=3662 GN=LOC1114435...	[more]

BLAST of CmoCh09G007930 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_022937147.1	2.6e-51	100.00	uncharacterized protein LOC111443532 [Cucurbita moschata]	[more]
KAG6591898.1	1.1e-17	90.38	hypothetical protein SDJN03_14244, partial [Cucurbita argyrosperma subsp. sorori...	[more]

BLAST of CmoCh09G007930 vs. NCBI nr


Match Name	E-value	Identity	Description

InterPro

Analysis Name: InterPro Annotations of Cucurbita moschata (Rifu) v1
Date Performed: 2021-10-25

Position :

Zoom :

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IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 1..33
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 16..33

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
CmoCh09G007930.1	CmoCh09G007930.1	mRNA