CmoCh09G006530 (gene) Cucurbita moschata (Rifu) v1

Overview


Name	CmoCh09G006530
Type	gene
Organism	Cucurbita moschata (Cucurbita moschata (Rifu) v1)
Description	Ran BP2/NZF zinc finger-like superfamily protein
Location	Cmo_Chr09: 3256928 .. 3259574 (+)
RNA-Seq Expression	CmoCh09G006530
Synteny	CmoCh09G006530

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonfive_prime_UTRCDSpolypeptidethree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

ATTTCAATGGCGTAAAACCCTGAACCCTTGACTTTCATAGCTTTGTTCTAGTTGTCTATGTCTCGTTTCAGAGTTCTTCACCGTCGAATTGATTCCCAACTTGGAAGCTATTTCTTCAGTTCACAGTCTACAAATTCCCTGCAATTTCACTCTCTTCCTTCTACTTCTCGAAGATCTCGAACTTTCTCGCCGAAAATCGATGGCGGGATCGGACCAGAAATTGTAGATGTGAAGAGGAATATACGTTTGGATTCTGTGGTTAACCAAGGCGCGAGATCGGGCGGAAGTAGAAATGAGGACAATGTGCTGAAAGGGAGAGTGGATTCGAAGGGGCGAGAGAAATTGACAAGGGAGGACGCTTTGGTCCGTAAAGAGCTTTCTCCGGACATGGAGATGTTTGTGAGACATTTATACAGGGAAGGATATTTTAATTATGCGAATTTTTTGCCTGATAACAAACTGGTTCTCAGTTACTTTGAATGTCGTCATGGACGGGATTTTATCAAGTCTGCGGCTGAGCGGTTTGGCAGAGACAATCAAGAAATTGCGAAGTAAGAAGAGTTTATGTTGTTAGTCTGGTGAATTTTCATCGTCAATGCGTTGATATTGATATCTCTGTTTCGGTTTTTGTGCAATTTTGTTTGAAAATTTGTGAGTAGATCATGTGTCTGATGTAGTGGATAGCTCTTGATCTCTTGCCACCAACGATTTCATCTATGAAGTATGAAATGCTAAGCAATTCAGAAATAGGTGGGAGAATAAAGCAAATCTTACGTAATTGGAGACAAAAAATTAGTATTATTTGGAAGTTCATGCTTGTAAGTCATTTAATGTCAATTTAGCAAATGGTGATGTGAAACTGCTGAAGCTAATTCCGATGAATCATGTGTATTTTTTAGCCTGTGCATTGACATGGGGAAACTATCCTTAGTTCTAGTTTTGAAATTTTTCAAAACATGCTCTTATACATCTTGTGGCAATCAAGACGAAGAAGAAATCGAGGTGATTGGTTGGTTTGAGAAGATATTGTGTTCATGTTTGCTTTTAAAATAAGAAACTGTTATTAGTTTCTGTTAGGGGTCAGATTACTCCAACTATATTTAGTATCATAAATGTAAAAATCTTAGTATGAATCATTCTCAGATGCATTATTTTTTTGGGTAAAATTCTTAGATGTTGATAGTTAAGGGTATGAAAGCTATGAAAAATAAGGACGATGGTGAGAGGTTTTCACACCCTTACAAATAAACGCGCGTCTACTAGGGAGAAGTTATCACACCCTTATAAAGAATATTTCGTTCTCCTCCCCAACTGACGTGGGATCTTATAATCAGAATTTTGTTTTCATTATTCAAATATGATAATATTGGCTGTTATTACTATTCCCAACCATTGTTTTTTGCTGGGTTTGTTGGTTTATAGAGGTTGTTTGGTTCAAATGGTTCAATTTTCAAAATTTATTGTACTCTTATGTCTCTCCAGTCGGTTCAATGTTGATGTTCATCTACCAAACTGACAATAGTTCAATTGGTTTTGGCATTAGTAATCCTCCACCAAAAAGTTATTCACCTAAGATATAACCGACCTGAACCGACCTCTAGTGCAAATTGTGCTGCTGCTGATGTCTGTGCTTGTCATTTTGTTTGCCTGCTGCTTGATAATTGCCTGAAGCCTTATGCTACTGATAATTTCAAGATTTTGAAGGAAATAATGTTTTCTATTCCATCTTTCTGGTTCTGGCAGTTGTGTTTCATTATGAAGACATACCCCTATTGTTTCACGTCTTGAACTCTGAGTCTTGGGATTTTCAGATGGTTGTCTGGCAGTGACTTGAGAAAGGTTGCTTTATTTGGATGCCCATCCACTGCTAGAAGAGATGTTTTTGCTGCTAAAAGACTGCGAAAATTCTTTAGTATCCAAGAAGACACAGTAAGCAAAAGCTCAGAAATCATTACTTCCCTTCTTCTATTACCATTTAAATCTTTGTTTTCTTCTCTCTTCAAATTATCCGCAGGTTTGTCACAATTGCACCTTGAGACAGTCATGCAAGTATGTGAATCAAGGTGTTTGGAATTGCGGCACCAAGAATTTAAATTTGGCGGTCGTTATGCAGGTTATTACTCAATATGACTTGCAAGCTATACCAAAACAACTTATAATACCTGAAGACATTAAGGCTTCTGTAAGCCGATTGCTGAAAGAGATATTGAAACTGAGCCCGACCGTGTCGAGGGACTAGTTTTCGCCGCAGCATACGTTGATCAACCCCATCCAATACTAGAAAATCTGGGTTTCTCTCTGGTGGCTGTTGAACCTTCAAGGCGTCCAGCTTGTTCATACGGCATGGTGAGTTTGTGAGCAGTAAAGTAAATACTCTGTTTCTTTGATGGACATACACGATTTAGAGTGCGTTAGCTTGCTTCATTTTGTCACATTGATATAGAACCTGAAAATTCAGTCTAATTATTATATACCTAAACAGTTCGGTTCTAAACTCTTGCTGTTTTCTCACCTTCAGTAGGGGAAGGCGCTACAATGTGGCTGCCAATGTACTACAAAAGTACTTCGTAATAGTTAAAGCTCATTGTCAAAGCTCATTGTCAGTGGATATTGTCTGTTTTGACATGTTACGTATTGCTATTAGTCG

mRNA sequence

ATTTCAATGGCGTAAAACCCTGAACCCTTGACTTTCATAGCTTTGTTCTAGTTGTCTATGTCTCGTTTCAGAGTTCTTCACCGTCGAATTGATTCCCAACTTGGAAGCTATTTCTTCAGTTCACAGTCTACAAATTCCCTGCAATTTCACTCTCTTCCTTCTACTTCTCGAAGATCTCGAACTTTCTCGCCGAAAATCGATGGCGGGATCGGACCAGAAATTGTAGATGTGAAGAGGAATATACGTTTGGATTCTGTGGTTAACCAAGGCGCGAGATCGGGCGGAAGTAGAAATGAGGACAATGTGCTGAAAGGGAGAGTGGATTCGAAGGGGCGAGAGAAATTGACAAGGGAGGACGCTTTGGTCCGTAAAGAGCTTTCTCCGGACATGGAGATGTTTGTGAGACATTTATACAGGGAAGGATATTTTAATTATGCGAATTTTTTGCCTGATAACAAACTGGTTCTCAGTTACTTTGAATGTCGTCATGGACGGGATTTTATCAAGTCTGCGGCTGAGCGGTTTGGCAGAGACAATCAAGAAATTGCGAAATGGTTGTCTGGCAGTGACTTGAGAAAGGTTGCTTTATTTGGATGCCCATCCACTGCTAGAAGAGATGTTTTTGCTGCTAAAAGACTGCGAAAATTCTTTAGTATCCAAGAAGACACAGTTTGTCACAATTGCACCTTGAGACAGTCATGCAAGTATGTGAATCAAGGTGTTTGGAATTGCGGCACCAAGAATTTAAATTTGGCGGTCGTTATGCAGGTTATTACTCAATATGACTTGCAAGCTATACCAAAACAACTTATAATACCTGAAGACATTAAGGCTTCTGTAAGCCGATTGCTGAAAGAGATATTGAAACTGAGCCCGACCGTGTCGAGGGACTAGTTTTCGCCGCAGCATACGTTGATCAACCCCATCCAATACTAGAAAATCTGGGTTTCTCTCTGGTGGCTGTTGAACCTTCAAGGCGTCCAGCTTGTTCATACGGCATGGTGAGTTTGTGAGCAGTAAAGTAAATACTCTGTTTCTTTGATGGACATACACGATTTAGAGTGCGTTAGCTTGCTTCATTTTGTCACATTGATATAGAACCTGAAAATTCAGTCTAATTATTATATACCTAAACAGTTCGGTTCTAAACTCTTGCTGTTTTCTCACCTTCAGTAGGGGAAGGCGCTACAATGTGGCTGCCAATGTACTACAAAAGTACTTCGTAATAGTTAAAGCTCATTGTCAAAGCTCATTGTCAGTGGATATTGTCTGTTTTGACATGTTACGTATTGCTATTAGTCG

Coding sequence (CDS)

ATGTCTCGTTTCAGAGTTCTTCACCGTCGAATTGATTCCCAACTTGGAAGCTATTTCTTCAGTTCACAGTCTACAAATTCCCTGCAATTTCACTCTCTTCCTTCTACTTCTCGAAGATCTCGAACTTTCTCGCCGAAAATCGATGGCGGGATCGGACCAGAAATTGTAGATGTGAAGAGGAATATACGTTTGGATTCTGTGGTTAACCAAGGCGCGAGATCGGGCGGAAGTAGAAATGAGGACAATGTGCTGAAAGGGAGAGTGGATTCGAAGGGGCGAGAGAAATTGACAAGGGAGGACGCTTTGGTCCGTAAAGAGCTTTCTCCGGACATGGAGATGTTTGTGAGACATTTATACAGGGAAGGATATTTTAATTATGCGAATTTTTTGCCTGATAACAAACTGGTTCTCAGTTACTTTGAATGTCGTCATGGACGGGATTTTATCAAGTCTGCGGCTGAGCGGTTTGGCAGAGACAATCAAGAAATTGCGAAATGGTTGTCTGGCAGTGACTTGAGAAAGGTTGCTTTATTTGGATGCCCATCCACTGCTAGAAGAGATGTTTTTGCTGCTAAAAGACTGCGAAAATTCTTTAGTATCCAAGAAGACACAGTTTGTCACAATTGCACCTTGAGACAGTCATGCAAGTATGTGAATCAAGGTGTTTGGAATTGCGGCACCAAGAATTTAAATTTGGCGGTCGTTATGCAGGTTATTACTCAATATGACTTGCAAGCTATACCAAAACAACTTATAATACCTGAAGACATTAAGGCTTCTGTAAGCCGATTGCTGAAAGAGATATTGAAACTGAGCCCGACCGTGTCGAGGGACTAG

Protein sequence

MSRFRVLHRRIDSQLGSYFFSSQSTNSLQFHSLPSTSRRSRTFSPKIDGGIGPEIVDVKRNIRLDSVVNQGARSGGSRNEDNVLKGRVDSKGREKLTREDALVRKELSPDMEMFVRHLYREGYFNYANFLPDNKLVLSYFECRHGRDFIKSAAERFGRDNQEIAKWLSGSDLRKVALFGCPSTARRDVFAAKRLRKFFSIQEDTVCHNCTLRQSCKYVNQGVWNCGTKNLNLAVVMQVITQYDLQAIPKQLIIPEDIKASVSRLLKEILKLSPTVSRD

Homology

[Close]

BLAST of CmoCh09G006530 vs. ExPASy TrEMBL
Match: A0A6J1F747 (uncharacterized protein LOC111442720 OS=Cucurbita moschata OX=3662 GN=LOC111442720 PE=4 SV=1)

HSP 1 Score: 552.4 bits (1422), Expect = 1.1e-153
Identity = 278/278 (100.00%), Postives = 278/278 (100.00%), Query Frame = 0


Query: 1   MSRFRVLHRRIDSQLGSYFFSSQSTNSLQFHSLPSTSRRSRTFSPKIDGGIGPEIVDVKR 60
           MSRFRVLHRRIDSQLGSYFFSSQSTNSLQFHSLPSTSRRSRTFSPKIDGGIGPEIVDVKR
Sbjct: 1   MSRFRVLHRRIDSQLGSYFFSSQSTNSLQFHSLPSTSRRSRTFSPKIDGGIGPEIVDVKR 60

Query: 61  NIRLDSVVNQGARSGGSRNEDNVLKGRVDSKGREKLTREDALVRKELSPDMEMFVRHLYR 120
           NIRLDSVVNQGARSGGSRNEDNVLKGRVDSKGREKLTREDALVRKELSPDMEMFVRHLYR
Sbjct: 61  NIRLDSVVNQGARSGGSRNEDNVLKGRVDSKGREKLTREDALVRKELSPDMEMFVRHLYR 120

Query: 121 EGYFNYANFLPDNKLVLSYFECRHGRDFIKSAAERFGRDNQEIAKWLSGSDLRKVALFGC 180
           EGYFNYANFLPDNKLVLSYFECRHGRDFIKSAAERFGRDNQEIAKWLSGSDLRKVALFGC
Sbjct: 121 EGYFNYANFLPDNKLVLSYFECRHGRDFIKSAAERFGRDNQEIAKWLSGSDLRKVALFGC 180

Query: 181 PSTARRDVFAAKRLRKFFSIQEDTVCHNCTLRQSCKYVNQGVWNCGTKNLNLAVVMQVIT 240
           PSTARRDVFAAKRLRKFFSIQEDTVCHNCTLRQSCKYVNQGVWNCGTKNLNLAVVMQVIT
Sbjct: 181 PSTARRDVFAAKRLRKFFSIQEDTVCHNCTLRQSCKYVNQGVWNCGTKNLNLAVVMQVIT 240

Query: 241 QYDLQAIPKQLIIPEDIKASVSRLLKEILKLSPTVSRD 279
           QYDLQAIPKQLIIPEDIKASVSRLLKEILKLSPTVSRD
Sbjct: 241 QYDLQAIPKQLIIPEDIKASVSRLLKEILKLSPTVSRD 278

[Close]

BLAST of CmoCh09G006530 vs. ExPASy TrEMBL
Match: A0A6J1IGS8 (uncharacterized protein LOC111477088 OS=Cucurbita maxima OX=3661 GN=LOC111477088 PE=4 SV=1)

HSP 1 Score: 533.9 bits (1374), Expect = 4.1e-148
Identity = 269/278 (96.76%), Postives = 273/278 (98.20%), Query Frame = 0


Query: 1   MSRFRVLHRRIDSQLGSYFFSSQSTNSLQFHSLPSTSRRSRTFSPKIDGGIGPEIVDVKR 60
           MSRFRVLHRRIDSQLGSYFFSSQSTNSLQFHSLPSTSRRSRTFSPKIDGGIGPEIVDVKR
Sbjct: 1   MSRFRVLHRRIDSQLGSYFFSSQSTNSLQFHSLPSTSRRSRTFSPKIDGGIGPEIVDVKR 60

Query: 61  NIRLDSVVNQGARSGGSRNEDNVLKGRVDSKGREKLTREDALVRKELSPDMEMFVRHLYR 120
           NIR DSVVNQGARSGGSRNEDNVLKGRVDSKGRE L RE+ALVRKELSPDMEMFVRHLYR
Sbjct: 61  NIRSDSVVNQGARSGGSRNEDNVLKGRVDSKGREILKRENALVRKELSPDMEMFVRHLYR 120

Query: 121 EGYFNYANFLPDNKLVLSYFECRHGRDFIKSAAERFGRDNQEIAKWLSGSDLRKVALFGC 180
           EGYFNY+NFLPDNKLVLSYFECRHGRDFIKSAAERF RDNQEIAKWLSGSDLRKVALFGC
Sbjct: 121 EGYFNYSNFLPDNKLVLSYFECRHGRDFIKSAAERFSRDNQEIAKWLSGSDLRKVALFGC 180

Query: 181 PSTARRDVFAAKRLRKFFSIQEDTVCHNCTLRQSCKYVNQGVWNCGTKNLNLAVVMQVIT 240
           PSTARRDVFAAKRLRKFF IQEDTVCHNCTLRQSCKYVNQGVWNCGTKNLNLAVVM+VIT
Sbjct: 181 PSTARRDVFAAKRLRKFFRIQEDTVCHNCTLRQSCKYVNQGVWNCGTKNLNLAVVMKVIT 240

Query: 241 QYDLQAIPKQLIIPEDIKASVSRLLKEILKLSPTVSRD 279
           QYDLQAIPKQLIIPEDIKASVSRLLKEILKLSPTVSR+
Sbjct: 241 QYDLQAIPKQLIIPEDIKASVSRLLKEILKLSPTVSRN 278

[Close]

BLAST of CmoCh09G006530 vs. ExPASy TrEMBL
Match: A0A0A0L4J9 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_4G625010 PE=4 SV=1)

HSP 1 Score: 396.4 bits (1017), Expect = 1.0e-106
Identity = 211/286 (73.78%), Postives = 230/286 (80.42%), Query Frame = 0


Query: 1   MSRFRVLHRRIDSQLGSYFFSSQSTNSLQFHSLPSTSRRSRTFSPKIDGGIGPEIVDVKR 60
           MSRFR LH +I        F+SQST SLQFH LPST   SR+FS  I   I PEIV   R
Sbjct: 1   MSRFRPLHSQIQ------LFNSQSTISLQFHLLPST---SRSFSLNIGERIAPEIVPGNR 60

Query: 61  NIRLDSVVNQGARSGGS--------RNEDNVLKGRVDSKGREKLTREDALVRKELSPDME 120
           N     +  + A S GS        RNE+ VLKG+V S+G +KLTREDAL+RK+LSPDME
Sbjct: 61  NTPPPFLCREAANSDGSVKSQEGKGRNEETVLKGKVGSEGNKKLTREDALLRKQLSPDME 120

Query: 121 MFVRHLYREGYFNYANFLPDNKLVLSYFECRHGRDFIKSAAERFGRDNQEIAKWLSGSDL 180
           MFVRHLY+EGYFNYANFLPDNK VLSYFECRHGRDFIKSAA+RFGRDNQEIAKWLSGSDL
Sbjct: 121 MFVRHLYQEGYFNYANFLPDNKFVLSYFECRHGRDFIKSAAQRFGRDNQEIAKWLSGSDL 180

Query: 181 RKVALFGCPSTARRDVFAAKRLRKFFSIQEDTVCHNCTLRQSCKYVNQGVWNCGTKNLNL 240
           RKVA FGCPSTAR+DVFAAKRLRKFF IQEDTVCH C LRQSCKYVNQGVWN  TKNLNL
Sbjct: 181 RKVAFFGCPSTARKDVFAAKRLRKFFRIQEDTVCHKCILRQSCKYVNQGVWNEDTKNLNL 240

Query: 241 AVVMQVITQYDLQAIPKQLIIPEDIKASVSRLLKEILKLSPTVSRD 279
            VV+QV TQY L+AIP+QLIIPED+KASVSRLLKEIL LSPTVSR+
Sbjct: 241 GVVLQVTTQYALEAIPEQLIIPEDVKASVSRLLKEILNLSPTVSRN 277

[Close]

BLAST of CmoCh09G006530 vs. ExPASy TrEMBL
Match: A0A5A7VHD0 (Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold384G00760 PE=4 SV=1)

HSP 1 Score: 385.6 bits (989), Expect = 1.8e-103
Identity = 209/286 (73.08%), Postives = 227/286 (79.37%), Query Frame = 0


Query: 1   MSRFRVLHRRIDSQLGSYFFSSQSTNSLQFHSLPSTSRRSRTFSPKIDGGIGPEIVDVKR 60
           MSRFR L+ +I        F+SQST SLQFH LPST   SR+FS KI  GI PEIV  K 
Sbjct: 1   MSRFRPLYSQI------LLFNSQSTISLQFHLLPST---SRSFSLKIGEGIEPEIVPAKT 60

Query: 61  NIRLDSVVNQGARSGGS--------RNEDNVLKGRVDSKGREKLTREDALVRKELSPDME 120
           N     +  + A S GS         NE+ VLKG+V S+G +KL REDAL+RKELSPDME
Sbjct: 61  NTPPAFLSREAANSNGSVKSLEGKGGNEETVLKGKVGSEGNKKLAREDALLRKELSPDME 120

Query: 121 MFVRHLYREGYFNYANFLPDNKLVLSYFECRHGRDFIKSAAERFGRDNQEIAKWLSGSDL 180
           MF RHLYREGYFNYANFLP NK VLSYFECR GR+FIKS A+RFGRDNQEIAKWLSGSDL
Sbjct: 121 MFARHLYREGYFNYANFLPVNKFVLSYFECRRGRNFIKSTAQRFGRDNQEIAKWLSGSDL 180

Query: 181 RKVALFGCPSTARRDVFAAKRLRKFFSIQEDTVCHNCTLRQSCKYVNQGVWNCGTKNLNL 240
           RKVALFGCPSTAR+DVFAAKRLRKFF IQEDTVCH C LRQSCKYVNQGVWN  TKNLNL
Sbjct: 181 RKVALFGCPSTARKDVFAAKRLRKFFRIQEDTVCHKCILRQSCKYVNQGVWNEDTKNLNL 240

Query: 241 AVVMQVITQYDLQAIPKQLIIPEDIKASVSRLLKEILKLSPTVSRD 279
            VV+QVITQY L+AIP+QLIIPEDIKASVSRLLKEIL LS TVSR+
Sbjct: 241 GVVLQVITQYALEAIPEQLIIPEDIKASVSRLLKEILNLSQTVSRN 277

[Close]

BLAST of CmoCh09G006530 vs. ExPASy TrEMBL
Match: A0A6J1CC23 (uncharacterized protein LOC111009818 OS=Momordica charantia OX=3673 GN=LOC111009818 PE=4 SV=1)

HSP 1 Score: 300.1 bits (767), Expect = 9.9e-78
Identity = 169/264 (64.02%), Postives = 185/264 (70.08%), Query Frame = 0


Query: 1   MSRFRVLHRRIDS--QLGSYFFSSQSTNSLQFHSLPSTSRRSRTFSPKIDGGIGPEIVDV 60
           MS+FR LHR IDS  +L  +FF SQS++SLQ H+L S SRR+R FS KI+ GIGPEIVDV
Sbjct: 1   MSQFRALHRHIDSYLKLRYHFFCSQSSHSLQVHTLTSISRRTRNFSLKIEEGIGPEIVDV 60

Query: 61  KRNIRLDSVVNQGARSGGS--------RNEDNVLKG------------RVDSKGREKLT- 120
            R+IR D VV+   RS  S        RN+DNVL+G            R DS G  KLT 
Sbjct: 61  NRDIRTDFVVDGAVRSNRSAECRERERRNQDNVLEGSSGESERGAGWLRADSGGSGKLTR 120

Query: 121 -------------------------REDALVRKELSPDMEMFVRHLYREGYFNYANFLPD 180
                                    REDALVRKELSPD+EM VRHLY EGYF+YANFLPD
Sbjct: 121 KGKPGSLYVLVSKQNGCTERREVRMREDALVRKELSPDIEMLVRHLYGEGYFSYANFLPD 180

Query: 181 NKLVLSYFECRHGRDFIKSAAERFGRDNQEIAKWLSGSDLRKVALFGCPSTARRDVFAAK 217
           NKLVLSYFE RHGRDFIKSAAERFGRDNQEIAKWLSGSDLRKVAL GCPSTAR+DVF+AK
Sbjct: 181 NKLVLSYFEYRHGRDFIKSAAERFGRDNQEIAKWLSGSDLRKVALLGCPSTARKDVFSAK 240

[Close]

BLAST of CmoCh09G006530 vs. NCBI nr
Match: XP_022935982.1 (uncharacterized protein LOC111442720 [Cucurbita moschata])

HSP 1 Score: 552.4 bits (1422), Expect = 2.3e-153
Identity = 278/278 (100.00%), Postives = 278/278 (100.00%), Query Frame = 0


Query: 1   MSRFRVLHRRIDSQLGSYFFSSQSTNSLQFHSLPSTSRRSRTFSPKIDGGIGPEIVDVKR 60
           MSRFRVLHRRIDSQLGSYFFSSQSTNSLQFHSLPSTSRRSRTFSPKIDGGIGPEIVDVKR
Sbjct: 1   MSRFRVLHRRIDSQLGSYFFSSQSTNSLQFHSLPSTSRRSRTFSPKIDGGIGPEIVDVKR 60

Query: 61  NIRLDSVVNQGARSGGSRNEDNVLKGRVDSKGREKLTREDALVRKELSPDMEMFVRHLYR 120
           NIRLDSVVNQGARSGGSRNEDNVLKGRVDSKGREKLTREDALVRKELSPDMEMFVRHLYR
Sbjct: 61  NIRLDSVVNQGARSGGSRNEDNVLKGRVDSKGREKLTREDALVRKELSPDMEMFVRHLYR 120

Query: 121 EGYFNYANFLPDNKLVLSYFECRHGRDFIKSAAERFGRDNQEIAKWLSGSDLRKVALFGC 180
           EGYFNYANFLPDNKLVLSYFECRHGRDFIKSAAERFGRDNQEIAKWLSGSDLRKVALFGC
Sbjct: 121 EGYFNYANFLPDNKLVLSYFECRHGRDFIKSAAERFGRDNQEIAKWLSGSDLRKVALFGC 180

Query: 181 PSTARRDVFAAKRLRKFFSIQEDTVCHNCTLRQSCKYVNQGVWNCGTKNLNLAVVMQVIT 240
           PSTARRDVFAAKRLRKFFSIQEDTVCHNCTLRQSCKYVNQGVWNCGTKNLNLAVVMQVIT
Sbjct: 181 PSTARRDVFAAKRLRKFFSIQEDTVCHNCTLRQSCKYVNQGVWNCGTKNLNLAVVMQVIT 240

Query: 241 QYDLQAIPKQLIIPEDIKASVSRLLKEILKLSPTVSRD 279
           QYDLQAIPKQLIIPEDIKASVSRLLKEILKLSPTVSRD
Sbjct: 241 QYDLQAIPKQLIIPEDIKASVSRLLKEILKLSPTVSRD 278

[Close]

BLAST of CmoCh09G006530 vs. NCBI nr
Match: KAG6591767.1 (hypothetical protein SDJN03_14113, partial [Cucurbita argyrosperma subsp. sororia])

HSP 1 Score: 542.0 bits (1395), Expect = 3.1e-150
Identity = 273/278 (98.20%), Postives = 275/278 (98.92%), Query Frame = 0


Query: 1   MSRFRVLHRRIDSQLGSYFFSSQSTNSLQFHSLPSTSRRSRTFSPKIDGGIGPEIVDVKR 60
           MSRFRVLHRRIDSQLGSYFFSSQST+SLQFHSLPSTSRRSRTFSPKIDGGIGPEIVDVKR
Sbjct: 1   MSRFRVLHRRIDSQLGSYFFSSQSTSSLQFHSLPSTSRRSRTFSPKIDGGIGPEIVDVKR 60

Query: 61  NIRLDSVVNQGARSGGSRNEDNVLKGRVDSKGREKLTREDALVRKELSPDMEMFVRHLYR 120
           NIR DSVVNQGARSGGSRNEDNVLKGRVDSKGREKLTREDALVRKELSPDMEMFVRHLYR
Sbjct: 61  NIRSDSVVNQGARSGGSRNEDNVLKGRVDSKGREKLTREDALVRKELSPDMEMFVRHLYR 120

Query: 121 EGYFNYANFLPDNKLVLSYFECRHGRDFIKSAAERFGRDNQEIAKWLSGSDLRKVALFGC 180
           EGYFNYANFLPDNKLVLSYFECRHGRDFIKSAAERFGRDNQEIAKWLSGSDLRKVALFGC
Sbjct: 121 EGYFNYANFLPDNKLVLSYFECRHGRDFIKSAAERFGRDNQEIAKWLSGSDLRKVALFGC 180

Query: 181 PSTARRDVFAAKRLRKFFSIQEDTVCHNCTLRQSCKYVNQGVWNCGTKNLNLAVVMQVIT 240
           PS ARRDVFAAKRLRKFF IQEDTVCHNCTLRQSCKYVNQGVWNCGTKNLNLAVVMQVIT
Sbjct: 181 PSIARRDVFAAKRLRKFFRIQEDTVCHNCTLRQSCKYVNQGVWNCGTKNLNLAVVMQVIT 240

Query: 241 QYDLQAIPKQLIIPEDIKASVSRLLKEILKLSPTVSRD 279
           QYDLQAIPKQLIIPEDIKASVSRLLKEILKLSPTVSR+
Sbjct: 241 QYDLQAIPKQLIIPEDIKASVSRLLKEILKLSPTVSRN 278

[Close]

BLAST of CmoCh09G006530 vs. NCBI nr
Match: KAG7024649.1 (hypothetical protein SDJN02_13467, partial [Cucurbita argyrosperma subsp. argyrosperma])

HSP 1 Score: 542.0 bits (1395), Expect = 3.1e-150
Identity = 273/278 (98.20%), Postives = 275/278 (98.92%), Query Frame = 0


Query: 1   MSRFRVLHRRIDSQLGSYFFSSQSTNSLQFHSLPSTSRRSRTFSPKIDGGIGPEIVDVKR 60
           MSRFRVLHRRIDSQLGSYFFSSQS +SLQFHSLPSTSRRSRTFSPKIDGGIGPEIVDVKR
Sbjct: 1   MSRFRVLHRRIDSQLGSYFFSSQSMSSLQFHSLPSTSRRSRTFSPKIDGGIGPEIVDVKR 60

Query: 61  NIRLDSVVNQGARSGGSRNEDNVLKGRVDSKGREKLTREDALVRKELSPDMEMFVRHLYR 120
           NIR DSVVNQGARSGGSRNEDNVLKGRVDSKGREKLTREDALVRKELSPDMEMFVRHLYR
Sbjct: 61  NIRSDSVVNQGARSGGSRNEDNVLKGRVDSKGREKLTREDALVRKELSPDMEMFVRHLYR 120

Query: 121 EGYFNYANFLPDNKLVLSYFECRHGRDFIKSAAERFGRDNQEIAKWLSGSDLRKVALFGC 180
           EGYFNYANFLPDNKLVLSYFECRHGRDFIKSAAERFGRDNQEIAKWLSGSDLRKVALFGC
Sbjct: 121 EGYFNYANFLPDNKLVLSYFECRHGRDFIKSAAERFGRDNQEIAKWLSGSDLRKVALFGC 180

Query: 181 PSTARRDVFAAKRLRKFFSIQEDTVCHNCTLRQSCKYVNQGVWNCGTKNLNLAVVMQVIT 240
           PSTARRDVFAAKRLRKFF IQEDTVCHNCTLRQSCKYVNQGVWNCGTKNLNLAVVMQVIT
Sbjct: 181 PSTARRDVFAAKRLRKFFRIQEDTVCHNCTLRQSCKYVNQGVWNCGTKNLNLAVVMQVIT 240

Query: 241 QYDLQAIPKQLIIPEDIKASVSRLLKEILKLSPTVSRD 279
           QYDLQAIPKQLIIPEDIKASVSRLLKEILKLSPTVSR+
Sbjct: 241 QYDLQAIPKQLIIPEDIKASVSRLLKEILKLSPTVSRN 278

[Close]

BLAST of CmoCh09G006530 vs. NCBI nr
Match: XP_023536478.1 (uncharacterized protein LOC111797643 [Cucurbita pepo subsp. pepo])

HSP 1 Score: 538.5 bits (1386), Expect = 3.4e-149
Identity = 271/278 (97.48%), Postives = 275/278 (98.92%), Query Frame = 0


Query: 1   MSRFRVLHRRIDSQLGSYFFSSQSTNSLQFHSLPSTSRRSRTFSPKIDGGIGPEIVDVKR 60
           MSRFRVLHRRIDSQLGSYFFSSQSTNSLQFHSL STSRRSRTF P+IDGGIGPEIVDVKR
Sbjct: 1   MSRFRVLHRRIDSQLGSYFFSSQSTNSLQFHSLSSTSRRSRTFLPEIDGGIGPEIVDVKR 60

Query: 61  NIRLDSVVNQGARSGGSRNEDNVLKGRVDSKGREKLTREDALVRKELSPDMEMFVRHLYR 120
           NIR DSVVNQGARSGGSRNEDNVLKGRVDSKGREKLTREDALVRKELSPDMEMFVR+LYR
Sbjct: 61  NIRSDSVVNQGARSGGSRNEDNVLKGRVDSKGREKLTREDALVRKELSPDMEMFVRYLYR 120

Query: 121 EGYFNYANFLPDNKLVLSYFECRHGRDFIKSAAERFGRDNQEIAKWLSGSDLRKVALFGC 180
           EGYFNYANFLPDNKLVLSYFECRHGRDFIKSAAERFGRDNQEIAKWLSGSDLRKVALFGC
Sbjct: 121 EGYFNYANFLPDNKLVLSYFECRHGRDFIKSAAERFGRDNQEIAKWLSGSDLRKVALFGC 180

Query: 181 PSTARRDVFAAKRLRKFFSIQEDTVCHNCTLRQSCKYVNQGVWNCGTKNLNLAVVMQVIT 240
           PSTARRDVFAAKRLRKFFSIQEDTVCHNCTLRQSCKYVNQGVWNCGTKNLNLAVVMQVIT
Sbjct: 181 PSTARRDVFAAKRLRKFFSIQEDTVCHNCTLRQSCKYVNQGVWNCGTKNLNLAVVMQVIT 240

Query: 241 QYDLQAIPKQLIIPEDIKASVSRLLKEILKLSPTVSRD 279
           QYDLQAIPKQLI+PEDIKASVSRLLKEILKLSPTVSR+
Sbjct: 241 QYDLQAIPKQLIVPEDIKASVSRLLKEILKLSPTVSRN 278

[Close]

BLAST of CmoCh09G006530 vs. NCBI nr
Match: XP_022976827.1 (uncharacterized protein LOC111477088 [Cucurbita maxima])

HSP 1 Score: 533.9 bits (1374), Expect = 8.4e-148
Identity = 269/278 (96.76%), Postives = 273/278 (98.20%), Query Frame = 0


Query: 1   MSRFRVLHRRIDSQLGSYFFSSQSTNSLQFHSLPSTSRRSRTFSPKIDGGIGPEIVDVKR 60
           MSRFRVLHRRIDSQLGSYFFSSQSTNSLQFHSLPSTSRRSRTFSPKIDGGIGPEIVDVKR
Sbjct: 1   MSRFRVLHRRIDSQLGSYFFSSQSTNSLQFHSLPSTSRRSRTFSPKIDGGIGPEIVDVKR 60

Query: 61  NIRLDSVVNQGARSGGSRNEDNVLKGRVDSKGREKLTREDALVRKELSPDMEMFVRHLYR 120
           NIR DSVVNQGARSGGSRNEDNVLKGRVDSKGRE L RE+ALVRKELSPDMEMFVRHLYR
Sbjct: 61  NIRSDSVVNQGARSGGSRNEDNVLKGRVDSKGREILKRENALVRKELSPDMEMFVRHLYR 120

Query: 121 EGYFNYANFLPDNKLVLSYFECRHGRDFIKSAAERFGRDNQEIAKWLSGSDLRKVALFGC 180
           EGYFNY+NFLPDNKLVLSYFECRHGRDFIKSAAERF RDNQEIAKWLSGSDLRKVALFGC
Sbjct: 121 EGYFNYSNFLPDNKLVLSYFECRHGRDFIKSAAERFSRDNQEIAKWLSGSDLRKVALFGC 180

Query: 181 PSTARRDVFAAKRLRKFFSIQEDTVCHNCTLRQSCKYVNQGVWNCGTKNLNLAVVMQVIT 240
           PSTARRDVFAAKRLRKFF IQEDTVCHNCTLRQSCKYVNQGVWNCGTKNLNLAVVM+VIT
Sbjct: 181 PSTARRDVFAAKRLRKFFRIQEDTVCHNCTLRQSCKYVNQGVWNCGTKNLNLAVVMKVIT 240

Query: 241 QYDLQAIPKQLIIPEDIKASVSRLLKEILKLSPTVSRD 279
           QYDLQAIPKQLIIPEDIKASVSRLLKEILKLSPTVSR+
Sbjct: 241 QYDLQAIPKQLIIPEDIKASVSRLLKEILKLSPTVSRN 278

[Close]

BLAST of CmoCh09G006530 vs. TAIR 10
Match: AT1G53460.1 (BEST Arabidopsis thaliana protein match is: Ran BP2/NZF zinc finger-like superfamily protein (TAIR:AT1G70650.2); Has 485 Blast hits to 413 proteins in 88 species: Archae - 11; Bacteria - 27; Metazoa - 119; Fungi - 17; Plants - 101; Viruses - 2; Other Eukaryotes - 208 (source: NCBI BLink). )

HSP 1 Score: 189.5 bits (480), Expect = 3.6e-48
Identity = 96/179 (53.63%), Postives = 126/179 (70.39%), Query Frame = 0


Query: 98  REDAL-VRKELSPDMEMFVRHLYREGYFNYANFLPDNKLVLSYFECRHGRDFIKSAAERF 157
           +ED + V KEL  +M  FVR L++EGY N ANF+   KL +   +  + R F+K AAERF
Sbjct: 131 KEDVIRVYKELPIEMVSFVRLLHKEGYLNKANFITGEKLDMGNLDEEYARTFVKFAAERF 190

Query: 158 GRDNQEIAKWLSGSDLRKVALFGCPSTARRDVFAAKRLRKFFSIQEDTVCHNCTLRQSCK 217
           G+D QEIAKWLSGSDL+K+ LFGCPS  +R VFAAK LR FF I E+ VC  C L++ CK
Sbjct: 191 GKDYQEIAKWLSGSDLKKIVLFGCPSLEKRAVFAAKTLRNFFDIHENNVCEKCVLKEKCK 250

Query: 218 YVNQGVWNCGTKNLNLAVVMQVITQYDLQAIPKQLIIPEDIKASVSRLLKEILKLSPTV 276
           + NQ VW+  TK+L+L+VVM+VIT Y L     +L +P++++ SVSRLL EI  LS T+
Sbjct: 251 FPNQSVWDGKTKHLHLSVVMKVITLYPLDLTHPKLQVPQEVQDSVSRLLTEIQNLSRTI 309

[Close]

BLAST of CmoCh09G006530 vs. TAIR 10
Match: AT1G55040.1 (zinc finger (Ran-binding) family protein )

HSP 1 Score: 66.2 bits (160), Expect = 4.6e-11
Identity = 40/129 (31.01%), Postives = 69/129 (53.49%), Query Frame = 0


Query: 149 IKSAAERFGRDNQEIAKWLSGSDLRKVALFGCPSTARRDVFAAKRLRKFFSIQEDTVCHN 208
           +++A   FG+D  +I + LS +D++ +   GCP+T R+ VF+ K LRK   + E  VC +
Sbjct: 206 VQNACSNFGKDRFDILRSLSRNDIQILVGHGCPATDRKVVFSGKLLRKRVHLDEGDVCSS 265

Query: 209 CTLRQSCKYVNQGVWNCGTKNLNLAVVMQVITQYDLQAI-----PKQLIIPEDIKASVSR 268
           C+LR SC+     +            +M+++  Y    +      K L+  + +K+ V +
Sbjct: 266 CSLRNSCE--KAFLLTNKEDEARTIDLMRILFTYGFDPLNGTVANKSLLKKKSVKSVVRK 325

Query: 269 LLKEILKLS 273
           LL EI+KLS
Sbjct: 326 LLHEIVKLS 332

[Close]

BLAST of CmoCh09G006530 vs. TAIR 10
Match: AT1G70650.1 (Ran BP2/NZF zinc finger-like superfamily protein )

HSP 1 Score: 59.3 bits (142), Expect = 5.6e-09
Identity = 49/162 (30.25%), Postives = 82/162 (50.62%), Query Frame = 0


Query: 118 LYREGYFNYANFLPDNKLVLSYFECRHGRDFIKSAAERFGRDNQEIAKWLSGSDLRKVAL 177
           L ++GYF   + +P    ++S  E  H    I++A   F R    + + LS  D++ +A 
Sbjct: 56  LAKKGYFE-ESLIP----LMSSKESNH----IRTACLNFARHRFTLVRNLSKKDIKVIAG 115

Query: 178 FGCPSTARRDVFAAKRLRKFFSIQEDTVCHNCTLRQSC-KYVNQGVWNCGTKNLNLAVVM 237
            GCPST R+ V + KRLR +  I E  VC +C LR  C +   Q   + G + ++   VM
Sbjct: 116 CGCPSTDRKVVNSGKRLRAYVGIDEGNVCGSCNLRGKCERAYAQARDDEGARTID---VM 175

Query: 238 QVITQYDLQAI----PKQLIIPEDIKASVSRLLKEILKLSPT 275
           +++  Y L +I      +    + ++ SV +LL+E +  S T
Sbjct: 176 RLLLTYGLDSISPTVENRACQTKLVEDSVRKLLRESVAYSLT 205

[Close]

BLAST of CmoCh09G006530 vs. TAIR 10
Match: AT1G70650.2 (Ran BP2/NZF zinc finger-like superfamily protein )

HSP 1 Score: 59.3 bits (142), Expect = 5.6e-09
Identity = 49/162 (30.25%), Postives = 82/162 (50.62%), Query Frame = 0


Query: 118 LYREGYFNYANFLPDNKLVLSYFECRHGRDFIKSAAERFGRDNQEIAKWLSGSDLRKVAL 177
           L ++GYF   + +P    ++S  E  H    I++A   F R    + + LS  D++ +A 
Sbjct: 56  LAKKGYFE-ESLIP----LMSSKESNH----IRTACLNFARHRFTLVRNLSKKDIKVIAG 115

Query: 178 FGCPSTARRDVFAAKRLRKFFSIQEDTVCHNCTLRQSC-KYVNQGVWNCGTKNLNLAVVM 237
            GCPST R+ V + KRLR +  I E  VC +C LR  C +   Q   + G + ++   VM
Sbjct: 116 CGCPSTDRKVVNSGKRLRAYVGIDEGNVCGSCNLRGKCERAYAQARDDEGARTID---VM 175

Query: 238 QVITQYDLQAI----PKQLIIPEDIKASVSRLLKEILKLSPT 275
           +++  Y L +I      +    + ++ SV +LL+E +  S T
Sbjct: 176 RLLLTYGLDSISPTVENRACQTKLVEDSVRKLLRESVAYSLT 205

[Close]

BLAST of CmoCh09G006530 vs. TAIR 10
Match: AT1G48570.1 (zinc finger (Ran-binding) family protein )

HSP 1 Score: 57.0 bits (136), Expect = 2.8e-08
Identity = 34/107 (31.78%), Postives = 51/107 (47.66%), Query Frame = 0


Query: 109 PDMEMFVRHLYREGYFNYANFLPDNKLVLSYFECRHGRDFIKSAAERFGRDNQEIAKWLS 168
           P+   FV  L  +GYF       D +    Y E       +K A   F RD  ++ + LS
Sbjct: 63  PEWITFVDRLKTKGYFT-----KDTEDDTVYQE----MILVKDACLSFARDRYDVLRSLS 122

Query: 169 GSDLRKVALFGCPSTARRDVFAAKRLRKFFSIQEDTVCHNCTLRQSC 216
             D++ +   GCP+  R+ V ++KR+R    + E  VC +C LR SC
Sbjct: 123 SGDVQALVERGCPNLFRKTVNSSKRIRAHVKLNEGDVCGSCDLRSSC 160

The following BLAST results are available for this feature:

BLAST of CmoCh09G006530 vs.


Match Name	E-value	Identity	Description

BLAST of CmoCh09G006530 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A6J1F747	1.1e-153	100.00	uncharacterized protein LOC111442720 OS=Cucurbita moschata OX=3662 GN=LOC1114427...	[more]
A0A6J1IGS8	4.1e-148	96.76	uncharacterized protein LOC111477088 OS=Cucurbita maxima OX=3661 GN=LOC111477088...	[more]
A0A0A0L4J9	1.0e-106	73.78	Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_4G625010 PE=4 SV=1	[more]
A0A5A7VHD0	1.8e-103	73.08	Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold...	[more]
A0A6J1CC23	9.9e-78	64.02	uncharacterized protein LOC111009818 OS=Momordica charantia OX=3673 GN=LOC111009...	[more]

BLAST of CmoCh09G006530 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_022935982.1	2.3e-153	100.00	uncharacterized protein LOC111442720 [Cucurbita moschata]	[more]
KAG6591767.1	3.1e-150	98.20	hypothetical protein SDJN03_14113, partial [Cucurbita argyrosperma subsp. sorori...	[more]
KAG7024649.1	3.1e-150	98.20	hypothetical protein SDJN02_13467, partial [Cucurbita argyrosperma subsp. argyro...	[more]
XP_023536478.1	3.4e-149	97.48	uncharacterized protein LOC111797643 [Cucurbita pepo subsp. pepo]	[more]
XP_022976827.1	8.4e-148	96.76	uncharacterized protein LOC111477088 [Cucurbita maxima]	[more]

BLAST of CmoCh09G006530 vs. TAIR 10


Match Name	E-value	Identity	Description
AT1G53460.1	3.6e-48	53.63	BEST Arabidopsis thaliana protein match is: Ran BP2/NZF zinc finger-like superfa...	[more]
AT1G55040.1	4.6e-11	31.01	zinc finger (Ran-binding) family protein	[more]
AT1G70650.1	5.6e-09	30.25	Ran BP2/NZF zinc finger-like superfamily protein	[more]
AT1G70650.2	5.6e-09	30.25	Ran BP2/NZF zinc finger-like superfamily protein	[more]
AT1G48570.1	2.8e-08	31.78	zinc finger (Ran-binding) family protein	[more]

InterPro

Analysis Name: InterPro Annotations of Cucurbita moschata (Rifu) v1
Date Performed: 2021-10-25


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 69..90
None	No IPR available	PANTHER	PTHR23111	ZINC FINGER PROTEIN	coord: 82..271
None	No IPR available	PANTHER	PTHR23111:SF24	OS01G0203300 PROTEIN	coord: 82..271

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
CmoCh09G006530.1	CmoCh09G006530.1	mRNA