CmoCh09G006170 (gene) Cucurbita moschata (Rifu) v1

Overview


Name	CmoCh09G006170
Type	gene
Organism	Cucurbita moschata (Cucurbita moschata (Rifu) v1)
Description	VAN3-binding protein-like isoform X2
Location	Cmo_Chr09: 3084770 .. 3091533 (-)
RNA-Seq Expression	CmoCh09G006170
Synteny	CmoCh09G006170

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonfive_prime_UTRpolypeptideCDS

Hold the cursor over a type above to highlight its positions in the sequence below.

AAATAAGGTGACATTCTTTTTACTACTTGCTTGCTTAGTTCTGTTCAAGATTTGTTACTTTACTTTCTGATAAAGTCGATGAAGAACAGAGATGAGTAGCCATTGCAATCATGAACACAGCCGCTGAGAAACAAATGCACCATCGGCCTTGTAATGGGGTCCTTTCTTTTTATATATGTTTGTGGAATTCGTGCACTCTTTTTGGCTTTCACTTTCCTCGATAAAGTAACAGAATCTCCATACCTCTATTTCATCATTCTCTGTTAAATACCCCAAATGAGGCTCGCTTGTTGCCTCAGGAGCTCACTGAAGGAACAAGTGGTCATGGTCATCTCTCTTAACTCAGACAGTGAAAGTAAGGCCATGCATCCATAGTCACTTCTCTTCACATTACTGTGATCATTGTTTTGGTTAAATGATTACTTGTCTCTGTGTGTGTGTTGTTGCTATGGTTTCAGTGAGTTCATGTTTGGCTAGATGTTCATCAACTCGGCTGGAGAACATAGATGAAAATAGCCCTGCAAATTGGTTGCCGGGTTCGTTTGTTCTACCTGAAACTCCAATTGAGTCCATGGAATTTCTTGGCAGATCTTGGAGCCTGTCTGCCAAAGAGCTCTCTAAGGCTCTTTCCACTGCCCATGATACTCCTAGTCGTCTTCAGAACTCAGTGATTGGCTTTCTTAGTGCTGATGCACATGATTCAAATTCTTCAGTCTTGAGTGAGCCAGTGAGATACCTCTTCCTCCTCTCTTATATTGGAGAGGGGAACAAAACATTCCTTAAAAGAGTGTGGAAACCTTTCCTTAACGGACATGTTTTATAAATCGTGAGACTGATAACGATACGTAACGGGTCAAAGCGGACAATATCTGTTAGCGGTGGGTTTGGGCCATTACAAATGGTAGCAAAGCCAAGCACCGAGTGGCGTGCCAGCGAGAACGCTGGCCTCCCTTGGAGGTGGATTGTAAGATCTCATATCGGTTGGAGAGGGGAACGAAGCATTGCTTATAAGGATGCGGAAATCTCTCCCTAACAAACACGTTTTATAAACCGTGAGGTTGATAACGATACGTAGGCCAAATCCTCCTCCCTTTTTTGATTAATTCTGCTTAATGTTACAGCTACTTCGGCGCTTACCCAGTGGAGATAGTCCTCCAGCTTCACCAAGAGGAAGTGAAGAAATGAAGGTACTTTAATTTGAAGCTGACTGCAGCCCACATTCGAGTACACACACCACCAACACGAATTAGTTTTTGCTGCCTCATTTGTTATATTGGTACAGAGTATCTCTCTGAATTGCACATGCATTCTATTTTGAGTAGGAACTTTTGTTACTTCACCAAGCATTGAATCCAGATTTCCTTTCCAACCAGCAACTACTTGGAAATGGGGTATGTCTCACTCTTACTTCAAAGTACTTGCACATACATGGAAGTATACCTGTAAGATCCCACATTAGTCGAAGAGGAGAACGAAGCTTTCTTTATAAGGGTGTGAAAACCTCTTTCTAGTAGACGCGTTTTAAAATCTTAAGGGAAAGTCCAAAGAGAACATCTCTCCCTAGTAGATGCCTTTTAAAGCCTTAAGGGAAAGCCCAAAAAAGACATCTCTTCCTAGTAGACACGTTTTAAAACCTTAAGGGAAAACCCTAAAGAGAAAGCCCAAAGATGACACCTCTCCCTAGTAGACGCGTTTTAAAACCTTAAGGGAAGGCCCAAAGAAGACACATCTCCCTAATAGACGCGTTTTAAAACCTTAAAGGAAAACCTAAAGAGGATACCTCTCCGTAGTAGACGCATTTTAAAACCTTAGAGGGAGCCCTGGAGGGATTGTTCTTTAGTAGACGCATTTTAAAACCTTAAGGGAAGACCCAAAGAAGACACATCTCCCTAGTAGACGCGTTTTAAAACCTCAAGGGAAAACCCTGAAGGGAAAGCCCAAAGATGACACCTCTCCCTAGTAGACGTGTTTTAAAACTTTAAGGGAAAGCCCAAAGAGGACACCTCTCCCTAGTAGACGCGTTTTAAAACCTTAGGGAAAGCCCTAAAGGGAAAGTCCAAATAGGACAATATCGACTAGCGGTGGGCTTGGGCTTGAGCTTGGTCTGTTACAATACCATATTCATCATTTTTGTTTCTTTGATGCAGCTATACAAGAGCATATTAAGAGGTAATAAAACATTGGGAAGGTGGATGAAGGATCAAAAGGAGAGGAAGAAGCAGGAAATCAGATCACAGAATGCTCAATTACATGCAGCTGTGTCTGTAGCAGGTGTTGCTGCTTCAGTAGCAGCATTCATTGCATCACTCTTATCTTGTGAAACATCATCGGGTAATCACAAATGGCCTTCAAAGACATCATCAGCCATGGCTTCTGCAGCTGCCCTTGTCGCATCTCATTGCATAGAGATGGCAGAGGAAATGGGAGCTAGCCATGAACATATCTTGAATGTAGTTAACTCTGCAATCAATGCTAGAACTAATGGAGATATCATGACCCTAACAGCAGGAGCAGCTACAGGTTGCTTGGAAAAAGCCTCATAATCAGCTAATTTTCACAACTGATGAAGCAAAATCCATAGTACTCTCAAACATTTCTTTATTAACGCAGCTTTAAGAGGAGCTGCAACCTTAAGGTCAAGGCTTGAAAAAGGGTTGGGAGGCACAAACTTTGGAGTGGGTGAGGATAAAGTTGAAGAAGAAGGGAAAGAATCAAACATGTTGATAGCAATCAACCATGTTTCCAGGGGAGGAGAGCTTCTCAAACGCACAAGGAAAGGTATTGGTTAGATCATTTTAACTTGAATATTGTCTCAAATTATCAAATTCTGATGTTTATCCCACTGAGGCTAGAAACATGCTGGTCACAGGGGTTCTCCACTGGAAGCAAGTTTCTTTCAACATAAATTCAAACTGGCAGGTAAGACGAGAAATGGTTGATAGTTGTCAAATTCTCCCTATCCGGAAAGTTATATGTTATTTAAGTTGCTTTTGAAATCTTCTCTCATTCTTACTTTCAAACTCGCTTTCAAAAATTTCTCTGCTCTTGTTTTCTAAAACCTTCCTCCCGAAAGGGGTCAGAGGCTTGAGCATACGTTGCCCGGTCGTAGACGACGCGAATTGTGAGATTCCACATCGATTGGGGAGGAAAACATAGCATCCTTTATAAGGGTGTGGAAACCTCTCCCTAGCATATGTGTTTTTAGAAATTTGAGGGGAAGTCTGGAAGAGAAACCCCAAAGAGGACAATATCGGCTAGTAGTGGACTTGGGCTGTTACAAATGAAAATCAGAACCAGACACCGGGCGATGTACCAGCGAGGAGGCTGAGTCCGGAGTGGACATGAGGTAGTGTGTCAACAAGGGCATTAGGTCCCGAAGGGGTGGATTAGGGGGTCCCACATCAATTGGAGAAGGGAACGAGCATTAGCAAGGACGCTGGGTCCTGAAGGAGGATGGATTGTGAGATCCCACATCGGTTGGGGAGAAGAACAAAGCACCATTTATAAGGGTGTGGAAACTTCTTCCTATCAACGTGTTTTTAAAACCTTGAAGGGAAGCCTGAAAGGAAAAGTCTAAAAAGGACAATATCCGCTAACGATGGACTTAGACTGTTGCACGAATACTAATTGGCTCGACTTACTTGATGTTGGAAGTAAGTCCCGCACAATCGTAAAGTCCACTACCAAGAAAAGTGCGATTGTGACAAGTGTGTCGGGATGATTGACATTTCTATTTAACAATAACAATACAGCAAGTTTCTTTCGTTATACTCTGCTAATCTTCTCTTCATCGTCACTCTTGCAATTGGAAATAAGTATTCAGAAGTAGAATATACGTCTACAGGTTGTGGCAAAATTGAAAAGCAGGCATATGGCAGCAACATTTACAAAGAACAAAAAATGTAAGACAAAGCTTCACTCAAAGAACAAATCATCTTCTCAGTTGCCTACACAACATCTATACTGATGAACCATTTTCTGTTTCAGGCGTAATCTCGGGTGTGAACTGCAACGTTACGGCATGGCCGGGGCGGGAAAGGGAGACGGATAGCGAGCCAAGGGCTTACTTTGGCATTGTAACAACAGATAGAACAATAGAATTTGAATGCAGTGGGAAAGGAGAAAAACAGATGTGGGTTGAGGGGATTCAATATATGATCAACTTTCGTGCCCACTTGAAATGATTCCGACCGCTCTTGCCCTCAATCATGCTTGTCCAGGATGTATTATCCATGGTCGCATATCTGTTCCAAACAACTTTTACTTACTTTCATATTAGATTGACCTTTACTATTCTTGTTGTGTCGGGGTATATGACCAGTCACCATAATCATATCTACACCGGTCAGGGATAAAATGCCCCCAAAATGTAATATAAGAGATGTGAATAGTTATTAGGTTACATGTTATCAAAGTTGTGGTTGTTACTTATTCGTCTCTAACGTTTTCTTTAAAATTCAACGTATTCTCTCGTTCATGTTTTTTAAAATATTTTTCTCAAACGTGGCCCGAGGCTTGACTATACGCGTGCCTGATAATATTGGTTTTTGTAGAGATAATGGGCCTGAGAAGTGAAGGCCCATCTAGACATGGGCCGTTAATGTTGGAGCAAGTTCAAAAAGAGGCCATTGGGTACGATGAATGATGATGTGTACCTCTAGGCAACGACCACGTGTAATTTGTATATATATATGTACATATTATGTTTTTGATTAGTACGGATTCATGAATCTCATGGAGACCTCCAATTTATGGGGAGGTTGAAATGATATTTTGTACCCCGTACAACTCCAATCTTTATGTTGCACACGTAACTCAATACCGACCGCTAATAATGTATAAAATTCGATTGTAAAAATATGTTTCGAGATAAAATAATTACTGTTACGTATCTGTTATAATTTTAACGTATCAGCTGTCACGTCAATTTCGTCGTTTAATTTTTACTGTAGAAAGAGTGATGGAGTTGTTGCGGTGGAGAACGTACTTGCAACGAGTACAAAAAGATGAACCTATTTGATTCGTCTTTACTGCCTAGTAAAAGCTATTGCTTTATGTTGGCAATGGCATGTAGGCTAACATTATTTGTGGACTATAGGTTAACCATAACTAATCTTTTGGTAAGTAAGATTAGTTATAATCTTTTACCATGTTTGGTTTCATCTAGCAAATAAAGGAACGAAGTAGTTAAACCTATGTCATTATGATTTTAAATTAGGTTACAATCGAACTATCGATCCTTATCTCATTGGAACATGAGATGATACTGTCTATTTTGAATATAAGCTTTCGTGTATTTACTTTTAGTTTTCCCGAAAAGTTTCTTACTCATGGAAATAATGTTTAGTTTCCTTACTGAATCGCGGTAACGACCCAAGTCCACTACTAGCTAGCAAATATTGTCTTTTTTGGATTTGTCTTTCAGCCCTCTTTAGACTTTTCCTTTTGGACTTCCCCTCGAGATTTTAATATGCAGAGATTTACACACCCTTATAAAGAATGTTTCGTTCTCCTCTCCACCTGATGTGAGATCTCACAATCCACCTTGAGCCCAGTATCCTCATTGACATTTGTTCCCCTCTTTTATCAAAATGGGACCTCACAATCCACCTCCCTTTTGAGACTCAACGTCCTCACTGACACACTGTCCGATGTCTGGCTCTGATATCATTTGTAACGGTCCAAGTCCACCAATAGCATATATGGTTCTTTTTGGGTTTTCTCTTCCAGACTTCCTCTCAAGGTTTTAAAACACGTATGCTAGGGAGAGGTTTCCACACTCTTATAAATAATGTTTCATTCCCCTCTCTAACTAATAGAATCTCGAGGAGTTAAATGAAGTTATGGGATGGAGAGACAAGGAATGGTAAAATTGGGAGTTTCAAGAAGAAGACGAGTCTTAAATGATAGGTGGGTTAAGATAATTTGTGGAAATGGCAAAAGAGCGTATCTGTAAAGAAGCAAAAATAAATAGGGAGTTGAAAGGGACCACCGCCCCCCCTCTACGCACCTCTTAGGCCAAGCAACAAGTATCAGAAACACCCATTTCTCTCGTGCCCCTCTCTCCACCTTTATACTATAAGACCTTCCACGACCCATTTCCCAATCGATTCACCAAACACTTCCCTCGCCCCAACGCCCCCACAACGCCCCCAACGCCTATCACAATGTCAGCAACACAACCATCGCAAATCACCCAACCATCCTCCTCTGACACCAACGCCCAATCCAACCCCAACAACAAGCGCGTTCGTGATTCCAGCAAGCACCCACTCTACCGCGGCGTAAGAATGCGCGCTTGGGGCAAATGGGTGTCCGAAATCCGCGAGCCTCGCAAGAAATCCCGCATTTGGTTAGGAACCTTCCCCACCCCAGAGATGGCCGCTAGAGCCCACGACGTTGCTGCCTTGTCCATCAAAGGTAATTCCGCTATTCTCAACTTCCCTGAACTCGCTCACTCCCTTCCCCGCCCCGTCTCCTTCGCCCCTCGCGACGTTCAAGCCGCCGCTGCCAAGGCCGCCCACATGGACCCTTTTCAATACTCCACCGACGACTCCGACGAGCTCAGCGAAATCGTCAAGCTGCCTAGTCTCACCACCAATTACCTTAATAACGAGTTCGTCCTCATGGACTCCACCGATGGCTGGGTTTACCCGCCCCCGTGGTTACGAACCATGGACGATTCCAGCTACAACAACAATAACAACAACAACATTATCGACGAAATGGGAATCGGAGACAGTAATTTCTTATGGGATTATTAA

mRNA sequence

AAATAAGGTGACATTCTTTTTACTACTTGCTTGCTTAGTTCTGTTCAAGATTTGTTACTTTACTTTCTGATAAAGTCGATGAAGAACAGAGATGAGTAGCCATTGCAATCATGAACACAGCCGCTGAGAAACAAATGCACCATCGGCCTTGTAATGGGGTCCTTTCTTTTTATATATGTTTGTGGAATTCGTGCACTCTTTTTGGCTTTCACTTTCCTCGATAAAGTAACAGAATCTCCATACCTCTATTTCATCATTCTCTGTTAAATACCCCAAATGAGGCTCGCTTGTTGCCTCAGGAGCTCACTGAAGGAACAAGTGGTCATGGTCATCTCTCTTAACTCAGACAGTGAAATGAGTTCATGTTTGGCTAGATGTTCATCAACTCGGCTGGAGAACATAGATGAAAATAGCCCTGCAAATTGGTTGCCGGGTTCGTTTGTTCTACCTGAAACTCCAATTGAGTCCATGGAATTTCTTGGCAGATCTTGGAGCCTGTCTGCCAAAGAGCTCTCTAAGGCTCTTTCCACTGCCCATGATACTCCTAGTCGTCTTCAGAACTCAGTGATTGGCTTTCTTAGTGCTGATGCACATGATTCAAATTCTTCAGATCAAAAGGAGAGGAAGAAGCAGGAAATCAGATCACAGAATGCTCAATTACATGCAGCTGTGTCTGTAGCAGGTGTTGCTGCTTCAGTAGCAGCATTCATTGCATCACTCTTATCTTGTGAAACATCATCGGGTAATCACAAATGGCCTTCAAAGACATCATCAGCCATGGCTTCTGCAGCTGCCCTTGTCGCATCTCATTGCATAGAGATGGCAGAGGAAATGGGAGCTAGCCATGAACATATCTTGAATGTAGTTAACTCTGCAATCAATGCTAGAACTAATGGAGATATCATGACCCTAACAGCAGGAGCAGCTACAGCTTTAAGAGGAGCTGCAACCTTAAGGTCAAGGCTTGAAAAAGGGTTGGGAGGCACAAACTTTGGAGTGGGTGAGGATAAAGTTGAAGAAGAAGGGAAAGAATCAAACATGTTGATAGCAATCAACCATGTTTCCAGGGGAGGAGAGCTTCTCAAACGCACAAGGAAAGGCGTAATCTCGGGTGTGAACTGCAACGTTACGGCATGGCCGGGGCGGGAAAGGGAGACGGATAGCGAGCCAAGGGCTTACTTTGGCATTGTAACAACAGATAGAACAATAGAATTTGAATGCAGTGGGAAAGGAGAAAAACAGATAAAGAGTGATGGAGTTGTTGCGGTGGAGAACACCTTCCACGACCCATTTCCCAATCGATTCACCAAACACTTCCCTCGCCCCAACGCCCCCACAACGCCCCCAACGCCTATCACAATGTCAGCAACACAACCATCGCAAATCACCCAACCATCCTCCTCTGACACCAACGCCCAATCCAACCCCAACAACAAGCGCGTTCGTGATTCCAGCAAGCACCCACTCTACCGCGGCGTAAGAATGCGCGCTTGGGGCAAATGGGTGTCCGAAATCCGCGAGCCTCGCAAGAAATCCCGCATTTGGTTAGGAACCTTCCCCACCCCAGAGATGGCCGCTAGAGCCCACGACGTTGCTGCCTTGTCCATCAAAGGTAATTCCGCTATTCTCAACTTCCCTGAACTCGCTCACTCCCTTCCCCGCCCCGTCTCCTTCGCCCCTCGCGACGTTCAAGCCGCCGCTGCCAAGGCCGCCCACATGGACCCTTTTCAATACTCCACCGACGACTCCGACGAGCTCAGCGAAATCGTCAAGCTGCCTAGTCTCACCACCAATTACCTTAATAACGAGTTCGTCCTCATGGACTCCACCGATGGCTGGGTTTACCCGCCCCCGTGGTTACGAACCATGGACGATTCCAGCTACAACAACAATAACAACAACAACATTATCGACGAAATGGGAATCGGAGACAGTAATTTCTTATGGGATTATTAA

Coding sequence (CDS)

ATGAGGCTCGCTTGTTGCCTCAGGAGCTCACTGAAGGAACAAGTGGTCATGGTCATCTCTCTTAACTCAGACAGTGAAATGAGTTCATGTTTGGCTAGATGTTCATCAACTCGGCTGGAGAACATAGATGAAAATAGCCCTGCAAATTGGTTGCCGGGTTCGTTTGTTCTACCTGAAACTCCAATTGAGTCCATGGAATTTCTTGGCAGATCTTGGAGCCTGTCTGCCAAAGAGCTCTCTAAGGCTCTTTCCACTGCCCATGATACTCCTAGTCGTCTTCAGAACTCAGTGATTGGCTTTCTTAGTGCTGATGCACATGATTCAAATTCTTCAGATCAAAAGGAGAGGAAGAAGCAGGAAATCAGATCACAGAATGCTCAATTACATGCAGCTGTGTCTGTAGCAGGTGTTGCTGCTTCAGTAGCAGCATTCATTGCATCACTCTTATCTTGTGAAACATCATCGGGTAATCACAAATGGCCTTCAAAGACATCATCAGCCATGGCTTCTGCAGCTGCCCTTGTCGCATCTCATTGCATAGAGATGGCAGAGGAAATGGGAGCTAGCCATGAACATATCTTGAATGTAGTTAACTCTGCAATCAATGCTAGAACTAATGGAGATATCATGACCCTAACAGCAGGAGCAGCTACAGCTTTAAGAGGAGCTGCAACCTTAAGGTCAAGGCTTGAAAAAGGGTTGGGAGGCACAAACTTTGGAGTGGGTGAGGATAAAGTTGAAGAAGAAGGGAAAGAATCAAACATGTTGATAGCAATCAACCATGTTTCCAGGGGAGGAGAGCTTCTCAAACGCACAAGGAAAGGCGTAATCTCGGGTGTGAACTGCAACGTTACGGCATGGCCGGGGCGGGAAAGGGAGACGGATAGCGAGCCAAGGGCTTACTTTGGCATTGTAACAACAGATAGAACAATAGAATTTGAATGCAGTGGGAAAGGAGAAAAACAGATAAAGAGTGATGGAGTTGTTGCGGTGGAGAACACCTTCCACGACCCATTTCCCAATCGATTCACCAAACACTTCCCTCGCCCCAACGCCCCCACAACGCCCCCAACGCCTATCACAATGTCAGCAACACAACCATCGCAAATCACCCAACCATCCTCCTCTGACACCAACGCCCAATCCAACCCCAACAACAAGCGCGTTCGTGATTCCAGCAAGCACCCACTCTACCGCGGCGTAAGAATGCGCGCTTGGGGCAAATGGGTGTCCGAAATCCGCGAGCCTCGCAAGAAATCCCGCATTTGGTTAGGAACCTTCCCCACCCCAGAGATGGCCGCTAGAGCCCACGACGTTGCTGCCTTGTCCATCAAAGGTAATTCCGCTATTCTCAACTTCCCTGAACTCGCTCACTCCCTTCCCCGCCCCGTCTCCTTCGCCCCTCGCGACGTTCAAGCCGCCGCTGCCAAGGCCGCCCACATGGACCCTTTTCAATACTCCACCGACGACTCCGACGAGCTCAGCGAAATCGTCAAGCTGCCTAGTCTCACCACCAATTACCTTAATAACGAGTTCGTCCTCATGGACTCCACCGATGGCTGGGTTTACCCGCCCCCGTGGTTACGAACCATGGACGATTCCAGCTACAACAACAATAACAACAACAACATTATCGACGAAATGGGAATCGGAGACAGTAATTTCTTATGGGATTATTAA

Protein sequence

MRLACCLRSSLKEQVVMVISLNSDSEMSSCLARCSSTRLENIDENSPANWLPGSFVLPETPIESMEFLGRSWSLSAKELSKALSTAHDTPSRLQNSVIGFLSADAHDSNSSDQKERKKQEIRSQNAQLHAAVSVAGVAASVAAFIASLLSCETSSGNHKWPSKTSSAMASAAALVASHCIEMAEEMGASHEHILNVVNSAINARTNGDIMTLTAGAATALRGAATLRSRLEKGLGGTNFGVGEDKVEEEGKESNMLIAINHVSRGGELLKRTRKGVISGVNCNVTAWPGRERETDSEPRAYFGIVTTDRTIEFECSGKGEKQIKSDGVVAVENTFHDPFPNRFTKHFPRPNAPTTPPTPITMSATQPSQITQPSSSDTNAQSNPNNKRVRDSSKHPLYRGVRMRAWGKWVSEIREPRKKSRIWLGTFPTPEMAARAHDVAALSIKGNSAILNFPELAHSLPRPVSFAPRDVQAAAAKAAHMDPFQYSTDDSDELSEIVKLPSLTTNYLNNEFVLMDSTDGWVYPPPWLRTMDDSSYNNNNNNNIIDEMGIGDSNFLWDY

Homology

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BLAST of CmoCh09G006170 vs. ExPASy Swiss-Prot
Match: Q9LYD3 (Dehydration-responsive element-binding protein 3 OS=Arabidopsis thaliana OX=3702 GN=DREB3 PE=2 SV=1)

HSP 1 Score: 204.5 bits (519), Expect = 3.1e-51
Identity = 123/231 (53.25%), Postives = 139/231 (60.17%), Query Frame = 0


Query: 360 ITMSATQPSQITQPSSSDTNAQSNPNNKRVRDSSKHPLYRGVRMRAWGKWVSEIREPRKK 419
           +T      S+    S      QS    KR RDS KHP+YRGVRMR WGKWVSEIREPRKK
Sbjct: 13  VTQLLVPNSESDSVSDKSKAEQSEKKTKRGRDSGKHPVYRGVRMRNWGKWVSEIREPRKK 72

Query: 420 SRIWLGTFPTPEMAARAHDVAALSIKGNSAILNFPELAHSLPRPVSFAPRDVQAAAAKAA 479
           SRIWLGTFPTPEMAARAHDVAALSIKG +AILNFPELA S PRPVS +PRD+Q AA KAA
Sbjct: 73  SRIWLGTFPTPEMAARAHDVAALSIKGTAAILNFPELADSFPRPVSLSPRDIQTAALKAA 132

Query: 480 HMDP---FQYSTD-----------------------DSDELSEIVKLPSLTTNY------ 539
           HM+P   F  ST                        +S+EL EIV+LPSL  +Y      
Sbjct: 133 HMEPTTSFSSSTSSSSSLSSTSSLESLVLVMDLSRTESEELGEIVELPSLGASYDVDSAN 192

Query: 540 LNNEFVLMDSTDGWVYPPPWLRTMDDSSYNNNNNNNIIDEMGIGDSNFLWD 559
           L NEFV  DS D  +YPPPW ++ +D     N  + I    G G S   WD
Sbjct: 193 LGNEFVFYDSVDYCLYPPPWGQSSED-----NYGHGISPNFGHGLS---WD 235

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BLAST of CmoCh09G006170 vs. ExPASy Swiss-Prot
Match: Q39127 (Ethylene-responsive transcription factor TINY OS=Arabidopsis thaliana OX=3702 GN=TINY PE=2 SV=1)

HSP 1 Score: 191.8 bits (486), Expect = 2.1e-47
Identity = 107/191 (56.02%), Postives = 123/191 (64.40%), Query Frame = 0


Query: 368 SQITQPSSSDTNAQSNPNNKR--VRDSSKHPLYRGVRMRAWGKWVSEIREPRKKSRIWLG 427
           S+ T+   +    Q N   K+  V+DS KHP+YRGVR R WGKWVSEIREPRKKSRIWLG
Sbjct: 4   SESTKSWEASAVRQENEEEKKKPVKDSGKHPVYRGVRKRNWGKWVSEIREPRKKSRIWLG 63

Query: 428 TFPTPEMAARAHDVAALSIKGNSAILNFPELAHSLPRPVSFAPRDVQAAAAKAAHMDPFQ 487
           TFP+PEMAARAHDVAALSIKG SAILNFP+LA S PRP S +PRD+Q AA KAAHM+  Q
Sbjct: 64  TFPSPEMAARAHDVAALSIKGASAILNFPDLAGSFPRPSSLSPRDIQVAALKAAHMETSQ 123

Query: 488 ------------------------YSTDDSDELSEIVKLPSLTTNY-----LNNEFVLMD 528
                                    S   S+EL EIV+LPSL ++Y     L NEF+  D
Sbjct: 124 SFSSSSSLTFSSSQSSSSLESLVSSSATGSEELGEIVELPSLGSSYDGLTQLGNEFIFSD 183

[Close]

BLAST of CmoCh09G006170 vs. ExPASy Swiss-Prot
Match: Q9M080 (Ethylene-responsive transcription factor ERF043 OS=Arabidopsis thaliana OX=3702 GN=ERF043 PE=2 SV=1)

HSP 1 Score: 181.8 bits (460), Expect = 2.1e-44
Identity = 104/211 (49.29%), Postives = 132/211 (62.56%), Query Frame = 0


Query: 385 NNKRVRDSSKHPLYRGVRMRAWGKWVSEIREPRKKSRIWLGTFPTPEMAARAHDVAALSI 444
           ++K  ++++K P+YRGVRMR+WGKWVSEIREPRKKSRIWLGTFPT EMA RAHDVAA+SI
Sbjct: 6   SDKEKKENNKQPVYRGVRMRSWGKWVSEIREPRKKSRIWLGTFPTAEMAMRAHDVAAMSI 65

Query: 445 KGNSAILNFPELAHSLPRPVSFAPRDVQAAAAKAAHMD----PFQYSTDD---------- 504
           KG SAILNFPEL+  LPRPVS +PRDV+AAA KAA MD     F+  T+           
Sbjct: 66  KGTSAILNFPELSKLLPRPVSLSPRDVRAAATKAALMDFDTTAFRSDTETSETTTSNKMS 125

Query: 505 ---------------------------SDELSEIVKLPSLTTNY-LNNEFVLMDSTDGWV 554
                                      SD+L EIVKLPSL T+   +NEFV+ DS +  V
Sbjct: 126 ESSESNETVSFSSSSWSSVTSIEESTVSDDLDEIVKLPSLGTSLNESNEFVIFDSLEDLV 185

[Close]

BLAST of CmoCh09G006170 vs. ExPASy Swiss-Prot
Match: Q52QU1 (Ethylene-responsive transcription factor ERF042 OS=Arabidopsis thaliana OX=3702 GN=ERF042 PE=2 SV=1)

HSP 1 Score: 166.0 bits (419), Expect = 1.2e-39
Identity = 106/226 (46.90%), Postives = 132/226 (58.41%), Query Frame = 0


Query: 376 SDTNAQSNPNNKRVRDSSKHPLYRGVRMRAWGKWVSEIREPRKKSRIWLGTFPTPEMAAR 435
           SDT   S    ++ ++     +YRG RMR+WGKWVSEIREPRKKSRIWLGTFPT EMAAR
Sbjct: 7   SDTECSSKKKKEKTKEKG---VYRGARMRSWGKWVSEIREPRKKSRIWLGTFPTAEMAAR 66

Query: 436 AHDVAALSIKGNSAILNFPELAHSLPRPVSFAPRDVQAAAAKAAHMD----PFQYSTDD- 495
           AHDVAALSIKG+SAILNFPELA  LPRPVS + +D+QAAAA+AA MD    PF    D  
Sbjct: 67  AHDVAALSIKGSSAILNFPELADFLPRPVSLSQQDIQAAAAEAALMDFKTVPFHLQDDST 126

Query: 496 ------------------------------------SDELSEIVKLPSLTTNYLNNEFVL 555
                                               S EL +IV+LPSL  N +  +  L
Sbjct: 127 PLQTRCDTEKIEKWSSSSSSASSSSSSSSSSSSSMLSGELGDIVELPSLENN-VKYDCAL 186

Query: 556 MDSTDGWVYPPPWL-RTMDDSSYNNNNNNNIIDEMGIGDSNFLWDY 560
            DS +G V  PPWL  T +D  Y    +++++ +  + +S FLW+Y
Sbjct: 187 YDSLEGLVSMPPWLDATENDFRY---GDDSVLLDPCLKES-FLWNY 224

[Close]

BLAST of CmoCh09G006170 vs. ExPASy Swiss-Prot
Match: O80654 (Ethylene-responsive transcription factor ERF037 OS=Arabidopsis thaliana OX=3702 GN=ERF037 PE=1 SV=1)

HSP 1 Score: 159.1 bits (401), Expect = 1.5e-37
Identity = 109/237 (45.99%), Postives = 127/237 (53.59%), Query Frame = 0


Query: 362 MSATQPSQITQPSSSDTNAQSNPNNKRVRDSSKHPLYRGVRMRAWGKWVSEIREPRKKSR 421
           +S  Q S + +      + Q +      +     P YRGVRMR WGKWVSEIREPRKKSR
Sbjct: 7   ISVKQSSPVPEEEDHHHHQQDSHRTNTKKRVRSDPGYRGVRMRTWGKWVSEIREPRKKSR 66

Query: 422 IWLGTFPTPEMAARAHDVAALSIKGNSAILNFPELAHSLPRPVSFAPRDVQAAAAKAAHM 481
           IWLGTF TPEMAARAHD AAL+IKG SA+LNFPELA  LPRP S +PRDVQAAAA AA M
Sbjct: 67  IWLGTFSTPEMAARAHDAAALTIKGTSAVLNFPELATYLPRPASSSPRDVQAAAAVAAAM 126

Query: 482 D-------------------------PFQYST--------------DDSDELSEIVKLPS 541
           D                            YST                ++ELSEIV+LPS
Sbjct: 127 DFSPSSSSLVVSDPTTVIAPAETQLSSSSYSTCTSSSLSPSSEEAASTAEELSEIVELPS 186

Query: 542 LTTNYLN--NEFVLMDSTDGWVYPP--PWLRTMDDSSYNNNNNNNIIDEMGIGDSNF 556
           L T+Y    +EFV +DS     YPP  PW      S Y +++ N I        SNF
Sbjct: 187 LETSYDESLSEFVYVDS----AYPPSSPWYINNCYSFYYHSDENGISMAEPFDSSNF 239

[Close]

BLAST of CmoCh09G006170 vs. ExPASy TrEMBL
Match: A0A6J1F6P8 (VAN3-binding protein-like isoform X2 OS=Cucurbita moschata OX=3662 GN=LOC111442832 PE=4 SV=1)

HSP 1 Score: 575.5 bits (1482), Expect = 2.4e-160
Identity = 323/408 (79.17%), Postives = 326/408 (79.90%), Query Frame = 0


Query: 1   MRLACCLRSSLKEQVVMVISLNSDSEMSSCLARCSSTRLENIDENSPANWLPGSFVLPET 60
           MRLACCLRSSLKEQVVMVISLNSDSEMSSCLARCSSTRLENIDENSPANWLPGSFVLPET
Sbjct: 1   MRLACCLRSSLKEQVVMVISLNSDSEMSSCLARCSSTRLENIDENSPANWLPGSFVLPET 60

Query: 61  PIESMEFLGRSWSLSAKELSKALSTAHDTPSRLQNSVIGFLSADAHDSNSS--------- 120
           PIESMEFLGRSWSLSAKELSKALSTAHDTPSRLQNSVIGFLSADAHDSNSS         
Sbjct: 61  PIESMEFLGRSWSLSAKELSKALSTAHDTPSRLQNSVIGFLSADAHDSNSSVLSEPLLRR 120

Query: 121 -----------------------------------DQKERKKQEIRSQNAQLHAAVSVAG 180
                                              DQKERKKQEIRSQNAQLHAAVSVAG
Sbjct: 121 LPSGDSPPASPRGSEEMKLYKSILRGNKTLGRWMKDQKERKKQEIRSQNAQLHAAVSVAG 180

Query: 181 VAASVAAFIASLLSCETSSGNHKWPSKTSSAMASAAALVASHCIEMAEEMGASHEHILNV 240
           VAASVAAFIASLLSCETSSGNHKWPSKTSSAMASAAALVASHCIEMAEEMGASHEHILNV
Sbjct: 181 VAASVAAFIASLLSCETSSGNHKWPSKTSSAMASAAALVASHCIEMAEEMGASHEHILNV 240

Query: 241 VNSAINARTNGDIMTLTAGAATALRGAATLRSRLEKGLGGTNFGVGEDKVEEEGKESNML 300
           VNSAINARTNGDIMTLTAGAATALRGAATLRSRLEKGLGGTNFGVGEDKVEEEGKESNML
Sbjct: 241 VNSAINARTNGDIMTLTAGAATALRGAATLRSRLEKGLGGTNFGVGEDKVEEEGKESNML 300

Query: 301 IAINHVSRGGELLKRTRKG------------------------------------VISGV 329
           IAINHVSRGGELLKRTRKG                                    VISGV
Sbjct: 301 IAINHVSRGGELLKRTRKGVLHWKQVSFNINSNWQVVAKLKSRHMAATFTKNKKCVISGV 360

[Close]

BLAST of CmoCh09G006170 vs. ExPASy TrEMBL
Match: A0A6J1IFE6 (VAN3-binding protein-like isoform X2 OS=Cucurbita maxima OX=3661 GN=LOC111476750 PE=4 SV=1)

HSP 1 Score: 568.5 bits (1464), Expect = 3.0e-158
Identity = 320/408 (78.43%), Postives = 325/408 (79.66%), Query Frame = 0


Query: 1   MRLACCLRSSLKEQVVMVISLNSDSEMSSCLARCSSTRLENIDENSPANWLPGSFVLPET 60
           MRLAC LRSSLKEQ+VMVISLNSDSEMSSCLARCSSTRLENIDENSPANWLPGSFVLPET
Sbjct: 1   MRLACFLRSSLKEQLVMVISLNSDSEMSSCLARCSSTRLENIDENSPANWLPGSFVLPET 60

Query: 61  PIESMEFLGRSWSLSAKELSKALSTAHDTPSRLQNSVIGFLSADAHDSNSS--------- 120
           PIESMEFLGRSWSLSAKELSKALSTAHDTPSRLQNSVIGFLSADAHDSNSS         
Sbjct: 61  PIESMEFLGRSWSLSAKELSKALSTAHDTPSRLQNSVIGFLSADAHDSNSSVLSEPLLRH 120

Query: 121 -----------------------------------DQKERKKQEIRSQNAQLHAAVSVAG 180
                                              DQKERKKQEIRSQNAQLHAAVSVAG
Sbjct: 121 LPSGDSPPASPRGSEEMKLYKSILRGNKTLGRWMKDQKERKKQEIRSQNAQLHAAVSVAG 180

Query: 181 VAASVAAFIASLLSCETSSGNHKWPSKTSSAMASAAALVASHCIEMAEEMGASHEHILNV 240
           VAASVAAFIASLLSCETSSGNHKWPSKTSSAMASAAALVASHCIEMAEEMGASHEHILNV
Sbjct: 181 VAASVAAFIASLLSCETSSGNHKWPSKTSSAMASAAALVASHCIEMAEEMGASHEHILNV 240

Query: 241 VNSAINARTNGDIMTLTAGAATALRGAATLRSRLEKGLGGTNFGVGEDKVEEEGKESNML 300
           VNSAINARTNGDIMTLTAGAATALRGAATLRSRLEKGLGGTNFGVGEDKVEEEGKESN+L
Sbjct: 241 VNSAINARTNGDIMTLTAGAATALRGAATLRSRLEKGLGGTNFGVGEDKVEEEGKESNIL 300

Query: 301 IAINHVSRGGELLKRTRKG------------------------------------VISGV 329
           IAINHVSRGGELLKRTRKG                                    VISGV
Sbjct: 301 IAINHVSRGGELLKRTRKGVLHWKQVSFNINSNWQVVAKLKSRHMAATFTKNKKCVISGV 360

[Close]

BLAST of CmoCh09G006170 vs. ExPASy TrEMBL
Match: A0A6J1F7G8 (VAN3-binding protein-like isoform X1 OS=Cucurbita moschata OX=3662 GN=LOC111442832 PE=4 SV=1)

HSP 1 Score: 566.6 bits (1459), Expect = 1.1e-157
Identity = 323/431 (74.94%), Postives = 326/431 (75.64%), Query Frame = 0


Query: 1   MRLACCLRSSLKEQVVMVISLNSDSEMSSCLARCSSTRLENIDENSPANWLPGSFVLPET 60
           MRLACCLRSSLKEQVVMVISLNSDSEMSSCLARCSSTRLENIDENSPANWLPGSFVLPET
Sbjct: 1   MRLACCLRSSLKEQVVMVISLNSDSEMSSCLARCSSTRLENIDENSPANWLPGSFVLPET 60

Query: 61  PIESMEFLGRSWSLSAKELSKALSTAHDTPSRLQNSVIGFLSADAHDSNSS--------- 120
           PIESMEFLGRSWSLSAKELSKALSTAHDTPSRLQNSVIGFLSADAHDSNSS         
Sbjct: 61  PIESMEFLGRSWSLSAKELSKALSTAHDTPSRLQNSVIGFLSADAHDSNSSVLSEPLLRR 120

Query: 121 ----------------------------------------------------------DQ 180
                                                                     DQ
Sbjct: 121 LPSGDSPPASPRGSEEMKELLLLHQALNPDFLSNQQLLGNGLYKSILRGNKTLGRWMKDQ 180

Query: 181 KERKKQEIRSQNAQLHAAVSVAGVAASVAAFIASLLSCETSSGNHKWPSKTSSAMASAAA 240
           KERKKQEIRSQNAQLHAAVSVAGVAASVAAFIASLLSCETSSGNHKWPSKTSSAMASAAA
Sbjct: 181 KERKKQEIRSQNAQLHAAVSVAGVAASVAAFIASLLSCETSSGNHKWPSKTSSAMASAAA 240

Query: 241 LVASHCIEMAEEMGASHEHILNVVNSAINARTNGDIMTLTAGAATALRGAATLRSRLEKG 300
           LVASHCIEMAEEMGASHEHILNVVNSAINARTNGDIMTLTAGAATALRGAATLRSRLEKG
Sbjct: 241 LVASHCIEMAEEMGASHEHILNVVNSAINARTNGDIMTLTAGAATALRGAATLRSRLEKG 300

Query: 301 LGGTNFGVGEDKVEEEGKESNMLIAINHVSRGGELLKRTRKG------------------ 329
           LGGTNFGVGEDKVEEEGKESNMLIAINHVSRGGELLKRTRKG                  
Sbjct: 301 LGGTNFGVGEDKVEEEGKESNMLIAINHVSRGGELLKRTRKGVLHWKQVSFNINSNWQVV 360

[Close]

BLAST of CmoCh09G006170 vs. ExPASy TrEMBL
Match: A0A6J1IGK4 (VAN3-binding protein-like isoform X1 OS=Cucurbita maxima OX=3661 GN=LOC111476750 PE=4 SV=1)

HSP 1 Score: 559.7 bits (1441), Expect = 1.4e-155
Identity = 320/431 (74.25%), Postives = 325/431 (75.41%), Query Frame = 0


Query: 1   MRLACCLRSSLKEQVVMVISLNSDSEMSSCLARCSSTRLENIDENSPANWLPGSFVLPET 60
           MRLAC LRSSLKEQ+VMVISLNSDSEMSSCLARCSSTRLENIDENSPANWLPGSFVLPET
Sbjct: 1   MRLACFLRSSLKEQLVMVISLNSDSEMSSCLARCSSTRLENIDENSPANWLPGSFVLPET 60

Query: 61  PIESMEFLGRSWSLSAKELSKALSTAHDTPSRLQNSVIGFLSADAHDSNSS--------- 120
           PIESMEFLGRSWSLSAKELSKALSTAHDTPSRLQNSVIGFLSADAHDSNSS         
Sbjct: 61  PIESMEFLGRSWSLSAKELSKALSTAHDTPSRLQNSVIGFLSADAHDSNSSVLSEPLLRH 120

Query: 121 ----------------------------------------------------------DQ 180
                                                                     DQ
Sbjct: 121 LPSGDSPPASPRGSEEMKELLLLHQALNPDFLSNQQLLGNGLYKSILRGNKTLGRWMKDQ 180

Query: 181 KERKKQEIRSQNAQLHAAVSVAGVAASVAAFIASLLSCETSSGNHKWPSKTSSAMASAAA 240
           KERKKQEIRSQNAQLHAAVSVAGVAASVAAFIASLLSCETSSGNHKWPSKTSSAMASAAA
Sbjct: 181 KERKKQEIRSQNAQLHAAVSVAGVAASVAAFIASLLSCETSSGNHKWPSKTSSAMASAAA 240

Query: 241 LVASHCIEMAEEMGASHEHILNVVNSAINARTNGDIMTLTAGAATALRGAATLRSRLEKG 300
           LVASHCIEMAEEMGASHEHILNVVNSAINARTNGDIMTLTAGAATALRGAATLRSRLEKG
Sbjct: 241 LVASHCIEMAEEMGASHEHILNVVNSAINARTNGDIMTLTAGAATALRGAATLRSRLEKG 300

Query: 301 LGGTNFGVGEDKVEEEGKESNMLIAINHVSRGGELLKRTRKG------------------ 329
           LGGTNFGVGEDKVEEEGKESN+LIAINHVSRGGELLKRTRKG                  
Sbjct: 301 LGGTNFGVGEDKVEEEGKESNILIAINHVSRGGELLKRTRKGVLHWKQVSFNINSNWQVV 360

[Close]

BLAST of CmoCh09G006170 vs. ExPASy TrEMBL
Match: A0A6J1FCG2 (VAN3-binding protein-like isoform X3 OS=Cucurbita moschata OX=3662 GN=LOC111442832 PE=4 SV=1)

HSP 1 Score: 479.6 bits (1233), Expect = 1.8e-131
Identity = 274/341 (80.35%), Postives = 274/341 (80.35%), Query Frame = 0


Query: 1   MRLACCLRSSLKEQVVMVISLNSDSEMSSCLARCSSTRLENIDENSPANWLPGSFVLPET 60
           MRLACCLRSSLKEQVVMVISLNSDSEMSSCLARCSSTRLENIDENSPANWLPGSFVLPET
Sbjct: 1   MRLACCLRSSLKEQVVMVISLNSDSEMSSCLARCSSTRLENIDENSPANWLPGSFVLPET 60

Query: 61  PIESMEFLGRSWSLSAKELSKALSTAHDTPSRLQNSVIGFLSADAHDSNSS--------- 120
           PIESMEFLGRSWSLSAKELSKALSTAHDTPSRLQNSVIGFLSADAHDSNSS         
Sbjct: 61  PIESMEFLGRSWSLSAKELSKALSTAHDTPSRLQNSVIGFLSADAHDSNSSVLSEPLLRR 120

Query: 121 ----------------------------------------------------------DQ 180
                                                                     DQ
Sbjct: 121 LPSGDSPPASPRGSEEMKELLLLHQALNPDFLSNQQLLGNGLYKSILRGNKTLGRWMKDQ 180

Query: 181 KERKKQEIRSQNAQLHAAVSVAGVAASVAAFIASLLSCETSSGNHKWPSKTSSAMASAAA 240
           KERKKQEIRSQNAQLHAAVSVAGVAASVAAFIASLLSCETSSGNHKWPSKTSSAMASAAA
Sbjct: 181 KERKKQEIRSQNAQLHAAVSVAGVAASVAAFIASLLSCETSSGNHKWPSKTSSAMASAAA 240

Query: 241 LVASHCIEMAEEMGASHEHILNVVNSAINARTNGDIMTLTAGAATALRGAATLRSRLEKG 275
           LVASHCIEMAEEMGASHEHILNVVNSAINARTNGDIMTLTAGAATALRGAATLRSRLEKG
Sbjct: 241 LVASHCIEMAEEMGASHEHILNVVNSAINARTNGDIMTLTAGAATALRGAATLRSRLEKG 300

[Close]

BLAST of CmoCh09G006170 vs. NCBI nr
Match: XP_022936146.1 (VAN3-binding protein-like isoform X2 [Cucurbita moschata])

HSP 1 Score: 575.5 bits (1482), Expect = 5.1e-160
Identity = 323/408 (79.17%), Postives = 326/408 (79.90%), Query Frame = 0


Query: 1   MRLACCLRSSLKEQVVMVISLNSDSEMSSCLARCSSTRLENIDENSPANWLPGSFVLPET 60
           MRLACCLRSSLKEQVVMVISLNSDSEMSSCLARCSSTRLENIDENSPANWLPGSFVLPET
Sbjct: 1   MRLACCLRSSLKEQVVMVISLNSDSEMSSCLARCSSTRLENIDENSPANWLPGSFVLPET 60

Query: 61  PIESMEFLGRSWSLSAKELSKALSTAHDTPSRLQNSVIGFLSADAHDSNSS--------- 120
           PIESMEFLGRSWSLSAKELSKALSTAHDTPSRLQNSVIGFLSADAHDSNSS         
Sbjct: 61  PIESMEFLGRSWSLSAKELSKALSTAHDTPSRLQNSVIGFLSADAHDSNSSVLSEPLLRR 120

Query: 121 -----------------------------------DQKERKKQEIRSQNAQLHAAVSVAG 180
                                              DQKERKKQEIRSQNAQLHAAVSVAG
Sbjct: 121 LPSGDSPPASPRGSEEMKLYKSILRGNKTLGRWMKDQKERKKQEIRSQNAQLHAAVSVAG 180

Query: 181 VAASVAAFIASLLSCETSSGNHKWPSKTSSAMASAAALVASHCIEMAEEMGASHEHILNV 240
           VAASVAAFIASLLSCETSSGNHKWPSKTSSAMASAAALVASHCIEMAEEMGASHEHILNV
Sbjct: 181 VAASVAAFIASLLSCETSSGNHKWPSKTSSAMASAAALVASHCIEMAEEMGASHEHILNV 240

Query: 241 VNSAINARTNGDIMTLTAGAATALRGAATLRSRLEKGLGGTNFGVGEDKVEEEGKESNML 300
           VNSAINARTNGDIMTLTAGAATALRGAATLRSRLEKGLGGTNFGVGEDKVEEEGKESNML
Sbjct: 241 VNSAINARTNGDIMTLTAGAATALRGAATLRSRLEKGLGGTNFGVGEDKVEEEGKESNML 300

Query: 301 IAINHVSRGGELLKRTRKG------------------------------------VISGV 329
           IAINHVSRGGELLKRTRKG                                    VISGV
Sbjct: 301 IAINHVSRGGELLKRTRKGVLHWKQVSFNINSNWQVVAKLKSRHMAATFTKNKKCVISGV 360

[Close]

BLAST of CmoCh09G006170 vs. NCBI nr
Match: XP_022976317.1 (VAN3-binding protein-like isoform X2 [Cucurbita maxima])

HSP 1 Score: 568.5 bits (1464), Expect = 6.2e-158
Identity = 320/408 (78.43%), Postives = 325/408 (79.66%), Query Frame = 0


Query: 1   MRLACCLRSSLKEQVVMVISLNSDSEMSSCLARCSSTRLENIDENSPANWLPGSFVLPET 60
           MRLAC LRSSLKEQ+VMVISLNSDSEMSSCLARCSSTRLENIDENSPANWLPGSFVLPET
Sbjct: 1   MRLACFLRSSLKEQLVMVISLNSDSEMSSCLARCSSTRLENIDENSPANWLPGSFVLPET 60

Query: 61  PIESMEFLGRSWSLSAKELSKALSTAHDTPSRLQNSVIGFLSADAHDSNSS--------- 120
           PIESMEFLGRSWSLSAKELSKALSTAHDTPSRLQNSVIGFLSADAHDSNSS         
Sbjct: 61  PIESMEFLGRSWSLSAKELSKALSTAHDTPSRLQNSVIGFLSADAHDSNSSVLSEPLLRH 120

Query: 121 -----------------------------------DQKERKKQEIRSQNAQLHAAVSVAG 180
                                              DQKERKKQEIRSQNAQLHAAVSVAG
Sbjct: 121 LPSGDSPPASPRGSEEMKLYKSILRGNKTLGRWMKDQKERKKQEIRSQNAQLHAAVSVAG 180

Query: 181 VAASVAAFIASLLSCETSSGNHKWPSKTSSAMASAAALVASHCIEMAEEMGASHEHILNV 240
           VAASVAAFIASLLSCETSSGNHKWPSKTSSAMASAAALVASHCIEMAEEMGASHEHILNV
Sbjct: 181 VAASVAAFIASLLSCETSSGNHKWPSKTSSAMASAAALVASHCIEMAEEMGASHEHILNV 240

Query: 241 VNSAINARTNGDIMTLTAGAATALRGAATLRSRLEKGLGGTNFGVGEDKVEEEGKESNML 300
           VNSAINARTNGDIMTLTAGAATALRGAATLRSRLEKGLGGTNFGVGEDKVEEEGKESN+L
Sbjct: 241 VNSAINARTNGDIMTLTAGAATALRGAATLRSRLEKGLGGTNFGVGEDKVEEEGKESNIL 300

Query: 301 IAINHVSRGGELLKRTRKG------------------------------------VISGV 329
           IAINHVSRGGELLKRTRKG                                    VISGV
Sbjct: 301 IAINHVSRGGELLKRTRKGVLHWKQVSFNINSNWQVVAKLKSRHMAATFTKNKKCVISGV 360

[Close]

BLAST of CmoCh09G006170 vs. NCBI nr
Match: XP_022936144.1 (VAN3-binding protein-like isoform X1 [Cucurbita moschata] >XP_022936145.1 VAN3-binding protein-like isoform X1 [Cucurbita moschata] >KAG6591736.1 VAN3-binding protein, partial [Cucurbita argyrosperma subsp. sororia])

HSP 1 Score: 566.6 bits (1459), Expect = 2.4e-157
Identity = 323/431 (74.94%), Postives = 326/431 (75.64%), Query Frame = 0


Query: 1   MRLACCLRSSLKEQVVMVISLNSDSEMSSCLARCSSTRLENIDENSPANWLPGSFVLPET 60
           MRLACCLRSSLKEQVVMVISLNSDSEMSSCLARCSSTRLENIDENSPANWLPGSFVLPET
Sbjct: 1   MRLACCLRSSLKEQVVMVISLNSDSEMSSCLARCSSTRLENIDENSPANWLPGSFVLPET 60

Query: 61  PIESMEFLGRSWSLSAKELSKALSTAHDTPSRLQNSVIGFLSADAHDSNSS--------- 120
           PIESMEFLGRSWSLSAKELSKALSTAHDTPSRLQNSVIGFLSADAHDSNSS         
Sbjct: 61  PIESMEFLGRSWSLSAKELSKALSTAHDTPSRLQNSVIGFLSADAHDSNSSVLSEPLLRR 120

Query: 121 ----------------------------------------------------------DQ 180
                                                                     DQ
Sbjct: 121 LPSGDSPPASPRGSEEMKELLLLHQALNPDFLSNQQLLGNGLYKSILRGNKTLGRWMKDQ 180

Query: 181 KERKKQEIRSQNAQLHAAVSVAGVAASVAAFIASLLSCETSSGNHKWPSKTSSAMASAAA 240
           KERKKQEIRSQNAQLHAAVSVAGVAASVAAFIASLLSCETSSGNHKWPSKTSSAMASAAA
Sbjct: 181 KERKKQEIRSQNAQLHAAVSVAGVAASVAAFIASLLSCETSSGNHKWPSKTSSAMASAAA 240

Query: 241 LVASHCIEMAEEMGASHEHILNVVNSAINARTNGDIMTLTAGAATALRGAATLRSRLEKG 300
           LVASHCIEMAEEMGASHEHILNVVNSAINARTNGDIMTLTAGAATALRGAATLRSRLEKG
Sbjct: 241 LVASHCIEMAEEMGASHEHILNVVNSAINARTNGDIMTLTAGAATALRGAATLRSRLEKG 300

Query: 301 LGGTNFGVGEDKVEEEGKESNMLIAINHVSRGGELLKRTRKG------------------ 329
           LGGTNFGVGEDKVEEEGKESNMLIAINHVSRGGELLKRTRKG                  
Sbjct: 301 LGGTNFGVGEDKVEEEGKESNMLIAINHVSRGGELLKRTRKGVLHWKQVSFNINSNWQVV 360

[Close]

BLAST of CmoCh09G006170 vs. NCBI nr
Match: XP_022976316.1 (VAN3-binding protein-like isoform X1 [Cucurbita maxima])

HSP 1 Score: 559.7 bits (1441), Expect = 2.9e-155
Identity = 320/431 (74.25%), Postives = 325/431 (75.41%), Query Frame = 0


Query: 1   MRLACCLRSSLKEQVVMVISLNSDSEMSSCLARCSSTRLENIDENSPANWLPGSFVLPET 60
           MRLAC LRSSLKEQ+VMVISLNSDSEMSSCLARCSSTRLENIDENSPANWLPGSFVLPET
Sbjct: 1   MRLACFLRSSLKEQLVMVISLNSDSEMSSCLARCSSTRLENIDENSPANWLPGSFVLPET 60

Query: 61  PIESMEFLGRSWSLSAKELSKALSTAHDTPSRLQNSVIGFLSADAHDSNSS--------- 120
           PIESMEFLGRSWSLSAKELSKALSTAHDTPSRLQNSVIGFLSADAHDSNSS         
Sbjct: 61  PIESMEFLGRSWSLSAKELSKALSTAHDTPSRLQNSVIGFLSADAHDSNSSVLSEPLLRH 120

Query: 121 ----------------------------------------------------------DQ 180
                                                                     DQ
Sbjct: 121 LPSGDSPPASPRGSEEMKELLLLHQALNPDFLSNQQLLGNGLYKSILRGNKTLGRWMKDQ 180

Query: 181 KERKKQEIRSQNAQLHAAVSVAGVAASVAAFIASLLSCETSSGNHKWPSKTSSAMASAAA 240
           KERKKQEIRSQNAQLHAAVSVAGVAASVAAFIASLLSCETSSGNHKWPSKTSSAMASAAA
Sbjct: 181 KERKKQEIRSQNAQLHAAVSVAGVAASVAAFIASLLSCETSSGNHKWPSKTSSAMASAAA 240

Query: 241 LVASHCIEMAEEMGASHEHILNVVNSAINARTNGDIMTLTAGAATALRGAATLRSRLEKG 300
           LVASHCIEMAEEMGASHEHILNVVNSAINARTNGDIMTLTAGAATALRGAATLRSRLEKG
Sbjct: 241 LVASHCIEMAEEMGASHEHILNVVNSAINARTNGDIMTLTAGAATALRGAATLRSRLEKG 300

Query: 301 LGGTNFGVGEDKVEEEGKESNMLIAINHVSRGGELLKRTRKG------------------ 329
           LGGTNFGVGEDKVEEEGKESN+LIAINHVSRGGELLKRTRKG                  
Sbjct: 301 LGGTNFGVGEDKVEEEGKESNILIAINHVSRGGELLKRTRKGVLHWKQVSFNINSNWQVV 360

[Close]

BLAST of CmoCh09G006170 vs. NCBI nr
Match: XP_023535237.1 (VAN3-binding protein-like isoform X2 [Cucurbita pepo subsp. pepo])

HSP 1 Score: 558.5 bits (1438), Expect = 6.4e-155
Identity = 319/431 (74.01%), Postives = 325/431 (75.41%), Query Frame = 0


Query: 1   MRLACCLRSSLKEQVVMVISLNSDSEMSSCLARCSSTRLENIDENSPANWLPGSFVLPET 60
           MRLAC LRSSLKEQ+VMVISLNSDSEMSSCLARCSSTRLENIDENSPANWLPGSFVLPET
Sbjct: 1   MRLACFLRSSLKEQLVMVISLNSDSEMSSCLARCSSTRLENIDENSPANWLPGSFVLPET 60

Query: 61  PIESMEFLGRSWSLSAKELSKALSTAHDTPSRLQNSVIGFLSADAHDSNSS--------- 120
           PIESMEFLGRSWSLSAKELSKALSTAHDTPSRLQNSVIGFLSA+AHDSNSS         
Sbjct: 61  PIESMEFLGRSWSLSAKELSKALSTAHDTPSRLQNSVIGFLSAEAHDSNSSVLSEPLLRR 120

Query: 121 ----------------------------------------------------------DQ 180
                                                                     DQ
Sbjct: 121 LPSGDSPPASPRGSEEMKELLLLHQALNPDFLSNQQLLGNGLYKSILRGNKTLGRWMKDQ 180

Query: 181 KERKKQEIRSQNAQLHAAVSVAGVAASVAAFIASLLSCETSSGNHKWPSKTSSAMASAAA 240
           KERKKQEIRSQNAQLHAAVSVAGVAASVAAFIASLLSCETSSGNHKWPSKTSSAMASAAA
Sbjct: 181 KERKKQEIRSQNAQLHAAVSVAGVAASVAAFIASLLSCETSSGNHKWPSKTSSAMASAAA 240

Query: 241 LVASHCIEMAEEMGASHEHILNVVNSAINARTNGDIMTLTAGAATALRGAATLRSRLEKG 300
           LVASHCIEMAEEMGASHEHILNVVNSAINARTNGDIMTLTAGAATALRGAATLRSRLEKG
Sbjct: 241 LVASHCIEMAEEMGASHEHILNVVNSAINARTNGDIMTLTAGAATALRGAATLRSRLEKG 300

Query: 301 LGGTNFGVGEDKVEEEGKESNMLIAINHVSRGGELLKRTRKG------------------ 329
           LGGTNFGVGEDKVEEEGKESNMLIAINHVSRGGELLKRTRKG                  
Sbjct: 301 LGGTNFGVGEDKVEEEGKESNMLIAINHVSRGGELLKRTRKGVLHWKQVSFNINSNWQVV 360

[Close]

BLAST of CmoCh09G006170 vs. TAIR 10
Match: AT5G11590.1 (Integrase-type DNA-binding superfamily protein )

HSP 1 Score: 204.5 bits (519), Expect = 2.2e-52
Identity = 123/231 (53.25%), Postives = 139/231 (60.17%), Query Frame = 0


Query: 360 ITMSATQPSQITQPSSSDTNAQSNPNNKRVRDSSKHPLYRGVRMRAWGKWVSEIREPRKK 419
           +T      S+    S      QS    KR RDS KHP+YRGVRMR WGKWVSEIREPRKK
Sbjct: 13  VTQLLVPNSESDSVSDKSKAEQSEKKTKRGRDSGKHPVYRGVRMRNWGKWVSEIREPRKK 72

Query: 420 SRIWLGTFPTPEMAARAHDVAALSIKGNSAILNFPELAHSLPRPVSFAPRDVQAAAAKAA 479
           SRIWLGTFPTPEMAARAHDVAALSIKG +AILNFPELA S PRPVS +PRD+Q AA KAA
Sbjct: 73  SRIWLGTFPTPEMAARAHDVAALSIKGTAAILNFPELADSFPRPVSLSPRDIQTAALKAA 132

Query: 480 HMDP---FQYSTD-----------------------DSDELSEIVKLPSLTTNY------ 539
           HM+P   F  ST                        +S+EL EIV+LPSL  +Y      
Sbjct: 133 HMEPTTSFSSSTSSSSSLSSTSSLESLVLVMDLSRTESEELGEIVELPSLGASYDVDSAN 192

Query: 540 LNNEFVLMDSTDGWVYPPPWLRTMDDSSYNNNNNNNIIDEMGIGDSNFLWD 559
           L NEFV  DS D  +YPPPW ++ +D     N  + I    G G S   WD
Sbjct: 193 LGNEFVFYDSVDYCLYPPPWGQSSED-----NYGHGISPNFGHGLS---WD 235

[Close]

BLAST of CmoCh09G006170 vs. TAIR 10
Match: AT5G25810.1 (Integrase-type DNA-binding superfamily protein )

HSP 1 Score: 191.8 bits (486), Expect = 1.5e-48
Identity = 107/191 (56.02%), Postives = 123/191 (64.40%), Query Frame = 0


Query: 368 SQITQPSSSDTNAQSNPNNKR--VRDSSKHPLYRGVRMRAWGKWVSEIREPRKKSRIWLG 427
           S+ T+   +    Q N   K+  V+DS KHP+YRGVR R WGKWVSEIREPRKKSRIWLG
Sbjct: 4   SESTKSWEASAVRQENEEEKKKPVKDSGKHPVYRGVRKRNWGKWVSEIREPRKKSRIWLG 63

Query: 428 TFPTPEMAARAHDVAALSIKGNSAILNFPELAHSLPRPVSFAPRDVQAAAAKAAHMDPFQ 487
           TFP+PEMAARAHDVAALSIKG SAILNFP+LA S PRP S +PRD+Q AA KAAHM+  Q
Sbjct: 64  TFPSPEMAARAHDVAALSIKGASAILNFPDLAGSFPRPSSLSPRDIQVAALKAAHMETSQ 123

Query: 488 ------------------------YSTDDSDELSEIVKLPSLTTNY-----LNNEFVLMD 528
                                    S   S+EL EIV+LPSL ++Y     L NEF+  D
Sbjct: 124 SFSSSSSLTFSSSQSSSSLESLVSSSATGSEELGEIVELPSLGSSYDGLTQLGNEFIFSD 183

[Close]

BLAST of CmoCh09G006170 vs. TAIR 10
Match: AT4G32800.1 (Integrase-type DNA-binding superfamily protein )

HSP 1 Score: 181.8 bits (460), Expect = 1.5e-45
Identity = 104/211 (49.29%), Postives = 132/211 (62.56%), Query Frame = 0


Query: 385 NNKRVRDSSKHPLYRGVRMRAWGKWVSEIREPRKKSRIWLGTFPTPEMAARAHDVAALSI 444
           ++K  ++++K P+YRGVRMR+WGKWVSEIREPRKKSRIWLGTFPT EMA RAHDVAA+SI
Sbjct: 6   SDKEKKENNKQPVYRGVRMRSWGKWVSEIREPRKKSRIWLGTFPTAEMAMRAHDVAAMSI 65

Query: 445 KGNSAILNFPELAHSLPRPVSFAPRDVQAAAAKAAHMD----PFQYSTDD---------- 504
           KG SAILNFPEL+  LPRPVS +PRDV+AAA KAA MD     F+  T+           
Sbjct: 66  KGTSAILNFPELSKLLPRPVSLSPRDVRAAATKAALMDFDTTAFRSDTETSETTTSNKMS 125

Query: 505 ---------------------------SDELSEIVKLPSLTTNY-LNNEFVLMDSTDGWV 554
                                      SD+L EIVKLPSL T+   +NEFV+ DS +  V
Sbjct: 126 ESSESNETVSFSSSSWSSVTSIEESTVSDDLDEIVKLPSLGTSLNESNEFVIFDSLEDLV 185

[Close]

BLAST of CmoCh09G006170 vs. TAIR 10
Match: AT2G25820.1 (Integrase-type DNA-binding superfamily protein )

HSP 1 Score: 166.0 bits (419), Expect = 8.6e-41
Identity = 106/226 (46.90%), Postives = 132/226 (58.41%), Query Frame = 0


Query: 376 SDTNAQSNPNNKRVRDSSKHPLYRGVRMRAWGKWVSEIREPRKKSRIWLGTFPTPEMAAR 435
           SDT   S    ++ ++     +YRG RMR+WGKWVSEIREPRKKSRIWLGTFPT EMAAR
Sbjct: 7   SDTECSSKKKKEKTKEKG---VYRGARMRSWGKWVSEIREPRKKSRIWLGTFPTAEMAAR 66

Query: 436 AHDVAALSIKGNSAILNFPELAHSLPRPVSFAPRDVQAAAAKAAHMD----PFQYSTDD- 495
           AHDVAALSIKG+SAILNFPELA  LPRPVS + +D+QAAAA+AA MD    PF    D  
Sbjct: 67  AHDVAALSIKGSSAILNFPELADFLPRPVSLSQQDIQAAAAEAALMDFKTVPFHLQDDST 126

Query: 496 ------------------------------------SDELSEIVKLPSLTTNYLNNEFVL 555
                                               S EL +IV+LPSL  N +  +  L
Sbjct: 127 PLQTRCDTEKIEKWSSSSSSASSSSSSSSSSSSSMLSGELGDIVELPSLENN-VKYDCAL 186

Query: 556 MDSTDGWVYPPPWL-RTMDDSSYNNNNNNNIIDEMGIGDSNFLWDY 560
            DS +G V  PPWL  T +D  Y    +++++ +  + +S FLW+Y
Sbjct: 187 YDSLEGLVSMPPWLDATENDFRY---GDDSVLLDPCLKES-FLWNY 224

[Close]

BLAST of CmoCh09G006170 vs. TAIR 10
Match: AT1G77200.1 (Integrase-type DNA-binding superfamily protein )

HSP 1 Score: 159.1 bits (401), Expect = 1.1e-38
Identity = 109/237 (45.99%), Postives = 127/237 (53.59%), Query Frame = 0


Query: 362 MSATQPSQITQPSSSDTNAQSNPNNKRVRDSSKHPLYRGVRMRAWGKWVSEIREPRKKSR 421
           +S  Q S + +      + Q +      +     P YRGVRMR WGKWVSEIREPRKKSR
Sbjct: 7   ISVKQSSPVPEEEDHHHHQQDSHRTNTKKRVRSDPGYRGVRMRTWGKWVSEIREPRKKSR 66

Query: 422 IWLGTFPTPEMAARAHDVAALSIKGNSAILNFPELAHSLPRPVSFAPRDVQAAAAKAAHM 481
           IWLGTF TPEMAARAHD AAL+IKG SA+LNFPELA  LPRP S +PRDVQAAAA AA M
Sbjct: 67  IWLGTFSTPEMAARAHDAAALTIKGTSAVLNFPELATYLPRPASSSPRDVQAAAAVAAAM 126

Query: 482 D-------------------------PFQYST--------------DDSDELSEIVKLPS 541
           D                            YST                ++ELSEIV+LPS
Sbjct: 127 DFSPSSSSLVVSDPTTVIAPAETQLSSSSYSTCTSSSLSPSSEEAASTAEELSEIVELPS 186

Query: 542 LTTNYLN--NEFVLMDSTDGWVYPP--PWLRTMDDSSYNNNNNNNIIDEMGIGDSNF 556
           L T+Y    +EFV +DS     YPP  PW      S Y +++ N I        SNF
Sbjct: 187 LETSYDESLSEFVYVDS----AYPPSSPWYINNCYSFYYHSDENGISMAEPFDSSNF 239

The following BLAST results are available for this feature:

BLAST of CmoCh09G006170 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
Q9LYD3	3.1e-51	53.25	Dehydration-responsive element-binding protein 3 OS=Arabidopsis thaliana OX=3702...	[more]
Q39127	2.1e-47	56.02	Ethylene-responsive transcription factor TINY OS=Arabidopsis thaliana OX=3702 GN...	[more]
Q9M080	2.1e-44	49.29	Ethylene-responsive transcription factor ERF043 OS=Arabidopsis thaliana OX=3702 ...	[more]
Q52QU1	1.2e-39	46.90	Ethylene-responsive transcription factor ERF042 OS=Arabidopsis thaliana OX=3702 ...	[more]
O80654	1.5e-37	45.99	Ethylene-responsive transcription factor ERF037 OS=Arabidopsis thaliana OX=3702 ...	[more]

BLAST of CmoCh09G006170 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A6J1F6P8	2.4e-160	79.17	VAN3-binding protein-like isoform X2 OS=Cucurbita moschata OX=3662 GN=LOC1114428...	[more]
A0A6J1IFE6	3.0e-158	78.43	VAN3-binding protein-like isoform X2 OS=Cucurbita maxima OX=3661 GN=LOC111476750...	[more]
A0A6J1F7G8	1.1e-157	74.94	VAN3-binding protein-like isoform X1 OS=Cucurbita moschata OX=3662 GN=LOC1114428...	[more]
A0A6J1IGK4	1.4e-155	74.25	VAN3-binding protein-like isoform X1 OS=Cucurbita maxima OX=3661 GN=LOC111476750...	[more]
A0A6J1FCG2	1.8e-131	80.35	VAN3-binding protein-like isoform X3 OS=Cucurbita moschata OX=3662 GN=LOC1114428...	[more]

BLAST of CmoCh09G006170 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_022936146.1	5.1e-160	79.17	VAN3-binding protein-like isoform X2 [Cucurbita moschata]	[more]
XP_022976317.1	6.2e-158	78.43	VAN3-binding protein-like isoform X2 [Cucurbita maxima]	[more]
XP_022936144.1	2.4e-157	74.94	VAN3-binding protein-like isoform X1 [Cucurbita moschata] >XP_022936145.1 VAN3-b...	[more]
XP_022976316.1	2.9e-155	74.25	VAN3-binding protein-like isoform X1 [Cucurbita maxima]	[more]
XP_023535237.1	6.4e-155	74.01	VAN3-binding protein-like isoform X2 [Cucurbita pepo subsp. pepo]	[more]

BLAST of CmoCh09G006170 vs. TAIR 10


Match Name	E-value	Identity	Description
AT5G11590.1	2.2e-52	53.25	Integrase-type DNA-binding superfamily protein	[more]
AT5G25810.1	1.5e-48	56.02	Integrase-type DNA-binding superfamily protein	[more]
AT4G32800.1	1.5e-45	49.29	Integrase-type DNA-binding superfamily protein	[more]
AT2G25820.1	8.6e-41	46.90	Integrase-type DNA-binding superfamily protein	[more]
AT1G77200.1	1.1e-38	45.99	Integrase-type DNA-binding superfamily protein	[more]

InterPro

Analysis Name: InterPro Annotations of Cucurbita moschata (Rifu) v1
Date Performed: 2021-10-25


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	COILS	Coil	Coil	coord: 111..131
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 104..123
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 358..387
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 339..396
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 108..123
None	No IPR available	PANTHER	PTHR31351:SF2	PHOSPHOINOSITIDE BINDING PROTEIN	coord: 276..329 coord: 112..277
None	No IPR available	PANTHER	PTHR31351:SF2	PHOSPHOINOSITIDE BINDING PROTEIN	coord: 32..91
IPR001471	AP2/ERF domain	PRINTS	PR00367	ETHRSPELEMNT	coord: 420..436 score: 66.52 coord: 398..409 score: 70.15
IPR001471	AP2/ERF domain	SMART	SM00380	rav1_2	coord: 397..460 e-value: 9.7E-37 score: 138.1
IPR001471	AP2/ERF domain	PFAM	PF00847	AP2	coord: 396..446 e-value: 2.1E-13 score: 50.3
IPR001471	AP2/ERF domain	PROSITE	PS51032	AP2_ERF	coord: 397..454 score: 23.327345
IPR001471	AP2/ERF domain	CDD	cd00018	AP2	coord: 396..456 e-value: 1.506E-31 score: 114.291
IPR013666	Pleckstrin-like, plant	PFAM	PF08458	PH_2	coord: 266..328 e-value: 1.1E-8 score: 35.4
IPR008546	Domain of unknown function DUF828	PFAM	PF05703	Auxin_canalis	coord: 58..89 e-value: 1.7E-9 score: 38.0 coord: 111..234 e-value: 7.2E-54 score: 183.4
IPR036955	AP2/ERF domain superfamily	GENE3D	3.30.730.10	AP2/ERF domain	coord: 397..455 e-value: 9.2E-24 score: 85.4
IPR040269	VAN3-binding protein	PANTHER	PTHR31351	EXPRESSED PROTEIN	coord: 276..329 coord: 32..91
IPR040269	VAN3-binding protein	PANTHER	PTHR31351	EXPRESSED PROTEIN	coord: 112..277
IPR016177	DNA-binding domain superfamily	SUPERFAMILY	54171	DNA-binding domain	coord: 397..455

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
CmoCh09G006170.1	CmoCh09G006170.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0006355	regulation of transcription, DNA-templated
cellular_component	GO:0016020	membrane
molecular_function	GO:0003677	DNA binding
molecular_function	GO:0003700	DNA-binding transcription factor activity