CmoCh09G005960 (gene) Cucurbita moschata (Rifu) v1

Overview


Name	CmoCh09G005960
Type	gene
Organism	Cucurbita moschata (Cucurbita moschata (Rifu) v1)
Description	Ubiquitin-fold modifier-conjugating enzyme 1
Location	Cmo_Chr09: 2943897 .. 2946345 (-)
RNA-Seq Expression	CmoCh09G005960
Synteny	CmoCh09G005960

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonfive_prime_UTRpolypeptideCDSthree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

AAGGGATATTTTTCATATTTTATTATTCTGTTTTATAAATAAGACTTGTAAGTTGTAATTCCGAAAATGCCCTCTCTATGAACTTCCAAGAGGCACACAAGGTACCATTCCACTTTGGGAATCAGAACAATCAATCGACGGCCACTAGCCATAAAAGGGAGTTGCAGGAACCGACGCAAGTCGGAATCTCGGTTAGCGTTAGCAGAGAAGAAGTATGGAGGGTTGGGATCCGAATACCAAGTCGACGCTTACCCAAATCCCTCTGCTAACGACGAAAGCCGGGCCCAGAGATGGTGCGCCATGGACGCAGAGGTTGAAGGAGGAGTACAAGGCATTGATCGCTTACACTCAGATGAACAAGTCAAATGACAACGACTGGTTCAGGATATCGGCTGCGAATCCAGAGGGAACACGATGGATCGGAAAGTGCTGGTACATCCACAACCTTCTCAAGTACGAATTCGATCTTCAATTCGATATTCCTGTTACGTATCCGTCCACCGCGCCAGAGCTCGAGCTGCCTGAGCTGGATGGAAAAACACAGAAGGTTTGAGTTCGATCGAATTCGATTGTTTTGAAGAATTTACGTTATTCGTAGTTCAAATTTGGAACTCATTTTGACTGGATGTTGTGAATTATTTCAGATGTATAGAGGCGGAAAGATCTGCTTAACCATTCATTTCAAGCCCCTCTGGGCGAAAAACTGGTAATTTCGCTTATCTTTCTTTAAATGATGGTCTGCTCAGAACTTTTGTGAATTATTTCAGATGTATAAAGGCCTATTATAGAATATTTACTTTGTGTTAGTTTGCAATTAGAAGTTTAAACAGTCTCAGCTTTGGGCACAATGCATGCTTCCTTTGATCCGGGTCTCAACAGGGGTTCTTCCAAATTGTTAACAGTGAACGTCGTATTTTGAATGGAAAACCCATAGGTTCTGATTTCCCAGTTATTCTACTTTGGAACCAGTTTTGTTCGCAATGGAACTTTGTTAGAAATGAGGACTCTCCACGCAAGGGTATGATATTGTCGCCTTCCCCAAAAGGCCTCATACTACGTGGAGATGTATTTCTAACTTATAAATTCATAATCAACTCCTTAATAGCCAATGTGGGACTCCTGTTCCAACAATCTTTAACAATCCTTCCCTCGAACAAAGTGTACTATAGAGCCTCTCCTGAGGCCTATGGGGCCCTCGAACAGCCTCTTCTTAATTGAGGTTCGACTCCTTCTTTGGAGCCGTCGAACAAAGTACACCTTTTGTGTACTTTGTTCGACACTTGAGTCACTTTTAGTGACTCAATTTCGGGGTCCCAACTTCTTTGTTCGACATTTGAGAATTCTGTTGACATGGCTAAGTTAAGGGCGTGGCTCTGATACCATGTTAGGAATCACAACTCTCCACAATAGTATAATATTGTCCACTTTGAACATAAGCTCTCATGGCTTTGCTTTGGGCTTCCTTAAAAGACCTCACATCAATGGAGATGTATTCCTTACTTATAAACTCATGATCAACTCCTTAATTAGCCGACGTGGGACTTCTTTTCCAACAATCCTCAACAAACTTTATCTTTCATGAATCGTGTGGTCGTTTTTAGTTAAACCAATACGTTGAGGATTCAAAACCTTCAAAGTATTACCGTTTTGGGGCTGTTGTTGGGCATTGCACTTTGTTTTCCAGCTTGTTATTGACATGATCTTGGCCTACTGGGTAAAGAAATGGCATGGGATTTATTTTGCAGTCCTAGGTTTGGAATAGCTCACGCTCTTTGTTTGGGACTTGCACCATGGCTTGCTGCTGAGGTTCCAGTTCTAGTCGATTCTGGTATGATCAAGCACAAAGATAACACAACATCAACCAGTGAATCTTAGCAGGTATATAAACTTGTCATGGCCATAAAACTGAAACTTTTGACCTCGTCAATTTCTGGACAATTGGAAAATAAACATTTCAGCTCCCCAATGTTGTAATTTAGAGGTTGTCTTTCGACTTCCCAGCCCACAAAGCAACTGCATACACATAGCTATATATTTTACTGGGATTCAGTTCATAAATGTTGCTACATCAGCTAATCACCTTCTGTTTGCCAGTATTCTCTCTTGGGTTTTCGAGTCGTAGTGTAGTTTGCCTCCAAAAGCGACCCCGAGTGGATCGTGTCGATAATCCTCCTCGTGTAGCCTAACTTGTTCCGGTTACAACTTCCATCGTTGCAGAAGAATGAAGAAAGAAAAAAGGTCTGTGTTAGGACACCACCAAAATGAGTTCAGCTAGTGTAGCTGCATACTTGGACGGGTGCAACCATTATGAACGCTGCTCCAATACAGGCTGAGAATGTTGCCTGCGGCTCGTTTACACCATCCTCGGTTCCAGCCACCTGATTTTGCCACAAGATTTAAGCTCAAAATGGCATAGTTAAGGCCTCATTTGACAACCCTTTAATTTCAG

mRNA sequence

AAGGGATATTTTTCATATTTTATTATTCTGTTTTATAAATAAGACTTGTAAGTTGTAATTCCGAAAATGCCCTCTCTATGAACTTCCAAGAGGCACACAAGGTACCATTCCACTTTGGGAATCAGAACAATCAATCGACGGCCACTAGCCATAAAAGGGAGTTGCAGGAACCGACGCAAGTCGGAATCTCGGTTAGCGTTAGCAGAGAAGAAGTATGGAGGGTTGGGATCCGAATACCAAGTCGACGCTTACCCAAATCCCTCTGCTAACGACGAAAGCCGGGCCCAGAGATGGTGCGCCATGGACGCAGAGGTTGAAGGAGGAGTACAAGGCATTGATCGCTTACACTCAGATGAACAAGTCAAATGACAACGACTGGTTCAGGATATCGGCTGCGAATCCAGAGGGAACACGATGGATCGGAAAGTGCTGGTACATCCACAACCTTCTCAAGTACGAATTCGATCTTCAATTCGATATTCCTGTTACGTATCCGTCCACCGCGCCAGAGCTCGAGCTGCCTGAGCTGGATGGAAAAACACAGAAGATGTATAGAGGCGGAAAGATCTGCTTAACCATTCATTTCAAGCCCCTCTGGGCGAAAAACTGTCCTAGGTTTGGAATAGCTCACGCTCTTTGTTTGGGACTTGCACCATGGCTTGCTGCTGAGGTTCCAGTTCTAGTCGATTCTGGTATGATCAAGCACAAAGATAACACAACATCAACCAGTGAATCTTAGCAGTATTCTCTCTTGGGTTTTCGAGTCGTAGTGTAGTTTGCCTCCAAAAGCGACCCCGAGTGGATCGTGTCGATAATCCTCCTCGTGTAGCCTAACTTGTTCCGGTTACAACTTCCATCGTTGCAGAAGAATGAAGAAAGAAAAAAGGTCTGTGTTAGGACACCACCAAAATGAGTTCAGCTAGTGTAGCTGCATACTTGGACGGGTGCAACCATTATGAACGCTGCTCCAATACAGGCTGAGAATGTTGCCTGCGGCTCGTTTACACCATCCTCGGTTCCAGCCACCTGATTTTGCCACAAGATTTAAGCTCAAAATGGCATAGTTAAGGCCTCATTTGACAACCCTTTAATTTCAG

Coding sequence (CDS)

ATGGAGGGTTGGGATCCGAATACCAAGTCGACGCTTACCCAAATCCCTCTGCTAACGACGAAAGCCGGGCCCAGAGATGGTGCGCCATGGACGCAGAGGTTGAAGGAGGAGTACAAGGCATTGATCGCTTACACTCAGATGAACAAGTCAAATGACAACGACTGGTTCAGGATATCGGCTGCGAATCCAGAGGGAACACGATGGATCGGAAAGTGCTGGTACATCCACAACCTTCTCAAGTACGAATTCGATCTTCAATTCGATATTCCTGTTACGTATCCGTCCACCGCGCCAGAGCTCGAGCTGCCTGAGCTGGATGGAAAAACACAGAAGATGTATAGAGGCGGAAAGATCTGCTTAACCATTCATTTCAAGCCCCTCTGGGCGAAAAACTGTCCTAGGTTTGGAATAGCTCACGCTCTTTGTTTGGGACTTGCACCATGGCTTGCTGCTGAGGTTCCAGTTCTAGTCGATTCTGGTATGATCAAGCACAAAGATAACACAACATCAACCAGTGAATCTTAG

Protein sequence

MEGWDPNTKSTLTQIPLLTTKAGPRDGAPWTQRLKEEYKALIAYTQMNKSNDNDWFRISAANPEGTRWIGKCWYIHNLLKYEFDLQFDIPVTYPSTAPELELPELDGKTQKMYRGGKICLTIHFKPLWAKNCPRFGIAHALCLGLAPWLAAEVPVLVDSGMIKHKDNTTSTSES

Homology

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BLAST of CmoCh09G005960 vs. ExPASy Swiss-Prot
Match: Q9SXC8 (Ubiquitin-fold modifier-conjugating enzyme 1 OS=Arabidopsis thaliana OX=3702 GN=At1g27530 PE=2 SV=1)

HSP 1 Score: 354.0 bits (907), Expect = 9.8e-97
Identity = 155/174 (89.08%), Postives = 169/174 (97.13%), Query Frame = 0


Query: 1   MEGWDPNTKSTLTQIPLLTTKAGPRDGAPWTQRLKEEYKALIAYTQMNKSNDNDWFRISA 60
           MEGWDPNTKSTLT+IPLLTTKAGPRDGA WTQRLKEEYK+LIAYTQMNKSNDNDWFRISA
Sbjct: 1   MEGWDPNTKSTLTRIPLLTTKAGPRDGAAWTQRLKEEYKSLIAYTQMNKSNDNDWFRISA 60

Query: 61  ANPEGTRWIGKCWYIHNLLKYEFDLQFDIPVTYPSTAPELELPELDGKTQKMYRGGKICL 120
           +NPEGTRW GKCWY+HNLLKYEFDLQFDIP+TYP+TAPELELPE+DGKTQKMYRGGKICL
Sbjct: 61  SNPEGTRWTGKCWYVHNLLKYEFDLQFDIPITYPATAPELELPEIDGKTQKMYRGGKICL 120

Query: 121 TIHFKPLWAKNCPRFGIAHALCLGLAPWLAAEVPVLVDSGMIKHKDNTTSTSES 175
           T+HFKPLWAKNCPRFGIAHALCLGLAPWLAAE+P+LVDSG IKHKD+  +++ES
Sbjct: 121 TVHFKPLWAKNCPRFGIAHALCLGLAPWLAAEIPILVDSGAIKHKDDAATSAES 174

[Close]

BLAST of CmoCh09G005960 vs. ExPASy Swiss-Prot
Match: A2Z5S8 (Ubiquitin-fold modifier-conjugating enzyme 1 OS=Oryza sativa subsp. indica OX=39946 GN=OsI_33008 PE=3 SV=1)

HSP 1 Score: 313.2 bits (801), Expect = 1.9e-84
Identity = 136/174 (78.16%), Postives = 153/174 (87.93%), Query Frame = 0


Query: 1   MEGWDPNTKSTLTQIPLLTTKAGPRDGAPWTQRLKEEYKALIAYTQMNKSNDNDWFRISA 60
           MEGWD  TKS + +IPLL+T+AGPRDG  W QRLKEEY+ALIAYT +NKS DNDWFRISA
Sbjct: 1   MEGWDKGTKSVVGEIPLLSTRAGPRDGEAWRQRLKEEYRALIAYTSVNKSKDNDWFRISA 60

Query: 61  ANPEGTRWIGKCWYIHNLLKYEFDLQFDIPVTYPSTAPELELPELDGKTQKMYRGGKICL 120
           ANPEGTRW G CWY+HNL +YEF LQFDIPV YP  APE+ELP LDGKT KMYRGGKICL
Sbjct: 61  ANPEGTRWEGTCWYVHNLRRYEFPLQFDIPVAYPQVAPEIELPTLDGKTHKMYRGGKICL 120

Query: 121 TIHFKPLWAKNCPRFGIAHALCLGLAPWLAAEVPVLVDSGMIKHKDNTTSTSES 175
           T+HFKPLWAKNCPRFGIAHALCLGLAPWLAAEVP+LVDSGM+KHKD+  + +++
Sbjct: 121 TVHFKPLWAKNCPRFGIAHALCLGLAPWLAAEVPILVDSGMVKHKDDEAAPADA 174

[Close]

BLAST of CmoCh09G005960 vs. ExPASy Swiss-Prot
Match: Q8S625 (Ubiquitin-fold modifier-conjugating enzyme 1 OS=Oryza sativa subsp. japonica OX=39947 GN=Os10g0205200 PE=2 SV=1)

HSP 1 Score: 313.2 bits (801), Expect = 1.9e-84
Identity = 136/174 (78.16%), Postives = 153/174 (87.93%), Query Frame = 0


Query: 1   MEGWDPNTKSTLTQIPLLTTKAGPRDGAPWTQRLKEEYKALIAYTQMNKSNDNDWFRISA 60
           MEGWD  TKS + +IPLL+T+AGPRDG  W QRLKEEY+ALIAYT +NKS DNDWFRISA
Sbjct: 1   MEGWDKGTKSVVGEIPLLSTRAGPRDGEAWRQRLKEEYRALIAYTSVNKSKDNDWFRISA 60

Query: 61  ANPEGTRWIGKCWYIHNLLKYEFDLQFDIPVTYPSTAPELELPELDGKTQKMYRGGKICL 120
           ANPEGTRW G CWY+HNL +YEF LQFDIPV YP  APE+ELP LDGKT KMYRGGKICL
Sbjct: 61  ANPEGTRWEGTCWYVHNLRRYEFPLQFDIPVAYPQVAPEIELPTLDGKTHKMYRGGKICL 120

Query: 121 TIHFKPLWAKNCPRFGIAHALCLGLAPWLAAEVPVLVDSGMIKHKDNTTSTSES 175
           T+HFKPLWAKNCPRFGIAHALCLGLAPWLAAEVP+LVDSGM+KHKD+  + +++
Sbjct: 121 TVHFKPLWAKNCPRFGIAHALCLGLAPWLAAEVPILVDSGMVKHKDDEAAPADA 174

[Close]

BLAST of CmoCh09G005960 vs. ExPASy Swiss-Prot
Match: Q1ZXC9 (Ubiquitin-fold modifier-conjugating enzyme 1 OS=Dictyostelium discoideum OX=44689 GN=ufc1 PE=3 SV=1)

HSP 1 Score: 269.6 bits (688), Expect = 2.4e-71
Identity = 120/163 (73.62%), Postives = 138/163 (84.66%), Query Frame = 0


Query: 5   DPNTKSTLTQIPLLTTKAGPRDGAPWTQRLKEEYKALIAYTQMNKSNDNDWFRISAANPE 64
           D +TK T+ QIPLLT KAGPRDG  W  RLKEEY+ALI Y ++NK  DNDWF I  +NP 
Sbjct: 2   DNHTKQTVQQIPLLTVKAGPRDGDKWIDRLKEEYQALIKYVEINKKADNDWFNIE-SNPL 61

Query: 65  GTRWIGKCWYIHNLLKYEFDLQFDIPVTYPSTAPELELPELDGKTQKMYRGGKICLTIHF 124
           GTRW GKCWYI+N  KYEFDL+FD+PVTYP TAPE+ +PELDGKT+KMYRGGKICLTIHF
Sbjct: 62  GTRWQGKCWYIYNFKKYEFDLEFDMPVTYPETAPEIAIPELDGKTEKMYRGGKICLTIHF 121

Query: 125 KPLWAKNCPRFGIAHALCLGLAPWLAAEVPVLVDSGMIKHKDN 168
           KPLW++N P FGIAHAL LGLAPWLAAEVP LVD+G+IKHK++
Sbjct: 122 KPLWSRNVPHFGIAHALALGLAPWLAAEVPHLVDNGIIKHKED 163

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BLAST of CmoCh09G005960 vs. ExPASy Swiss-Prot
Match: A7SM54 (Ubiquitin-fold modifier-conjugating enzyme 1 OS=Nematostella vectensis OX=45351 GN=v1g214407 PE=3 SV=1)

HSP 1 Score: 267.3 bits (682), Expect = 1.2e-70
Identity = 117/167 (70.06%), Postives = 134/167 (80.24%), Query Frame = 0


Query: 5   DPNTKSTLTQIPLLTTKAGPRDGAPWTQRLKEEYKALIAYTQMNKSNDNDWFRISAANPE 64
           D  TK TL  IPLL TKAGPRDG  W  RLKEEY +LI Y   NK  DNDWFR+  +N E
Sbjct: 3   DEATKKTLAAIPLLKTKAGPRDGKDWVDRLKEEYTSLIKYVSNNKEADNDWFRLE-SNKE 62

Query: 65  GTRWIGKCWYIHNLLKYEFDLQFDIPVTYPSTAPELELPELDGKTQKMYRGGKICLTIHF 124
           GTRW GKCWYIHNLLKYEFD++FDIP+TYP+TAPE+ LPELDGKT KMYRGGKIC+T HF
Sbjct: 63  GTRWFGKCWYIHNLLKYEFDVEFDIPITYPTTAPEIALPELDGKTAKMYRGGKICMTDHF 122

Query: 125 KPLWAKNCPRFGIAHALCLGLAPWLAAEVPVLVDSGMIKHKDNTTST 172
           KPLW +N PRFGIAHA+ LGL PWLA E+P L++ G+IKHKD + S+
Sbjct: 123 KPLWGRNVPRFGIAHAMALGLGPWLAVEIPDLIEKGLIKHKDKSESS 168

[Close]

BLAST of CmoCh09G005960 vs. ExPASy TrEMBL
Match: A0A6J1FGK7 (Ubiquitin-fold modifier-conjugating enzyme 1 OS=Cucurbita moschata OX=3662 GN=LOC111443717 PE=3 SV=1)

HSP 1 Score: 378.6 bits (971), Expect = 1.4e-101
Identity = 174/174 (100.00%), Postives = 174/174 (100.00%), Query Frame = 0


Query: 1   MEGWDPNTKSTLTQIPLLTTKAGPRDGAPWTQRLKEEYKALIAYTQMNKSNDNDWFRISA 60
           MEGWDPNTKSTLTQIPLLTTKAGPRDGAPWTQRLKEEYKALIAYTQMNKSNDNDWFRISA
Sbjct: 1   MEGWDPNTKSTLTQIPLLTTKAGPRDGAPWTQRLKEEYKALIAYTQMNKSNDNDWFRISA 60

Query: 61  ANPEGTRWIGKCWYIHNLLKYEFDLQFDIPVTYPSTAPELELPELDGKTQKMYRGGKICL 120
           ANPEGTRWIGKCWYIHNLLKYEFDLQFDIPVTYPSTAPELELPELDGKTQKMYRGGKICL
Sbjct: 61  ANPEGTRWIGKCWYIHNLLKYEFDLQFDIPVTYPSTAPELELPELDGKTQKMYRGGKICL 120

Query: 121 TIHFKPLWAKNCPRFGIAHALCLGLAPWLAAEVPVLVDSGMIKHKDNTTSTSES 175
           TIHFKPLWAKNCPRFGIAHALCLGLAPWLAAEVPVLVDSGMIKHKDNTTSTSES
Sbjct: 121 TIHFKPLWAKNCPRFGIAHALCLGLAPWLAAEVPVLVDSGMIKHKDNTTSTSES 174

[Close]

BLAST of CmoCh09G005960 vs. ExPASy TrEMBL
Match: A0A5D3E6S1 (Ubiquitin-fold modifier-conjugating enzyme 1 OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold455G005300 PE=3 SV=1)

HSP 1 Score: 373.2 bits (957), Expect = 5.7e-100
Identity = 171/174 (98.28%), Postives = 173/174 (99.43%), Query Frame = 0


Query: 1   MEGWDPNTKSTLTQIPLLTTKAGPRDGAPWTQRLKEEYKALIAYTQMNKSNDNDWFRISA 60
           MEGWDPNTKSTLTQIPLLTTKAGPRDGA WTQRLKEEYKALIAYTQMNKSNDNDWFRISA
Sbjct: 1   MEGWDPNTKSTLTQIPLLTTKAGPRDGAAWTQRLKEEYKALIAYTQMNKSNDNDWFRISA 60

Query: 61  ANPEGTRWIGKCWYIHNLLKYEFDLQFDIPVTYPSTAPELELPELDGKTQKMYRGGKICL 120
           ANPEGTRWIGKCWYIHNLLKYEFDLQFDIPVTYPSTAPELELPELDGKTQKMYRGGKICL
Sbjct: 61  ANPEGTRWIGKCWYIHNLLKYEFDLQFDIPVTYPSTAPELELPELDGKTQKMYRGGKICL 120

Query: 121 TIHFKPLWAKNCPRFGIAHALCLGLAPWLAAEVPVLVDSGMIKHKDNTTSTSES 175
           TIHFKPLWAKNCPRFGIAHALCLGLAPWLAAEVP+LVDSGMIKHKD+TTSTSES
Sbjct: 121 TIHFKPLWAKNCPRFGIAHALCLGLAPWLAAEVPILVDSGMIKHKDDTTSTSES 174

[Close]

BLAST of CmoCh09G005960 vs. ExPASy TrEMBL
Match: A0A0A0LHR4 (Ubiquitin-fold modifier-conjugating enzyme 1 OS=Cucumis sativus OX=3659 GN=Csa_3G893420 PE=3 SV=1)

HSP 1 Score: 373.2 bits (957), Expect = 5.7e-100
Identity = 171/174 (98.28%), Postives = 173/174 (99.43%), Query Frame = 0


Query: 1   MEGWDPNTKSTLTQIPLLTTKAGPRDGAPWTQRLKEEYKALIAYTQMNKSNDNDWFRISA 60
           MEGWDPNTKSTLTQIPLLTTKAGPRDGA WTQRLKEEYKALIAYTQMNKSNDNDWFRISA
Sbjct: 1   MEGWDPNTKSTLTQIPLLTTKAGPRDGAAWTQRLKEEYKALIAYTQMNKSNDNDWFRISA 60

Query: 61  ANPEGTRWIGKCWYIHNLLKYEFDLQFDIPVTYPSTAPELELPELDGKTQKMYRGGKICL 120
           ANPEGTRWIGKCWYIHNLLKYEFDLQFDIPVTYPSTAPELELPELDGKTQKMYRGGKICL
Sbjct: 61  ANPEGTRWIGKCWYIHNLLKYEFDLQFDIPVTYPSTAPELELPELDGKTQKMYRGGKICL 120

Query: 121 TIHFKPLWAKNCPRFGIAHALCLGLAPWLAAEVPVLVDSGMIKHKDNTTSTSES 175
           TIHFKPLWAKNCPRFGIAHALCLGLAPWLAAEVP+LVDSGMIKHKD+TTSTSES
Sbjct: 121 TIHFKPLWAKNCPRFGIAHALCLGLAPWLAAEVPILVDSGMIKHKDDTTSTSES 174

[Close]

BLAST of CmoCh09G005960 vs. ExPASy TrEMBL
Match: A0A1S3CRV9 (Ubiquitin-fold modifier-conjugating enzyme 1 OS=Cucumis melo OX=3656 GN=LOC103503631 PE=3 SV=1)

HSP 1 Score: 373.2 bits (957), Expect = 5.7e-100
Identity = 171/174 (98.28%), Postives = 173/174 (99.43%), Query Frame = 0


Query: 1   MEGWDPNTKSTLTQIPLLTTKAGPRDGAPWTQRLKEEYKALIAYTQMNKSNDNDWFRISA 60
           MEGWDPNTKSTLTQIPLLTTKAGPRDGA WTQRLKEEYKALIAYTQMNKSNDNDWFRISA
Sbjct: 1   MEGWDPNTKSTLTQIPLLTTKAGPRDGAAWTQRLKEEYKALIAYTQMNKSNDNDWFRISA 60

Query: 61  ANPEGTRWIGKCWYIHNLLKYEFDLQFDIPVTYPSTAPELELPELDGKTQKMYRGGKICL 120
           ANPEGTRWIGKCWYIHNLLKYEFDLQFDIPVTYPSTAPELELPELDGKTQKMYRGGKICL
Sbjct: 61  ANPEGTRWIGKCWYIHNLLKYEFDLQFDIPVTYPSTAPELELPELDGKTQKMYRGGKICL 120

Query: 121 TIHFKPLWAKNCPRFGIAHALCLGLAPWLAAEVPVLVDSGMIKHKDNTTSTSES 175
           TIHFKPLWAKNCPRFGIAHALCLGLAPWLAAEVP+LVDSGMIKHKD+TTSTSES
Sbjct: 121 TIHFKPLWAKNCPRFGIAHALCLGLAPWLAAEVPILVDSGMIKHKDDTTSTSES 174

[Close]

BLAST of CmoCh09G005960 vs. ExPASy TrEMBL
Match: A0A6J1IYE2 (Ubiquitin-fold modifier-conjugating enzyme 1 OS=Cucurbita maxima OX=3661 GN=LOC111480320 PE=3 SV=1)

HSP 1 Score: 370.5 bits (950), Expect = 3.7e-99
Identity = 169/174 (97.13%), Postives = 172/174 (98.85%), Query Frame = 0


Query: 1   MEGWDPNTKSTLTQIPLLTTKAGPRDGAPWTQRLKEEYKALIAYTQMNKSNDNDWFRISA 60
           MEGWDPNTKSTLTQIPLLTTKAGPRDGA WTQRLKEEYKALIAYTQMNKSNDNDWFRISA
Sbjct: 1   MEGWDPNTKSTLTQIPLLTTKAGPRDGAAWTQRLKEEYKALIAYTQMNKSNDNDWFRISA 60

Query: 61  ANPEGTRWIGKCWYIHNLLKYEFDLQFDIPVTYPSTAPELELPELDGKTQKMYRGGKICL 120
           ANPEGTRWIGKCWY+HNLLKYEFDLQFDIP+TYPSTAPELELPELDGKTQKMYRGGKICL
Sbjct: 61  ANPEGTRWIGKCWYVHNLLKYEFDLQFDIPITYPSTAPELELPELDGKTQKMYRGGKICL 120

Query: 121 TIHFKPLWAKNCPRFGIAHALCLGLAPWLAAEVPVLVDSGMIKHKDNTTSTSES 175
           TIHFKPLWAKN PRFGIAHALCLGLAPWLAAEVP+LVDSGMIKHKDNTTSTSES
Sbjct: 121 TIHFKPLWAKNSPRFGIAHALCLGLAPWLAAEVPILVDSGMIKHKDNTTSTSES 174

[Close]

BLAST of CmoCh09G005960 vs. NCBI nr
Match: XP_022937420.1 (ubiquitin-fold modifier-conjugating enzyme 1-like [Cucurbita moschata] >XP_022937421.1 ubiquitin-fold modifier-conjugating enzyme 1-like [Cucurbita moschata] >KAG6591712.1 Ubiquitin-fold modifier-conjugating enzyme 1, partial [Cucurbita argyrosperma subsp. sororia])

HSP 1 Score: 378.6 bits (971), Expect = 2.8e-101
Identity = 174/174 (100.00%), Postives = 174/174 (100.00%), Query Frame = 0


Query: 1   MEGWDPNTKSTLTQIPLLTTKAGPRDGAPWTQRLKEEYKALIAYTQMNKSNDNDWFRISA 60
           MEGWDPNTKSTLTQIPLLTTKAGPRDGAPWTQRLKEEYKALIAYTQMNKSNDNDWFRISA
Sbjct: 1   MEGWDPNTKSTLTQIPLLTTKAGPRDGAPWTQRLKEEYKALIAYTQMNKSNDNDWFRISA 60

Query: 61  ANPEGTRWIGKCWYIHNLLKYEFDLQFDIPVTYPSTAPELELPELDGKTQKMYRGGKICL 120
           ANPEGTRWIGKCWYIHNLLKYEFDLQFDIPVTYPSTAPELELPELDGKTQKMYRGGKICL
Sbjct: 61  ANPEGTRWIGKCWYIHNLLKYEFDLQFDIPVTYPSTAPELELPELDGKTQKMYRGGKICL 120

Query: 121 TIHFKPLWAKNCPRFGIAHALCLGLAPWLAAEVPVLVDSGMIKHKDNTTSTSES 175
           TIHFKPLWAKNCPRFGIAHALCLGLAPWLAAEVPVLVDSGMIKHKDNTTSTSES
Sbjct: 121 TIHFKPLWAKNCPRFGIAHALCLGLAPWLAAEVPVLVDSGMIKHKDNTTSTSES 174

[Close]

BLAST of CmoCh09G005960 vs. NCBI nr
Match: XP_004136240.1 (ubiquitin-fold modifier-conjugating enzyme 1 [Cucumis sativus] >XP_008466109.1 PREDICTED: ubiquitin-fold modifier-conjugating enzyme 1 isoform X1 [Cucumis melo] >KAA0038640.1 ubiquitin-fold modifier-conjugating enzyme 1 [Cucumis melo var. makuwa] >KGN60292.1 hypothetical protein Csa_002028 [Cucumis sativus] >TYK31241.1 ubiquitin-fold modifier-conjugating enzyme 1 [Cucumis melo var. makuwa])

HSP 1 Score: 373.2 bits (957), Expect = 1.2e-99
Identity = 171/174 (98.28%), Postives = 173/174 (99.43%), Query Frame = 0


Query: 1   MEGWDPNTKSTLTQIPLLTTKAGPRDGAPWTQRLKEEYKALIAYTQMNKSNDNDWFRISA 60
           MEGWDPNTKSTLTQIPLLTTKAGPRDGA WTQRLKEEYKALIAYTQMNKSNDNDWFRISA
Sbjct: 1   MEGWDPNTKSTLTQIPLLTTKAGPRDGAAWTQRLKEEYKALIAYTQMNKSNDNDWFRISA 60

Query: 61  ANPEGTRWIGKCWYIHNLLKYEFDLQFDIPVTYPSTAPELELPELDGKTQKMYRGGKICL 120
           ANPEGTRWIGKCWYIHNLLKYEFDLQFDIPVTYPSTAPELELPELDGKTQKMYRGGKICL
Sbjct: 61  ANPEGTRWIGKCWYIHNLLKYEFDLQFDIPVTYPSTAPELELPELDGKTQKMYRGGKICL 120

Query: 121 TIHFKPLWAKNCPRFGIAHALCLGLAPWLAAEVPVLVDSGMIKHKDNTTSTSES 175
           TIHFKPLWAKNCPRFGIAHALCLGLAPWLAAEVP+LVDSGMIKHKD+TTSTSES
Sbjct: 121 TIHFKPLWAKNCPRFGIAHALCLGLAPWLAAEVPILVDSGMIKHKDDTTSTSES 174

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BLAST of CmoCh09G005960 vs. NCBI nr
Match: XP_038896748.1 (ubiquitin-fold modifier-conjugating enzyme 1 [Benincasa hispida])

HSP 1 Score: 373.2 bits (957), Expect = 1.2e-99
Identity = 171/174 (98.28%), Postives = 172/174 (98.85%), Query Frame = 0


Query: 1   MEGWDPNTKSTLTQIPLLTTKAGPRDGAPWTQRLKEEYKALIAYTQMNKSNDNDWFRISA 60
           MEGWDPNTKSTLTQIPLLTTKAGPRDGA WTQRLKEEYKALIAYTQMNKSNDNDWFRISA
Sbjct: 1   MEGWDPNTKSTLTQIPLLTTKAGPRDGAAWTQRLKEEYKALIAYTQMNKSNDNDWFRISA 60

Query: 61  ANPEGTRWIGKCWYIHNLLKYEFDLQFDIPVTYPSTAPELELPELDGKTQKMYRGGKICL 120
           ANPEGTRW GKCWYIHNLLKYEFDLQFDIPVTYPSTAPELELPELDGKTQKMYRGGKICL
Sbjct: 61  ANPEGTRWTGKCWYIHNLLKYEFDLQFDIPVTYPSTAPELELPELDGKTQKMYRGGKICL 120

Query: 121 TIHFKPLWAKNCPRFGIAHALCLGLAPWLAAEVPVLVDSGMIKHKDNTTSTSES 175
           TIHFKPLWAKNCPRFGIAHALCLGLAPWLAAEVP+LVDSGMIKHKDNTTSTSES
Sbjct: 121 TIHFKPLWAKNCPRFGIAHALCLGLAPWLAAEVPILVDSGMIKHKDNTTSTSES 174

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BLAST of CmoCh09G005960 vs. NCBI nr
Match: XP_023535437.1 (ubiquitin-fold modifier-conjugating enzyme 1-like [Cucurbita pepo subsp. pepo] >XP_023535439.1 ubiquitin-fold modifier-conjugating enzyme 1-like [Cucurbita pepo subsp. pepo])

HSP 1 Score: 372.1 bits (954), Expect = 2.6e-99
Identity = 173/174 (99.43%), Postives = 173/174 (99.43%), Query Frame = 0


Query: 1   MEGWDPNTKSTLTQIPLLTTKAGPRDGAPWTQRLKEEYKALIAYTQMNKSNDNDWFRISA 60
           MEGWDPNTKSTLTQIPLLTTKAGPRDGAPWTQRLKEEYKALIAYTQMNKSNDNDWFRISA
Sbjct: 1   MEGWDPNTKSTLTQIPLLTTKAGPRDGAPWTQRLKEEYKALIAYTQMNKSNDNDWFRISA 60

Query: 61  ANPEGTRWIGKCWYIHNLLKYEFDLQFDIPVTYPSTAPELELPELDGKTQKMYRGGKICL 120
           ANPEGTRWIGKCWYIHNLLKYEFDLQFDIPVTYPSTAPELELPELDGKTQKMYRGGKICL
Sbjct: 61  ANPEGTRWIGKCWYIHNLLKYEFDLQFDIPVTYPSTAPELELPELDGKTQKMYRGGKICL 120

Query: 121 TIHFKPLWAKNCPRFGIAHALCLGLAPWLAAEVPVLVDSGMIKHKDNTTSTSES 175
           TIHFKPLWAKNCPRFGIAHALCLGLAPWLAAEVPVLVDSGMIKHKDN TSTSES
Sbjct: 121 TIHFKPLWAKNCPRFGIAHALCLGLAPWLAAEVPVLVDSGMIKHKDN-TSTSES 173

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BLAST of CmoCh09G005960 vs. NCBI nr
Match: XP_022981060.1 (ubiquitin-fold modifier-conjugating enzyme 1 [Cucurbita maxima] >XP_023524845.1 ubiquitin-fold modifier-conjugating enzyme 1 [Cucurbita pepo subsp. pepo])

HSP 1 Score: 370.5 bits (950), Expect = 7.7e-99
Identity = 169/174 (97.13%), Postives = 172/174 (98.85%), Query Frame = 0


Query: 1   MEGWDPNTKSTLTQIPLLTTKAGPRDGAPWTQRLKEEYKALIAYTQMNKSNDNDWFRISA 60
           MEGWDPNTKSTLTQIPLLTTKAGPRDGA WTQRLKEEYKALIAYTQMNKSNDNDWFRISA
Sbjct: 1   MEGWDPNTKSTLTQIPLLTTKAGPRDGAAWTQRLKEEYKALIAYTQMNKSNDNDWFRISA 60

Query: 61  ANPEGTRWIGKCWYIHNLLKYEFDLQFDIPVTYPSTAPELELPELDGKTQKMYRGGKICL 120
           ANPEGTRWIGKCWY+HNLLKYEFDLQFDIP+TYPSTAPELELPELDGKTQKMYRGGKICL
Sbjct: 61  ANPEGTRWIGKCWYVHNLLKYEFDLQFDIPITYPSTAPELELPELDGKTQKMYRGGKICL 120

Query: 121 TIHFKPLWAKNCPRFGIAHALCLGLAPWLAAEVPVLVDSGMIKHKDNTTSTSES 175
           TIHFKPLWAKN PRFGIAHALCLGLAPWLAAEVP+LVDSGMIKHKDNTTSTSES
Sbjct: 121 TIHFKPLWAKNSPRFGIAHALCLGLAPWLAAEVPILVDSGMIKHKDNTTSTSES 174

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BLAST of CmoCh09G005960 vs. TAIR 10
Match: AT1G27530.1 (CONTAINS InterPro DOMAIN/s: Ubiquitin-conjugating enzyme/RWD-like (InterPro:IPR016135), Ubiquitin-fold modifier-conjugating enzyme 1 (InterPro:IPR014806); Has 269 Blast hits to 269 proteins in 110 species: Archae - 0; Bacteria - 0; Metazoa - 175; Fungi - 0; Plants - 42; Viruses - 0; Other Eukaryotes - 52 (source: NCBI BLink). )

HSP 1 Score: 354.0 bits (907), Expect = 6.9e-98
Identity = 155/174 (89.08%), Postives = 169/174 (97.13%), Query Frame = 0


Query: 1   MEGWDPNTKSTLTQIPLLTTKAGPRDGAPWTQRLKEEYKALIAYTQMNKSNDNDWFRISA 60
           MEGWDPNTKSTLT+IPLLTTKAGPRDGA WTQRLKEEYK+LIAYTQMNKSNDNDWFRISA
Sbjct: 1   MEGWDPNTKSTLTRIPLLTTKAGPRDGAAWTQRLKEEYKSLIAYTQMNKSNDNDWFRISA 60

Query: 61  ANPEGTRWIGKCWYIHNLLKYEFDLQFDIPVTYPSTAPELELPELDGKTQKMYRGGKICL 120
           +NPEGTRW GKCWY+HNLLKYEFDLQFDIP+TYP+TAPELELPE+DGKTQKMYRGGKICL
Sbjct: 61  SNPEGTRWTGKCWYVHNLLKYEFDLQFDIPITYPATAPELELPEIDGKTQKMYRGGKICL 120

Query: 121 TIHFKPLWAKNCPRFGIAHALCLGLAPWLAAEVPVLVDSGMIKHKDNTTSTSES 175
           T+HFKPLWAKNCPRFGIAHALCLGLAPWLAAE+P+LVDSG IKHKD+  +++ES
Sbjct: 121 TVHFKPLWAKNCPRFGIAHALCLGLAPWLAAEIPILVDSGAIKHKDDAATSAES 174

The following BLAST results are available for this feature:

BLAST of CmoCh09G005960 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
Q9SXC8	9.8e-97	89.08	Ubiquitin-fold modifier-conjugating enzyme 1 OS=Arabidopsis thaliana OX=3702 GN=...	[more]
A2Z5S8	1.9e-84	78.16	Ubiquitin-fold modifier-conjugating enzyme 1 OS=Oryza sativa subsp. indica OX=39...	[more]
Q8S625	1.9e-84	78.16	Ubiquitin-fold modifier-conjugating enzyme 1 OS=Oryza sativa subsp. japonica OX=...	[more]
Q1ZXC9	2.4e-71	73.62	Ubiquitin-fold modifier-conjugating enzyme 1 OS=Dictyostelium discoideum OX=4468...	[more]
A7SM54	1.2e-70	70.06	Ubiquitin-fold modifier-conjugating enzyme 1 OS=Nematostella vectensis OX=45351 ...	[more]

BLAST of CmoCh09G005960 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A6J1FGK7	1.4e-101	100.00	Ubiquitin-fold modifier-conjugating enzyme 1 OS=Cucurbita moschata OX=3662 GN=LO...	[more]
A0A5D3E6S1	5.7e-100	98.28	Ubiquitin-fold modifier-conjugating enzyme 1 OS=Cucumis melo var. makuwa OX=1194...	[more]
A0A0A0LHR4	5.7e-100	98.28	Ubiquitin-fold modifier-conjugating enzyme 1 OS=Cucumis sativus OX=3659 GN=Csa_3...	[more]
A0A1S3CRV9	5.7e-100	98.28	Ubiquitin-fold modifier-conjugating enzyme 1 OS=Cucumis melo OX=3656 GN=LOC10350...	[more]
A0A6J1IYE2	3.7e-99	97.13	Ubiquitin-fold modifier-conjugating enzyme 1 OS=Cucurbita maxima OX=3661 GN=LOC1...	[more]

BLAST of CmoCh09G005960 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_022937420.1	2.8e-101	100.00	ubiquitin-fold modifier-conjugating enzyme 1-like [Cucurbita moschata] >XP_02293...	[more]
XP_004136240.1	1.2e-99	98.28	ubiquitin-fold modifier-conjugating enzyme 1 [Cucumis sativus] >XP_008466109.1 P...	[more]
XP_038896748.1	1.2e-99	98.28	ubiquitin-fold modifier-conjugating enzyme 1 [Benincasa hispida]	[more]
XP_023535437.1	2.6e-99	99.43	ubiquitin-fold modifier-conjugating enzyme 1-like [Cucurbita pepo subsp. pepo] >...	[more]
XP_022981060.1	7.7e-99	97.13	ubiquitin-fold modifier-conjugating enzyme 1 [Cucurbita maxima] >XP_023524845.1 ...	[more]

BLAST of CmoCh09G005960 vs. TAIR 10


Match Name	E-value	Identity	Description
AT1G27530.1	6.9e-98	89.08	CONTAINS InterPro DOMAIN/s: Ubiquitin-conjugating enzyme/RWD-like (InterPro:IPR0...	[more]

InterPro

Analysis Name: InterPro Annotations of Cucurbita moschata (Rifu) v1
Date Performed: 2021-10-25

Position :

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IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR016135	Ubiquitin-conjugating enzyme/RWD-like	GENE3D	3.10.110.10	Ubiquitin Conjugating Enzyme	coord: 1..170 e-value: 1.3E-92 score: 309.7
IPR016135	Ubiquitin-conjugating enzyme/RWD-like	SUPERFAMILY	54495	UBC-like	coord: 5..164
IPR014806	Ubiquitin-fold modifier-conjugating enzyme 1	PIRSF	PIRSF008716	Ufc1	coord: 3..168 e-value: 2.2E-92 score: 305.0
IPR014806	Ubiquitin-fold modifier-conjugating enzyme 1	PFAM	PF08694	UFC1	coord: 8..163 e-value: 4.2E-84 score: 279.9
IPR014806	Ubiquitin-fold modifier-conjugating enzyme 1	PANTHER	PTHR12921	UBIQUITIN-FOLD MODIFIER-CONJUGATING ENZYME 1	coord: 5..172
None	No IPR available	PIRSR	PIRSR008716-1	PIRSR008716-1	coord: 4..167 e-value: 1.7E-89 score: 295.5
None	No IPR available	PANTHER	PTHR12921:SF0	UBIQUITIN-FOLD MODIFIER-CONJUGATING ENZYME 1	coord: 5..172

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
CmoCh09G005960.1	CmoCh09G005960.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:1990592	protein K69-linked ufmylation
biological_process	GO:0071569	protein ufmylation
molecular_function	GO:0061657	UFM1 conjugating enzyme activity