CmoCh09G005860 (gene) Cucurbita moschata (Rifu) v1

Overview


Name	CmoCh09G005860
Type	gene
Organism	Cucurbita moschata (Cucurbita moschata (Rifu) v1)
Description	XIAP-associated factor 1-like
Location	Cmo_Chr09: 2881669 .. 2884776 (-)
RNA-Seq Expression	CmoCh09G005860
Synteny	CmoCh09G005860

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonfive_prime_UTRpolypeptideCDSthree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

TCCTTTGGTAAAGGGTGGGTGAGGGTCTTCGTTCTTGAAACTCATTCACTTAATTGAAGTACTTGAATACAAGTCGGTCCTCGAAAAGTTATCGATCCGCGACTACAATTTCTTGTAATTTTCATTCAATCTAAGAGTCTTTCCATTTTATCCTCTTTTTGATCTCCTCAAATTTCTCTGCAGGGCTTCAATTCTCATTCCCCTAATTTTGACATAATCGGACCTTGAACGACGATCGTCTACCTTCCGTCACGATGGCAGTTGCATCTGAAGAGACCACAAGCATATGCAATCACTGGTATTGTAATTCTGGACGGATGTGTATATATATATTTTTTTTTCGGCAAGAGATCTCTTGATTAGAAATTTTATTTCAATTTATTTTATTTCTGGCGTTGATTTTTGTTGATGTCTCTGTCAATCGCGATTATCGTTTGTGATTGTTTCGGAATTTCGATTTATTCCTTTCAATTGTGTTTGAGATTAGATTGTTTTGGGGGATAGAACTCTCATACAATTTAGGCACAAATCTGCCAAGGCAGGATCGTTATTTTGTTTTTTTGATTTGGAAAAAGAACTGTTTGGTAAGAATTTGAATCGCCTGATTATCTTTTCTTCTTCGTGATGAATTTGTTATCTGATCCCTTTCCTAGCAGTTGTTCTTCTATTGTGATGATCTGGATGGTAAATGCTTTTATTTCTCCATTTACAGCGGCAGAGACATTCCGTCGGCAAATATCGATCTGCATTCTGTTCATTGCGCGCGGAATCTAGAAAAATGTAAAATATGTGGCGATATGGTTCCTAAAAGACATGCGGAGGAACATTATCTGAACACTCATGCTCCCGTACGATGATTTTTCTTTCAAACTTAGTAAATACCATGGCATTCATATTCTATAGTGCATAAATGAAAGCATAACATTAAGCTTGAGGGTTATTATATTTTCTTTAGATTGCCTTGAGAAGATTCTGCAGCATACAAATTCTCTCTTAAGACTGTTTTGATAAGAATTAGTGGTACTACTCTTACTTTTTGGAATTTCAAGTGCTTATGACCTTATGTTTGGACAGGTTTCCTGTTCGCTGTGTAGCGAGACCATGGAACGGGACATTTTAGCCATTCATAAAGGCGAAAACTGCCCTCAAAGGATTGTTACTTGCGAGTTCTGCGAGTTCCCATTGCCAGCAGTAGATTTGGCTGAGCATCAGGTATGACAAATATTGAATTTGTAGTCAAATGAGAATTTCAAAAGCGATCTCCCTGTTATACCTTTGTTGGTGGTTCAAATGTACAGGAAGTATGTGGTAACCGGACCGAACTTTGTCATCTGTGTCGTCGATATATCAGACTACGAGAACGATATAGCCATGAAAATAATTGCAAGGGTGTCACAGCTGCAGATACCGTTGCTGAATCTTCCAGGTATTTCAATTTGCAATTCTTGAAAGTATTCAACTTATTCTATACTGATGACTGCCATCTCTCATTGAGCCCCATAGAATGTCGATTTTTGATGCTATATGCAGTTGGTAGTGCTTAGTTTAAGGTTCTGTATAGTTATCCTATGGCTATGGCTTTCTTCTTGTGGATATCGAAAACCATGGAAATTTTAGATACCCTCTTCCATGGATTTCTCTGCCCTCTCTTTTCATTATCATATATTAATTAATGTTGATCAATTGGTTATTTAATCTGTCTTAGTATTCATTTGTTACTTCTATAAATACATTTTGAAATTAAATATCTGAACTTTTCAGTCTCAATCTTCACTCATCAAGGAAAAACCAAACCTTTTCACAACTATAGATGTAACCTCCCTTTTCCTTCTAGGCTTCCCTCCAAGGTTTTAAAACGCGTCTATTAGAGGGAGGTTTCCATACCCTTATAAGTAATGTTTCGTTCCCCTCTCCAACCGATGTGGGTTCTTACAATCCACCCCCTTTGGGGACCAGCGTCCTCGCTGAGACACCTCCTGATGTCTGGCTTTGATATCATTTGTAACAGTCTAAGCCTACTGTTCGCAGATGTTGTCCTCTTTGTACTTTCTCTTTTGGGCTTCCCCTCGAGGTTTTAAAATGCATCTACTAGGTAAAGGTTTCCACACTCTTATAAGAAATGTTTCGTTTCCCTCTCCAAACGATGTGGGATCTCACACAAGATGAGTTCCATGGATTCAAGTGCTAAATCTGAAACTTGCACTTTATTTGAAAACATCTCCCTGGTCTTTTGTAAACTTAAACTTCGGCAATAAATGAGTCTTGATGGTATTGTACACGAGTGCCCTGTAATTTGTGTGTTCTTTGTTCTTCCTTCTTCTCAACGGAATGACGAAGGTTAGCATCGTTACATGGCGCACCGATGTGCCTATGCTGCCACTAGGGTTAGCTTCCAATTTATACTGGGTCGGTTAGGAATATACCAGATCGAATGAACTTATAGTATGTGGGTATGATTCGTGGTACAACTTTGAACTCAACCCTCAGTTTTTTACTCACGTTCATAACTTTTCTTATTCTATATGTTCAGTTTGTTATCTTCTAATAACGTGCTTAATCATTCTAAACTGTATCTGAAGGGATGTGGGGGCAGCTCCAGAAAGAGATCAAGTTAGAGATCGAGGCGCTCGACGAAGACAGCCACAGGAGTTTTCTACCCGACGTCTTATATTCACTATTGCGATAACGGGCATTGCCGTTCTACTAGGATCGCTATTTTTCCAGAGAAAGGCCGAGAGCAACATCGTGCACTGATCGATGGTAAGCTTACCATAGATCCTACGACTTCCATTTTTCTGCAGCAAGAATATCAGAACACTGCTGTAAACTTATGAAACACATGGGCGGATAATTTGATTATGGCCTGATGCTCTGCCTCCTCTGCTCTTTGGGGGATTTTATTTATGTTCGTTGGAATTACGTGGGAAGAAAAAGTAAATTTAATTTACAAATTTAATTCCTAGCGATTTTTTTTTTACTTTTCACTTTGTTATTAGCGTACTGAATGAGTTCCCATTTTGTGAATATTTGGTTTTTTAAGAGATAAATATAATTGTTCCTAAAATTGCTACTTTTTAAATGTCAAGAATTTAGAATCTGCCATTGTCA

mRNA sequence

TCCTTTGGTAAAGGGTGGGTGAGGGTCTTCGTTCTTGAAACTCATTCACTTAATTGAAGTACTTGAATACAAGTCGGTCCTCGAAAAGTTATCGATCCGCGACTACAATTTCTTGGCTTCAATTCTCATTCCCCTAATTTTGACATAATCGGACCTTGAACGACGATCGTCTACCTTCCGTCACGATGGCAGTTGCATCTGAAGAGACCACAAGCATATGCAATCACTGTTGTTCTTCTATTGTGATGATCTGGATGGTAAATGCTTTTATTTCTCCATTTACAGCGGCAGAGACATTCCGTCGGCAAATATCGATCTGCATTCTGTTCATTGCGCGCGGAATCTAGAAAAATGTAAAATATGTGGCGATATGGTTCCTAAAAGACATGCGGAGGAACATTATCTGAACACTCATGCTCCCGTTTCCTGTTCGCTGTGTAGCGAGACCATGGAACGGGACATTTTAGCCATTCATAAAGGCGAAAACTGCCCTCAAAGGATTGTTACTTGCGAGTTCTGCGAGTTCCCATTGCCAGCAGTAGATTTGGCTGAGCATCAGGAAGTATGTGGTAACCGGACCGAACTTTGTCATCTGTGTCGTCGATATATCAGACTACGAGAACGATATAGCCATGAAAATAATTGCAAGGGTGTCACAGCTGCAGATACCGTTGCTGAATCTTCCAGGGATGTGGGGGCAGCTCCAGAAAGAGATCAAGTTAGAGATCGAGGCGCTCGACGAAGACAGCCACAGGAGTTTTCTACCCGACGTCTTATATTCACTATTGCGATAACGGGCATTGCCGTTCTACTAGGATCGCTATTTTTCCAGAGAAAGGCCGAGAGCAACATCGTGCACTGATCGATGGTAAGCTTACCATAGATCCTACGACTTCCATTTTTCTGCAGCAAGAATATCAGAACACTGCTGTAAACTTATGAAACACATGGGCGGATAATTTGATTATGGCCTGATGCTCTGCCTCCTCTGCTCTTTGGGGGATTTTATTTATGTTCGTTGGAATTACGTGGGAAGAAAAAGTAAATTTAATTTACAAATTTAATTCCTAGCGATTTTTTTTTTACTTTTCACTTTGTTATTAGCGTACTGAATGAGTTCCCATTTTGTGAATATTTGGTTTTTTAAGAGATAAATATAATTGTTCCTAAAATTGCTACTTTTTAAATGTCAAGAATTTAGAATCTGCCATTGTCA

Coding sequence (CDS)

ATGCAATCACTGTTGTTCTTCTATTGTGATGATCTGGATGGTAAATGCTTTTATTTCTCCATTTACAGCGGCAGAGACATTCCGTCGGCAAATATCGATCTGCATTCTGTTCATTGCGCGCGGAATCTAGAAAAATGTAAAATATGTGGCGATATGGTTCCTAAAAGACATGCGGAGGAACATTATCTGAACACTCATGCTCCCGTTTCCTGTTCGCTGTGTAGCGAGACCATGGAACGGGACATTTTAGCCATTCATAAAGGCGAAAACTGCCCTCAAAGGATTGTTACTTGCGAGTTCTGCGAGTTCCCATTGCCAGCAGTAGATTTGGCTGAGCATCAGGAAGTATGTGGTAACCGGACCGAACTTTGTCATCTGTGTCGTCGATATATCAGACTACGAGAACGATATAGCCATGAAAATAATTGCAAGGGTGTCACAGCTGCAGATACCGTTGCTGAATCTTCCAGGGATGTGGGGGCAGCTCCAGAAAGAGATCAAGTTAGAGATCGAGGCGCTCGACGAAGACAGCCACAGGAGTTTTCTACCCGACGTCTTATATTCACTATTGCGATAACGGGCATTGCCGTTCTACTAGGATCGCTATTTTTCCAGAGAAAGGCCGAGAGCAACATCGTGCACTGA

Protein sequence

MQSLLFFYCDDLDGKCFYFSIYSGRDIPSANIDLHSVHCARNLEKCKICGDMVPKRHAEEHYLNTHAPVSCSLCSETMERDILAIHKGENCPQRIVTCEFCEFPLPAVDLAEHQEVCGNRTELCHLCRRYIRLRERYSHENNCKGVTAADTVAESSRDVGAAPERDQVRDRGARRRQPQEFSTRRLIFTIAITGIAVLLGSLFFQRKAESNIVH

Homology

[Close]

BLAST of CmoCh09G005860 vs. ExPASy Swiss-Prot
Match: Q4R970 (TRAF-type zinc finger domain-containing protein 1 OS=Macaca fascicularis OX=9541 GN=TRAFD1 PE=2 SV=1)

HSP 1 Score: 102.8 bits (255), Expect = 4.8e-21
Identity = 42/119 (35.29%), Postives = 66/119 (55.46%), Query Frame = 0


Query: 25  RDIPSANIDLHSVHCARNLEKCKICGDMVPKRHAEEHYLNTHAPVSCSLCSETMERDILA 84
           ++IP  N  +H +HC RN+  C IC +  PK   E H    H  V+C  C++ +E+ +L 
Sbjct: 18  KEIPVFNFTIHEIHCQRNIGMCPICKEPFPKSDMETHMAAEHCQVTCK-CNKKLEKRLLK 77

Query: 85  IHKGENCPQRIVTCEFCEFPLPAVDLAEHQEVCGNRTELCHLCRRYIRLRERYSHENNC 144
            H+   CP R+  C+ C+  L  + L EH++ CG RTELC  C R + +++  +H   C
Sbjct: 78  KHEETECPLRLAVCQHCDLELSILKLKEHEDYCGARTELCGNCGRNVLVKDLKTHPEVC 135

[Close]

BLAST of CmoCh09G005860 vs. ExPASy Swiss-Prot
Match: Q6GPH4 (XIAP-associated factor 1 OS=Homo sapiens OX=9606 GN=XAF1 PE=1 SV=1)

HSP 1 Score: 102.8 bits (255), Expect = 4.8e-21
Identity = 51/142 (35.92%), Postives = 72/142 (50.70%), Query Frame = 0


Query: 25  RDIPSANIDLHSVHCARNLEKCKICGDMVPKRHAEEHYLNTHAPVSCSLCSETMERDILA 84
           R + SAN  LH  +C R L  C  C + VPK   EEH    H  V C++C ++M++  L 
Sbjct: 13  RHVVSANFTLHEAYCLRFLVLCPECEEPVPKETMEEHCKLEHQQVGCTMCQQSMQKSSLE 72

Query: 85  IHKGENCPQRIVTCEFCEFPLPAVDLAEHQEVCGNRTELCHLCRRYIRLRERYSHENNCK 144
            HK   C +R V C+FC+  +    L  H+  CG+RTELC  C ++I  R    H + C+
Sbjct: 73  FHKANECQERPVECKFCKLDMQLSKLELHESYCGSRTELCQGCGQFIMHRMLAQHRDVCR 132

Query: 145 GVTAADTVAESSRDVGAAPERD 167
              A     E      +APER+
Sbjct: 133 SEQAQLGKGERI----SAPERE 150

[Close]

BLAST of CmoCh09G005860 vs. ExPASy Swiss-Prot
Match: O14545 (TRAF-type zinc finger domain-containing protein 1 OS=Homo sapiens OX=9606 GN=TRAFD1 PE=1 SV=1)

HSP 1 Score: 100.9 bits (250), Expect = 1.8e-20
Identity = 41/119 (34.45%), Postives = 65/119 (54.62%), Query Frame = 0


Query: 25  RDIPSANIDLHSVHCARNLEKCKICGDMVPKRHAEEHYLNTHAPVSCSLCSETMERDILA 84
           ++IP  N  +H +HC RN+  C  C +  PK   E H    H  V+C  C++ +E+ +L 
Sbjct: 18  KEIPVFNFTIHEIHCQRNIGMCPTCKEPFPKSDMETHMAAEHCQVTCK-CNKKLEKRLLK 77

Query: 85  IHKGENCPQRIVTCEFCEFPLPAVDLAEHQEVCGNRTELCHLCRRYIRLRERYSHENNC 144
            H+   CP R+  C+ C+  L  + L EH++ CG RTELC  C R + +++  +H   C
Sbjct: 78  KHEETECPLRLAVCQHCDLELSILKLKEHEDYCGARTELCGNCGRNVLVKDLKTHPEVC 135

[Close]

BLAST of CmoCh09G005860 vs. ExPASy Swiss-Prot
Match: Q99MM4 (TRAF-type zinc finger domain-containing protein 1 OS=Rattus norvegicus OX=10116 GN=Trafd1 PE=1 SV=2)

HSP 1 Score: 100.9 bits (250), Expect = 1.8e-20
Identity = 47/139 (33.81%), Postives = 69/139 (49.64%), Query Frame = 0


Query: 25  RDIPSANIDLHSVHCARNLEKCKICGDMVPKRHAEEHYLNTHAPVSCSLCSETMERDILA 84
           ++IP  N  +H +HC RN+  C +C +  PK   + H    H  V+C  C++ +E+  L 
Sbjct: 18  KEIPVFNFTIHEIHCQRNIGVCPVCKEPFPKSDMDIHVATEHCQVTCK-CNKKLEKRQLK 77

Query: 85  IHKGENCPQRIVTCEFCEFPLPAVDLAEHQEVCGNRTELCHLCRRYIRLRERYSHENNCK 144
            H    CP R+  C+ C+  L  V L EH++ CG RTELC  C R + ++E  +H   C 
Sbjct: 78  QHVETECPLRLAVCQHCDLELSVVKLKEHEDYCGARTELCGSCGRNVLVKELQTHPAVC- 137

Query: 145 GVTAADTVAESSRDVGAAP 164
                  V E  R   A P
Sbjct: 138 -----GRVEEEKRSEAAVP 149

[Close]

BLAST of CmoCh09G005860 vs. ExPASy Swiss-Prot
Match: Q3UDK1 (TRAF-type zinc finger domain-containing protein 1 OS=Mus musculus OX=10090 GN=Trafd1 PE=1 SV=1)

HSP 1 Score: 100.1 bits (248), Expect = 3.1e-20
Identity = 47/139 (33.81%), Postives = 69/139 (49.64%), Query Frame = 0


Query: 25  RDIPSANIDLHSVHCARNLEKCKICGDMVPKRHAEEHYLNTHAPVSCSLCSETMERDILA 84
           ++IP  N  +H +HC RN+  C +C +  PK   + H    H  V+C  C++ +E+  L 
Sbjct: 18  KEIPVFNFTIHEIHCQRNIGVCPVCKEPFPKSDMDIHMAAEHCQVTCK-CNKKLEKRQLK 77

Query: 85  IHKGENCPQRIVTCEFCEFPLPAVDLAEHQEVCGNRTELCHLCRRYIRLRERYSHENNCK 144
            H    CP R+  C+ C+  L  V L EH++ CG RTELC  C R + ++E  +H   C 
Sbjct: 78  QHAETECPLRLAVCQHCDLELSVVKLKEHEDYCGARTELCGSCGRNVLVKELKTHPEVC- 137

Query: 145 GVTAADTVAESSRDVGAAP 164
                  V E  R   A P
Sbjct: 138 -----GRVEEEKRTEAAIP 149

[Close]

BLAST of CmoCh09G005860 vs. ExPASy TrEMBL
Match: A0A6J1F858 (XIAP-associated factor 1-like OS=Cucurbita moschata OX=3662 GN=LOC111443198 PE=4 SV=1)

HSP 1 Score: 399.8 bits (1026), Expect = 7.1e-108
Identity = 191/193 (98.96%), Postives = 192/193 (99.48%), Query Frame = 0


Query: 22  YSGRDIPSANIDLHSVHCARNLEKCKICGDMVPKRHAEEHYLNTHAPVSCSLCSETMERD 81
           + GRDIPSANIDLHSVHCARNLEKCKICGDMVPKRHAEEHYLNTHAPVSCSLCSETMERD
Sbjct: 14  HCGRDIPSANIDLHSVHCARNLEKCKICGDMVPKRHAEEHYLNTHAPVSCSLCSETMERD 73

Query: 82  ILAIHKGENCPQRIVTCEFCEFPLPAVDLAEHQEVCGNRTELCHLCRRYIRLRERYSHEN 141
           ILAIHKGENCPQRIVTCEFCEFPLPAVDLAEHQEVCGNRTELCHLCRRYIRLRERYSHEN
Sbjct: 74  ILAIHKGENCPQRIVTCEFCEFPLPAVDLAEHQEVCGNRTELCHLCRRYIRLRERYSHEN 133

Query: 142 NCKGVTAADTVAESSRDVGAAPERDQVRDRGARRRQPQEFSTRRLIFTIAITGIAVLLGS 201
           NCKGVTAADTVAESSRDVGAAPERDQVRDRGARRRQPQEFSTRRLIFTIAITGIAVLLGS
Sbjct: 134 NCKGVTAADTVAESSRDVGAAPERDQVRDRGARRRQPQEFSTRRLIFTIAITGIAVLLGS 193

Query: 202 LFFQRKAESNIVH 215
           LFFQRKAESNIVH
Sbjct: 194 LFFQRKAESNIVH 206

[Close]

BLAST of CmoCh09G005860 vs. ExPASy TrEMBL
Match: A0A6J1IKG6 (XIAP-associated factor 1-like OS=Cucurbita maxima OX=3661 GN=LOC111476436 PE=4 SV=1)

HSP 1 Score: 396.7 bits (1018), Expect = 6.0e-107
Identity = 189/193 (97.93%), Postives = 191/193 (98.96%), Query Frame = 0


Query: 22  YSGRDIPSANIDLHSVHCARNLEKCKICGDMVPKRHAEEHYLNTHAPVSCSLCSETMERD 81
           + GRDIPSANIDLHSVHCARNLEKCKICGDMVPKRHAEEHYLNTHAPVSCSLCSETMERD
Sbjct: 14  HCGRDIPSANIDLHSVHCARNLEKCKICGDMVPKRHAEEHYLNTHAPVSCSLCSETMERD 73

Query: 82  ILAIHKGENCPQRIVTCEFCEFPLPAVDLAEHQEVCGNRTELCHLCRRYIRLRERYSHEN 141
           ILAIHKGENCPQRIVTCEFCEFPLPAVDLAEHQEVCGNRTELCHLCRRYIRLRERYSHEN
Sbjct: 74  ILAIHKGENCPQRIVTCEFCEFPLPAVDLAEHQEVCGNRTELCHLCRRYIRLRERYSHEN 133

Query: 142 NCKGVTAADTVAESSRDVGAAPERDQVRDRGARRRQPQEFSTRRLIFTIAITGIAVLLGS 201
           NCKGV AADTVAESSRDVGAAPERDQVRDRGARRRQPQEFSTRRLIFTIAITGIAVLLGS
Sbjct: 134 NCKGVAAADTVAESSRDVGAAPERDQVRDRGARRRQPQEFSTRRLIFTIAITGIAVLLGS 193

Query: 202 LFFQRKAESNIVH 215
           LFFQRKAESNI+H
Sbjct: 194 LFFQRKAESNIMH 206

[Close]

BLAST of CmoCh09G005860 vs. ExPASy TrEMBL
Match: A0A1S3CRX9 (XIAP-associated factor 1 OS=Cucumis melo OX=3656 GN=LOC103503642 PE=4 SV=1)

HSP 1 Score: 371.7 bits (953), Expect = 2.1e-99
Identity = 176/194 (90.72%), Postives = 185/194 (95.36%), Query Frame = 0


Query: 22  YSGRDIPSANIDLHSVHCARNLEKCKICGDMVPKRHAEEHYLNTHAPVSCSLCSETMERD 81
           + GRDIPS+NIDLHSVHC RNLEKCKICGDMVPKRHAEEH+LNTHAPVSCSLCSETMERD
Sbjct: 14  HCGRDIPSSNIDLHSVHCVRNLEKCKICGDMVPKRHAEEHFLNTHAPVSCSLCSETMERD 73

Query: 82  ILAIHKGENCPQRIVTCEFCEFPLPAVDLAEHQEVCGNRTELCHLCRRYIRLRERYSHEN 141
           ILAIHKGENCPQRIVTCEFCEFPLPA+DLAEHQEVCGNRTELC LCR YIRLRERY+HEN
Sbjct: 74  ILAIHKGENCPQRIVTCEFCEFPLPAIDLAEHQEVCGNRTELCPLCRCYIRLRERYNHEN 133

Query: 142 NCKGVTAADTVAESSRDVGAAPERD-QVRDRGARRRQPQEFSTRRLIFTIAITGIAVLLG 201
           NCKG+  AD +AESSRDVGAAPERD Q RDRGA+RRQPQEFSTRRLIFTIAITGIAVLLG
Sbjct: 134 NCKGIVPADNIAESSRDVGAAPERDHQARDRGAQRRQPQEFSTRRLIFTIAITGIAVLLG 193

Query: 202 SLFFQRKAESNIVH 215
           SLFFQRK+ESNIVH
Sbjct: 194 SLFFQRKSESNIVH 207

[Close]

BLAST of CmoCh09G005860 vs. ExPASy TrEMBL
Match: A0A5D3E5M7 (XIAP-associated factor 1 OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold455G005430 PE=4 SV=1)

HSP 1 Score: 371.7 bits (953), Expect = 2.1e-99
Identity = 176/194 (90.72%), Postives = 185/194 (95.36%), Query Frame = 0


Query: 22  YSGRDIPSANIDLHSVHCARNLEKCKICGDMVPKRHAEEHYLNTHAPVSCSLCSETMERD 81
           + GRDIPS+NIDLHSVHC RNLEKCKICGDMVPKRHAEEH+LNTHAPVSCSLCSETMERD
Sbjct: 14  HCGRDIPSSNIDLHSVHCVRNLEKCKICGDMVPKRHAEEHFLNTHAPVSCSLCSETMERD 73

Query: 82  ILAIHKGENCPQRIVTCEFCEFPLPAVDLAEHQEVCGNRTELCHLCRRYIRLRERYSHEN 141
           ILAIHKGENCPQRIVTCEFCEFPLPA+DLAEHQEVCGNRTELC LCR YIRLRERY+HEN
Sbjct: 74  ILAIHKGENCPQRIVTCEFCEFPLPAIDLAEHQEVCGNRTELCPLCRCYIRLRERYNHEN 133

Query: 142 NCKGVTAADTVAESSRDVGAAPERD-QVRDRGARRRQPQEFSTRRLIFTIAITGIAVLLG 201
           NCKG+  AD +AESSRDVGAAPERD Q RDRGA+RRQPQEFSTRRLIFTIAITGIAVLLG
Sbjct: 134 NCKGIVPADNIAESSRDVGAAPERDHQARDRGAQRRQPQEFSTRRLIFTIAITGIAVLLG 193

Query: 202 SLFFQRKAESNIVH 215
           SLFFQRK+ESNIVH
Sbjct: 194 SLFFQRKSESNIVH 207

[Close]

BLAST of CmoCh09G005860 vs. ExPASy TrEMBL
Match: A0A0A0LHP4 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_3G892780 PE=4 SV=1)

HSP 1 Score: 368.6 bits (945), Expect = 1.7e-98
Identity = 176/194 (90.72%), Postives = 183/194 (94.33%), Query Frame = 0


Query: 22  YSGRDIPSANIDLHSVHCARNLEKCKICGDMVPKRHAEEHYLNTHAPVSCSLCSETMERD 81
           + GRDIPS+NIDLHSVHCARNLEKCKICGDMVPKRHAEEH+LNTHAPVSCSLCSETMERD
Sbjct: 14  HCGRDIPSSNIDLHSVHCARNLEKCKICGDMVPKRHAEEHFLNTHAPVSCSLCSETMERD 73

Query: 82  ILAIHKGENCPQRIVTCEFCEFPLPAVDLAEHQEVCGNRTELCHLCRRYIRLRERYSHEN 141
           ILAIHKGENCPQRIVTCEFCEFPLPA+DLAEHQEVCGNRTELC LCR YIRLRERY+HEN
Sbjct: 74  ILAIHKGENCPQRIVTCEFCEFPLPAIDLAEHQEVCGNRTELCPLCRCYIRLRERYNHEN 133

Query: 142 NCKGVTAADTVAESSRDVGAAPERD-QVRDRGARRRQPQEFSTRRLIFTIAITGIAVLLG 201
           NCKG+  AD +AESSRDVGAAPERD Q RDRGARRRQPQEFSTRRLIFTIAITGIAVLLG
Sbjct: 134 NCKGIIPADNIAESSRDVGAAPERDHQARDRGARRRQPQEFSTRRLIFTIAITGIAVLLG 193

Query: 202 SLFFQRKAESNIVH 215
           SLFF RK ESN VH
Sbjct: 194 SLFFPRKTESNGVH 207

[Close]

BLAST of CmoCh09G005860 vs. NCBI nr
Match: XP_022936676.1 (XIAP-associated factor 1-like [Cucurbita moschata])

HSP 1 Score: 399.8 bits (1026), Expect = 1.5e-107
Identity = 191/193 (98.96%), Postives = 192/193 (99.48%), Query Frame = 0


Query: 22  YSGRDIPSANIDLHSVHCARNLEKCKICGDMVPKRHAEEHYLNTHAPVSCSLCSETMERD 81
           + GRDIPSANIDLHSVHCARNLEKCKICGDMVPKRHAEEHYLNTHAPVSCSLCSETMERD
Sbjct: 14  HCGRDIPSANIDLHSVHCARNLEKCKICGDMVPKRHAEEHYLNTHAPVSCSLCSETMERD 73

Query: 82  ILAIHKGENCPQRIVTCEFCEFPLPAVDLAEHQEVCGNRTELCHLCRRYIRLRERYSHEN 141
           ILAIHKGENCPQRIVTCEFCEFPLPAVDLAEHQEVCGNRTELCHLCRRYIRLRERYSHEN
Sbjct: 74  ILAIHKGENCPQRIVTCEFCEFPLPAVDLAEHQEVCGNRTELCHLCRRYIRLRERYSHEN 133

Query: 142 NCKGVTAADTVAESSRDVGAAPERDQVRDRGARRRQPQEFSTRRLIFTIAITGIAVLLGS 201
           NCKGVTAADTVAESSRDVGAAPERDQVRDRGARRRQPQEFSTRRLIFTIAITGIAVLLGS
Sbjct: 134 NCKGVTAADTVAESSRDVGAAPERDQVRDRGARRRQPQEFSTRRLIFTIAITGIAVLLGS 193

Query: 202 LFFQRKAESNIVH 215
           LFFQRKAESNIVH
Sbjct: 194 LFFQRKAESNIVH 206

[Close]

BLAST of CmoCh09G005860 vs. NCBI nr
Match: XP_023534901.1 (XIAP-associated factor 1-like [Cucurbita pepo subsp. pepo] >KAG6591703.1 XIAP-associated factor 1, partial [Cucurbita argyrosperma subsp. sororia] >KAG7024586.1 XIAP-associated factor 1 [Cucurbita argyrosperma subsp. argyrosperma])

HSP 1 Score: 397.1 bits (1019), Expect = 9.4e-107
Identity = 189/193 (97.93%), Postives = 191/193 (98.96%), Query Frame = 0


Query: 22  YSGRDIPSANIDLHSVHCARNLEKCKICGDMVPKRHAEEHYLNTHAPVSCSLCSETMERD 81
           + GRDIPS NIDLHSVHCARNLEKCKICGDMVPKRHAEEHYLNTHAPVSCSLCSETMERD
Sbjct: 14  HCGRDIPSTNIDLHSVHCARNLEKCKICGDMVPKRHAEEHYLNTHAPVSCSLCSETMERD 73

Query: 82  ILAIHKGENCPQRIVTCEFCEFPLPAVDLAEHQEVCGNRTELCHLCRRYIRLRERYSHEN 141
           ILAIHKGENCPQRIVTCEFCEFPLPAVDLAEHQEVCGNRTELCHLCRRYIRLRERYSHEN
Sbjct: 74  ILAIHKGENCPQRIVTCEFCEFPLPAVDLAEHQEVCGNRTELCHLCRRYIRLRERYSHEN 133

Query: 142 NCKGVTAADTVAESSRDVGAAPERDQVRDRGARRRQPQEFSTRRLIFTIAITGIAVLLGS 201
           NCKGVTAADTVAESSRDVGAAPERDQVRDRGARRRQPQEFSTRRLIFTIAITGIAVLLGS
Sbjct: 134 NCKGVTAADTVAESSRDVGAAPERDQVRDRGARRRQPQEFSTRRLIFTIAITGIAVLLGS 193

Query: 202 LFFQRKAESNIVH 215
           LFFQRKAESNI+H
Sbjct: 194 LFFQRKAESNIMH 206

[Close]

BLAST of CmoCh09G005860 vs. NCBI nr
Match: XP_022975863.1 (XIAP-associated factor 1-like [Cucurbita maxima])

HSP 1 Score: 396.7 bits (1018), Expect = 1.2e-106
Identity = 189/193 (97.93%), Postives = 191/193 (98.96%), Query Frame = 0


Query: 22  YSGRDIPSANIDLHSVHCARNLEKCKICGDMVPKRHAEEHYLNTHAPVSCSLCSETMERD 81
           + GRDIPSANIDLHSVHCARNLEKCKICGDMVPKRHAEEHYLNTHAPVSCSLCSETMERD
Sbjct: 14  HCGRDIPSANIDLHSVHCARNLEKCKICGDMVPKRHAEEHYLNTHAPVSCSLCSETMERD 73

Query: 82  ILAIHKGENCPQRIVTCEFCEFPLPAVDLAEHQEVCGNRTELCHLCRRYIRLRERYSHEN 141
           ILAIHKGENCPQRIVTCEFCEFPLPAVDLAEHQEVCGNRTELCHLCRRYIRLRERYSHEN
Sbjct: 74  ILAIHKGENCPQRIVTCEFCEFPLPAVDLAEHQEVCGNRTELCHLCRRYIRLRERYSHEN 133

Query: 142 NCKGVTAADTVAESSRDVGAAPERDQVRDRGARRRQPQEFSTRRLIFTIAITGIAVLLGS 201
           NCKGV AADTVAESSRDVGAAPERDQVRDRGARRRQPQEFSTRRLIFTIAITGIAVLLGS
Sbjct: 134 NCKGVAAADTVAESSRDVGAAPERDQVRDRGARRRQPQEFSTRRLIFTIAITGIAVLLGS 193

Query: 202 LFFQRKAESNIVH 215
           LFFQRKAESNI+H
Sbjct: 194 LFFQRKAESNIMH 206

[Close]

BLAST of CmoCh09G005860 vs. NCBI nr
Match: XP_038897923.1 (XIAP-associated factor 1 [Benincasa hispida] >XP_038897924.1 XIAP-associated factor 1 [Benincasa hispida])

HSP 1 Score: 374.4 bits (960), Expect = 6.6e-100
Identity = 178/194 (91.75%), Postives = 184/194 (94.85%), Query Frame = 0


Query: 22  YSGRDIPSANIDLHSVHCARNLEKCKICGDMVPKRHAEEHYLNTHAPVSCSLCSETMERD 81
           + GR IPS+NIDLHSVHC RNLEKCKICGDMVPKRHAEEH+LNTHAPVSCSLCSETMERD
Sbjct: 14  HCGRHIPSSNIDLHSVHCVRNLEKCKICGDMVPKRHAEEHFLNTHAPVSCSLCSETMERD 73

Query: 82  ILAIHKGENCPQRIVTCEFCEFPLPAVDLAEHQEVCGNRTELCHLCRRYIRLRERYSHEN 141
           ILAIHKGENCPQRIVTCEFCEFPLPA+DLAEHQEVCGNRTELCHLCRRYIRLRERYSHEN
Sbjct: 74  ILAIHKGENCPQRIVTCEFCEFPLPAIDLAEHQEVCGNRTELCHLCRRYIRLRERYSHEN 133

Query: 142 NCKGVTAADTVAESSRDVGAAPERD-QVRDRGARRRQPQEFSTRRLIFTIAITGIAVLLG 201
           NCKGV AAD +AESSRDVGAAPERD Q RDR ARRRQP EFSTRRLIFTIAITGIAVLLG
Sbjct: 134 NCKGVVAADNIAESSRDVGAAPERDHQARDRDARRRQPPEFSTRRLIFTIAITGIAVLLG 193

Query: 202 SLFFQRKAESNIVH 215
           SLF QRKAESN+VH
Sbjct: 194 SLFLQRKAESNVVH 207

[Close]

BLAST of CmoCh09G005860 vs. NCBI nr
Match: XP_008466135.1 (PREDICTED: XIAP-associated factor 1 [Cucumis melo] >XP_008466136.1 PREDICTED: XIAP-associated factor 1 [Cucumis melo] >KAA0038651.1 XIAP-associated factor 1 [Cucumis melo var. makuwa] >TYK31254.1 XIAP-associated factor 1 [Cucumis melo var. makuwa])

HSP 1 Score: 371.7 bits (953), Expect = 4.2e-99
Identity = 176/194 (90.72%), Postives = 185/194 (95.36%), Query Frame = 0


Query: 22  YSGRDIPSANIDLHSVHCARNLEKCKICGDMVPKRHAEEHYLNTHAPVSCSLCSETMERD 81
           + GRDIPS+NIDLHSVHC RNLEKCKICGDMVPKRHAEEH+LNTHAPVSCSLCSETMERD
Sbjct: 14  HCGRDIPSSNIDLHSVHCVRNLEKCKICGDMVPKRHAEEHFLNTHAPVSCSLCSETMERD 73

Query: 82  ILAIHKGENCPQRIVTCEFCEFPLPAVDLAEHQEVCGNRTELCHLCRRYIRLRERYSHEN 141
           ILAIHKGENCPQRIVTCEFCEFPLPA+DLAEHQEVCGNRTELC LCR YIRLRERY+HEN
Sbjct: 74  ILAIHKGENCPQRIVTCEFCEFPLPAIDLAEHQEVCGNRTELCPLCRCYIRLRERYNHEN 133

Query: 142 NCKGVTAADTVAESSRDVGAAPERD-QVRDRGARRRQPQEFSTRRLIFTIAITGIAVLLG 201
           NCKG+  AD +AESSRDVGAAPERD Q RDRGA+RRQPQEFSTRRLIFTIAITGIAVLLG
Sbjct: 134 NCKGIVPADNIAESSRDVGAAPERDHQARDRGAQRRQPQEFSTRRLIFTIAITGIAVLLG 193

Query: 202 SLFFQRKAESNIVH 215
           SLFFQRK+ESNIVH
Sbjct: 194 SLFFQRKSESNIVH 207

[Close]

BLAST of CmoCh09G005860 vs. TAIR 10
Match: AT1G09920.1 (TRAF-type zinc finger-related )

HSP 1 Score: 273.9 bits (699), Expect = 1.1e-73
Identity = 131/185 (70.81%), Postives = 145/185 (78.38%), Query Frame = 0


Query: 25  RDIPSANIDLHSVHCARNLEKCKICGDMVPKRHAEEHYLNTHAPVSCSLCSETMERDILA 84
           RDIPS NIDLH VHCARNLEKCKICGDMVPK+HAEEHYLNTHAP++CS+C ET+ER+I  
Sbjct: 17  RDIPSLNIDLHRVHCARNLEKCKICGDMVPKKHAEEHYLNTHAPIACSMCKETIEREIFD 76

Query: 85  IHKGENCPQRIVTCEFCEFPLPAVDLAEHQEVCGNRTELCHLCRRYIRLRERYSHENNCK 144
            HKGE CP+RIVTCEFCEFPLPAVDLAEHQEVCGNRTELC+ C  Y+RLRERY+HE  C 
Sbjct: 77  SHKGEICPKRIVTCEFCEFPLPAVDLAEHQEVCGNRTELCYQCNSYVRLRERYNHETKCP 136

Query: 145 GVTAADTVAESSRDVGAAPERDQVRDRGARRRQPQEFSTRRLIFTIAITGIAVLLGSLFF 204
           G        ESSR +  A E D     G RRR     S +RL FTIAITGIAV++GSLFF
Sbjct: 137 G------TVESSRRIPRAAEGD---GNGRRRRDGNGVSNKRLFFTIAITGIAVIIGSLFF 192

Query: 205 QRKAE 210
           QRK E
Sbjct: 197 QRKPE 192

[Close]

BLAST of CmoCh09G005860 vs. TAIR 10
Match: AT4G15420.1 (Ubiquitin fusion degradation UFD1 family protein )

HSP 1 Score: 75.5 bits (184), Expect = 5.9e-14
Identity = 42/145 (28.97%), Postives = 67/145 (46.21%), Query Frame = 0


Query: 27  IPSANIDLHSVHC--------------------ARNLEKCKICGDMVPKRHAEEHYLNTH 86
           IPS +I LH V+C                    A+N   C+ CG  +     E+H    H
Sbjct: 410 IPSRSIALHEVYCSRHNVVCNHHGCGIVLRVEEAKNHLHCEKCGKALQPTEMEKHLKVFH 469

Query: 87  APVSCSLCSETMERDILAIHKGENCPQRIVTCEFC----EFPLPAVD-------LAEHQE 141
            P++C  C   +E++ +  H+G++CP R++ C FC    E    A D       ++EH+ 
Sbjct: 470 EPLTCG-CGIVLEKEQMVQHQGKDCPLRLIACRFCGDMVEAGNSAADTRDRMRGMSEHES 529

The following BLAST results are available for this feature:

BLAST of CmoCh09G005860 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
Q4R970	4.8e-21	35.29	TRAF-type zinc finger domain-containing protein 1 OS=Macaca fascicularis OX=9541...	[more]
Q6GPH4	4.8e-21	35.92	XIAP-associated factor 1 OS=Homo sapiens OX=9606 GN=XAF1 PE=1 SV=1	[more]
O14545	1.8e-20	34.45	TRAF-type zinc finger domain-containing protein 1 OS=Homo sapiens OX=9606 GN=TRA...	[more]
Q99MM4	1.8e-20	33.81	TRAF-type zinc finger domain-containing protein 1 OS=Rattus norvegicus OX=10116 ...	[more]
Q3UDK1	3.1e-20	33.81	TRAF-type zinc finger domain-containing protein 1 OS=Mus musculus OX=10090 GN=Tr...	[more]

BLAST of CmoCh09G005860 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A6J1F858	7.1e-108	98.96	XIAP-associated factor 1-like OS=Cucurbita moschata OX=3662 GN=LOC111443198 PE=4...	[more]
A0A6J1IKG6	6.0e-107	97.93	XIAP-associated factor 1-like OS=Cucurbita maxima OX=3661 GN=LOC111476436 PE=4 S...	[more]
A0A1S3CRX9	2.1e-99	90.72	XIAP-associated factor 1 OS=Cucumis melo OX=3656 GN=LOC103503642 PE=4 SV=1	[more]
A0A5D3E5M7	2.1e-99	90.72	XIAP-associated factor 1 OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffol...	[more]
A0A0A0LHP4	1.7e-98	90.72	Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_3G892780 PE=4 SV=1	[more]

BLAST of CmoCh09G005860 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_022936676.1	1.5e-107	98.96	XIAP-associated factor 1-like [Cucurbita moschata]	[more]
XP_023534901.1	9.4e-107	97.93	XIAP-associated factor 1-like [Cucurbita pepo subsp. pepo] >KAG6591703.1 XIAP-as...	[more]
XP_022975863.1	1.2e-106	97.93	XIAP-associated factor 1-like [Cucurbita maxima]	[more]
XP_038897923.1	6.6e-100	91.75	XIAP-associated factor 1 [Benincasa hispida] >XP_038897924.1 XIAP-associated fac...	[more]
XP_008466135.1	4.2e-99	90.72	PREDICTED: XIAP-associated factor 1 [Cucumis melo] >XP_008466136.1 PREDICTED: XI...	[more]

BLAST of CmoCh09G005860 vs. TAIR 10


Match Name	E-value	Identity	Description
AT1G09920.1	1.1e-73	70.81	TRAF-type zinc finger-related	[more]
AT4G15420.1	5.9e-14	28.97	Ubiquitin fusion degradation UFD1 family protein	[more]

InterPro

Analysis Name: InterPro Annotations of Cucurbita moschata (Rifu) v1
Date Performed: 2021-10-25

Position :

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IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR013083	Zinc finger, RING/FYVE/PHD-type	GENE3D	3.30.40.10	Zinc/RING finger domain, C3HC4 (zinc finger)	coord: 65..120 e-value: 1.7E-9 score: 39.9
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 154..177
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 159..177
None	No IPR available	PANTHER	PTHR16295	TRAF-TYPE ZINC FINGER PROTEIN-RELATED	coord: 22..213
None	No IPR available	PANTHER	PTHR16295:SF25	XIAP-ASSOCIATED FACTOR 1-LIKE	coord: 22..213

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
CmoCh09G005860.1	CmoCh09G005860.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
cellular_component	GO:0016021	integral component of membrane
molecular_function	GO:0016829	lyase activity
molecular_function	GO:0008270	zinc ion binding