CmoCh09G005010 (gene) Cucurbita moschata (Rifu) v1

Overview


Name	CmoCh09G005010
Type	gene
Organism	Cucurbita moschata (Cucurbita moschata (Rifu) v1)
Description	Protein of unknown function (DUF1218)
Location	Cmo_Chr09: 2336501 .. 2338568 (+)
RNA-Seq Expression	CmoCh09G005010
Synteny	CmoCh09G005010

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonfive_prime_UTRCDSpolypeptidethree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

AGAGTGGGAGTGGGAGCGGGAACGAAAGCGATTTCCTGTTCTCTTGCTCATTTTTCTTCGTCGTTCAATTCTGTAGGTTTTCTTGCGATTTCTCTTGAATTTCATCGTTGTTTTCTGTGAATATTTTTCGTAAATCACCGTTGCCGCCAATTTTGGTGATCGAATTTTGTTTTGCTGTAGAAATTGGAGGAGAATCTCATGTTTTAGGTATTGTTTAAGTTGTTTATGATTTCTCGGCTTGATTATGGTGTCTAGGTTGGAGCTGAATGGCTGTTACAGAGTAGCTTTCCGTTTGATTGTTCGATTATTAGATTTTAGTTCTATTGTTCTTACTTTCGTGATTCTTCCCCGTGTATGATTTTTTTTTTTTGCTATCAACGGCAAAAGATGATTCTTAAACTGGTTTGCTTAGGGATTCGAAGCAATCAAGCTGAGATCGGAACGTTTGATGTTATTGCTTTTCGTGCGGTGTTTTTTCCCCTAATCTTCTGTCGTATCATTGATCTTCTTTGGAGCTTATAGTGTAGAATCTTTTAGAACACATGACTTGAGGGGAAGCTATTGAGGAGGCTGTAGTTTTCTATTGCGAATTTGGAAAAACTATATTATGTAAAAAAAACCTGCAGTCATAACTTATTCTATCAGATCTGCCTTGTTTTCCATCAGTTCTGAAAACTCTTTTGTTCCCTGCAGGTGACTGGTAACATTTATCTTGGGATCAATGGCCGTGTCTGTCAAGATAATGTCTCTTACTATCGCAACTTTAGGTGTGATATCCTTTATATTTGGAGTCGTAGCTGAGAACAAGAAGGTAAGCTTTTGTTCAGAAATTGTTTGATTCTTACTGTGTAGATATTTGAGGATTGAATTGGTTGTTGTTGAATAGTTTGTCTTTGTCTATATCATAAAGTTAACTTACTCTCGTGTCTTGAGAATTTTCCTCGCTCCCTCGTTAATGGGCACTGTTATTTTTTTTTGTTGTGTTTGCTTATGGGCAGCCTGCATCTGGAACTCCCATCACAGGCAAAGGCATTGTTATCTGTCAGTATCCAGCGGACCCGACTGTGCCCCTGGGATATCTTTCCGTTGCGTTTCTTCTTGCTTCTTCGATTGCAGGATACTTCTCTTTGTTCTATCCTTACCAAGGAAAATCCGTTCCTCGAGGTGCCATGTTTAAGAGCAGCAGTTTCTCTATTTTCTTCAACATTGCCCTGTAAGTTCTCTTTCCAATTCACATCCTTTACTCTAACGGTTAGCTAAAACTTCTAATCTTTGTAGTATTTACTTGTATTATGGTTTCATTAAATTCTTGCTTTTCTCTGAGAATCTACTCCTACGGTTTGATTTGAAACAAGATTTCTTGCATGTTTATCAGTTGAGAGGTGTGTTGTCATCCATTGCCGTATTTATTTGATCACTTTGGATCTGTTTTTATTTTCATTTTGATGAATTCGAGCTGTAATGGATGTTCTTTTTCCCCGAGTCGTTGAATGAATTCGATCCTTGGGATAATACACCACCTAATTATCATCCTCCTTTCCACCCTTAAATAAAATGTGAAATGGAAACGTTGTCAGTCAAACATTCATATCGATCAATGTGGTTTCTGTAAGGCATTGTTGCATATCATTTGAATCCACCCTATGTGTATGCAGGTTCACAACTGGATTGGCTATAACTTTGCTCGTATGGCCTACAGTCACCGAGCAAATTCACTTGACTCACAACGTTCATCACAATCTTGAGGCAGCATGCCCGACCGCTAAGACTGGTCTTCTGGGTGGTGGTGCATTTCTATCCCTTGATTCATCCCTCTTCTGGTTGGTTGCCCTGATGTTGGCTGGAAATGCTCGAGAGGACTACTTTGATGAAATAAAGGAAAACGGAGACAGTGCTGAGGCTCTTAAGAACAGCGCATGAAATTTCTTTGTTCGGTGAGAATAATAATTCAATTTCAATTTACTGTGAATTTACTTGTAACTGACTATTAAGTAAGAACTTGAATGTGAATATGATATTCTAAGGAAGGTTCATCAATGAAATTATATCACGATAGTATGAGTTTTTA

mRNA sequence

AGAGTGGGAGTGGGAGCGGGAACGAAAGCGATTTCCTGTTCTCTTGCTCATTTTTCTTCGTCGTTCAATTCTGTGACTGGTAACATTTATCTTGGGATCAATGGCCGTGTCTGTCAAGATAATGTCTCTTACTATCGCAACTTTAGGTGTGATATCCTTTATATTTGGAGTCGTAGCTGAGAACAAGAAGCCTGCATCTGGAACTCCCATCACAGGCAAAGGCATTGTTATCTGTCAGTATCCAGCGGACCCGACTGTGCCCCTGGGATATCTTTCCGTTGCGTTTCTTCTTGCTTCTTCGATTGCAGGATACTTCTCTTTGTTCTATCCTTACCAAGGAAAATCCGTTCCTCGAGGTGCCATGTTTAAGAGCAGCAGTTTCTCTATTTTCTTCAACATTGCCCTGTTCACAACTGGATTGGCTATAACTTTGCTCGTATGGCCTACAGTCACCGAGCAAATTCACTTGACTCACAACGTTCATCACAATCTTGAGGCAGCATGCCCGACCGCTAAGACTGGTCTTCTGGGTGGTGGTGCATTTCTATCCCTTGATTCATCCCTCTTCTGGTTGGTTGCCCTGATGTTGGCTGGAAATGCTCGAGAGGACTACTTTGATGAAATAAAGGAAAACGGAGACAGTGCTGAGGCTCTTAAGAACAGCGCATGAAATTTCTTTGTTCGGTGAGAATAATAATTCAATTTCAATTTACTGTGAATTTACTTGTAACTGACTATTAAGTAAGAACTTGAATGTGAATATGATATTCTAAGGAAGGTTCATCAATGAAATTATATCACGATAGTATGAGTTTTTA

Coding sequence (CDS)

ATGGCCGTGTCTGTCAAGATAATGTCTCTTACTATCGCAACTTTAGGTGTGATATCCTTTATATTTGGAGTCGTAGCTGAGAACAAGAAGCCTGCATCTGGAACTCCCATCACAGGCAAAGGCATTGTTATCTGTCAGTATCCAGCGGACCCGACTGTGCCCCTGGGATATCTTTCCGTTGCGTTTCTTCTTGCTTCTTCGATTGCAGGATACTTCTCTTTGTTCTATCCTTACCAAGGAAAATCCGTTCCTCGAGGTGCCATGTTTAAGAGCAGCAGTTTCTCTATTTTCTTCAACATTGCCCTGTTCACAACTGGATTGGCTATAACTTTGCTCGTATGGCCTACAGTCACCGAGCAAATTCACTTGACTCACAACGTTCATCACAATCTTGAGGCAGCATGCCCGACCGCTAAGACTGGTCTTCTGGGTGGTGGTGCATTTCTATCCCTTGATTCATCCCTCTTCTGGTTGGTTGCCCTGATGTTGGCTGGAAATGCTCGAGAGGACTACTTTGATGAAATAAAGGAAAACGGAGACAGTGCTGAGGCTCTTAAGAACAGCGCATGA

Protein sequence

MAVSVKIMSLTIATLGVISFIFGVVAENKKPASGTPITGKGIVICQYPADPTVPLGYLSVAFLLASSIAGYFSLFYPYQGKSVPRGAMFKSSSFSIFFNIALFTTGLAITLLVWPTVTEQIHLTHNVHHNLEAACPTAKTGLLGGGAFLSLDSSLFWLVALMLAGNAREDYFDEIKENGDSAEALKNSA

Homology

[Close]

BLAST of CmoCh09G005010 vs. ExPASy TrEMBL
Match: A0A6J1FGG0 (uncharacterized protein LOC111443681 OS=Cucurbita moschata OX=3662 GN=LOC111443681 PE=4 SV=1)

HSP 1 Score: 366.7 bits (940), Expect = 5.8e-98
Identity = 189/189 (100.00%), Postives = 189/189 (100.00%), Query Frame = 0


Query: 1   MAVSVKIMSLTIATLGVISFIFGVVAENKKPASGTPITGKGIVICQYPADPTVPLGYLSV 60
           MAVSVKIMSLTIATLGVISFIFGVVAENKKPASGTPITGKGIVICQYPADPTVPLGYLSV
Sbjct: 1   MAVSVKIMSLTIATLGVISFIFGVVAENKKPASGTPITGKGIVICQYPADPTVPLGYLSV 60

Query: 61  AFLLASSIAGYFSLFYPYQGKSVPRGAMFKSSSFSIFFNIALFTTGLAITLLVWPTVTEQ 120
           AFLLASSIAGYFSLFYPYQGKSVPRGAMFKSSSFSIFFNIALFTTGLAITLLVWPTVTEQ
Sbjct: 61  AFLLASSIAGYFSLFYPYQGKSVPRGAMFKSSSFSIFFNIALFTTGLAITLLVWPTVTEQ 120

Query: 121 IHLTHNVHHNLEAACPTAKTGLLGGGAFLSLDSSLFWLVALMLAGNAREDYFDEIKENGD 180
           IHLTHNVHHNLEAACPTAKTGLLGGGAFLSLDSSLFWLVALMLAGNAREDYFDEIKENGD
Sbjct: 121 IHLTHNVHHNLEAACPTAKTGLLGGGAFLSLDSSLFWLVALMLAGNAREDYFDEIKENGD 180

Query: 181 SAEALKNSA 190
           SAEALKNSA
Sbjct: 181 SAEALKNSA 189

[Close]

BLAST of CmoCh09G005010 vs. ExPASy TrEMBL
Match: A0A6J1FA61 (uncharacterized protein LOC111443679 OS=Cucurbita moschata OX=3662 GN=LOC111443679 PE=4 SV=1)

HSP 1 Score: 353.6 bits (906), Expect = 5.1e-94
Identity = 182/189 (96.30%), Postives = 185/189 (97.88%), Query Frame = 0


Query: 1   MAVSVKIMSLTIATLGVISFIFGVVAENKKPASGTPITGKGIVICQYPADPTVPLGYLSV 60
           MAVSVKIMSLT+ATLGVISFIFGVVAENKKPASGTPI GKGIVICQYPADPTV LGYLSV
Sbjct: 1   MAVSVKIMSLTVATLGVISFIFGVVAENKKPASGTPIPGKGIVICQYPADPTVALGYLSV 60

Query: 61  AFLLASSIAGYFSLFYPYQGKSVPRGAMFKSSSFSIFFNIALFTTGLAITLLVWPTVTEQ 120
           AFLLASSIAGYFSLFYPYQGKSVPRGAMFKSSSFSIFFNIALFTTGLAITLLVWPTVTEQ
Sbjct: 61  AFLLASSIAGYFSLFYPYQGKSVPRGAMFKSSSFSIFFNIALFTTGLAITLLVWPTVTEQ 120

Query: 121 IHLTHNVHHNLEAACPTAKTGLLGGGAFLSLDSSLFWLVALMLAGNAREDYFDEIKENGD 180
           IHLT NVHHNLEAACPTAKTGLLGGGAFLSLDSSLFWLVALMLAGNAREDYFDEI+ENGD
Sbjct: 121 IHLTRNVHHNLEAACPTAKTGLLGGGAFLSLDSSLFWLVALMLAGNAREDYFDEIEENGD 180

Query: 181 SAEALKNSA 190
           S EALKN+A
Sbjct: 181 SVEALKNNA 189

[Close]

BLAST of CmoCh09G005010 vs. ExPASy TrEMBL
Match: A0A6J1IF65 (uncharacterized protein LOC111476666 OS=Cucurbita maxima OX=3661 GN=LOC111476666 PE=4 SV=1)

HSP 1 Score: 347.4 bits (890), Expect = 3.7e-92
Identity = 178/189 (94.18%), Postives = 183/189 (96.83%), Query Frame = 0


Query: 1   MAVSVKIMSLTIATLGVISFIFGVVAENKKPASGTPITGKGIVICQYPADPTVPLGYLSV 60
           MAVSVKIMSLT+ TLGVISFIFGVVAENKKPASGTPI GKGIVICQYPADPTV LGYLSV
Sbjct: 1   MAVSVKIMSLTVTTLGVISFIFGVVAENKKPASGTPIPGKGIVICQYPADPTVALGYLSV 60

Query: 61  AFLLASSIAGYFSLFYPYQGKSVPRGAMFKSSSFSIFFNIALFTTGLAITLLVWPTVTEQ 120
           AFLLASSIAGYFSLFYPYQGKSVPRGAMFKSS+FSIFFNIALFTTGLAITLL+WPTV EQ
Sbjct: 61  AFLLASSIAGYFSLFYPYQGKSVPRGAMFKSSTFSIFFNIALFTTGLAITLLLWPTVIEQ 120

Query: 121 IHLTHNVHHNLEAACPTAKTGLLGGGAFLSLDSSLFWLVALMLAGNAREDYFDEIKENGD 180
           IHLT NVHHNLEAACPTAKTGLLGGGAFLSLDSSLFWLV LMLAGNAREDYFDEI+ENGD
Sbjct: 121 IHLTRNVHHNLEAACPTAKTGLLGGGAFLSLDSSLFWLVTLMLAGNAREDYFDEIEENGD 180

Query: 181 SAEALKNSA 190
           SAEALKN+A
Sbjct: 181 SAEALKNNA 189

[Close]

BLAST of CmoCh09G005010 vs. ExPASy TrEMBL
Match: A0A6J1ILG3 (uncharacterized protein LOC111476667 OS=Cucurbita maxima OX=3661 GN=LOC111476667 PE=4 SV=1)

HSP 1 Score: 335.1 bits (858), Expect = 1.9e-88
Identity = 174/189 (92.06%), Postives = 177/189 (93.65%), Query Frame = 0


Query: 1   MAVSVKIMSLTIATLGVISFIFGVVAENKKPASGTPITGKGIVICQYPADPTVPLGYLSV 60
           MAVSVKIMSLT+ATLGVISFIFGVVAENKKPASGTPI GKGIVIC+YPADPTV LGYLSV
Sbjct: 1   MAVSVKIMSLTVATLGVISFIFGVVAENKKPASGTPIPGKGIVICKYPADPTVALGYLSV 60

Query: 61  AFLLASSIAGYFSLFYPYQGKSVPRGAMFKSSSFSIFFNIALFTTGLAITLLVWPTVTEQ 120
           AFLLASSIAGYFSLFYPYQGKS PRGAMFKSSSFSIFFNIALFTTGLAITLLVWPTVTEQ
Sbjct: 61  AFLLASSIAGYFSLFYPYQGKSAPRGAMFKSSSFSIFFNIALFTTGLAITLLVWPTVTEQ 120

Query: 121 IHLTHNVHHNLEAACPTAKTGLLGGGAFLSLDSSLFWLVALMLAGNAREDYFDEIKENGD 180
           IHLT NVH NLE ACPTAKTGLLGGGAFLSLDSSLFWLVALMLA NAREDYFDEI+E G 
Sbjct: 121 IHLTRNVHQNLETACPTAKTGLLGGGAFLSLDSSLFWLVALMLAENAREDYFDEIEEKGA 180

Query: 181 SAEALKNSA 190
           S E LKN A
Sbjct: 181 SGEPLKNDA 189

[Close]

BLAST of CmoCh09G005010 vs. ExPASy TrEMBL
Match: A0A6J1EUE5 (uncharacterized protein LOC111436725 OS=Cucurbita moschata OX=3662 GN=LOC111436725 PE=4 SV=1)

HSP 1 Score: 334.7 bits (857), Expect = 2.5e-88
Identity = 172/189 (91.01%), Postives = 178/189 (94.18%), Query Frame = 0


Query: 1   MAVSVKIMSLTIATLGVISFIFGVVAENKKPASGTPITGKGIVICQYPADPTVPLGYLSV 60
           M VS+KIMSL IATLGVISFIFGVVAENKKPASGTPI GKGIVICQYPADPTV  GYLSV
Sbjct: 1   MTVSIKIMSLIIATLGVISFIFGVVAENKKPASGTPIPGKGIVICQYPADPTVAFGYLSV 60

Query: 61  AFLLASSIAGYFSLFYPYQGKSVPRGAMFKSSSFSIFFNIALFTTGLAITLLVWPTVTEQ 120
           AFLLASSIAGYFSLFYPYQ K VPRGA+FKS+SFSIFFNI LFTTGLAITLL+WPTVTEQ
Sbjct: 61  AFLLASSIAGYFSLFYPYQRKFVPRGALFKSTSFSIFFNITLFTTGLAITLLIWPTVTEQ 120

Query: 121 IHLTHNVHHNLEAACPTAKTGLLGGGAFLSLDSSLFWLVALMLAGNAREDYFDEIKENGD 180
           IHLT NVHHNLE AC TAKTGLLGGGAFLSLDSSLFWLV+LMLAGNAREDYFDEI+ENGD
Sbjct: 121 IHLTRNVHHNLETACLTAKTGLLGGGAFLSLDSSLFWLVSLMLAGNAREDYFDEIEENGD 180

Query: 181 SAEALKNSA 190
           SAEALKNSA
Sbjct: 181 SAEALKNSA 189

[Close]

BLAST of CmoCh09G005010 vs. NCBI nr
Match: XP_022937374.1 (uncharacterized protein LOC111443681 [Cucurbita moschata] >XP_022937375.1 uncharacterized protein LOC111443681 [Cucurbita moschata] >XP_022937377.1 uncharacterized protein LOC111443681 [Cucurbita moschata])

HSP 1 Score: 366.7 bits (940), Expect = 1.2e-97
Identity = 189/189 (100.00%), Postives = 189/189 (100.00%), Query Frame = 0


Query: 1   MAVSVKIMSLTIATLGVISFIFGVVAENKKPASGTPITGKGIVICQYPADPTVPLGYLSV 60
           MAVSVKIMSLTIATLGVISFIFGVVAENKKPASGTPITGKGIVICQYPADPTVPLGYLSV
Sbjct: 1   MAVSVKIMSLTIATLGVISFIFGVVAENKKPASGTPITGKGIVICQYPADPTVPLGYLSV 60

Query: 61  AFLLASSIAGYFSLFYPYQGKSVPRGAMFKSSSFSIFFNIALFTTGLAITLLVWPTVTEQ 120
           AFLLASSIAGYFSLFYPYQGKSVPRGAMFKSSSFSIFFNIALFTTGLAITLLVWPTVTEQ
Sbjct: 61  AFLLASSIAGYFSLFYPYQGKSVPRGAMFKSSSFSIFFNIALFTTGLAITLLVWPTVTEQ 120

Query: 121 IHLTHNVHHNLEAACPTAKTGLLGGGAFLSLDSSLFWLVALMLAGNAREDYFDEIKENGD 180
           IHLTHNVHHNLEAACPTAKTGLLGGGAFLSLDSSLFWLVALMLAGNAREDYFDEIKENGD
Sbjct: 121 IHLTHNVHHNLEAACPTAKTGLLGGGAFLSLDSSLFWLVALMLAGNAREDYFDEIKENGD 180

Query: 181 SAEALKNSA 190
           SAEALKNSA
Sbjct: 181 SAEALKNSA 189

[Close]

BLAST of CmoCh09G005010 vs. NCBI nr
Match: XP_023536512.1 (uncharacterized protein LOC111797667 [Cucurbita pepo subsp. pepo] >XP_023536513.1 uncharacterized protein LOC111797667 [Cucurbita pepo subsp. pepo])

HSP 1 Score: 354.0 bits (907), Expect = 8.1e-94
Identity = 181/189 (95.77%), Postives = 186/189 (98.41%), Query Frame = 0


Query: 1   MAVSVKIMSLTIATLGVISFIFGVVAENKKPASGTPITGKGIVICQYPADPTVPLGYLSV 60
           MAVSVKIMSLT+ATLGVISFIFGV+AENKKPASGTPI GKGIVICQYPADPTV LGYLSV
Sbjct: 1   MAVSVKIMSLTVATLGVISFIFGVIAENKKPASGTPIPGKGIVICQYPADPTVALGYLSV 60

Query: 61  AFLLASSIAGYFSLFYPYQGKSVPRGAMFKSSSFSIFFNIALFTTGLAITLLVWPTVTEQ 120
           AFLLASSIAGYFSLFYPYQGKSVPRGAMFKSSSFSIF NIALFTTGLAITLLVWPTVTEQ
Sbjct: 61  AFLLASSIAGYFSLFYPYQGKSVPRGAMFKSSSFSIFLNIALFTTGLAITLLVWPTVTEQ 120

Query: 121 IHLTHNVHHNLEAACPTAKTGLLGGGAFLSLDSSLFWLVALMLAGNAREDYFDEIKENGD 180
           IHLTHNVHHNLEAACPTAKTGLLGGGAFLSLDSSLFWLVALMLAGNAREDYFDEI+ENGD
Sbjct: 121 IHLTHNVHHNLEAACPTAKTGLLGGGAFLSLDSSLFWLVALMLAGNAREDYFDEIEENGD 180

Query: 181 SAEALKNSA 190
           SA+ALKN+A
Sbjct: 181 SAKALKNNA 189

[Close]

BLAST of CmoCh09G005010 vs. NCBI nr
Match: XP_022937371.1 (uncharacterized protein LOC111443679 [Cucurbita moschata] >XP_022937372.1 uncharacterized protein LOC111443679 [Cucurbita moschata] >XP_022937373.1 uncharacterized protein LOC111443679 [Cucurbita moschata])

HSP 1 Score: 353.6 bits (906), Expect = 1.1e-93
Identity = 182/189 (96.30%), Postives = 185/189 (97.88%), Query Frame = 0


Query: 1   MAVSVKIMSLTIATLGVISFIFGVVAENKKPASGTPITGKGIVICQYPADPTVPLGYLSV 60
           MAVSVKIMSLT+ATLGVISFIFGVVAENKKPASGTPI GKGIVICQYPADPTV LGYLSV
Sbjct: 1   MAVSVKIMSLTVATLGVISFIFGVVAENKKPASGTPIPGKGIVICQYPADPTVALGYLSV 60

Query: 61  AFLLASSIAGYFSLFYPYQGKSVPRGAMFKSSSFSIFFNIALFTTGLAITLLVWPTVTEQ 120
           AFLLASSIAGYFSLFYPYQGKSVPRGAMFKSSSFSIFFNIALFTTGLAITLLVWPTVTEQ
Sbjct: 61  AFLLASSIAGYFSLFYPYQGKSVPRGAMFKSSSFSIFFNIALFTTGLAITLLVWPTVTEQ 120

Query: 121 IHLTHNVHHNLEAACPTAKTGLLGGGAFLSLDSSLFWLVALMLAGNAREDYFDEIKENGD 180
           IHLT NVHHNLEAACPTAKTGLLGGGAFLSLDSSLFWLVALMLAGNAREDYFDEI+ENGD
Sbjct: 121 IHLTRNVHHNLEAACPTAKTGLLGGGAFLSLDSSLFWLVALMLAGNAREDYFDEIEENGD 180

Query: 181 SAEALKNSA 190
           S EALKN+A
Sbjct: 181 SVEALKNNA 189

[Close]

BLAST of CmoCh09G005010 vs. NCBI nr
Match: XP_023536367.1 (uncharacterized protein LOC111797557 [Cucurbita pepo subsp. pepo])

HSP 1 Score: 349.0 bits (894), Expect = 2.6e-92
Identity = 180/189 (95.24%), Postives = 184/189 (97.35%), Query Frame = 0


Query: 1   MAVSVKIMSLTIATLGVISFIFGVVAENKKPASGTPITGKGIVICQYPADPTVPLGYLSV 60
           M VSVKIMSLT+ATLGVISFIFGVVAENKKPASGTPI  KGIVICQYPADPTV LGYLSV
Sbjct: 1   MVVSVKIMSLTVATLGVISFIFGVVAENKKPASGTPIPSKGIVICQYPADPTVALGYLSV 60

Query: 61  AFLLASSIAGYFSLFYPYQGKSVPRGAMFKSSSFSIFFNIALFTTGLAITLLVWPTVTEQ 120
           AFLLASSIAGYFSLFYPYQGKSVPRGAMFKSSSFSIFFNIALFTTGLAITLLVWPTVTEQ
Sbjct: 61  AFLLASSIAGYFSLFYPYQGKSVPRGAMFKSSSFSIFFNIALFTTGLAITLLVWPTVTEQ 120

Query: 121 IHLTHNVHHNLEAACPTAKTGLLGGGAFLSLDSSLFWLVALMLAGNAREDYFDEIKENGD 180
           IHLT NVH+NLEAACPTAKTGLLGGGAFLSLDSSLFWLVALMLAGNAREDYFDEI+ENGD
Sbjct: 121 IHLTRNVHYNLEAACPTAKTGLLGGGAFLSLDSSLFWLVALMLAGNAREDYFDEIEENGD 180

Query: 181 SAEALKNSA 190
           SAEALKN+A
Sbjct: 181 SAEALKNNA 189

[Close]

BLAST of CmoCh09G005010 vs. NCBI nr
Match: XP_022976207.1 (uncharacterized protein LOC111476666 [Cucurbita maxima] >XP_022976208.1 uncharacterized protein LOC111476666 [Cucurbita maxima] >XP_022976209.1 uncharacterized protein LOC111476666 [Cucurbita maxima])

HSP 1 Score: 347.4 bits (890), Expect = 7.6e-92
Identity = 178/189 (94.18%), Postives = 183/189 (96.83%), Query Frame = 0


Query: 1   MAVSVKIMSLTIATLGVISFIFGVVAENKKPASGTPITGKGIVICQYPADPTVPLGYLSV 60
           MAVSVKIMSLT+ TLGVISFIFGVVAENKKPASGTPI GKGIVICQYPADPTV LGYLSV
Sbjct: 1   MAVSVKIMSLTVTTLGVISFIFGVVAENKKPASGTPIPGKGIVICQYPADPTVALGYLSV 60

Query: 61  AFLLASSIAGYFSLFYPYQGKSVPRGAMFKSSSFSIFFNIALFTTGLAITLLVWPTVTEQ 120
           AFLLASSIAGYFSLFYPYQGKSVPRGAMFKSS+FSIFFNIALFTTGLAITLL+WPTV EQ
Sbjct: 61  AFLLASSIAGYFSLFYPYQGKSVPRGAMFKSSTFSIFFNIALFTTGLAITLLLWPTVIEQ 120

Query: 121 IHLTHNVHHNLEAACPTAKTGLLGGGAFLSLDSSLFWLVALMLAGNAREDYFDEIKENGD 180
           IHLT NVHHNLEAACPTAKTGLLGGGAFLSLDSSLFWLV LMLAGNAREDYFDEI+ENGD
Sbjct: 121 IHLTRNVHHNLEAACPTAKTGLLGGGAFLSLDSSLFWLVTLMLAGNAREDYFDEIEENGD 180

Query: 181 SAEALKNSA 190
           SAEALKN+A
Sbjct: 181 SAEALKNNA 189

[Close]

BLAST of CmoCh09G005010 vs. TAIR 10
Match: AT4G31130.1 (Protein of unknown function (DUF1218) )

HSP 1 Score: 270.8 bits (691), Expect = 8.4e-73
Identity = 130/176 (73.86%), Postives = 157/176 (89.20%), Query Frame = 0


Query: 1   MAVSVKIMSLTIATLGVISFIFGVVAENKKPASGTPITGKGIVICQYPADPTVPLGYLSV 60
           MAVS+K MSL ++ LGV+SF+ GV+AENKKPASGTPI+GKG+VIC+YP+DPTV LGYLS 
Sbjct: 1   MAVSMKQMSLVVSALGVLSFVLGVIAENKKPASGTPISGKGVVICKYPSDPTVALGYLSA 60

Query: 61  AFLLASSIAGYFSLFYPYQGKSVPRGAMFKSSSFSIFFNIALFTTGLAITLLVWPTVTEQ 120
           AFLLA ++AGY SLF  Y+GKSVP   +FKS+SFS+FFNIAL T+GLA++LL+WPT+TEQ
Sbjct: 61  AFLLACTVAGYKSLFISYKGKSVPNSVLFKSTSFSVFFNIALITSGLALSLLLWPTITEQ 120

Query: 121 IHLTHNVHHNLEAACPTAKTGLLGGGAFLSLDSSLFWLVALMLAGNAREDYFDEIK 177
           +HLT NVH NLE +CPTAKTGLLGGGAF+SLDS LFWLVALMLA NARED+FDE++
Sbjct: 121 LHLTRNVHRNLETSCPTAKTGLLGGGAFVSLDSCLFWLVALMLADNAREDHFDEVE 176

The following BLAST results are available for this feature:

BLAST of CmoCh09G005010 vs.


Match Name	E-value	Identity	Description

BLAST of CmoCh09G005010 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A6J1FGG0	5.8e-98	100.00	uncharacterized protein LOC111443681 OS=Cucurbita moschata OX=3662 GN=LOC1114436...	[more]
A0A6J1FA61	5.1e-94	96.30	uncharacterized protein LOC111443679 OS=Cucurbita moschata OX=3662 GN=LOC1114436...	[more]
A0A6J1IF65	3.7e-92	94.18	uncharacterized protein LOC111476666 OS=Cucurbita maxima OX=3661 GN=LOC111476666...	[more]
A0A6J1ILG3	1.9e-88	92.06	uncharacterized protein LOC111476667 OS=Cucurbita maxima OX=3661 GN=LOC111476667...	[more]
A0A6J1EUE5	2.5e-88	91.01	uncharacterized protein LOC111436725 OS=Cucurbita moschata OX=3662 GN=LOC1114367...	[more]

BLAST of CmoCh09G005010 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_022937374.1	1.2e-97	100.00	uncharacterized protein LOC111443681 [Cucurbita moschata] >XP_022937375.1 unchar...	[more]
XP_023536512.1	8.1e-94	95.77	uncharacterized protein LOC111797667 [Cucurbita pepo subsp. pepo] >XP_023536513....	[more]
XP_022937371.1	1.1e-93	96.30	uncharacterized protein LOC111443679 [Cucurbita moschata] >XP_022937372.1 unchar...	[more]
XP_023536367.1	2.6e-92	95.24	uncharacterized protein LOC111797557 [Cucurbita pepo subsp. pepo]	[more]
XP_022976207.1	7.6e-92	94.18	uncharacterized protein LOC111476666 [Cucurbita maxima] >XP_022976208.1 uncharac...	[more]

BLAST of CmoCh09G005010 vs. TAIR 10


Match Name	E-value	Identity	Description
AT4G31130.1	8.4e-73	73.86	Protein of unknown function (DUF1218)	[more]

InterPro

Analysis Name: InterPro Annotations of Cucurbita moschata (Rifu) v1
Date Performed: 2021-10-25

Position :

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IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR009606	Modifying wall lignin-1/2	PFAM	PF06749	DUF1218	coord: 60..154 e-value: 1.5E-13 score: 51.0
None	No IPR available	PANTHER	PTHR31769:SF9	OS05G0465400 PROTEIN	coord: 1..181
None	No IPR available	PANTHER	PTHR31769	OS07G0462200 PROTEIN-RELATED	coord: 1..181

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
CmoCh09G005010.1	CmoCh09G005010.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
cellular_component	GO:0016021	integral component of membrane