CmoCh09G004280 (gene) Cucurbita moschata (Rifu) v1
Overview
Sequences
The following sequences are available for this feature:
Legend: polypeptideexonCDSthree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below.ATGGCGGGCGTTTTCCGATCAGCTCACCGGCGGATTCGATCATCCTACAGTAAAATCCTTACTCGTCGATTATGGCGGCGCCATTGTTCGCCTTCACAAAGCACCATAATCTCAACATCGCTCTTCACCAGGTCATTTGTTTCCGCTGCCAATCCCAAATCTACCTTCGATGCCATCACTCTCAGAGTACTTCGTAACGAGATCGAGTACCAGTCCGATTACGCTCCTCCCCATCTGGTTCGCCGACTCGTTTTCTTCCTTATTTCGATCCATTTCCTCGTTCTACTTTTTGCAATTTGTTTCACCTAATTTGAGATTTGGATTATCATTTAGAATGTTTGCTTTAATTTTTCTGCTGCGGAATTTTACAGCCTGCAATGAGGTTCAATTCATTTGCGGTTGAAGACCGACCGGGAATGCAGTGGATTACATTGAAAGGAAAATTTGGTGACACTGAAGATATTAAAATTGAAGCGACGATGTTTGATGGCTGCAAATCTGTTCCTAAACTTGGAGACGATATCGATGGTGAAGAAGACCTCCGTCTTCACAGTAGCGTGCTTGTTGACATTTCGAAGAGGGATGGTTCGGACTATTTGGAGTTCGTGTGCTCGGCATGGCCTGATTCGTTGGAGATTCAGAAACTATATGTTCTTAAGCGAGATAGAATGCTTTCAAGACCCTATATGGGGCCTGATTTTAGGTATTGCTCATCTCAAATTCAAAGTTACTTGTCATTTATGTGAATTTGTTGCTACCTTGGCCACTTTTGTTGGTTAATAACAGATTACTGCCCATTTTGGTCTGGATTTGGATGCCATAATATGTTGCCTCTAATAAGTGATCCATGCTAAGTGCAAGTTCAAAATCTATCTGCTCTTTTCATCTACTCCATATAGGCTTGAAATATAGTTTAAAATTTTTCTAACTTACATTCACCGGTATTGAATTGTCAGCCACAATGTTGTAATCCCTCAAATGATTTATCCAATATCGGTAAGTGCTTCAAAACACTTTTTTCTTAACAGTTATAAACACTTTTTCAGGACTTAGAAAGTCATTCCAAACCAATAATTTGAGGTGACCAAGTTGCGCGTCTCTGCAAGGCGATGCTGCCTAGGGTGACCTCGCCTCTGTTGAAGTCAGCGCAAGCGTCTTCAAGAAGGCACTCGCCATACTGTGCCTTCACGTGCCTGTTGGCGCCTTTGTCACACACCGGATTATATTGAATGTTTCTGATATTTTAATGTTTTTCTATTTAGTATCAATCTTCAAAGCTTTGAAATTTGGATGTTTTTACAATGTATGCTCTCAATATATCCGTTTTGCCACCTCTCCCCTTGAGGCGATCGAGGGGTTTGTTGCCTTGAGGTTCACCTTGCACTTTGAAAATAGTTCCAAACAGGCCATAAGTTAACTAAAGTTAAGGATTAAGCTTGTTGTTCTTCAACTCATGTTGTCTACAAATGATCTTTTTGGGTTTTTGTTGACTTCAGGGAATTGAGTAGCGAAATTCAGACGGAATTTCGGGAGTTCTTAGCAGAAAGGAGGATAGATAAGGAGCTTGCTGTATTTTTGCATGAATATATGATGAACAAGGACAGATGTGAACTTATTCGATGGTTGGCAACTGTCAAGACCTTTGTGGAAAGATAAATCATACGCTTCTTTGGCACCATCAAACATGGTTGTTACCATTTTAAGGTATTCAAGGATTATGTTTTTCTTCCTTTTTATAATCAATTGCTATCCATAGTTCATCAATCATGATTAGTTTTAACATATGTACAGTTGTTTTCTCTTTATGGGGTCAGTGAGATTGCGTTAATGGAAAAAAGAGGTGACAAAAAGGTAAAGGAAAATTAGACAGTCAGAGTGATTACAAACAGGTAGAACTTAGTGTCTATGGTAAATTTCAAATGCTTTCTACCAGTTGGCCAAGAACACCCTGAAAAGGGAAAAGCATGGTTACAACTTAAAAAAAAAGTCTTGAAAATTGGTCCTAGTATAATCATTGCAAGAAATTACTGCACTATTGTTTGTTTCCTCAGATTACTACTGATTATATGGTGCAAACTATGTGGTTTTCTGCCTGTGATGTTTGTTATCAATGTTGTTT ATGGCGGGCGTTTTCCGATCAGCTCACCGGCGGATTCGATCATCCTACAGTAAAATCCTTACTCGTCGATTATGGCGGCGCCATTGTTCGCCTTCACAAAGCACCATAATCTCAACATCGCTCTTCACCAGGTCATTTGTTTCCGCTGCCAATCCCAAATCTACCTTCGATGCCATCACTCTCAGAGTACTTCGTAACGAGATCGAGTACCAGTCCGATTACGCTCCTCCCCATCTGGTTCGCCGACTCCCTGCAATGAGGTTCAATTCATTTGCGGTTGAAGACCGACCGGGAATGCAGTGGATTACATTGAAAGGAAAATTTGGTGACACTGAAGATATTAAAATTGAAGCGACGATGTTTGATGGCTGCAAATCTGTTCCTAAACTTGGAGACGATATCGATGGTGAAGAAGACCTCCGTCTTCACAGTAGCGTGCTTGTTGACATTTCGAAGAGGGATGGTTCGGACTATTTGGAGTTCGTGTGCTCGGCATGGCCTGATTCGTTGGAGATTCAGAAACTATATGTTCTTAAGCGAGATAGAATGCTTTCAAGACCCTATATGGGGCCTGATTTTAGGGAATTGAGTAGCGAAATTCAGACGGAATTTCGGGAGTTCTTAGCAGAAAGGAGGATAGATAAGGAGCTTGCTGTATTTTTGCATGAATATATGATGAACAAGGACAGATGTGAACTTATTCGATGGTTGGCAACTGTCAAGACCTTTGTGGAAAGATAAATCATACGCTTCTTTGGCACCATCAAACATGGTTGTTACCATTTTAAGTTGTTTTCTCTTTATGGGGTCAGTGAGATTGCGTTAATGGAAAAAAGAGGTGACAAAAAGGTAAAGGAAAATTAGACAGTCAGAGTGATTACAAACAGGTAGAACTTAGTGTCTATGGTAAATTTCAAATGCTTTCTACCAGTTGGCCAAGAACACCCTGAAAAGGGAAAAGCATGGTTACAACTTAAAAAAAAAGTCTTGAAAATTGGTCCTAGTATAATCATTGCAAGAAATTACTGCACTATTGTTTGTTTCCTCAGATTACTACTGATTATATGGTGCAAACTATGTGGTTTTCTGCCTGTGATGTTTGTTATCAATGTTGTTT ATGGCGGGCGTTTTCCGATCAGCTCACCGGCGGATTCGATCATCCTACAGTAAAATCCTTACTCGTCGATTATGGCGGCGCCATTGTTCGCCTTCACAAAGCACCATAATCTCAACATCGCTCTTCACCAGGTCATTTGTTTCCGCTGCCAATCCCAAATCTACCTTCGATGCCATCACTCTCAGAGTACTTCGTAACGAGATCGAGTACCAGTCCGATTACGCTCCTCCCCATCTGGTTCGCCGACTCCCTGCAATGAGGTTCAATTCATTTGCGGTTGAAGACCGACCGGGAATGCAGTGGATTACATTGAAAGGAAAATTTGGTGACACTGAAGATATTAAAATTGAAGCGACGATGTTTGATGGCTGCAAATCTGTTCCTAAACTTGGAGACGATATCGATGGTGAAGAAGACCTCCGTCTTCACAGTAGCGTGCTTGTTGACATTTCGAAGAGGGATGGTTCGGACTATTTGGAGTTCGTGTGCTCGGCATGGCCTGATTCGTTGGAGATTCAGAAACTATATGTTCTTAAGCGAGATAGAATGCTTTCAAGACCCTATATGGGGCCTGATTTTAGGGAATTGAGTAGCGAAATTCAGACGGAATTTCGGGAGTTCTTAGCAGAAAGGAGGATAGATAAGGAGCTTGCTGTATTTTTGCATGAATATATGATGAACAAGGACAGATGTGAACTTATTCGATGGTTGGCAACTGTCAAGACCTTTGTGGAAAGATAA MAGVFRSAHRRIRSSYSKILTRRLWRRHCSPSQSTIISTSLFTRSFVSAANPKSTFDAITLRVLRNEIEYQSDYAPPHLVRRLPAMRFNSFAVEDRPGMQWITLKGKFGDTEDIKIEATMFDGCKSVPKLGDDIDGEEDLRLHSSVLVDISKRDGSDYLEFVCSAWPDSLEIQKLYVLKRDRMLSRPYMGPDFRELSSEIQTEFREFLAERRIDKELAVFLHEYMMNKDRCELIRWLATVKTFVER Homology
BLAST of CmoCh09G004280 vs. ExPASy Swiss-Prot
Match: O94675 (Mitochondrial acidic protein mam33 OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843) OX=284812 GN=SPBC776.07 PE=3 SV=1) HSP 1 Score: 85.9 bits (211), Expect = 7.0e-16 Identity = 78/275 (28.36%), Postives = 127/275 (46.18%), Query Frame = 0
BLAST of CmoCh09G004280 vs. ExPASy Swiss-Prot
Match: Q8W487 (Uncharacterized protein At2g39795, mitochondrial OS=Arabidopsis thaliana OX=3702 GN=At2g39795 PE=1 SV=1) HSP 1 Score: 75.9 bits (185), Expect = 7.3e-13 Identity = 77/254 (30.31%), Postives = 114/254 (44.88%), Query Frame = 0
BLAST of CmoCh09G004280 vs. ExPASy Swiss-Prot
Match: O22288 (Uncharacterized protein At2g39790, mitochondrial OS=Arabidopsis thaliana OX=3702 GN=At2g39790 PE=3 SV=2) HSP 1 Score: 67.4 bits (163), Expect = 2.6e-10 Identity = 46/156 (29.49%), Postives = 77/156 (49.36%), Query Frame = 0
BLAST of CmoCh09G004280 vs. ExPASy TrEMBL
Match: A0A6J1FEC0 (mitochondrial acidic protein mam33-like isoform X1 OS=Cucurbita moschata OX=3662 GN=LOC111443189 PE=4 SV=1) HSP 1 Score: 482.6 bits (1241), Expect = 9.5e-133 Identity = 242/246 (98.37%), Postives = 242/246 (98.37%), Query Frame = 0
BLAST of CmoCh09G004280 vs. ExPASy TrEMBL
Match: A0A6J1D8I6 (uncharacterized protein At2g39795, mitochondrial OS=Momordica charantia OX=3673 GN=LOC111018319 PE=4 SV=1) HSP 1 Score: 402.1 bits (1032), Expect = 1.6e-108 Identity = 197/246 (80.08%), Postives = 219/246 (89.02%), Query Frame = 0
BLAST of CmoCh09G004280 vs. ExPASy TrEMBL
Match: A0A1S3BUU9 (uncharacterized protein At2g39795, mitochondrial OS=Cucumis melo OX=3656 GN=LOC103493767 PE=4 SV=1) HSP 1 Score: 396.0 bits (1016), Expect = 1.2e-106 Identity = 198/246 (80.49%), Postives = 215/246 (87.40%), Query Frame = 0
BLAST of CmoCh09G004280 vs. ExPASy TrEMBL
Match: A0A0A0L152 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_4G652120 PE=4 SV=1) HSP 1 Score: 396.0 bits (1016), Expect = 1.2e-106 Identity = 197/246 (80.08%), Postives = 214/246 (86.99%), Query Frame = 0
BLAST of CmoCh09G004280 vs. ExPASy TrEMBL
Match: A0A6J1IUX2 (uncharacterized protein At2g39795, mitochondrial-like OS=Cucurbita maxima OX=3661 GN=LOC111480818 PE=4 SV=1) HSP 1 Score: 393.7 bits (1010), Expect = 5.8e-106 Identity = 198/246 (80.49%), Postives = 217/246 (88.21%), Query Frame = 0
BLAST of CmoCh09G004280 vs. NCBI nr
Match: XP_022936658.1 (mitochondrial acidic protein mam33-like isoform X1 [Cucurbita moschata] >XP_022936659.1 mitochondrial acidic protein mam33-like isoform X1 [Cucurbita moschata] >XP_022936660.1 mitochondrial acidic protein mam33-like isoform X1 [Cucurbita moschata] >XP_022936661.1 mitochondrial acidic protein mam33-like isoform X1 [Cucurbita moschata]) HSP 1 Score: 482.6 bits (1241), Expect = 2.0e-132 Identity = 242/246 (98.37%), Postives = 242/246 (98.37%), Query Frame = 0
BLAST of CmoCh09G004280 vs. NCBI nr
Match: KAG7024431.1 (hypothetical protein SDJN02_13246 [Cucurbita argyrosperma subsp. argyrosperma]) HSP 1 Score: 470.7 bits (1210), Expect = 7.7e-129 Identity = 236/246 (95.93%), Postives = 239/246 (97.15%), Query Frame = 0
BLAST of CmoCh09G004280 vs. NCBI nr
Match: KAG6591546.1 (hypothetical protein SDJN03_13892, partial [Cucurbita argyrosperma subsp. sororia]) HSP 1 Score: 467.2 bits (1201), Expect = 8.5e-128 Identity = 235/246 (95.53%), Postives = 237/246 (96.34%), Query Frame = 0
BLAST of CmoCh09G004280 vs. NCBI nr
Match: XP_023534978.1 (mitochondrial acidic protein mam33-like [Cucurbita pepo subsp. pepo] >XP_023534979.1 mitochondrial acidic protein mam33-like [Cucurbita pepo subsp. pepo] >XP_023534980.1 mitochondrial acidic protein mam33-like [Cucurbita pepo subsp. pepo] >XP_023534981.1 mitochondrial acidic protein mam33-like [Cucurbita pepo subsp. pepo] >XP_023534982.1 mitochondrial acidic protein mam33-like [Cucurbita pepo subsp. pepo]) HSP 1 Score: 465.7 bits (1197), Expect = 2.5e-127 Identity = 233/246 (94.72%), Postives = 236/246 (95.93%), Query Frame = 0
BLAST of CmoCh09G004280 vs. NCBI nr
Match: XP_038896995.1 (uncharacterized protein At2g39795, mitochondrial [Benincasa hispida] >XP_038896996.1 uncharacterized protein At2g39795, mitochondrial [Benincasa hispida]) HSP 1 Score: 433.3 bits (1113), Expect = 1.4e-117 Identity = 213/246 (86.59%), Postives = 228/246 (92.68%), Query Frame = 0
BLAST of CmoCh09G004280 vs. TAIR 10
Match: AT4G31930.1 (Mitochondrial glycoprotein family protein ) HSP 1 Score: 232.6 bits (592), Expect = 3.3e-61 Identity = 127/237 (53.59%), Postives = 161/237 (67.93%), Query Frame = 0
BLAST of CmoCh09G004280 vs. TAIR 10
Match: AT1G15870.1 (Mitochondrial glycoprotein family protein ) HSP 1 Score: 179.1 bits (453), Expect = 4.3e-45 Identity = 106/249 (42.57%), Postives = 150/249 (60.24%), Query Frame = 0
BLAST of CmoCh09G004280 vs. TAIR 10
Match: AT1G80720.1 (Mitochondrial glycoprotein family protein ) HSP 1 Score: 177.6 bits (449), Expect = 1.3e-44 Identity = 92/194 (47.42%), Postives = 123/194 (63.40%), Query Frame = 0
BLAST of CmoCh09G004280 vs. TAIR 10
Match: AT5G05990.1 (Mitochondrial glycoprotein family protein ) HSP 1 Score: 92.0 bits (227), Expect = 7.0e-19 Identity = 72/239 (30.13%), Postives = 114/239 (47.70%), Query Frame = 0
BLAST of CmoCh09G004280 vs. TAIR 10
Match: AT5G02050.1 (Mitochondrial glycoprotein family protein ) HSP 1 Score: 77.0 bits (188), Expect = 2.3e-14 Identity = 74/254 (29.13%), Postives = 114/254 (44.88%), Query Frame = 0
The following BLAST results are available for this feature:
InterPro
Analysis Name: InterPro Annotations of Cucurbita moschata (Rifu) v1
Date Performed: 2021-10-25
Relationships
The following mRNA feature(s) are a part of this gene:
GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
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