CmoCh09G004270 (gene) Cucurbita moschata (Rifu) v1

Overview


Name	CmoCh09G004270
Type	gene
Organism	Cucurbita moschata (Cucurbita moschata (Rifu) v1)
Description	zinc finger protein 1-like
Location	Cmo_Chr09: 1909084 .. 1909692 (+)
RNA-Seq Expression	CmoCh09G004270
Synteny	CmoCh09G004270

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDSpolypeptide

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGGAACCCCTCACCGACCGGAACCCACTTTCCGGCGACGGCGAGGAAGACGACGAGAGGGAGCCTGCGGAGCTTTCCGACGACCGGAGCAGCCTTCTGGATCTTCAACTCTCATCCAACTCCTCCGACGCCACAACAAAGCCCAGAGTTTTCTCATGCAATTATTGCCAAAGAAAATTCTTCAGCTCCCAAGCTTTGGGCGGCCATCAAAATGCCCATAAACGGGAGAGGACTTTGGCCAAGCGGGTTCAGAGATTCGATTGGGGGGCGGCGATTCCACTCCACGGCGGCGCGTTTGATCGACGGTCCTTGGGAATTCACGCCCACTCTCAGCAAATTCAGAAGCCTGTTGGGTTTTTTAGTGGACCTGGGCCTACTTCTCAGCTGTGGCCGAGGCCTTTGTTTATGGGTCAACAGCCGGCGGTGGGGCGCCTGACGCCGGAGTTGGGCGGCCGGAATTTTGGAAGATTTGATGATGTGGCTGGGTGGCCGGCGATTGGAAGCTCAAACGCCGGTAACGAGCGGAGTAATAATGTTAGTATTGTTCATTCTCAGACCAAACAGGATCAGGATCAGACCAATTTCCTTGACTTGTCTCTCAAGCTCTAA

mRNA sequence

ATGGAACCCCTCACCGACCGGAACCCACTTTCCGGCGACGGCGAGGAAGACGACGAGAGGGAGCCTGCGGAGCTTTCCGACGACCGGAGCAGCCTTCTGGATCTTCAACTCTCATCCAACTCCTCCGACGCCACAACAAAGCCCAGAGTTTTCTCATGCAATTATTGCCAAAGAAAATTCTTCAGCTCCCAAGCTTTGGGCGGCCATCAAAATGCCCATAAACGGGAGAGGACTTTGGCCAAGCGGGTTCAGAGATTCGATTGGGGGGCGGCGATTCCACTCCACGGCGGCGCGTTTGATCGACGGTCCTTGGGAATTCACGCCCACTCTCAGCAAATTCAGAAGCCTGTTGGGTTTTTTAGTGGACCTGGGCCTACTTCTCAGCTGTGGCCGAGGCCTTTGTTTATGGGTCAACAGCCGGCGGTGGGGCGCCTGACGCCGGAGTTGGGCGGCCGGAATTTTGGAAGATTTGATGATGTGGCTGGGTGGCCGGCGATTGGAAGCTCAAACGCCGGTAACGAGCGGAGTAATAATACCAAACAGGATCAGGATCAGACCAATTTCCTTGACTTGTCTCTCAAGCTCTAA

Coding sequence (CDS)

ATGGAACCCCTCACCGACCGGAACCCACTTTCCGGCGACGGCGAGGAAGACGACGAGAGGGAGCCTGCGGAGCTTTCCGACGACCGGAGCAGCCTTCTGGATCTTCAACTCTCATCCAACTCCTCCGACGCCACAACAAAGCCCAGAGTTTTCTCATGCAATTATTGCCAAAGAAAATTCTTCAGCTCCCAAGCTTTGGGCGGCCATCAAAATGCCCATAAACGGGAGAGGACTTTGGCCAAGCGGGTTCAGAGATTCGATTGGGGGGCGGCGATTCCACTCCACGGCGGCGCGTTTGATCGACGGTCCTTGGGAATTCACGCCCACTCTCAGCAAATTCAGAAGCCTGTTGGGTTTTTTAGTGGACCTGGGCCTACTTCTCAGCTGTGGCCGAGGCCTTTGTTTATGGGTCAACAGCCGGCGGTGGGGCGCCTGACGCCGGAGTTGGGCGGCCGGAATTTTGGAAGATTTGATGATGTGGCTGGGTGGCCGGCGATTGGAAGCTCAAACGCCGGTAACGAGCGGAGTAATAATACCAAACAGGATCAGGATCAGACCAATTTCCTTGACTTGTCTCTCAAGCTCTAA

Protein sequence

MEPLTDRNPLSGDGEEDDEREPAELSDDRSSLLDLQLSSNSSDATTKPRVFSCNYCQRKFFSSQALGGHQNAHKRERTLAKRVQRFDWGAAIPLHGGAFDRRSLGIHAHSQQIQKPVGFFSGPGPTSQLWPRPLFMGQQPAVGRLTPELGGRNFGRFDDVAGWPAIGSSNAGNERSNNTKQDQDQTNFLDLSLKL

Homology

[Close]

BLAST of CmoCh09G004270 vs. ExPASy Swiss-Prot
Match: Q42485 (Zinc finger protein 1 OS=Arabidopsis thaliana OX=3702 GN=ZFP1 PE=2 SV=1)

HSP 1 Score: 104.4 bits (259), Expect = 1.5e-21
Identity = 74/175 (42.29%), Postives = 93/175 (53.14%), Query Frame = 0


Query: 48  PRVFSCNYCQRKFFSSQALGGHQNAHKRERTLAKR----------------------VQR 107
           PRVFSCNYCQRKF+SSQALGGHQNAHKRERTLAKR                      V R
Sbjct: 65  PRVFSCNYCQRKFYSSQALGGHQNAHKRERTLAKRGQYYKMTLSSLPSSAFAFGHGSVSR 124

Query: 108 FDWGAAIPLHGGAFDRRSLGIHAHSQQIQKPVGFFSGPGPTSQLWPRPLFMGQQPAVGRL 167
           F   A++PLHG   +R +LGI AHS  I KP   F G   TS        + Q+P +G++
Sbjct: 125 FASMASLPLHGSVNNRSTLGIQAHS-TIHKP--SFLGRQTTSLSHVFKQSIHQKPTIGKM 184

Query: 168 TP-----ELGGRNFGRFDDVAGWPAIGSSNAGNERSNNTKQDQDQTNFLDLSLKL 196
            P     E+ G N       +   A      G+ +SN  ++D +Q   +DL+LKL
Sbjct: 185 LPEKFHLEVAGNN------NSNMVAAKLERIGHFKSN--QEDHNQFKKIDLTLKL 228

[Close]

BLAST of CmoCh09G004270 vs. ExPASy Swiss-Prot
Match: Q39262 (Zinc finger protein 3 OS=Arabidopsis thaliana OX=3702 GN=ZFP3 PE=1 SV=1)

HSP 1 Score: 95.5 bits (236), Expect = 7.0e-19
Identity = 72/184 (39.13%), Postives = 98/184 (53.26%), Query Frame = 0


Query: 13  DGEEDDEREPAELS-----DDRSSLLDLQLSSNSSDATTKPRVFSCNYCQRKFFSSQALG 72
           D E D      EL+     DD +S++      N S  +T+ ++FSCNYCQR F+SSQALG
Sbjct: 24  DEERDVHNSSHELNLIDCIDDTTSIV------NESTTSTEQKLFSCNYCQRTFYSSQALG 83

Query: 73  GHQNAHKRERTLAKRVQRFDWGAA----------IPLHGGAFDRRSLGIHAHSQQIQKPV 132
           GHQNAHKRERTLAKR QR    A+          +P HG   + RSLGI AHS  I   +
Sbjct: 84  GHQNAHKRERTLAKRGQRMAASASAFGHPYGFSPLPFHGQYNNHRSLGIQAHS--ISHKL 143

Query: 133 GFFSG-PGPTSQL-WPRPLFMGQQPAVGRLTPELGGRNFGRFDDVAGWPAIGSSNAGNER 180
             ++G  G   Q+ W R L   QQPA+G+  P +   +      +   P++ S +   + 
Sbjct: 144 SSYNGFGGHYGQINWSR-LPFDQQPAIGKF-PSMDNFHHHHHQMMMMAPSVNSRSNNIDS 197

[Close]

BLAST of CmoCh09G004270 vs. ExPASy Swiss-Prot
Match: Q39263 (Zinc finger protein 4 OS=Arabidopsis thaliana OX=3702 GN=ZFP4 PE=2 SV=2)

HSP 1 Score: 80.9 bits (198), Expect = 1.8e-14
Identity = 45/82 (54.88%), Postives = 49/82 (59.76%), Query Frame = 0


Query: 27  DDRSSLLDLQLSSNSSDA----------TTKPRVFSCNYCQRKFFSSQALGGHQNAHKRE 86
           D  SS L L LSS S  +          +   RVFSCNYCQRKF+SSQALGGHQNAHKRE
Sbjct: 51  DLESSSLTLPLSSTSESSNPEQQQQQQPSVSKRVFSCNYCQRKFYSSQALGGHQNAHKRE 110

Query: 87  RTLAKRVQRFDWGAAIPLHGGA 99
           RTLAKR  R       P  G +
Sbjct: 111 RTLAKRAMRMGLAGVFPGRGSS 132

[Close]

BLAST of CmoCh09G004270 vs. ExPASy Swiss-Prot
Match: Q39266 (Zinc finger protein 7 OS=Arabidopsis thaliana OX=3702 GN=ZFP7 PE=1 SV=1)

HSP 1 Score: 80.1 bits (196), Expect = 3.1e-14
Identity = 49/108 (45.37%), Postives = 62/108 (57.41%), Query Frame = 0


Query: 9   PLSGDGEEDDEREPAELSDDRSSLLDLQLSSNSSDAT------TKPRVFSCNYCQRKFFS 68
           P S  GE    ++ ++   +  S LDL+L+   +D T        PRVFSCNYC+RKF+S
Sbjct: 12  PASRGGEASSNQDLSKPESNHVS-LDLKLNDTFNDDTKSTKCEANPRVFSCNYCRRKFYS 71

Query: 69  SQALGGHQNAHKRERTLAKRVQRFDWGAAIPLHGGAFDRRSLGIHAHS 111
           SQALGGHQNAHKRERT+AKR                +   SLG+ AHS
Sbjct: 72  SQALGGHQNAHKRERTMAKRAMHMGRMFGHHHRPYTYTSSSLGMQAHS 118

[Close]

BLAST of CmoCh09G004270 vs. ExPASy Swiss-Prot
Match: Q39261 (Zinc finger protein 2 OS=Arabidopsis thaliana OX=3702 GN=ZFP2 PE=1 SV=1)

HSP 1 Score: 79.7 bits (195), Expect = 4.0e-14
Identity = 41/62 (66.13%), Postives = 47/62 (75.81%), Query Frame = 0


Query: 21 EPAELSDDRSSLLDLQLSSNSSDATTKPRVFSCNYCQRKFFSSQALGGHQNAHKRERTLA 80
          EP+ +S   SS      S+NSS    +PRVFSCNYCQRKF+SSQALGGHQNAHK ERTLA
Sbjct: 28 EPSSMSSSSSS------STNSSSCLEQPRVFSCNYCQRKFYSSQALGGHQNAHKLERTLA 83

Query: 81 KR 83
          K+
Sbjct: 88 KK 83

[Close]

BLAST of CmoCh09G004270 vs. ExPASy TrEMBL
Match: A0A6J1F839 (zinc finger protein 1-like OS=Cucurbita moschata OX=3662 GN=LOC111443188 PE=4 SV=1)

HSP 1 Score: 391.3 bits (1004), Expect = 2.3e-105
Identity = 195/202 (96.53%), Postives = 195/202 (96.53%), Query Frame = 0


Query: 1   MEPLTDRNPLSGDGEEDDEREPAELSDDRSSLLDLQLSSNSSDATTKPRVFSCNYCQRKF 60
           MEPLTDRNPLSGDGEEDDEREPAELSDDRSSLLDLQLSSNSSDATTKPRVFSCNYCQRKF
Sbjct: 42  MEPLTDRNPLSGDGEEDDEREPAELSDDRSSLLDLQLSSNSSDATTKPRVFSCNYCQRKF 101

Query: 61  FSSQALGGHQNAHKRERTLAKRVQRFDWGAAIPLHGGAFDRRSLGIHAHSQQIQKPVGFF 120
           FSSQALGGHQNAHKRERTLAKRVQRFDWGAAIPLHGGAFDRRSLGIHAHSQQIQKPVGFF
Sbjct: 102 FSSQALGGHQNAHKRERTLAKRVQRFDWGAAIPLHGGAFDRRSLGIHAHSQQIQKPVGFF 161

Query: 121 SGPGPTSQLWPRPLFMGQQPAVGRLTPELGGRNFGRFDDVAGWPAIGSSNAGNERSNN-- 180
           SGPGPTSQLWPRPLFMGQQPAVGRLTPELGGRNFGRFDDVAGWPAIGSSNAGNERSNN  
Sbjct: 162 SGPGPTSQLWPRPLFMGQQPAVGRLTPELGGRNFGRFDDVAGWPAIGSSNAGNERSNNVS 221

Query: 181 -----TKQDQDQTNFLDLSLKL 196
                TKQDQDQTNFLDLSLKL
Sbjct: 222 IVHSQTKQDQDQTNFLDLSLKL 243

[Close]

BLAST of CmoCh09G004270 vs. ExPASy TrEMBL
Match: A0A6J1IG94 (zinc finger protein 1-like OS=Cucurbita maxima OX=3661 GN=LOC111476654 PE=4 SV=1)

HSP 1 Score: 387.1 bits (993), Expect = 4.3e-104
Identity = 193/202 (95.54%), Postives = 194/202 (96.04%), Query Frame = 0


Query: 1   MEPLTDRNPLSGDGEEDDEREPAELSDDRSSLLDLQLSSNSSDATTKPRVFSCNYCQRKF 60
           MEPLTDRNPLSGDGEEDD+REPAELSDDRSSLLDLQLSSNSSDATTKPRVFSCNYCQRKF
Sbjct: 41  MEPLTDRNPLSGDGEEDDDREPAELSDDRSSLLDLQLSSNSSDATTKPRVFSCNYCQRKF 100

Query: 61  FSSQALGGHQNAHKRERTLAKRVQRFDWGAAIPLHGGAFDRRSLGIHAHSQQIQKPVGFF 120
           FSSQALGGHQNAHKRERTLAKRVQRFDWGAAIPLHGGAFDRRSLGIHAHSQQIQKPVGFF
Sbjct: 101 FSSQALGGHQNAHKRERTLAKRVQRFDWGAAIPLHGGAFDRRSLGIHAHSQQIQKPVGFF 160

Query: 121 SGPGPTSQLWPRPLFMGQQPAVGRLTPELGGRNFGRFDDVAGWPAIGSSNAGNERSNN-- 180
           SGPGPTSQLWPR LFMGQQPAVGRLTPELGGRNFGRFDDVAGWPAIGSSNAGNERSNN  
Sbjct: 161 SGPGPTSQLWPRTLFMGQQPAVGRLTPELGGRNFGRFDDVAGWPAIGSSNAGNERSNNVS 220

Query: 181 -----TKQDQDQTNFLDLSLKL 196
                TKQDQDQTNFLDLSLKL
Sbjct: 221 IVHSQTKQDQDQTNFLDLSLKL 242

[Close]

BLAST of CmoCh09G004270 vs. ExPASy TrEMBL
Match: A0A5A7VC97 (Zinc finger protein 1-like OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold255G003190 PE=4 SV=1)

HSP 1 Score: 300.1 bits (767), Expect = 6.9e-78
Identity = 162/213 (76.06%), Postives = 177/213 (83.10%), Query Frame = 0


Query: 1   MEPLTDRNPLSGDGEEDDEREPAELSDDRSSLLDLQLSS-NSSDATTKPRVFSCNYCQRK 60
           ME  TD NP SG+GEEDDE+   E S++RSSLL+LQLSS NSSD+T KPR+FSCNYCQRK
Sbjct: 1   MESHTDGNPFSGEGEEDDEK---EFSEERSSLLELQLSSNNSSDSTNKPRIFSCNYCQRK 60

Query: 61  FFSSQALGGHQNAHKRERTLAKRVQRFDWGAAIPLHGGAFDRR-SLGIHAHSQQIQKP-- 120
           FFSSQALGGHQNAHKRERTLAKRVQ+FDW AAIPLHGGAFDRR SLG+HAHSQQIQKP  
Sbjct: 61  FFSSQALGGHQNAHKRERTLAKRVQKFDWAAAIPLHGGAFDRRSSLGLHAHSQQIQKPPA 120

Query: 121 VG-FFSGPGPT--SQLWPRPLFMGQQPAVGRLTPELGGRNFGRFDDVAGWPAIGSSNAGN 180
           VG FF G GP+  SQLWPRP+FMGQQPAVGRL  ELGGRNFGR+DDVA W AIG+SNAGN
Sbjct: 121 VGLFFGGAGPSSGSQLWPRPMFMGQQPAVGRLMAELGGRNFGRYDDVAEWTAIGTSNAGN 180

Query: 181 ERSNN-----------TKQDQDQTNFLDLSLKL 196
           E  NN           T+QD+DQTNFLDLSLKL
Sbjct: 181 ESRNNNNNNSNIVHSQTQQDKDQTNFLDLSLKL 210

[Close]

BLAST of CmoCh09G004270 vs. ExPASy TrEMBL
Match: A0A1S3BVD7 (zinc finger protein 1-like OS=Cucumis melo OX=3656 GN=LOC103493904 PE=4 SV=1)

HSP 1 Score: 300.1 bits (767), Expect = 6.9e-78
Identity = 162/213 (76.06%), Postives = 177/213 (83.10%), Query Frame = 0


Query: 1   MEPLTDRNPLSGDGEEDDEREPAELSDDRSSLLDLQLSS-NSSDATTKPRVFSCNYCQRK 60
           ME  TD NP SG+GEEDDE+   E S++RSSLL+LQLSS NSSD+T KPR+FSCNYCQRK
Sbjct: 1   MESHTDGNPFSGEGEEDDEK---EFSEERSSLLELQLSSNNSSDSTNKPRIFSCNYCQRK 60

Query: 61  FFSSQALGGHQNAHKRERTLAKRVQRFDWGAAIPLHGGAFDRR-SLGIHAHSQQIQKP-- 120
           FFSSQALGGHQNAHKRERTLAKRVQ+FDW AAIPLHGGAFDRR SLG+HAHSQQIQKP  
Sbjct: 61  FFSSQALGGHQNAHKRERTLAKRVQKFDWAAAIPLHGGAFDRRSSLGLHAHSQQIQKPPA 120

Query: 121 VG-FFSGPGPT--SQLWPRPLFMGQQPAVGRLTPELGGRNFGRFDDVAGWPAIGSSNAGN 180
           VG FF G GP+  SQLWPRP+FMGQQPAVGRL  ELGGRNFGR+DDVA W AIG+SNAGN
Sbjct: 121 VGLFFGGAGPSSGSQLWPRPMFMGQQPAVGRLMAELGGRNFGRYDDVAEWTAIGTSNAGN 180

Query: 181 ERSNN-----------TKQDQDQTNFLDLSLKL 196
           E  NN           T+QD+DQTNFLDLSLKL
Sbjct: 181 ESRNNNNNNSNIVHSQTQQDKDQTNFLDLSLKL 210

[Close]

BLAST of CmoCh09G004270 vs. ExPASy TrEMBL
Match: A0A6J1J146 (zinc finger protein 3-like OS=Cucurbita maxima OX=3661 GN=LOC111480379 PE=4 SV=1)

HSP 1 Score: 279.6 bits (714), Expect = 9.7e-72
Identity = 146/203 (71.92%), Postives = 158/203 (77.83%), Query Frame = 0


Query: 1   MEPLTDRNPLSGDGEEDDEREPAELSDDRSSLLDLQLSSNSSDATTKPRVFSCNYCQRKF 60
           ME   D+ PL  D EED + E  ELSDDR ++LDL LS      TTKPR+FSCNYC RKF
Sbjct: 1   MELQADKTPLFEDVEEDGDEETGELSDDRRTVLDLHLS------TTKPRIFSCNYCHRKF 60

Query: 61  FSSQALGGHQNAHKRERTLAKRVQRFDW-GAAIPLHGGAFDRRSLGIHAHSQQIQKPVGF 120
           FSSQALGGHQNAHKRERTLAKRVQRF W  AAIPLHGGAF  RSLGIHAH+QQIQKP+GF
Sbjct: 61  FSSQALGGHQNAHKRERTLAKRVQRFHWVAAAIPLHGGAFHGRSLGIHAHAQQIQKPLGF 120

Query: 121 FSGPGPTSQLWPRPLFMGQQPAVGRLTPELGGRNFGRFDDVAGWPAIGSSNAGNERSNN- 180
           F GP  +  LWPRP+FMGQQPAV RLT  +GGRNFGR+DDVA WPAIG SNAGNE  N+ 
Sbjct: 121 FGGPTSSPPLWPRPVFMGQQPAVERLTTTIGGRNFGRYDDVARWPAIGGSNAGNENINHD 180

Query: 181 ------TKQDQDQTNFLDLSLKL 196
                 TKQDQ QTNFLDLSLKL
Sbjct: 181 NIVHSQTKQDQGQTNFLDLSLKL 197

[Close]

BLAST of CmoCh09G004270 vs. NCBI nr
Match: XP_022936656.1 (zinc finger protein 1-like [Cucurbita moschata])

HSP 1 Score: 391.3 bits (1004), Expect = 4.7e-105
Identity = 195/202 (96.53%), Postives = 195/202 (96.53%), Query Frame = 0


Query: 1   MEPLTDRNPLSGDGEEDDEREPAELSDDRSSLLDLQLSSNSSDATTKPRVFSCNYCQRKF 60
           MEPLTDRNPLSGDGEEDDEREPAELSDDRSSLLDLQLSSNSSDATTKPRVFSCNYCQRKF
Sbjct: 42  MEPLTDRNPLSGDGEEDDEREPAELSDDRSSLLDLQLSSNSSDATTKPRVFSCNYCQRKF 101

Query: 61  FSSQALGGHQNAHKRERTLAKRVQRFDWGAAIPLHGGAFDRRSLGIHAHSQQIQKPVGFF 120
           FSSQALGGHQNAHKRERTLAKRVQRFDWGAAIPLHGGAFDRRSLGIHAHSQQIQKPVGFF
Sbjct: 102 FSSQALGGHQNAHKRERTLAKRVQRFDWGAAIPLHGGAFDRRSLGIHAHSQQIQKPVGFF 161

Query: 121 SGPGPTSQLWPRPLFMGQQPAVGRLTPELGGRNFGRFDDVAGWPAIGSSNAGNERSNN-- 180
           SGPGPTSQLWPRPLFMGQQPAVGRLTPELGGRNFGRFDDVAGWPAIGSSNAGNERSNN  
Sbjct: 162 SGPGPTSQLWPRPLFMGQQPAVGRLTPELGGRNFGRFDDVAGWPAIGSSNAGNERSNNVS 221

Query: 181 -----TKQDQDQTNFLDLSLKL 196
                TKQDQDQTNFLDLSLKL
Sbjct: 222 IVHSQTKQDQDQTNFLDLSLKL 243

[Close]

BLAST of CmoCh09G004270 vs. NCBI nr
Match: KAG7024430.1 (Zinc finger protein 1, partial [Cucurbita argyrosperma subsp. argyrosperma])

HSP 1 Score: 388.3 bits (996), Expect = 4.0e-104
Identity = 194/202 (96.04%), Postives = 194/202 (96.04%), Query Frame = 0


Query: 1   MEPLTDRNPLSGDGEEDDEREPAELSDDRSSLLDLQLSSNSSDATTKPRVFSCNYCQRKF 60
           MEPLTDRNPLSGDGEEDDERE AELSDDRSSLLDLQLSSNSSDATTKPRVFSCNYCQRKF
Sbjct: 1   MEPLTDRNPLSGDGEEDDERETAELSDDRSSLLDLQLSSNSSDATTKPRVFSCNYCQRKF 60

Query: 61  FSSQALGGHQNAHKRERTLAKRVQRFDWGAAIPLHGGAFDRRSLGIHAHSQQIQKPVGFF 120
           FSSQALGGHQNAHKRERTLAKRVQRFDWGAAIPLHGGAFDRRSLGIHAHSQQIQKPVGFF
Sbjct: 61  FSSQALGGHQNAHKRERTLAKRVQRFDWGAAIPLHGGAFDRRSLGIHAHSQQIQKPVGFF 120

Query: 121 SGPGPTSQLWPRPLFMGQQPAVGRLTPELGGRNFGRFDDVAGWPAIGSSNAGNERSNN-- 180
           SGPGPTSQLWPRPLFMGQQPAVGRLTPELGGRNFGRFDDVAGWPAIGSSNAGNERSNN  
Sbjct: 121 SGPGPTSQLWPRPLFMGQQPAVGRLTPELGGRNFGRFDDVAGWPAIGSSNAGNERSNNVS 180

Query: 181 -----TKQDQDQTNFLDLSLKL 196
                TKQDQDQTNFLDLSLKL
Sbjct: 181 IVHSQTKQDQDQTNFLDLSLKL 202

[Close]

BLAST of CmoCh09G004270 vs. NCBI nr
Match: XP_022976191.1 (zinc finger protein 1-like [Cucurbita maxima])

HSP 1 Score: 387.1 bits (993), Expect = 8.9e-104
Identity = 193/202 (95.54%), Postives = 194/202 (96.04%), Query Frame = 0


Query: 1   MEPLTDRNPLSGDGEEDDEREPAELSDDRSSLLDLQLSSNSSDATTKPRVFSCNYCQRKF 60
           MEPLTDRNPLSGDGEEDD+REPAELSDDRSSLLDLQLSSNSSDATTKPRVFSCNYCQRKF
Sbjct: 41  MEPLTDRNPLSGDGEEDDDREPAELSDDRSSLLDLQLSSNSSDATTKPRVFSCNYCQRKF 100

Query: 61  FSSQALGGHQNAHKRERTLAKRVQRFDWGAAIPLHGGAFDRRSLGIHAHSQQIQKPVGFF 120
           FSSQALGGHQNAHKRERTLAKRVQRFDWGAAIPLHGGAFDRRSLGIHAHSQQIQKPVGFF
Sbjct: 101 FSSQALGGHQNAHKRERTLAKRVQRFDWGAAIPLHGGAFDRRSLGIHAHSQQIQKPVGFF 160

Query: 121 SGPGPTSQLWPRPLFMGQQPAVGRLTPELGGRNFGRFDDVAGWPAIGSSNAGNERSNN-- 180
           SGPGPTSQLWPR LFMGQQPAVGRLTPELGGRNFGRFDDVAGWPAIGSSNAGNERSNN  
Sbjct: 161 SGPGPTSQLWPRTLFMGQQPAVGRLTPELGGRNFGRFDDVAGWPAIGSSNAGNERSNNVS 220

Query: 181 -----TKQDQDQTNFLDLSLKL 196
                TKQDQDQTNFLDLSLKL
Sbjct: 221 IVHSQTKQDQDQTNFLDLSLKL 242

[Close]

BLAST of CmoCh09G004270 vs. NCBI nr
Match: KAG6591545.1 (Zinc finger protein 1, partial [Cucurbita argyrosperma subsp. sororia])

HSP 1 Score: 386.7 bits (992), Expect = 1.2e-103
Identity = 193/202 (95.54%), Postives = 194/202 (96.04%), Query Frame = 0


Query: 1   MEPLTDRNPLSGDGEEDDEREPAELSDDRSSLLDLQLSSNSSDATTKPRVFSCNYCQRKF 60
           MEPLTDRNPLSGDGEE+DERE AELSDDRSSLLDLQLSSNSSDATTKPRVFSCNYCQRKF
Sbjct: 1   MEPLTDRNPLSGDGEEEDERETAELSDDRSSLLDLQLSSNSSDATTKPRVFSCNYCQRKF 60

Query: 61  FSSQALGGHQNAHKRERTLAKRVQRFDWGAAIPLHGGAFDRRSLGIHAHSQQIQKPVGFF 120
           FSSQALGGHQNAHKRERTLAKRVQRFDWGAAIPLHGGAFDRRSLGIHAHSQQIQKPVGFF
Sbjct: 61  FSSQALGGHQNAHKRERTLAKRVQRFDWGAAIPLHGGAFDRRSLGIHAHSQQIQKPVGFF 120

Query: 121 SGPGPTSQLWPRPLFMGQQPAVGRLTPELGGRNFGRFDDVAGWPAIGSSNAGNERSNN-- 180
           SGPGPTSQLWPRPLFMGQQPAVGRLTPELGGRNFGRFDDVAGWPAIGSSNAGNERSNN  
Sbjct: 121 SGPGPTSQLWPRPLFMGQQPAVGRLTPELGGRNFGRFDDVAGWPAIGSSNAGNERSNNVS 180

Query: 181 -----TKQDQDQTNFLDLSLKL 196
                TKQDQDQTNFLDLSLKL
Sbjct: 181 IVHSQTKQDQDQTNFLDLSLKL 202

[Close]

BLAST of CmoCh09G004270 vs. NCBI nr
Match: XP_023536424.1 (zinc finger protein 1-like [Cucurbita pepo subsp. pepo])

HSP 1 Score: 384.8 bits (987), Expect = 4.4e-103
Identity = 191/202 (94.55%), Postives = 192/202 (95.05%), Query Frame = 0


Query: 1   MEPLTDRNPLSGDGEEDDEREPAELSDDRSSLLDLQLSSNSSDATTKPRVFSCNYCQRKF 60
           MEPLTDRNPLSGDGEEDDEREPAELSDDRS+LLDLQLSSNSSDATTKPRVFSCNYCQRKF
Sbjct: 1   MEPLTDRNPLSGDGEEDDEREPAELSDDRSTLLDLQLSSNSSDATTKPRVFSCNYCQRKF 60

Query: 61  FSSQALGGHQNAHKRERTLAKRVQRFDWGAAIPLHGGAFDRRSLGIHAHSQQIQKPVGFF 120
           FSSQALGGHQNAHKRERTLAKRVQRFDWGAAIPLHGGAFDRRSLGIHAHSQQIQKPVGFF
Sbjct: 61  FSSQALGGHQNAHKRERTLAKRVQRFDWGAAIPLHGGAFDRRSLGIHAHSQQIQKPVGFF 120

Query: 121 SGPGPTSQLWPRPLFMGQQPAVGRLTPELGGRNFGRFDDVAGWPAIGSSNAGNERSNN-- 180
           SGPGPTSQLWPRPLFMGQQPAVGRLTPE GGRNFGRFDDV GWPAIGSSNAGNERSNN  
Sbjct: 121 SGPGPTSQLWPRPLFMGQQPAVGRLTPEFGGRNFGRFDDVTGWPAIGSSNAGNERSNNVS 180

Query: 181 -----TKQDQDQTNFLDLSLKL 196
                TK DQDQTNFLDLSLKL
Sbjct: 181 IVHSQTKPDQDQTNFLDLSLKL 202

[Close]

BLAST of CmoCh09G004270 vs. TAIR 10
Match: AT1G80730.1 (zinc-finger protein 1 )

HSP 1 Score: 104.4 bits (259), Expect = 1.1e-22
Identity = 74/175 (42.29%), Postives = 93/175 (53.14%), Query Frame = 0


Query: 48  PRVFSCNYCQRKFFSSQALGGHQNAHKRERTLAKR----------------------VQR 107
           PRVFSCNYCQRKF+SSQALGGHQNAHKRERTLAKR                      V R
Sbjct: 65  PRVFSCNYCQRKFYSSQALGGHQNAHKRERTLAKRGQYYKMTLSSLPSSAFAFGHGSVSR 124

Query: 108 FDWGAAIPLHGGAFDRRSLGIHAHSQQIQKPVGFFSGPGPTSQLWPRPLFMGQQPAVGRL 167
           F   A++PLHG   +R +LGI AHS  I KP   F G   TS        + Q+P +G++
Sbjct: 125 FASMASLPLHGSVNNRSTLGIQAHS-TIHKP--SFLGRQTTSLSHVFKQSIHQKPTIGKM 184

Query: 168 TP-----ELGGRNFGRFDDVAGWPAIGSSNAGNERSNNTKQDQDQTNFLDLSLKL 196
            P     E+ G N       +   A      G+ +SN  ++D +Q   +DL+LKL
Sbjct: 185 LPEKFHLEVAGNN------NSNMVAAKLERIGHFKSN--QEDHNQFKKIDLTLKL 228

[Close]

BLAST of CmoCh09G004270 vs. TAIR 10
Match: AT5G10970.1 (C2H2 and C2HC zinc fingers superfamily protein )

HSP 1 Score: 98.2 bits (243), Expect = 7.7e-21
Identity = 75/186 (40.32%), Postives = 96/186 (51.61%), Query Frame = 0


Query: 39  SNSSDATTKPRVFSCNYCQRKFFSSQALGGHQNAHKRERTLAKRVQRFDWGAA------- 98
           S +   +T+ ++FSCNYCQR F+SSQALGGHQNAHKRERTLAKR QR    AA       
Sbjct: 92  SFNGSTSTEQKLFSCNYCQRTFYSSQALGGHQNAHKRERTLAKRGQRMASAAAFGHPYGF 151

Query: 99  --IPLHGGAFDRRSLGIHAHSQQIQKPVGFFSGPGPTSQL-WPRPLFMGQQPAVGRLT-- 158
             +P H G +  R+LGI AHS    KP  +    G   Q+ W R + + QQPA+ +LT  
Sbjct: 152 APVPFH-GQYSNRTLGIQAHSMS-HKPSSYNVYGGEYGQINWSR-IPLVQQPAIAKLTST 211

Query: 159 ------------PELGG--RNFGRFD---DVAGWPAIGSSNAGNERSNNTKQDQDQTNFL 196
                       P L     N GRFD       +P       G E     ++++ +   L
Sbjct: 212 ENHYNHHQMMIAPPLTSTCENIGRFDVGRIPVEFPTSELWQRGEELLKPAEEEKQKN--L 271

[Close]

BLAST of CmoCh09G004270 vs. TAIR 10
Match: AT5G25160.1 (zinc finger protein 3 )

HSP 1 Score: 95.5 bits (236), Expect = 5.0e-20
Identity = 72/184 (39.13%), Postives = 98/184 (53.26%), Query Frame = 0


Query: 13  DGEEDDEREPAELS-----DDRSSLLDLQLSSNSSDATTKPRVFSCNYCQRKFFSSQALG 72
           D E D      EL+     DD +S++      N S  +T+ ++FSCNYCQR F+SSQALG
Sbjct: 24  DEERDVHNSSHELNLIDCIDDTTSIV------NESTTSTEQKLFSCNYCQRTFYSSQALG 83

Query: 73  GHQNAHKRERTLAKRVQRFDWGAA----------IPLHGGAFDRRSLGIHAHSQQIQKPV 132
           GHQNAHKRERTLAKR QR    A+          +P HG   + RSLGI AHS  I   +
Sbjct: 84  GHQNAHKRERTLAKRGQRMAASASAFGHPYGFSPLPFHGQYNNHRSLGIQAHS--ISHKL 143

Query: 133 GFFSG-PGPTSQL-WPRPLFMGQQPAVGRLTPELGGRNFGRFDDVAGWPAIGSSNAGNER 180
             ++G  G   Q+ W R L   QQPA+G+  P +   +      +   P++ S +   + 
Sbjct: 144 SSYNGFGGHYGQINWSR-LPFDQQPAIGKF-PSMDNFHHHHHQMMMMAPSVNSRSNNIDS 197

[Close]

BLAST of CmoCh09G004270 vs. TAIR 10
Match: AT1G66140.1 (zinc finger protein 4 )

HSP 1 Score: 80.9 bits (198), Expect = 1.3e-15
Identity = 45/82 (54.88%), Postives = 49/82 (59.76%), Query Frame = 0


Query: 27  DDRSSLLDLQLSSNSSDA----------TTKPRVFSCNYCQRKFFSSQALGGHQNAHKRE 86
           D  SS L L LSS S  +          +   RVFSCNYCQRKF+SSQALGGHQNAHKRE
Sbjct: 51  DLESSSLTLPLSSTSESSNPEQQQQQQPSVSKRVFSCNYCQRKFYSSQALGGHQNAHKRE 110

Query: 87  RTLAKRVQRFDWGAAIPLHGGA 99
           RTLAKR  R       P  G +
Sbjct: 111 RTLAKRAMRMGLAGVFPGRGSS 132

[Close]

BLAST of CmoCh09G004270 vs. TAIR 10
Match: AT1G24625.1 (zinc finger protein 7 )

HSP 1 Score: 80.1 bits (196), Expect = 2.2e-15
Identity = 49/108 (45.37%), Postives = 62/108 (57.41%), Query Frame = 0


Query: 9   PLSGDGEEDDEREPAELSDDRSSLLDLQLSSNSSDAT------TKPRVFSCNYCQRKFFS 68
           P S  GE    ++ ++   +  S LDL+L+   +D T        PRVFSCNYC+RKF+S
Sbjct: 12  PASRGGEASSNQDLSKPESNHVS-LDLKLNDTFNDDTKSTKCEANPRVFSCNYCRRKFYS 71

Query: 69  SQALGGHQNAHKRERTLAKRVQRFDWGAAIPLHGGAFDRRSLGIHAHS 111
           SQALGGHQNAHKRERT+AKR                +   SLG+ AHS
Sbjct: 72  SQALGGHQNAHKRERTMAKRAMHMGRMFGHHHRPYTYTSSSLGMQAHS 118

The following BLAST results are available for this feature:

BLAST of CmoCh09G004270 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
Q42485	1.5e-21	42.29	Zinc finger protein 1 OS=Arabidopsis thaliana OX=3702 GN=ZFP1 PE=2 SV=1	[more]
Q39262	7.0e-19	39.13	Zinc finger protein 3 OS=Arabidopsis thaliana OX=3702 GN=ZFP3 PE=1 SV=1	[more]
Q39263	1.8e-14	54.88	Zinc finger protein 4 OS=Arabidopsis thaliana OX=3702 GN=ZFP4 PE=2 SV=2	[more]
Q39266	3.1e-14	45.37	Zinc finger protein 7 OS=Arabidopsis thaliana OX=3702 GN=ZFP7 PE=1 SV=1	[more]
Q39261	4.0e-14	66.13	Zinc finger protein 2 OS=Arabidopsis thaliana OX=3702 GN=ZFP2 PE=1 SV=1	[more]

BLAST of CmoCh09G004270 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A6J1F839	2.3e-105	96.53	zinc finger protein 1-like OS=Cucurbita moschata OX=3662 GN=LOC111443188 PE=4 SV...	[more]
A0A6J1IG94	4.3e-104	95.54	zinc finger protein 1-like OS=Cucurbita maxima OX=3661 GN=LOC111476654 PE=4 SV=1	[more]
A0A5A7VC97	6.9e-78	76.06	Zinc finger protein 1-like OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaff...	[more]
A0A1S3BVD7	6.9e-78	76.06	zinc finger protein 1-like OS=Cucumis melo OX=3656 GN=LOC103493904 PE=4 SV=1	[more]
A0A6J1J146	9.7e-72	71.92	zinc finger protein 3-like OS=Cucurbita maxima OX=3661 GN=LOC111480379 PE=4 SV=1	[more]

BLAST of CmoCh09G004270 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_022936656.1	4.7e-105	96.53	zinc finger protein 1-like [Cucurbita moschata]	[more]
KAG7024430.1	4.0e-104	96.04	Zinc finger protein 1, partial [Cucurbita argyrosperma subsp. argyrosperma]	[more]
XP_022976191.1	8.9e-104	95.54	zinc finger protein 1-like [Cucurbita maxima]	[more]
KAG6591545.1	1.2e-103	95.54	Zinc finger protein 1, partial [Cucurbita argyrosperma subsp. sororia]	[more]
XP_023536424.1	4.4e-103	94.55	zinc finger protein 1-like [Cucurbita pepo subsp. pepo]	[more]

BLAST of CmoCh09G004270 vs. TAIR 10


Match Name	E-value	Identity	Description
AT1G80730.1	1.1e-22	42.29	zinc-finger protein 1	[more]
AT5G10970.1	7.7e-21	40.32	C2H2 and C2HC zinc fingers superfamily protein	[more]
AT5G25160.1	5.0e-20	39.13	zinc finger protein 3	[more]
AT1G66140.1	1.3e-15	54.88	zinc finger protein 4	[more]
AT1G24625.1	2.2e-15	45.37	zinc finger protein 7	[more]

InterPro

Analysis Name: InterPro Annotations of Cucurbita moschata (Rifu) v1
Date Performed: 2021-10-25


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	GENE3D	3.30.160.60	Classic Zinc Finger	coord: 27..87 e-value: 6.1E-7 score: 31.2
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 31..46
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 169..186
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 1..46
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 165..186
None	No IPR available	PANTHER	PTHR47287:SF11	TRANSCRIPTION FACTOR C2H2 FAMILY-RELATED	coord: 90..195
None	No IPR available	PANTHER	PTHR47287:SF11	TRANSCRIPTION FACTOR C2H2 FAMILY-RELATED	coord: 33..86
IPR044246	Zinc finger protein 3-like	PANTHER	PTHR47287	C2H2 AND C2HC ZINC FINGERS SUPERFAMILY PROTEIN	coord: 90..195
IPR044246	Zinc finger protein 3-like	PANTHER	PTHR47287	C2H2 AND C2HC ZINC FINGERS SUPERFAMILY PROTEIN	coord: 33..86
IPR013087	Zinc finger C2H2-type	PROSITE	PS00028	ZINC_FINGER_C2H2_1	coord: 53..73
IPR013087	Zinc finger C2H2-type	PROSITE	PS50157	ZINC_FINGER_C2H2_2	coord: 51..78 score: 11.343733
IPR036236	Zinc finger C2H2 superfamily	SUPERFAMILY	57667	beta-beta-alpha zinc fingers	coord: 47..78

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
CmoCh09G004270.1	CmoCh09G004270.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0009788	negative regulation of abscisic acid-activated signaling pathway
cellular_component	GO:0016021	integral component of membrane