CmoCh09G003970 (gene) Cucurbita moschata (Rifu) v1

Overview


Name	CmoCh09G003970
Type	gene
Organism	Cucurbita moschata (Cucurbita moschata (Rifu) v1)
Description	DnaJ/Hsp40 cysteine-rich domain superfamily protein
Location	Cmo_Chr09: 1748787 .. 1752641 (-)
RNA-Seq Expression	CmoCh09G003970
Synteny	CmoCh09G003970

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonfive_prime_UTRpolypeptideCDS

Hold the cursor over a type above to highlight its positions in the sequence below.

CAAAAACGAATTTTCTTTCGTCGAAAATGAGGCGGGCCCGAAAGAAACCCTCCAAGATATCTTCCACTTTCTCGGCTCCGTGTATTTCTTTGAATACCAGAAAACTTCTCTGGCGGTTCGTGTTTCGAACGAAATCGCACAGGAAGAATCCGATTGCTTTGGAACGTGATTGAGAAGAGAAGTAAAGGAGAGAAATGAGTAGTTCTGTGTGTTTCAGGCCTGTGATTATTGCGAAATCGATTGACGGCAGAGGATTTTCTTCTACGAGAATCATACTAATCGGCTCAGAGTTTGCTGCGAATCGTGTTTCGTTCACCGATTCGAGGCTACTGAGCTCTAGGATTTGTGGCGCGCGAGCTTCTATGGTGGATTCTTATGGAAGCTCGGATTTCGTCAAGAGGATGGAACAAGCATGGGAGATCTCTCAGGTACTCGCGATCTTCTACACTCCTCGTAATTTCCTTTCATTTCGTAACTGTTTCATTTACCTATCTCTCTTTCTGTCCTTGAGCGACGGTAGAATGAGTAGATGATTTCTTCCTGTTTCTTAGGCCGTGTTTCTTTCCAACGAGATTGCGATATTCATTTTCTTTAACATTCTGCTAGCATTTATGGCGATGTTTATGAACCTAATCTCGGAAATTAATCCTGATAATTCAACGAGTCTGTTTGCTTACATTCCTTCCCTGTCTGACGCGGTCAGGAGGAGGAATAGGAACCGCAAATTTCCTAATCCTAATCCGCTGAACCTAGCTTAGTCTGTAAAGATTTCTGGCAACATTTGCTAGTCTAATCGAAGAAACCAGTCCTCATAGCATAACGCGTTGCCTGTCCGCTTATGTTCTTTTCTGCTGTAATGCGATCAGGCTTAGGAGCCGGTGATTTCCTTATCCTCTGGTTCTTCGGTTGTGCTATGTCAGCTTAGAATTAACATTTGTCTTCACGAACATAGTGGTAGAATATTCAAATCCTTTAGATCTCTGCTTTCCACAAGCCTATTCATAGCTTATATATGTTACCTGTTCATCATGTTATTGTAATATGATTTACAATGTTCGAAAGAAAAATTATCCAGTGTGTTTCTATTCGAACTCGAGATGATTCGACATCATGAAGAGCCTAACAGTCCTAATTATATGTTGACAGCAACCAACGCCTATTTGCTGCTCTTCTTGCCACTCAAATGGACATGTGGAGTGCCAATGGTGTAAGGGAACGGGCTTCTTTATTCTCGGAGATAATATGCTTTGTCAAGTTCCTTCCAGAAACACTAGCTGTGTTATTTGCGCCGGCAAGGTATATTCATGAAACTGACTTGATCTCTCTCTCTTTTATTCTCTTTTTTCTTTTCATCCTAGAACAGTGAATTGCAGTACTCGTATTTTTTTTGGATATGTTTGGAACCAGTTTCACGGTGGCTTTTCTGGTGCTAGGAAGTGTTTTTATCCAAATATATCAGATAAATACTTAATAAAACGTGTTTAATGATAAAACAATTTGTTGAGTTTTTATCTAACGGAAAGTATTTTTTAATTATTATATATATTTACTAAGTTACTATGATTTCGTGCATGGAAACATTAGTGAGATGGATATATAGAAGCATGAGCTAGCGTTAGAAACTGTGGTTAGCAAGTATTTAGGAATAGTATGCGTTGTGTTGGATGAAACTAACGATAGAGGCTTTCAAGTCAAAATTATGAAAAGCACCTTCAAGTGCTTTTTTTTTTTTTTTTTTTTTTTTTTTNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNTTTTTTTTTTTTTTTTTTTTTTTTTTATAAGCGTTTTTTAGCCTGTATTCAAATATAAACATTTCAGGTAGGTCAAAGTGTTTTTAACCACGAAAATCAACTTTTTTAATCGTCAAAAGCACTCTTAGTTAAGTAATGGTATAAAGCTCTTTCGAATACTTTGGGGCTTCTATATTTTCTGAAGTACATTTAAAGATGGAATTAGTTTGTGCTTCTTCTATTTTTGACCCAAATGTCTGCTACCTAAATTTTCACTGCACACTTTCCTTCTGCATCTCTACTTCTTTTTGCAACTCGACATATACATTTTCCCGCATTCTCCCCTATTCTGTGTATACTTTCTATTATTAACTTCCTAAACACTCACTTCTTTTTTGAACTGAGGAATGTGTTTGTTGTACCCAAGCACTTTTTCTTTAAATATTTTTAATAAAATCATTTTCATATTTTACCCTCAAATATTTTTTCTTTTTTCTTTAAATACTTTTAATAAAAATGTTTTCATATGATACCTATTGCAAATATGTTTTCTTTTTCTCACTATTATTTTTGGATATTTTAGTTAATCGCTTTAAATTCATTTTTGGTTAACCTATCTCTCATGTATATGGATCAGAAATAGATTTTAAATGAGTCCTTTTTCTTTGAATTATTATTTTTTCTTTCCTTCAAATTTGACCATACAAGTGTAGTGGTGTTTTCCTTTTTTTTTTCTCTGTATTTTTTTTTTCTAGTTGACCACTTTGAATTAATTTTTCGATAATCTATCTTGCACGTATTTTATTTAAAGATAGTTTTTTTTTTAGGTAATCCAATTTCTTTAAAGTTCTTTTTGTTCTTTGACATTTTTTTAAGGTAATCCAATTTCTTTAAAGTTCTTTTTGTTCTTTGACATTTTTTTAAGGTAATACTTCAGATCATCTAGACACAATTTTAATTTTTTTTTTTCATATAGTTCTTTGAAAAAACCAATTTCATTCAAAAAGCATGTCTTTCGTAAAGGTATTTCAGATGCACTATATTGTGTTTTTAAAAAAGATTACTTGTAATTAGTTGTTAAATACTTTCATTTGTTGCCTTCAGTTAACAACAAAAGAAAACTACAAGAATTTTTGTTTGAAACTAACTATTAGATAATCCAGAGAATTACTTGGCCTTTATTTCTCCATAATTTATGAACTGCCAGATTGAGTAGTTTAATTAGCATGGTTAACGTGCCATTATTTTTCAGGGCTCTATCCGATGCTCCGACTGTAAGGGAACAGGTTACCGGGCCAAGTGGCTGGGTGAGCCCCCCGTTTCTAAATAGACCGAAACTTCAGCAAAAAAGAAAAATGCCAGAGCCTGATCTGGTGCTACCAGGTCTAATCAAGTCAACTATAATTTGTCATTATTATTTTTATTAAATCTCATAACCAACGTCTAGTGCAGTTTTCATTAAAATCGAGCAGTCAGCTTGCGAATGGATTGCTGGCTTTTTGCTGCTTTAAGATTCGTTGTATATTGTTTCAGAATCGGTCAAATTCATGTTGTTCATTGAATATCATATTGAAGTTACATTTGGCTCACAAGGTGTGCTAAGCATGCCATTTAACCTCTCGACATCTTTAGCGTCGGCAAGTGAATTGTGTGCACAGATTCTCCTTCATGGGCTCAGTAAACGATGTCATGAAAATACCTGCATGAGCCAACAGAAAATTTAA

mRNA sequence

CAAAAACGAATTTTCTTTCGTCGAAAATGAGGCGGGCCCGAAAGAAACCCTCCAAGATATCTTCCACTTTCTCGGCTCCGTGTATTTCTTTGAATACCAGAAAACTTCTCTGGCGGTTCGTGTTTCGAACGAAATCGCACAGGAAGAATCCGATTGCTTTGGAACGTGATTGAGAAGAGAAGTAAAGGAGAGAAATGAGTAGTTCTGTGTGTTTCAGGCCTGTGATTATTGCGAAATCGATTGACGGCAGAGGATTTTCTTCTACGAGAATCATACTAATCGGCTCAGAGTTTGCTGCGAATCGTGTTTCGTTCACCGATTCGAGGCTACTGAGCTCTAGGATTTGTGGCGCGCGAGCTTCTATGGTGGATTCTTATGGAAGCTCGGATTTCGTCAAGAGGATGGAACAAGCATGGGAGATCTCTCAGCAACCAACGCCTATTTGCTGCTCTTCTTGCCACTCAAATGGACATGTGGAGTGCCAATGGTGTAAGGGAACGGGCTTCTTTATTCTCGGAGATAATATGCTTTGTCAAGTTCCTTCCAGAAACACTAGCTGTGTTATTTGCGCCGGCAAGGGCTCTATCCGATGCTCCGACTGTAAGGGAACAGGTTACCGGGCCAAGTGGCTGGATTCGTTGTATATTGTTTCAGAATCGGTCAAATTCATGTTGTTCATTGAATATCATATTGAAGTTACATTTGGCTCACAAGGTGTGCTAAGCATGCCATTTAACCTCTCGACATCTTTAGCGTCGGCAAGTGAATTGTGTGCACAGATTCTCCTTCATGGGCTCAGTAAACGATGTCATGAAAATACCTGCATGAGCCAACAGAAAATTTAA

Coding sequence (CDS)

ATGAGTAGTTCTGTGTGTTTCAGGCCTGTGATTATTGCGAAATCGATTGACGGCAGAGGATTTTCTTCTACGAGAATCATACTAATCGGCTCAGAGTTTGCTGCGAATCGTGTTTCGTTCACCGATTCGAGGCTACTGAGCTCTAGGATTTGTGGCGCGCGAGCTTCTATGGTGGATTCTTATGGAAGCTCGGATTTCGTCAAGAGGATGGAACAAGCATGGGAGATCTCTCAGCAACCAACGCCTATTTGCTGCTCTTCTTGCCACTCAAATGGACATGTGGAGTGCCAATGGTGTAAGGGAACGGGCTTCTTTATTCTCGGAGATAATATGCTTTGTCAAGTTCCTTCCAGAAACACTAGCTGTGTTATTTGCGCCGGCAAGGGCTCTATCCGATGCTCCGACTGTAAGGGAACAGGTTACCGGGCCAAGTGGCTGGATTCGTTGTATATTGTTTCAGAATCGGTCAAATTCATGTTGTTCATTGAATATCATATTGAAGTTACATTTGGCTCACAAGGTGTGCTAAGCATGCCATTTAACCTCTCGACATCTTTAGCGTCGGCAAGTGAATTGTGTGCACAGATTCTCCTTCATGGGCTCAGTAAACGATGTCATGAAAATACCTGCATGAGCCAACAGAAAATTTAA

Protein sequence

MSSSVCFRPVIIAKSIDGRGFSSTRIILIGSEFAANRVSFTDSRLLSSRICGARASMVDSYGSSDFVKRMEQAWEISQQPTPICCSSCHSNGHVECQWCKGTGFFILGDNMLCQVPSRNTSCVICAGKGSIRCSDCKGTGYRAKWLDSLYIVSESVKFMLFIEYHIEVTFGSQGVLSMPFNLSTSLASASELCAQILLHGLSKRCHENTCMSQQKI

Homology

[Close]

BLAST of CmoCh09G003970 vs. ExPASy TrEMBL
Match: A0A6J1F6R2 (uncharacterized protein LOC111442664 OS=Cucurbita moschata OX=3662 GN=LOC111442664 PE=4 SV=1)

HSP 1 Score: 307.4 bits (786), Expect = 4.8e-80
Identity = 146/146 (100.00%), Postives = 146/146 (100.00%), Query Frame = 0


Query: 1   MSSSVCFRPVIIAKSIDGRGFSSTRIILIGSEFAANRVSFTDSRLLSSRICGARASMVDS 60
           MSSSVCFRPVIIAKSIDGRGFSSTRIILIGSEFAANRVSFTDSRLLSSRICGARASMVDS
Sbjct: 1   MSSSVCFRPVIIAKSIDGRGFSSTRIILIGSEFAANRVSFTDSRLLSSRICGARASMVDS 60

Query: 61  YGSSDFVKRMEQAWEISQQPTPICCSSCHSNGHVECQWCKGTGFFILGDNMLCQVPSRNT 120
           YGSSDFVKRMEQAWEISQQPTPICCSSCHSNGHVECQWCKGTGFFILGDNMLCQVPSRNT
Sbjct: 61  YGSSDFVKRMEQAWEISQQPTPICCSSCHSNGHVECQWCKGTGFFILGDNMLCQVPSRNT 120

Query: 121 SCVICAGKGSIRCSDCKGTGYRAKWL 147
           SCVICAGKGSIRCSDCKGTGYRAKWL
Sbjct: 121 SCVICAGKGSIRCSDCKGTGYRAKWL 146

[Close]

BLAST of CmoCh09G003970 vs. ExPASy TrEMBL
Match: A0A6J1IHL0 (uncharacterized protein LOC111477293 OS=Cucurbita maxima OX=3661 GN=LOC111477293 PE=4 SV=1)

HSP 1 Score: 304.3 bits (778), Expect = 4.1e-79
Identity = 143/146 (97.95%), Postives = 146/146 (100.00%), Query Frame = 0


Query: 1   MSSSVCFRPVIIAKSIDGRGFSSTRIILIGSEFAANRVSFTDSRLLSSRICGARASMVDS 60
           M+SSVCFRPVI+AKSIDGRGFSSTRIILIGSEFAANRVSFTDSRLLSSRICGARAS+VDS
Sbjct: 1   MTSSVCFRPVILAKSIDGRGFSSTRIILIGSEFAANRVSFTDSRLLSSRICGARASLVDS 60

Query: 61  YGSSDFVKRMEQAWEISQQPTPICCSSCHSNGHVECQWCKGTGFFILGDNMLCQVPSRNT 120
           YGSSDFVKRMEQAWEISQQPTPICCSSCHSNGHVECQWCKGTGFFILGDNMLCQVPSRNT
Sbjct: 61  YGSSDFVKRMEQAWEISQQPTPICCSSCHSNGHVECQWCKGTGFFILGDNMLCQVPSRNT 120

Query: 121 SCVICAGKGSIRCSDCKGTGYRAKWL 147
           SCVICAGKGSIRCSDCKGTGYRAKWL
Sbjct: 121 SCVICAGKGSIRCSDCKGTGYRAKWL 146

[Close]

BLAST of CmoCh09G003970 vs. ExPASy TrEMBL
Match: A0A1S3BVK1 (chaperone protein DnaJ OS=Cucumis melo OX=3656 GN=LOC103493730 PE=4 SV=1)

HSP 1 Score: 261.2 bits (666), Expect = 4.0e-66
Identity = 123/146 (84.25%), Postives = 131/146 (89.73%), Query Frame = 0


Query: 1   MSSSVCFRPVIIAKSIDGRGFSSTRIILIGSEFAANRVSFTDSRLLSSRICGARASMVDS 60
           MSSSVC + VI+AKSIDG+GF STR + I S FAA RVS  DSRL  SRICG RASMVDS
Sbjct: 1   MSSSVCCKSVIMAKSIDGKGFPSTRTVSICSRFAAIRVSLIDSRLFKSRICGVRASMVDS 60

Query: 61  YGSSDFVKRMEQAWEISQQPTPICCSSCHSNGHVECQWCKGTGFFILGDNMLCQVPSRNT 120
           YGSSDFVKRMEQAWEISQQP PICCSSC+SNGHVEC+WC+GTGFFILGDNMLCQVPSRNT
Sbjct: 61  YGSSDFVKRMEQAWEISQQPRPICCSSCNSNGHVECKWCRGTGFFILGDNMLCQVPSRNT 120

Query: 121 SCVICAGKGSIRCSDCKGTGYRAKWL 147
           SCVICAGKGS+ CSDCKGTGYRAKWL
Sbjct: 121 SCVICAGKGSMCCSDCKGTGYRAKWL 146

[Close]

BLAST of CmoCh09G003970 vs. ExPASy TrEMBL
Match: A0A0A0L478 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_4G651790 PE=4 SV=1)

HSP 1 Score: 259.6 bits (662), Expect = 1.1e-65
Identity = 122/146 (83.56%), Postives = 130/146 (89.04%), Query Frame = 0


Query: 1   MSSSVCFRPVIIAKSIDGRGFSSTRIILIGSEFAANRVSFTDSRLLSSRICGARASMVDS 60
           MSSSVC + VI+AKSID +GF+ TR + I S FAANRVS  DSRL  SRICG RASMVDS
Sbjct: 1   MSSSVCCKSVIMAKSIDSKGFACTRTVSICSRFAANRVSLIDSRLFKSRICGVRASMVDS 60

Query: 61  YGSSDFVKRMEQAWEISQQPTPICCSSCHSNGHVECQWCKGTGFFILGDNMLCQVPSRNT 120
           YGSSDFVKRMEQAWEISQQP PICCSSC+SNGHVEC+WC+GTGFFILGDNMLCQVPSRNT
Sbjct: 61  YGSSDFVKRMEQAWEISQQPRPICCSSCNSNGHVECKWCRGTGFFILGDNMLCQVPSRNT 120

Query: 121 SCVICAGKGSIRCSDCKGTGYRAKWL 147
           SCVICAGKGS  CSDCKGTGYRAKWL
Sbjct: 121 SCVICAGKGSRCCSDCKGTGYRAKWL 146

[Close]

BLAST of CmoCh09G003970 vs. ExPASy TrEMBL
Match: A0A6J1CHM4 (uncharacterized protein LOC111011719 OS=Momordica charantia OX=3673 GN=LOC111011719 PE=4 SV=1)

HSP 1 Score: 253.8 bits (647), Expect = 6.3e-64
Identity = 119/146 (81.51%), Postives = 128/146 (87.67%), Query Frame = 0


Query: 1   MSSSVCFRPVIIAKSIDGRGFSSTRIILIGSEFAANRVSFTDSRLLSSRICGARASMVDS 60
           M+S VC RPV  AK IDGRGF STRI+ IG+ FAA  +SF DS++LS RICG RASMVDS
Sbjct: 1   MASCVCCRPVNTAKPIDGRGFVSTRIVPIGAGFAAPHLSFNDSKILSPRICGVRASMVDS 60

Query: 61  YGSSDFVKRMEQAWEISQQPTPICCSSCHSNGHVECQWCKGTGFFILGDNMLCQVPSRNT 120
           +GSSDF KRMEQAWEISQQP PI CSSCHSNGHVEC+WC GTGFFILGDNMLCQVPSRNT
Sbjct: 61  HGSSDFAKRMEQAWEISQQPRPIGCSSCHSNGHVECKWCAGTGFFILGDNMLCQVPSRNT 120

Query: 121 SCVICAGKGSIRCSDCKGTGYRAKWL 147
           SCVICAGKGS+ CSDCKGTGYRAKWL
Sbjct: 121 SCVICAGKGSMGCSDCKGTGYRAKWL 146

[Close]

BLAST of CmoCh09G003970 vs. NCBI nr
Match: KAG6591516.1 (hypothetical protein SDJN03_13862, partial [Cucurbita argyrosperma subsp. sororia])

HSP 1 Score: 421.8 bits (1083), Expect = 3.6e-114
Identity = 209/216 (96.76%), Postives = 209/216 (96.76%), Query Frame = 0


Query: 1   MSSSVCFRPVIIAKSIDGRGFSSTRIILIGSEFAANRVSFTDSRLLSSRICGARASMVDS 60
           MSSSVCFRPVIIAKSIDGRGFSSTRIILIGSEFAANRVSFTDSRLLSSRICGARASMVDS
Sbjct: 1   MSSSVCFRPVIIAKSIDGRGFSSTRIILIGSEFAANRVSFTDSRLLSSRICGARASMVDS 60

Query: 61  YGSSDFVKRMEQAWEISQQPTPICCSSCHSNGHVECQWCKGTGFFILGDNMLCQVPSRNT 120
           YGSSDFVKRMEQAWEISQQPTPICCSSCHSNGHVECQWCKGTGFFILGDNMLCQVPSRNT
Sbjct: 61  YGSSDFVKRMEQAWEISQQPTPICCSSCHSNGHVECQWCKGTGFFILGDNMLCQVPSRNT 120

Query: 121 SCVICAGKGSIRCSDCKGTGYRAKWLDSLYIVSESVKFMLFIEYHIEVTFGSQGVLSMPF 180
           SCVICAGKGSIRCSDCKGTGYRAKWL       ESVKFMLFIEYHIEVTFGSQGVLSMPF
Sbjct: 121 SCVICAGKGSIRCSDCKGTGYRAKWL-------ESVKFMLFIEYHIEVTFGSQGVLSMPF 180

Query: 181 NLSTSLASASELCAQILLHGLSKRCHENTCMSQQKI 217
           NLSTSLASASELCAQILLHGLSKRCHENTCMSQQKI
Sbjct: 181 NLSTSLASASELCAQILLHGLSKRCHENTCMSQQKI 209

[Close]

BLAST of CmoCh09G003970 vs. NCBI nr
Match: XP_022935899.1 (uncharacterized protein LOC111442664 [Cucurbita moschata])

HSP 1 Score: 307.4 bits (786), Expect = 9.9e-80
Identity = 146/146 (100.00%), Postives = 146/146 (100.00%), Query Frame = 0


Query: 1   MSSSVCFRPVIIAKSIDGRGFSSTRIILIGSEFAANRVSFTDSRLLSSRICGARASMVDS 60
           MSSSVCFRPVIIAKSIDGRGFSSTRIILIGSEFAANRVSFTDSRLLSSRICGARASMVDS
Sbjct: 1   MSSSVCFRPVIIAKSIDGRGFSSTRIILIGSEFAANRVSFTDSRLLSSRICGARASMVDS 60

Query: 61  YGSSDFVKRMEQAWEISQQPTPICCSSCHSNGHVECQWCKGTGFFILGDNMLCQVPSRNT 120
           YGSSDFVKRMEQAWEISQQPTPICCSSCHSNGHVECQWCKGTGFFILGDNMLCQVPSRNT
Sbjct: 61  YGSSDFVKRMEQAWEISQQPTPICCSSCHSNGHVECQWCKGTGFFILGDNMLCQVPSRNT 120

Query: 121 SCVICAGKGSIRCSDCKGTGYRAKWL 147
           SCVICAGKGSIRCSDCKGTGYRAKWL
Sbjct: 121 SCVICAGKGSIRCSDCKGTGYRAKWL 146

[Close]

BLAST of CmoCh09G003970 vs. NCBI nr
Match: KAG7024403.1 (hypothetical protein SDJN02_13217 [Cucurbita argyrosperma subsp. argyrosperma])

HSP 1 Score: 305.1 bits (780), Expect = 4.9e-79
Identity = 145/146 (99.32%), Postives = 145/146 (99.32%), Query Frame = 0


Query: 1   MSSSVCFRPVIIAKSIDGRGFSSTRIILIGSEFAANRVSFTDSRLLSSRICGARASMVDS 60
           MSSSVCFRPVIIAKSIDGRGFSSTRIILIGSEFAANRVSFTDSRLLSSRICGARASMVDS
Sbjct: 1   MSSSVCFRPVIIAKSIDGRGFSSTRIILIGSEFAANRVSFTDSRLLSSRICGARASMVDS 60

Query: 61  YGSSDFVKRMEQAWEISQQPTPICCSSCHSNGHVECQWCKGTGFFILGDNMLCQVPSRNT 120
           YGSSDFVKRMEQAWEISQQPTPICCSSCHSNGHVECQWCKGTGFFILGDNMLCQVPSRNT
Sbjct: 61  YGSSDFVKRMEQAWEISQQPTPICCSSCHSNGHVECQWCKGTGFFILGDNMLCQVPSRNT 120

Query: 121 SCVICAGKGSIRCSDCKGTGYRAKWL 147
           SCVICAGKGSIRC DCKGTGYRAKWL
Sbjct: 121 SCVICAGKGSIRCFDCKGTGYRAKWL 146

[Close]

BLAST of CmoCh09G003970 vs. NCBI nr
Match: XP_022977132.1 (uncharacterized protein LOC111477293 [Cucurbita maxima])

HSP 1 Score: 304.3 bits (778), Expect = 8.4e-79
Identity = 143/146 (97.95%), Postives = 146/146 (100.00%), Query Frame = 0


Query: 1   MSSSVCFRPVIIAKSIDGRGFSSTRIILIGSEFAANRVSFTDSRLLSSRICGARASMVDS 60
           M+SSVCFRPVI+AKSIDGRGFSSTRIILIGSEFAANRVSFTDSRLLSSRICGARAS+VDS
Sbjct: 1   MTSSVCFRPVILAKSIDGRGFSSTRIILIGSEFAANRVSFTDSRLLSSRICGARASLVDS 60

Query: 61  YGSSDFVKRMEQAWEISQQPTPICCSSCHSNGHVECQWCKGTGFFILGDNMLCQVPSRNT 120
           YGSSDFVKRMEQAWEISQQPTPICCSSCHSNGHVECQWCKGTGFFILGDNMLCQVPSRNT
Sbjct: 61  YGSSDFVKRMEQAWEISQQPTPICCSSCHSNGHVECQWCKGTGFFILGDNMLCQVPSRNT 120

Query: 121 SCVICAGKGSIRCSDCKGTGYRAKWL 147
           SCVICAGKGSIRCSDCKGTGYRAKWL
Sbjct: 121 SCVICAGKGSIRCSDCKGTGYRAKWL 146

[Close]

BLAST of CmoCh09G003970 vs. NCBI nr
Match: XP_023534880.1 (uncharacterized protein LOC111796478 [Cucurbita pepo subsp. pepo])

HSP 1 Score: 298.1 bits (762), Expect = 6.0e-77
Identity = 141/146 (96.58%), Postives = 144/146 (98.63%), Query Frame = 0


Query: 1   MSSSVCFRPVIIAKSIDGRGFSSTRIILIGSEFAANRVSFTDSRLLSSRICGARASMVDS 60
           M+SSVCF PVI+AKSIDGRGFSSTRIILIGSEFAANRV FTDSRLLSSRICGARASMV+S
Sbjct: 1   MTSSVCFGPVIMAKSIDGRGFSSTRIILIGSEFAANRVLFTDSRLLSSRICGARASMVNS 60

Query: 61  YGSSDFVKRMEQAWEISQQPTPICCSSCHSNGHVECQWCKGTGFFILGDNMLCQVPSRNT 120
           YGSSDFVKRMEQAWEISQQPTPICCSSCHSNGHVECQWCKGTGFFILGDNMLCQVPSRNT
Sbjct: 61  YGSSDFVKRMEQAWEISQQPTPICCSSCHSNGHVECQWCKGTGFFILGDNMLCQVPSRNT 120

Query: 121 SCVICAGKGSIRCSDCKGTGYRAKWL 147
           SCVICAGKGSIRCSDCKGTGYRAKWL
Sbjct: 121 SCVICAGKGSIRCSDCKGTGYRAKWL 146

[Close]

BLAST of CmoCh09G003970 vs. TAIR 10
Match: AT2G24860.1 (DnaJ/Hsp40 cysteine-rich domain superfamily protein )

HSP 1 Score: 166.0 bits (419), Expect = 3.3e-41
Identity = 85/148 (57.43%), Postives = 104/148 (70.27%), Query Frame = 0


Query: 1   MSSSVCFRPVIIAKSIDGRGFSSTRIILIGSEFAANRVSFTDSRLLSSRICGARASMVDS 60
           M+  +C    ++AKSI    ++S RI  +G      R   T +          +AS VDS
Sbjct: 1   MTICMCCDSHLVAKSI-LNPWNSPRITKLGFVPVVRRFPATTT---------VKASAVDS 60

Query: 61  -YGSSDFVKRMEQAWEISQQPTPICCSSCHSNGHVECQWCKGTGFFILGDNMLCQVPSRN 120
              SS+F KRM+QAW ISQQP+P+ CSSC+S GHVEC+WC GTGFFILGDNMLCQVPSRN
Sbjct: 61  PESSSNFAKRMDQAWIISQQPSPVGCSSCNSKGHVECKWCAGTGFFILGDNMLCQVPSRN 120

Query: 121 TSCVICAGKGSIRCSDCKGTGYRAKWLD 148
           TSCVIC+G+GS  CSDCKGTG+RAKWL+
Sbjct: 121 TSCVICSGQGSASCSDCKGTGFRAKWLE 138

[Close]

BLAST of CmoCh09G003970 vs. TAIR 10
Match: AT1G75690.1 (DnaJ/Hsp40 cysteine-rich domain superfamily protein )

HSP 1 Score: 42.7 bits (99), Expect = 4.2e-04
Identity = 19/66 (28.79%), Postives = 36/66 (54.55%), Query Frame = 0


Query: 85  CSSCHSNGHVECQWCKGTGFFILGDNMLCQV---PSRNTSCVICAGKGSIRCSDCKGTGY 144
           C  C+  G  +C+ C G+G      N+  ++       ++C+ C G GS+ C+ C+G+G 
Sbjct: 87  CFPCNGTGAQKCRLCVGSG------NVTVELGGGEKEVSNCINCDGAGSLTCTTCQGSGV 146

Query: 145 RAKWLD 148
           + ++LD
Sbjct: 147 QPRYLD 146

The following BLAST results are available for this feature:

BLAST of CmoCh09G003970 vs.


Match Name	E-value	Identity	Description

BLAST of CmoCh09G003970 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A6J1F6R2	4.8e-80	100.00	uncharacterized protein LOC111442664 OS=Cucurbita moschata OX=3662 GN=LOC1114426...	[more]
A0A6J1IHL0	4.1e-79	97.95	uncharacterized protein LOC111477293 OS=Cucurbita maxima OX=3661 GN=LOC111477293...	[more]
A0A1S3BVK1	4.0e-66	84.25	chaperone protein DnaJ OS=Cucumis melo OX=3656 GN=LOC103493730 PE=4 SV=1	[more]
A0A0A0L478	1.1e-65	83.56	Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_4G651790 PE=4 SV=1	[more]
A0A6J1CHM4	6.3e-64	81.51	uncharacterized protein LOC111011719 OS=Momordica charantia OX=3673 GN=LOC111011...	[more]

BLAST of CmoCh09G003970 vs. NCBI nr


Match Name	E-value	Identity	Description
KAG6591516.1	3.6e-114	96.76	hypothetical protein SDJN03_13862, partial [Cucurbita argyrosperma subsp. sorori...	[more]
XP_022935899.1	9.9e-80	100.00	uncharacterized protein LOC111442664 [Cucurbita moschata]	[more]
KAG7024403.1	4.9e-79	99.32	hypothetical protein SDJN02_13217 [Cucurbita argyrosperma subsp. argyrosperma]	[more]
XP_022977132.1	8.4e-79	97.95	uncharacterized protein LOC111477293 [Cucurbita maxima]	[more]
XP_023534880.1	6.0e-77	96.58	uncharacterized protein LOC111796478 [Cucurbita pepo subsp. pepo]	[more]

BLAST of CmoCh09G003970 vs. TAIR 10


Match Name	E-value	Identity	Description
AT2G24860.1	3.3e-41	57.43	DnaJ/Hsp40 cysteine-rich domain superfamily protein	[more]
AT1G75690.1	4.2e-04	28.79	DnaJ/Hsp40 cysteine-rich domain superfamily protein	[more]

InterPro

Analysis Name: InterPro Annotations of Cucurbita moschata (Rifu) v1
Date Performed: 2021-10-25

Position :

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IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	PANTHER	PTHR15852	PLASTID TRANSCRIPTIONALLY ACTIVE PROTEIN	coord: 39..147
None	No IPR available	PANTHER	PTHR15852:SF66	OS09G0423700 PROTEIN	coord: 39..147
IPR036410	Heat shock protein DnaJ, cysteine-rich domain superfamily	SUPERFAMILY	57938	DnaJ/Hsp40 cysteine-rich domain	coord: 83..142

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
CmoCh09G003970.1	CmoCh09G003970.1	mRNA