CmoCh09G003540 (gene) Cucurbita moschata (Rifu) v1

Overview


Name	CmoCh09G003540
Type	gene
Organism	Cucurbita moschata (Cucurbita moschata (Rifu) v1)
Description	SAM_MT_RSMB_NOP domain-containing protein
Location	Cmo_Chr09: 1530462 .. 1535652 (+)
RNA-Seq Expression	CmoCh09G003540
Synteny	CmoCh09G003540

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonfive_prime_UTRCDSpolypeptide

Hold the cursor over a type above to highlight its positions in the sequence below.

CATTTCACAGCACAATTGGGCTCAACGACCTTCACAGGGTCTCGATTGGAGTTTGGAGTGTGCCTTCTGCGCAGCCATGGGGCGCGTTAACCCCAGAACCAAGCCATCGGTGGCGGGAACCGCCGGTAAATCAGAAAGTCGGCGGATGAGCAACGCGGACCGTTCGGCATACTTCGCTAGGAGAGAGGCGGCGAAGATATTGCGGCGTGTTCTTGAGGGTGATGCTCAACGTCGAGCCGTCGCCTCCATTAAGTCACTCGTTTATGCTCCGTCTGTTCGGAATAAGAAGGGTACATTCGCTCTTGTTTGCAAGACTCTCAAGTGTAAGTTCTGAACAACGACTCTTTCCCGCCATGAATGCTGAAAAGGATTTTCAAACGATTCTCGTGTAGGTATCAGAAGAAAATATTGGTTTTAGTTCAACATTTTGTTTTGCGATTGAATAGGAGTGTTAGGAATCATGTATATATTGTCCATTTTGAGCCTAAGCTTTCATGGGTTTGCTTTGGGTTTGCTTTTGCTTTCTCCAACAATGATGTTGGAGATGTATTCCTTAATTATAAACCCATAATCATTCTTTAAATTAGTCATAGCGGGACTCCGAACAATTCCAACCATCATTAGCAATCCTCCCCTCGAATAAAGTATACCATAGAGCCTCTCCTGAAGCTATGTAGTCTCGAATAGCCTCTCCTTAAATGAGGTTCGACTCCATTCTCTGGAGCCATCGAATAAGAACACCATTTGTTCGAAATTTAAGGATTCTATTCACATGATTAAAATAAGGGCACTCTGATGATATCATGTTAGGAATCACGAATCTCCACAATGGTATGATATTGTCCACTTTGAGCATAATCTCTCGTGACTTTGCTGTTAGTTTCATTCCAATGGAGATTTATTCCTCAATTCTGAACCCAAGATCATTCCCTAAATTAGCCAAGGTCAGGCTCCCTCCCAACCAACCATCCTCAACCGCCTATATTGTAATGCAACAGTTTTTGCTCTACAACTTCGAACTGGATTGATAGCGTAGCAATAGATTATCTGGGAAATTGAAATCCTATTTATTTGATGTGAATGATTATGTGACAAGCTCGGTAAATCATCTCTTTCCTCGCCCTTCAGTGGTAATATCTGCGGTGATGTAGCATAACTAAAAAGGTTCATTTTGTAGCTTTCTGAATTCTCTCGCTTTGGTTGTATTATTAGACCTCCCTATAATCAAGGAAGTACTGGAGGCTGCTGATTTATTGAGCAACAAATGGAAGGTACTCTTGCATCTTCTTTGTAATTCATTTGCTTCATACATATTTCTCAAGTCTTGGATAATTCTGTCTTGATAGCTTTCTCACTTACCACAAACATACCATAACATTAATCTAATATCGTTGCAGAGGCAGAAGGAATTAATTTATGTCATCATGTATGATATCCTCCTAGGCCAGGTATTTTATAAATCTTAGATCAAGACAATATCAGTTTATCATTCAAAGGTCGACTCCGAAAATGTTTTATGATAGTTGAACAAGCGGGGGTGGATTTATTGTTGCTCAAATTCTGTGTCGACCATCAAGATGTTTTCAAATTTATTTACTCGAAATCAGTTTTGTCCATCTTCAATAGTAACTCTATGGGCATGGCTTTGAGTTTAGAAGTACTTATATCATCAAGAGTTACTGGGTCCGCTGGGAGTTTGGAGGTCGGATCGTGTATTTCAATACCTTGGATAAATTATTGTTACAATAATGTGTCTAGTGAATATGTAAAAACTTCTGCTACTGAGACTGCTGCAGCTTGCTTATTTTACATTTGGTGTTGATTGACAATATTTTATGGAACTATGCGTAGAAAACCCCTTTAGCTGGCGATGCAGAGAAGTTTCTTATGCGGCAGCAAAGCGCTTTACAATCTGTGGTTACACAGCTTTTGTCAAAGAGAAAAGCAAATAATATTGAAGACTTAATAGCCCGTGGTCATAATCCTGGTAAGTGTTCTTTATGATTCTGTTGTTGTGCTGATTCTACTAGCTTAGGCCTGGTTTGATTACTTTTTAGTTTTCTGTTTTTTACTCGCATTCTTAGTCAAATTCTAAAAACAGAACAATTTTTTGAAAACGAAAACTATTTTTCGTAGTTATCAAAACTTGACTTGATTTTTTAAAACACGAGTAGAAATGAATACAAAATGTAAAAACTTAGGAGTAGAAGTAGTGTTTACAAGCTTAATTTTTATGGTTATCAAACGGACCTTAGTTATTATACCTATTCAACTCTGATCTTCAAATTCAGGTGTTTCAAGGCCTCGTTTTATCCGTGTGAATACTTTGAAGATGGATGTTCACACTGCAATACAAGAATTAGGCAAAAGATATGCAGTGAGTTCCAAAATCTTTCCGAATTGTTGTTGATGTGTTTTAAAAGTAGTGTAGAGTTCAATAGCCACAGCAGAGTTATCTTCACTTATTGCACACTTCATCATTTTGTAAATTATTAATTATTCTAAGCGCCTCCTAGCCCCTTTAATCCTTTTAAAACATGCATAATGGATGCTGGGATAGAATCTGTCCTGAGTTTTATTGTTGGTAAGGTTTGTATTCCATTTGGACACTTCAGAAGAATTCCTTAAAGGTGCTGGTTATTATGTCAAATAGGTTCAGAAGGATGACATGGTTCCTGACCTCTTGGTACTTCCTCCAGGCAGCGATTTACATGATCATCCATTGGTTGCAGATGGGAGTATCTTCATGCAAGTAAGTCCCTAGTTTTGTTCAGTCCAATTTATCACGAACATGTATTAAAGGTCAAGGGTTGCTCTTCTTTCTTTCTATTGTATAACAACAAGTTAGTGCTGATGTTTGTAGGGGAAGGCTAGTTCTATGGTTGCAGTAGCCCTTGATCCCAAGCCAGGATGGGAAGTAAGACCACTTAGCCTGTACTTACTGTCGAGCTCACTTCATAATTTGGATCGATTTCTATGGTTTCTTGGTTTCTCCTCGCTCTTTTCCACCTTTAATTGATATTATAAGTTCTGTCGAACAACTTACTGTTTTACGAACAACTTAACATCCTTTCTGGTGTATGAACTCGTGTTTTATTGCTTCTTTTCTTTCCACCACTTTATAACATGTTTCAGCTTTGTTCATCCTCCCTTTAGCTTGATTACTTTAGCGTTGATACTTTCCGTTCTGATATTTTGTATTATTGAAGGTCCTTGATGCATGTTCAGCTCCGGGTAACAAAACTGTTCACCTTGCCTCTCTCATGAACGGAGAAGGAAGGATCATTGCATGTGAATTGAACGAAAACAGGGTCAAACGCTTACAACATACAATCAAACTATCGGGAGCTTCTAGTATCCTTTGTCGATAGTATATGGGTTTCGTAACTATCAACTCTCTATCCATCTGCAATTTTACATCATGTTGTTTTCTCTAACTAGATTAAATCACTTTGTATATGAGCCTTTCATTTTAATGGGTTGGAGGCTAAAAAGTAACATGATGTCCCCGTTTATGCCATTACCAGCTAATTTCCTGAATAGTTCCTTTATTGATTCCAATATGTTCCTGTAACTTGTACGTTACCTTGATTAAACTTAACCTTGGTGCAAGATATAGAAGTTTTGCATGGGGATTTCCTTGCTCTTGATCCAAAAGATCCTTCGTTGTCCAAAGTAAGTTCTGCTCCGATCCGCACTGATCATCTTTTGTTCAGTTACCACCCTCCTGTTCTTTTAAACGATGGCTTCTCTGATGTGGTTAGATTAGCCAAGCATTACAGCTTTAAGCGTTTACAAGGAAAGTCCATTGCCCCTTGGTTTTGACAGAACGATAGAAATAATAAGTAATAACCACAGCCATTATTGCTTAGAAATTAGAATAGTTTGCATTTTTGCCACGGCATACTGATATTCAGCTGGAAAATGTTCACTCTTGCATCATCCTCTTTTGATTTTTCAAGGTCCGTGCCATTCTTTTGGATCCTTCCTGCTCTGGCTCTGGAACTGCAGCTGCTAGATTAGATCATTTGCTCCCGTCACATGTTGAAGGTAACTCCTAGCCGTGTAATAGTTAGCACAATTCGTAATCTATTATCTGCTATATCTTCTTCTGGTTAGTGCTACCTTCATCTGTCTTCATGATTTGTGCAGGGAAGAGCTCTGGGGATGACCTTGAACGACTGGAAAAACTTGCTGCCTTTCAGAGGAAGGCTCTAGCTCATGCATTTTCCTGTGAGTTCAGTTTCCTATAGCAATGTATTCTCCTATAAAGCAATCCCTTTTCTATTCGCTGCTCATGACTAACGTCATCTCCTCGCAGTTCCTGCCGTAGAGAGAATTGTTTACAGCACTTGTTCTGTTCATCAAGTTGAAAACGAAGATGTTGTACAGTCATTATTACCTCTGGCTGAATCGCATGGCTTTCAACTGGAAACTCCGTTCCCACAGTGGCAGCGGCGAGGTCACCCAGTTTTCGCCGGCGGTAAGTATCAACAGATTATTTGGCGTCTTTTTTTGAACTCGCCCTATTCAAATTAGAGCTATTTAGAGAACTTTTGGATTATTTTCTCATTATGCAGCTAACCATTTGCTTCGAACCGACCCCATCGAAGACACAGAAGGATTCTTCATAGCACTATTTAAGAAGCAGAACACGACGCACCCATTTCCCCAAATTTCTAGTAGAGACAAAAGCTCTAGAAATCATGGTGGAAACGTCAGGAACAGTCGGGCAGTTGCGTGCCTTCCGACCAGCATGTTCAAAATGTGGATGTATGCACATTCAAAGAGGACACGACGGAGAAAAATCCACACTCCATCCAAAACCAGAACAAGATCTTGATTATTCTCAAAACAGAGCACAGTAAAATCTTCAAAGTTTCAACATTTCTGCTCAGGTTAGTAGAAGTTAGAATTCAATTCAAGCCTAGCTTTTCATTGTTATCTTTAAGTTCAGAATATTGCATAGCGGCTAATTGACTGTGTCTTATATCTAGACGACAGACGTGTTATAAAACCTTAAAATTTTCATTAAAATAAACCTTCAAGCACACACTACAGAGGTAACCCCCACATATCGGTTATTACGACAGCAAAAAGGAAAGGGAAAATAAAACACACACGTACACCATGGTGCCATATCTTGAAAACCCATGATCCAAAGTTCAGAAGTAGGAATCCACATCCATAA

mRNA sequence

CATTTCACAGCACAATTGGGCTCAACGACCTTCACAGGGTCTCGATTGGAGTTTGGAGTGTGCCTTCTGCGCAGCCATGGGGCGCGTTAACCCCAGAACCAAGCCATCGGTGGCGGGAACCGCCGGTAAATCAGAAAGTCGGCGGATGAGCAACGCGGACCGTTCGGCATACTTCGCTAGGAGAGAGGCGGCGAAGATATTGCGGCGTGTTCTTGAGGGTGATGCTCAACGTCGAGCCGTCGCCTCCATTAAGTCACTCGTTTATGCTCCGTCTGTTCGGAATAAGAAGGGTACATTCGCTCTTGTTTGCAAGACTCTCAAGTACCTCCCTATAATCAAGGAAGTACTGGAGGCTGCTGATTTATTGAGCAACAAATGGAAGAGGCAGAAGGAATTAATTTATGTCATCATGTATGATATCCTCCTAGGCCAGAAAACCCCTTTAGCTGGCGATGCAGAGAAGTTTCTTATGCGGCAGCAAAGCGCTTTACAATCTGTGGTTACACAGCTTTTGTCAAAGAGAAAAGCAAATAATATTGAAGACTTAATAGCCCGTGGTCATAATCCTGGTGTTTCAAGGCCTCGTTTTATCCGTGTGAATACTTTGAAGATGGATGTTCACACTGCAATACAAGAATTAGGCAAAAGATATGCAGTTCAGAAGGATGACATGGTTCCTGACCTCTTGGTACTTCCTCCAGGCAGCGATTTACATGATCATCCATTGGTTGCAGATGGGAGTATCTTCATGCAAGGGAAGGCTAGTTCTATGGTTGCAGTAGCCCTTGATCCCAAGCCAGGATGGGAAGTCCTTGATGCATGTTCAGCTCCGGGTAACAAAACTGTTCACCTTGCCTCTCTCATGAACGGAGAAGGAAGGATCATTGCATGTGAATTGAACGAAAACAGGGTCAAACGCTTACAACATACAATCAAACTATCGGGAGCTTCTAATATAGAAGTTTTGCATGGGGATTTCCTTGCTCTTGATCCAAAAGATCCTTCGTTGTCCAAAGTCCGTGCCATTCTTTTGGATCCTTCCTGCTCTGGCTCTGGAACTGCAGCTGCTAGATTAGATCATTTGCTCCCGTCACATGTTGAAGGGAAGAGCTCTGGGGATGACCTTGAACGACTGGAAAAACTTGCTGCCTTTCAGAGGAAGGCTCTAGCTCATGCATTTTCCTTTCCTGCCGTAGAGAGAATTGTTTACAGCACTTGTTCTGTTCATCAAGTTGAAAACGAAGATGTTGTACAGTCATTATTACCTCTGGCTGAATCGCATGGCTTTCAACTGGAAACTCCGTTCCCACAGTGGCAGCGGCGAGGTCACCCAGTTTTCGCCGGCGCTAACCATTTGCTTCGAACCGACCCCATCGAAGACACAGAAGGATTCTTCATAGCACTATTTAAGAAGCAGAACACGACGCACCCATTTCCCCAAATTTCTAGTAGAGACAAAAGCTCTAGAAATCATGGTGGAAACGACACGACGGAGAAAAATCCACACTCCATCCAAAACCAGAACAAGATCTTGATTATTCTCAAAACAGAGCACAGTAAAATCTTCAAAGTTTCAACATTTCTGCTCAGCACACACTACAGAGGTAACCCCCACATATCGGTTATTACGACAGCAAAAAGGAAAGGGAAAATAAAACACACACGTACACCATGGTGCCATATCTTGAAAACCCATGATCCAAAGTTCAGAAGTAGGAATCCACATCCATAA

Coding sequence (CDS)

ATGGGGCGCGTTAACCCCAGAACCAAGCCATCGGTGGCGGGAACCGCCGGTAAATCAGAAAGTCGGCGGATGAGCAACGCGGACCGTTCGGCATACTTCGCTAGGAGAGAGGCGGCGAAGATATTGCGGCGTGTTCTTGAGGGTGATGCTCAACGTCGAGCCGTCGCCTCCATTAAGTCACTCGTTTATGCTCCGTCTGTTCGGAATAAGAAGGGTACATTCGCTCTTGTTTGCAAGACTCTCAAGTACCTCCCTATAATCAAGGAAGTACTGGAGGCTGCTGATTTATTGAGCAACAAATGGAAGAGGCAGAAGGAATTAATTTATGTCATCATGTATGATATCCTCCTAGGCCAGAAAACCCCTTTAGCTGGCGATGCAGAGAAGTTTCTTATGCGGCAGCAAAGCGCTTTACAATCTGTGGTTACACAGCTTTTGTCAAAGAGAAAAGCAAATAATATTGAAGACTTAATAGCCCGTGGTCATAATCCTGGTGTTTCAAGGCCTCGTTTTATCCGTGTGAATACTTTGAAGATGGATGTTCACACTGCAATACAAGAATTAGGCAAAAGATATGCAGTTCAGAAGGATGACATGGTTCCTGACCTCTTGGTACTTCCTCCAGGCAGCGATTTACATGATCATCCATTGGTTGCAGATGGGAGTATCTTCATGCAAGGGAAGGCTAGTTCTATGGTTGCAGTAGCCCTTGATCCCAAGCCAGGATGGGAAGTCCTTGATGCATGTTCAGCTCCGGGTAACAAAACTGTTCACCTTGCCTCTCTCATGAACGGAGAAGGAAGGATCATTGCATGTGAATTGAACGAAAACAGGGTCAAACGCTTACAACATACAATCAAACTATCGGGAGCTTCTAATATAGAAGTTTTGCATGGGGATTTCCTTGCTCTTGATCCAAAAGATCCTTCGTTGTCCAAAGTCCGTGCCATTCTTTTGGATCCTTCCTGCTCTGGCTCTGGAACTGCAGCTGCTAGATTAGATCATTTGCTCCCGTCACATGTTGAAGGGAAGAGCTCTGGGGATGACCTTGAACGACTGGAAAAACTTGCTGCCTTTCAGAGGAAGGCTCTAGCTCATGCATTTTCCTTTCCTGCCGTAGAGAGAATTGTTTACAGCACTTGTTCTGTTCATCAAGTTGAAAACGAAGATGTTGTACAGTCATTATTACCTCTGGCTGAATCGCATGGCTTTCAACTGGAAACTCCGTTCCCACAGTGGCAGCGGCGAGGTCACCCAGTTTTCGCCGGCGCTAACCATTTGCTTCGAACCGACCCCATCGAAGACACAGAAGGATTCTTCATAGCACTATTTAAGAAGCAGAACACGACGCACCCATTTCCCCAAATTTCTAGTAGAGACAAAAGCTCTAGAAATCATGGTGGAAACGACACGACGGAGAAAAATCCACACTCCATCCAAAACCAGAACAAGATCTTGATTATTCTCAAAACAGAGCACAGTAAAATCTTCAAAGTTTCAACATTTCTGCTCAGCACACACTACAGAGGTAACCCCCACATATCGGTTATTACGACAGCAAAAAGGAAAGGGAAAATAAAACACACACGTACACCATGGTGCCATATCTTGAAAACCCATGATCCAAAGTTCAGAAGTAGGAATCCACATCCATAA

Protein sequence

MGRVNPRTKPSVAGTAGKSESRRMSNADRSAYFARREAAKILRRVLEGDAQRRAVASIKSLVYAPSVRNKKGTFALVCKTLKYLPIIKEVLEAADLLSNKWKRQKELIYVIMYDILLGQKTPLAGDAEKFLMRQQSALQSVVTQLLSKRKANNIEDLIARGHNPGVSRPRFIRVNTLKMDVHTAIQELGKRYAVQKDDMVPDLLVLPPGSDLHDHPLVADGSIFMQGKASSMVAVALDPKPGWEVLDACSAPGNKTVHLASLMNGEGRIIACELNENRVKRLQHTIKLSGASNIEVLHGDFLALDPKDPSLSKVRAILLDPSCSGSGTAAARLDHLLPSHVEGKSSGDDLERLEKLAAFQRKALAHAFSFPAVERIVYSTCSVHQVENEDVVQSLLPLAESHGFQLETPFPQWQRRGHPVFAGANHLLRTDPIEDTEGFFIALFKKQNTTHPFPQISSRDKSSRNHGGNDTTEKNPHSIQNQNKILIILKTEHSKIFKVSTFLLSTHYRGNPHISVITTAKRKGKIKHTRTPWCHILKTHDPKFRSRNPHP

Homology

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BLAST of CmoCh09G003540 vs. ExPASy Swiss-Prot
Match: Q8GYE8 (25S rRNA (cytosine-C(5))-methyltransferase NSUN5 OS=Arabidopsis thaliana OX=3702 GN=NSUN5 PE=1 SV=1)

HSP 1 Score: 594.7 bits (1532), Expect = 1.0e-168
Identity = 302/472 (63.98%), Postives = 367/472 (77.75%), Query Frame = 0


Query: 6   PRTKPSVAGTAGKSESRRMSNADRSAYFARREAAKILRRVLEGDAQRRAVASIKSLVYAP 65
           P+T P+          ++ S+ +RSA +ARREAA ILR VL GDA+RRAVASIKSLV +P
Sbjct: 78  PKTPPAT--------KQKFSSLERSALYARREAANILRTVLRGDAERRAVASIKSLVLSP 137

Query: 66  SVRNKKGTFALVCKTLKYLPIIKEVLEAADLLSNKWKRQKELIYVIMYDILLGQKTPLAG 125
           SVRNK+GTFALVC+TLKYL +IK+VL+ A++L++KWKRQ+ L++++ YDIL G+ TP  G
Sbjct: 138 SVRNKRGTFALVCETLKYLTVIKDVLDIANVLNSKWKRQEPLVFIVCYDILFGKDTPSIG 197

Query: 126 DAEKFLMRQQSALQSVVTQLLSKRKANNIEDLIARGHNPGVSRPRFIRVNTLKMDVHTAI 185
           DAEKFLMR + AL S +  LL ++K ++++ L+      G  +PR++RVNTLKMDV +A+
Sbjct: 198 DAEKFLMRHKEALLSGLATLLVRKKVDSVDQLLG-SKLTGHLKPRYVRVNTLKMDVDSAV 257

Query: 186 QELGKRYAVQKDDMVPDLLVLPPGSDLHDHPLVADGSIFMQGKASSMVAVALDPKPGWEV 245
           QEL K Y VQKD+ VPDLLVLPPGSDLH H LVA+G IF+QGKASSMVA AL P+ GWEV
Sbjct: 258 QELEKHYTVQKDETVPDLLVLPPGSDLHAHRLVANGRIFLQGKASSMVAAALQPQAGWEV 317

Query: 246 LDACSAPGNKTVHLASLMNGEGRIIACELNENRVKRLQHTIKLSGASNIEVLHGDFLALD 305
           LDACSAPGNKT+HLA+LM G+G+IIACELNE RVKRL+HTIKLSGASNIEV HGDFL L+
Sbjct: 318 LDACSAPGNKTIHLAALMEGQGKIIACELNEERVKRLEHTIKLSGASNIEVCHGDFLGLN 377

Query: 306 PKDPSLSKVRAILLDPSCSGSGTAAARLDHLLPSHVEGKSSGDDLERLEKLAAFQRKALA 365
           PKDPS +K+RAILLDPSCSGSGT   RLDHLLPSH E  +   D  RL KLA FQ+KALA
Sbjct: 378 PKDPSFAKIRAILLDPSCSGSGTITDRLDHLLPSHSEDNNMNYDSMRLHKLAVFQKKALA 437

Query: 366 HAFSFPAVERIVYSTCSVHQVENEDVVQSLLPLAESHGFQLETPFPQWQRRGHPVFAGAN 425
           HA SFP VER+VYSTCS++Q+ENEDVV S+LPLA S GF+L TPFPQWQRRG PVFAG+ 
Sbjct: 438 HALSFPKVERVVYSTCSIYQIENEDVVSSVLPLASSLGFKLATPFPQWQRRGLPVFAGSE 497

Query: 426 HLLRTDPIEDTEGFFIALFKKQNTTHPFPQISSRDKSSRNHGGNDTTEKNPH 478
           HLLR DP+ED EGFFIALF + N           D+  R      T + +P+
Sbjct: 498 HLLRMDPVEDKEGFFIALFVRANKLDNPKSSELPDRVCRRRPKERTMQLHPY 540

[Close]

BLAST of CmoCh09G003540 vs. ExPASy Swiss-Prot
Match: Q8K4F6 (28S rRNA (cytosine-C(5))-methyltransferase OS=Mus musculus OX=10090 GN=Nsun5 PE=1 SV=2)

HSP 1 Score: 270.8 bits (691), Expect = 3.4e-71
Identity = 170/440 (38.64%), Postives = 247/440 (56.14%), Query Frame = 0


Query: 45  VLEGDAQRRAVASIKSLVYAPSVRNKKGTFALVCKTLKYLPIIKEVLEAADLLSNKWKRQ 104
           VL G   R+   S+K LVY+ + +N K  +ALVC+T +Y  ++  V+ +A LL  + K +
Sbjct: 10  VLAGVESRQ--GSLKGLVYSSNFQNLKQLYALVCETQRYSAVLDAVIASAGLLRAEKKLR 69

Query: 105 KELIYVIMYDILLGQKTPLAGDAEKFLM-RQQSALQSVVTQLLSKRKANNIEDLIARGHN 164
             L  V++Y++LLG+     G   K L+ R Q+ L++ + +L   R  +  EDL+     
Sbjct: 70  PHLAKVLVYELLLGKGFRGGGGRWKALLGRHQARLKAELARLKVHRGVSRNEDLLQESSR 129

Query: 165 PGVSR--PRFIRVNTLKMDVHTAIQEL--------GKRYAVQK-----------DDMVPD 224
           PG +   PRF+RVNTLK     AI           G+  +++            D ++P+
Sbjct: 130 PGQAYQVPRFVRVNTLKTRPEDAIDYFKRQGFSYQGRASSLEDLRALKGQHFLLDPLLPE 189

Query: 225 LLVLPPGSDLHDHPLVADGSIFMQGKASSMVAVALDPKPGWEVLDACSAPGNKTVHLASL 284
           LLV P  +DLH+HPL   G + +Q KAS + A+ L P PG  V+DAC+APGNKT ++A+L
Sbjct: 190 LLVFPAQTDLHEHPLYRAGHLILQDKASCLPAMLLSPPPGSHVIDACAAPGNKTSYIAAL 249

Query: 285 MNGEGRIIACELNENRVKRLQHTIKLSGASNIEVLHGDFLALDPKDPSLSKVRAILLDPS 344
           +  +G+I A + +  R+  +   +  +G S  E+   DFL + P D   S+V+ ILLDPS
Sbjct: 250 LKNQGKIFAFDQDAKRLAAMATLVARAGVSCCELAEKDFLTVSPSDQRYSQVQYILLDPS 309

Query: 345 CSGSGTAAARLDHLLPSHVEGKSSGDDLERLEKLAAFQRKALAHAFSFPAVERIVYSTCS 404
           CSGSG  + +L+     H EG  S    ERL+ LA FQ++AL HA  FP+++R+VYSTCS
Sbjct: 310 CSGSGMLSRQLE----EHGEGTPS---KERLQALAGFQQRALCHALRFPSLQRLVYSTCS 369

Query: 405 VHQVENEDVVQSLLPLAESHGFQLETPFPQWQRRGHPVFAGANHLLRTDPIED-TEGFFI 461
           + Q ENEDVVQ  L    S  F+L    P W  RG   F G+ H LR  P    T GFFI
Sbjct: 370 LCQEENEDVVQEALQ-HNSGTFRLAPVLPTWPHRGLSTFPGSEHCLRASPETTLTGGFFI 429

[Close]

BLAST of CmoCh09G003540 vs. ExPASy Swiss-Prot
Match: Q96P11 (28S rRNA (cytosine-C(5))-methyltransferase OS=Homo sapiens OX=9606 GN=NSUN5 PE=1 SV=2)

HSP 1 Score: 268.5 bits (685), Expect = 1.7e-70
Identity = 165/425 (38.82%), Postives = 239/425 (56.24%), Query Frame = 0


Query: 45  VLEGDAQRRAVASIKSLVYAPSVRNKKGTFALVCKTLKYLPIIKEVLEAADLLSNKWKRQ 104
           VL G   R+   SIK LVY+ + +N K  +ALVC+T +Y  ++  V+ +A LL  + K +
Sbjct: 10  VLAGVESRQ--GSIKGLVYSSNFQNVKQLYALVCETQRYSAVLDAVIASAGLLRAEKKLR 69

Query: 105 KELIYVIMYDILLGQKTPLAGDAEKFLM-RQQSALQSVVTQLLSKRKANNIEDLIARGHN 164
             L  V++Y++LLG+     G   K L+ R Q+ L++ + +L   R  +  EDL+  G  
Sbjct: 70  PHLAKVLVYELLLGKGFRGGGGRWKALLGRHQARLKAELARLKVHRGVSRNEDLLEVGSR 129

Query: 165 PGVSR--PRFIRVNTLKM---DVHTAIQELGKRYAVQK----------------DDMVPD 224
           PG +   PRF+RVNTLK    DV    +  G  Y  +                 D ++P+
Sbjct: 130 PGPASQLPRFVRVNTLKTCSDDVVDYFKRQGFSYQGRASSLDDLRALKGKHFLLDPLMPE 189

Query: 225 LLVLPPGSDLHDHPLVADGSIFMQGKASSMVAVALDPKPGWEVLDACSAPGNKTVHLASL 284
           LLV P  +DLH+HPL   G + +Q +AS + A+ LDP PG  V+DAC+APGNKT HLA+L
Sbjct: 190 LLVFPAQTDLHEHPLYRAGHLILQDRASCLPAMLLDPPPGSHVIDACAAPGNKTSHLAAL 249

Query: 285 MNGEGRIIACELNENRVKRLQHTIKLSGASNIEVLHGDFLALDPKDPSLSKVRAILLDPS 344
           +  +G+I A +L+  R+  +   +  +G S  E+   DFLA+ P DP   +V  ILLDPS
Sbjct: 250 LKNQGKIFAFDLDAKRLASMATLLARAGVSCCELAEEDFLAVSPSDPRYHEVHYILLDPS 309

Query: 345 CSGSGTAAARLDHLLPSHVEGKSSGDDLERLEKLAAFQRKALAHAFSFPAVERIVYSTCS 404
           CSGSG  + +L+       E  +      RL  LA FQ++AL HA +FP+++R+VYSTCS
Sbjct: 310 CSGSGMPSRQLE-------EPGAGTPSPVRLHALAGFQQRALCHALTFPSLQRLVYSTCS 369

Query: 405 VHQVENEDVVQSLLPLAESHGFQLETPFPQWQRRGHPVFAGANHLLRTDPIED-TEGFFI 447
           + Q ENEDVV+  L       F+L    P W  RG   F GA H LR  P    + GFF+
Sbjct: 370 LCQEENEDVVRDALQ-QNPGAFRLAPALPAWPHRGLSTFPGAEHCLRASPETTLSSGFFV 424

[Close]

BLAST of CmoCh09G003540 vs. ExPASy Swiss-Prot
Match: O14039 (25S rRNA (cytosine-C(5))-methyltransferase rcm1 OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843) OX=284812 GN=rcm1 PE=3 SV=3)

HSP 1 Score: 217.2 bits (552), Expect = 4.5e-55
Identity = 148/432 (34.26%), Postives = 231/432 (53.47%), Query Frame = 0


Query: 57  SIKSLVYAPSVRNKKGTFALVCKTLKYLPIIKEVLEAADLLSNKWKRQKELIYVIMYDIL 116
           SIK L +     + K T+ALVC+TLKY P++ E++  ++LL  + K ++ L  V+++D+L
Sbjct: 20  SIKQLAFNSKKHDPKRTYALVCETLKYKPVLDEIIARSELLVLEKKLKENLARVLVHDLL 79

Query: 117 LGQK--TPLAGDAEKFLMRQQSALQSVVTQLLSKRKANNIEDLIARGHNPGVSRPRFIRV 176
           + ++  +   G  ++ ++R ++ L +   +L  K+   + E+L  +  NP VS PR++R+
Sbjct: 80  MSKRGLSISNGPIKECILRHKTRLNAEFVKLKVKKGVKSHEELALK--NP-VSLPRWLRI 139

Query: 177 NTLK-----------MDVHTAIQELG--KRYAVQKDDMVPDLLVLPPGSDLHDHPLVADG 236
           NT+K           +D  ++I+ELG  K Y    DD V +L+ + P   + ++ L  +G
Sbjct: 140 NTIKSTKDEVLQGLGLDKVSSIEELGPDKFYI---DDCVENLIAIDPSFPIVENSLYKEG 199

Query: 237 SIFMQGKASSMVAVALDPKPG--WEVLDACSAPGNKTVHLASLMNGEGRIIACELNENRV 296
            + +Q KAS   A  L    G   +++D C+APGNKT HLA+    +  I A E +  RV
Sbjct: 200 KVIIQDKASCFPAAVLAGLTGHVGDIIDGCAAPGNKTTHLAACF-PKSHIFAFERDAKRV 259

Query: 297 KRLQHTIKLSGASNIEVLHGDFLALDPKDPSLSKVRAILLDPSCSGSGTAAARLDHLLPS 356
           + L+  + +SGA+N+ + H DF   DPK      V  ILLDPSCSGSG   +R D+LL +
Sbjct: 260 QTLRKMVGISGANNVTIEHQDFTLTDPKSDLYRNVTHILLDPSCSGSG-IVSRQDYLLGN 319

Query: 357 HVEGKSSGDDLERLEKLAAFQRKALAHAFSFPAVERIVYSTCSVHQVENEDVVQSLLPLA 416
               +   +D ERLE L +FQ   L HA  FP    + YSTCSVH++ENE VV  +L   
Sbjct: 320 E---QDVTEDTERLENLCSFQSTILKHALQFPNCRHVTYSTCSVHRLENEQVVCEVLSQE 379

Query: 417 ESHGF-QLETPFPQWQRRGHPVFAG----ANHLLRTDP-IEDTEGFFIA-LFKKQNTTHP 465
                  L    P W+ RG P +      A  ++R  P    T GFF+A L+  Q     
Sbjct: 380 PDWKCNSLTKTLPNWKTRGIPEYCAQPSMAEGMIRCKPGAGGTIGFFVANLYHPQREQET 439

[Close]

BLAST of CmoCh09G003540 vs. ExPASy Swiss-Prot
Match: Q9NAA7 (26S rRNA (cytosine-C(5))-methyltransferase nsun-5 OS=Caenorhabditis elegans OX=6239 GN=nsun-5 PE=1 SV=2)

HSP 1 Score: 195.7 bits (496), Expect = 1.4e-48
Identity = 135/441 (30.61%), Postives = 214/441 (48.53%), Query Frame = 0


Query: 37  EAAKILRRVLEGDAQRRAVASIKSLVYAPSVRNKKGTFALVCKTLKYLPIIKEVLEAADL 96
           E A+I+R VL  +       S+++ VY  S +NKK    L C++LK+ P+  E+L+  +L
Sbjct: 9   EVAEIIRCVLAKE------KSVRNAVYGSSYKNKKALLRLSCESLKFRPVFDEILQDKEL 68

Query: 97  LSNKWKR----QKELIYVIMYDILLGQ-KTPLAGDAEKFLMRQQSALQSVVTQLLSKRKA 156
            S K         EL+YV+MY+ L+G   T  + + +  + R+   ++ V   +  + + 
Sbjct: 69  KSMKRDANIGGSVELLYVLMYETLVGSGLTRCSQELKSVISRRIQRIKEVEHAMQDEGRG 128

Query: 157 NNIEDLIARGHNPGVSRPRFIRVNTLKMDVHTAIQELG---------------------- 216
                    G    +  PR+ R+NTLK     A++ L                       
Sbjct: 129 IKAMKEADDGMKK-IQIPRYARINTLKWTADEAMKTLETEKWKILGTLKPENFAEMVTKM 188

Query: 217 KRYAVQKDDMVPDLLVLPPG-SDLHDHPLVADGSIFMQGKASSMVAVALDPKPGWEVLDA 276
           K   V  D  V +L++  P   + +++ +V    + +Q KAS + A  L+P+PG +V D 
Sbjct: 189 KDDEVYVDPHVENLIIFAPNIQNFYEYWMVEQRYLILQDKASCLPAFLLNPRPGSQVFDT 248

Query: 277 CSAPGNKTVHLASLMNGEGRIIACELNENRVKRLQHTIKLSGASNIEVLHGDFLALDPKD 336
           C+APG KT H A++M  +G++ A +   +RV  ++  +  S  +      GDFL  D  D
Sbjct: 249 CAAPGMKTSHAAAIMENQGKVWAMDRAADRVATMKQLLDASKVAIASSFCGDFLKTDVTD 308

Query: 337 PSLSKVRAILLDPSCSGSGTAAARLDHLLPSHVEGKSSGDDLERLEKLAAFQRKALAHAF 396
              SKV+  ++DP CSGSG    R+D +   + E        ERLEKL   Q   L HA 
Sbjct: 309 KKFSKVKFAIVDPPCSGSG-IVKRMDEITGGNAE-------KERLEKLKNLQAMILKHAL 368

Query: 397 SFPAVERIVYSTCSVHQVENEDVVQSLL--PLAESHGFQLETPFPQWQRRGHPVFAGANH 447
             P ++R VYSTCSVH+ ENE VV  +L       +    +   P+W  RG   +    H
Sbjct: 369 KLPGLKRAVYSTCSVHEEENEQVVDEVLLDTYVRQNYVLKKNVLPEWTYRGLKTYEVGEH 428

[Close]

BLAST of CmoCh09G003540 vs. ExPASy TrEMBL
Match: A0A6J1F919 (probable 28S rRNA (Cytosine-C(5))-methyltransferase OS=Cucurbita moschata OX=3662 GN=LOC111443222 PE=3 SV=1)

HSP 1 Score: 922.5 bits (2383), Expect = 8.1e-265
Identity = 469/469 (100.00%), Postives = 469/469 (100.00%), Query Frame = 0


Query: 1   MGRVNPRTKPSVAGTAGKSESRRMSNADRSAYFARREAAKILRRVLEGDAQRRAVASIKS 60
           MGRVNPRTKPSVAGTAGKSESRRMSNADRSAYFARREAAKILRRVLEGDAQRRAVASIKS
Sbjct: 1   MGRVNPRTKPSVAGTAGKSESRRMSNADRSAYFARREAAKILRRVLEGDAQRRAVASIKS 60

Query: 61  LVYAPSVRNKKGTFALVCKTLKYLPIIKEVLEAADLLSNKWKRQKELIYVIMYDILLGQK 120
           LVYAPSVRNKKGTFALVCKTLKYLPIIKEVLEAADLLSNKWKRQKELIYVIMYDILLGQK
Sbjct: 61  LVYAPSVRNKKGTFALVCKTLKYLPIIKEVLEAADLLSNKWKRQKELIYVIMYDILLGQK 120

Query: 121 TPLAGDAEKFLMRQQSALQSVVTQLLSKRKANNIEDLIARGHNPGVSRPRFIRVNTLKMD 180
           TPLAGDAEKFLMRQQSALQSVVTQLLSKRKANNIEDLIARGHNPGVSRPRFIRVNTLKMD
Sbjct: 121 TPLAGDAEKFLMRQQSALQSVVTQLLSKRKANNIEDLIARGHNPGVSRPRFIRVNTLKMD 180

Query: 181 VHTAIQELGKRYAVQKDDMVPDLLVLPPGSDLHDHPLVADGSIFMQGKASSMVAVALDPK 240
           VHTAIQELGKRYAVQKDDMVPDLLVLPPGSDLHDHPLVADGSIFMQGKASSMVAVALDPK
Sbjct: 181 VHTAIQELGKRYAVQKDDMVPDLLVLPPGSDLHDHPLVADGSIFMQGKASSMVAVALDPK 240

Query: 241 PGWEVLDACSAPGNKTVHLASLMNGEGRIIACELNENRVKRLQHTIKLSGASNIEVLHGD 300
           PGWEVLDACSAPGNKTVHLASLMNGEGRIIACELNENRVKRLQHTIKLSGASNIEVLHGD
Sbjct: 241 PGWEVLDACSAPGNKTVHLASLMNGEGRIIACELNENRVKRLQHTIKLSGASNIEVLHGD 300

Query: 301 FLALDPKDPSLSKVRAILLDPSCSGSGTAAARLDHLLPSHVEGKSSGDDLERLEKLAAFQ 360
           FLALDPKDPSLSKVRAILLDPSCSGSGTAAARLDHLLPSHVEGKSSGDDLERLEKLAAFQ
Sbjct: 301 FLALDPKDPSLSKVRAILLDPSCSGSGTAAARLDHLLPSHVEGKSSGDDLERLEKLAAFQ 360

Query: 361 RKALAHAFSFPAVERIVYSTCSVHQVENEDVVQSLLPLAESHGFQLETPFPQWQRRGHPV 420
           RKALAHAFSFPAVERIVYSTCSVHQVENEDVVQSLLPLAESHGFQLETPFPQWQRRGHPV
Sbjct: 361 RKALAHAFSFPAVERIVYSTCSVHQVENEDVVQSLLPLAESHGFQLETPFPQWQRRGHPV 420

Query: 421 FAGANHLLRTDPIEDTEGFFIALFKKQNTTHPFPQISSRDKSSRNHGGN 470
           FAGANHLLRTDPIEDTEGFFIALFKKQNTTHPFPQISSRDKSSRNHGGN
Sbjct: 421 FAGANHLLRTDPIEDTEGFFIALFKKQNTTHPFPQISSRDKSSRNHGGN 469

[Close]

BLAST of CmoCh09G003540 vs. ExPASy TrEMBL
Match: A0A6J1IIH7 (probable 28S rRNA (Cytosine-C(5))-methyltransferase OS=Cucurbita maxima OX=3661 GN=LOC111477204 PE=3 SV=1)

HSP 1 Score: 897.9 bits (2319), Expect = 2.1e-257
Identity = 458/469 (97.65%), Postives = 462/469 (98.51%), Query Frame = 0


Query: 1   MGRVNPRTKPSVAGTAGKSESRRMSNADRSAYFARREAAKILRRVLEGDAQRRAVASIKS 60
           MGRVNPRTKPSVAGTAGKSESRRMSNADRSAYFARREAAKILRRVLEGDA RRAVASIKS
Sbjct: 1   MGRVNPRTKPSVAGTAGKSESRRMSNADRSAYFARREAAKILRRVLEGDAHRRAVASIKS 60

Query: 61  LVYAPSVRNKKGTFALVCKTLKYLPIIKEVLEAADLLSNKWKRQKELIYVIMYDILLGQK 120
           LVYAPSVRNKKGTFALVCKTLKYLPIIKEVLEAADLLSNKWKRQKELIYVIMYDILLGQK
Sbjct: 61  LVYAPSVRNKKGTFALVCKTLKYLPIIKEVLEAADLLSNKWKRQKELIYVIMYDILLGQK 120

Query: 121 TPLAGDAEKFLMRQQSALQSVVTQLLSKRKANNIEDLIARGHNPGVSRPRFIRVNTLKMD 180
           TPLAGDAEKFLMRQQSALQSVVTQLLSKRKANNIEDLIARG NPGVSRPRFIRVNTLKMD
Sbjct: 121 TPLAGDAEKFLMRQQSALQSVVTQLLSKRKANNIEDLIARGDNPGVSRPRFIRVNTLKMD 180

Query: 181 VHTAIQELGKRYAVQKDDMVPDLLVLPPGSDLHDHPLVADGSIFMQGKASSMVAVALDPK 240
           VH AIQELGKRYAVQKDDMVPDLLVLPPGSDLHDHPLVADGSIFMQGKASSMVAVALDPK
Sbjct: 181 VHAAIQELGKRYAVQKDDMVPDLLVLPPGSDLHDHPLVADGSIFMQGKASSMVAVALDPK 240

Query: 241 PGWEVLDACSAPGNKTVHLASLMNGEGRIIACELNENRVKRLQHTIKLSGASNIEVLHGD 300
           PGWEVLDACSAPGNKTVHLASLMNG+GRIIACELNENRVKRLQHTI+LSGASNIEVLHGD
Sbjct: 241 PGWEVLDACSAPGNKTVHLASLMNGKGRIIACELNENRVKRLQHTIELSGASNIEVLHGD 300

Query: 301 FLALDPKDPSLSKVRAILLDPSCSGSGTAAARLDHLLPSHVEGKSSGDDLERLEKLAAFQ 360
           FLALDPKDPSLSKVRAILLDPSCSGSGTAAARLDHLLPSHVEGKSSGDD ERL+KLAAFQ
Sbjct: 301 FLALDPKDPSLSKVRAILLDPSCSGSGTAAARLDHLLPSHVEGKSSGDDHERLDKLAAFQ 360

Query: 361 RKALAHAFSFPAVERIVYSTCSVHQVENEDVVQSLLPLAESHGFQLETPFPQWQRRGHPV 420
           RKALAHAFSFPAVERIVYSTCS+HQVENEDVVQSLL LAESHGFQLETPFPQWQRRG PV
Sbjct: 361 RKALAHAFSFPAVERIVYSTCSIHQVENEDVVQSLLHLAESHGFQLETPFPQWQRRGLPV 420

Query: 421 FAGANHLLRTDPIEDTEGFFIALFKKQNTTHPFPQISSRDKSSRNHGGN 470
           FAGANHLLRTDPIED EGFFIALFKKQNTTHPFPQISSRDKSSRNHGGN
Sbjct: 421 FAGANHLLRTDPIEDKEGFFIALFKKQNTTHPFPQISSRDKSSRNHGGN 469

[Close]

BLAST of CmoCh09G003540 vs. ExPASy TrEMBL
Match: A0A6J1C0F2 (probable 28S rRNA (Cytosine-C(5))-methyltransferase OS=Momordica charantia OX=3673 GN=LOC111007201 PE=3 SV=1)

HSP 1 Score: 828.9 bits (2140), Expect = 1.2e-236
Identity = 425/471 (90.23%), Postives = 445/471 (94.48%), Query Frame = 0


Query: 1   MGRVNPRTKPSVAGTAGKSESRRMSNADRSAYFARREAAKILRRVLEGDAQRRAVASIKS 60
           MGRVN RT  S  GTAGKS+ RR+SNA RSAYFARREAAKILRRVLEGDAQRRAVASIKS
Sbjct: 1   MGRVNNRTNASAPGTAGKSDIRRLSNAARSAYFARREAAKILRRVLEGDAQRRAVASIKS 60

Query: 61  LVYAPSVRNKKGTFALVCKTLKYLPIIKEVLEAADLLSNKWKRQKELIYVIMYDILLGQK 120
           LVYAPSVRNKKGTFALVCKTLKYLP+IK+VLEAADLLSNKWKRQKELIYVIMYDILLGQK
Sbjct: 61  LVYAPSVRNKKGTFALVCKTLKYLPVIKDVLEAADLLSNKWKRQKELIYVIMYDILLGQK 120

Query: 121 TPLAGDAEKFLMRQQSALQSVVTQLLSKRKANNIEDLIARGHNPGVSRPRFIRVNTLKMD 180
            PLAGDAEKFLMRQQS LQSVVTQLLSKRKA++IEDLI RG NPGVSRPRFIRVNTLKMD
Sbjct: 121 APLAGDAEKFLMRQQSVLQSVVTQLLSKRKASSIEDLIVRGKNPGVSRPRFIRVNTLKMD 180

Query: 181 VHTAIQELGKRYAVQKDDMVPDLLVLPPGSDLHDHPLVADGSIFMQGKASSMVAVALDPK 240
           VH AI ELGKRYAV KDDMVPDLLVLPPGSDLHDHPLVA+GSIFMQGKASSMVAVALDPK
Sbjct: 181 VHAAISELGKRYAVHKDDMVPDLLVLPPGSDLHDHPLVANGSIFMQGKASSMVAVALDPK 240

Query: 241 PGWEVLDACSAPGNKTVHLASLMNGEGRIIACELNENRVKRLQHTIKLSGASNIEVLHGD 300
           PGWEVLDACSAPGNKTVHLASLMNG+GRIIACELNE+RV+RLQ TIKLSGASNI+VLHGD
Sbjct: 241 PGWEVLDACSAPGNKTVHLASLMNGKGRIIACELNEDRVRRLQDTIKLSGASNIQVLHGD 300

Query: 301 FLALDPKDPSLSKVRAILLDPSCSGSGTAAARLDHLLPSHVEGKSSGD-DLERLEKLAAF 360
           FL L+PKDPSLSKVRAILLDPSCSGSGTAAARLDHLLPSHVEGK+S D DLERL KLAAF
Sbjct: 301 FLNLNPKDPSLSKVRAILLDPSCSGSGTAAARLDHLLPSHVEGKTSEDVDLERLNKLAAF 360

Query: 361 QRKALAHAFSFPAVERIVYSTCSVHQVENEDVVQSLLPLAESHGFQLETPFPQWQRRGHP 420
           QRKALAHAFSFPAVERIVYSTCS+HQ+ENEDVVQS+LPLAESHGF+LETPFP+WQRRG P
Sbjct: 361 QRKALAHAFSFPAVERIVYSTCSIHQIENEDVVQSILPLAESHGFELETPFPRWQRRGLP 420

Query: 421 VFAGANHLLRTDPIEDTEGFFIALFK-KQNTTHPFPQISSRDKSSRNHGGN 470
           VF GANHLLRTDPIED EGFFIALFK KQ+TTH FPQ S+RDKSSRN GGN
Sbjct: 421 VFVGANHLLRTDPIEDKEGFFIALFKRKQDTTHSFPQTSNRDKSSRNRGGN 471

[Close]

BLAST of CmoCh09G003540 vs. ExPASy TrEMBL
Match: A0A0A0L2U2 (SAM_MT_RSMB_NOP domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_4G646330 PE=3 SV=1)

HSP 1 Score: 825.9 bits (2132), Expect = 1.0e-235
Identity = 418/471 (88.75%), Postives = 448/471 (95.12%), Query Frame = 0


Query: 1   MGRVNPRTKPSVAGTAGKSESRRMSNADRSAYFARREAAKILRRVLEGDAQRRAVASIKS 60
           MGRVN RTK S +G AGKSE RRMSNADRSAYFARREAAK+LRRVLEGDAQRRA+ASIK+
Sbjct: 26  MGRVNNRTKASASGAAGKSEMRRMSNADRSAYFARREAAKVLRRVLEGDAQRRAIASIKT 85

Query: 61  LVYAPSVRNKKGTFALVCKTLKYLPIIKEVLEAADLLSNKWKRQKELIYVIMYDILLGQK 120
           LVYAPSVRNKKGTFALVCKTLKYLP+IK+V+EAADLLSNKWKRQKELIYVIMYDILLGQK
Sbjct: 86  LVYAPSVRNKKGTFALVCKTLKYLPVIKDVVEAADLLSNKWKRQKELIYVIMYDILLGQK 145

Query: 121 TPLAGDAEKFLMRQQSALQSVVTQLLSKRKANNIEDLIARGHN-PGVSRPRFIRVNTLKM 180
           T LAGDAEKFLMRQQSALQS VTQLLSK+KANNIEDLIARG + PGVSRPRF+RVNTLKM
Sbjct: 146 THLAGDAEKFLMRQQSALQSAVTQLLSKKKANNIEDLIARGDDGPGVSRPRFVRVNTLKM 205

Query: 181 DVHTAIQELGKRYAVQKDDMVPDLLVLPPGSDLHDHPLVADGSIFMQGKASSMVAVALDP 240
           DVHTAI+ELGKRYAVQKDDMV DLL+LPPGSDLHDHPLVADGSIF+QGKASSMVAVALDP
Sbjct: 206 DVHTAIEELGKRYAVQKDDMVSDLLILPPGSDLHDHPLVADGSIFLQGKASSMVAVALDP 265

Query: 241 KPGWEVLDACSAPGNKTVHLASLMNGEGRIIACELNENRVKRLQHTIKLSGASNIEVLHG 300
           KPGWEVLDACSAPGNKTVHLASLM+G+GR+IACELNENRVKRL+HTIKLSGASNI+VLHG
Sbjct: 266 KPGWEVLDACSAPGNKTVHLASLMHGKGRVIACELNENRVKRLRHTIKLSGASNIDVLHG 325

Query: 301 DFLALDPKDPSLSKVRAILLDPSCSGSGTAAARLDHLLPSHVEGKSSGDDLERLEKLAAF 360
           DFL L+PKDPSLSKVRAILLDPSCSGSGTAA RLDHLLPSH EG  SGDDLERL KLAAF
Sbjct: 326 DFLNLNPKDPSLSKVRAILLDPSCSGSGTAAVRLDHLLPSHAEGTISGDDLERLNKLAAF 385

Query: 361 QRKALAHAFSFPAVERIVYSTCSVHQVENEDVVQSLLPLAESHGFQLETPFPQWQRRGHP 420
           QRKALAHAFSFPAVE+IVYSTCS+HQ+ENEDVVQS+LPLAES GFQL+TPFP+WQRRG P
Sbjct: 386 QRKALAHAFSFPAVEKIVYSTCSIHQIENEDVVQSVLPLAESRGFQLDTPFPRWQRRGLP 445

Query: 421 VFAGANHLLRTDPIEDTEGFFIALF-KKQNTTHPFPQISSRDKSSRNHGGN 470
           VFAGANHLLRTDP+ED EGFFIALF KKQNTT+PFP+ S+RDKSSR  GG+
Sbjct: 446 VFAGANHLLRTDPVEDKEGFFIALFKKKQNTTNPFPRSSNRDKSSRYRGGD 496

[Close]

BLAST of CmoCh09G003540 vs. ExPASy TrEMBL
Match: A0A5D3D9A2 (Putative 28S rRNA (Cytosine-C(5))-methyltransferase isoform X1 OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold134G001930 PE=3 SV=1)

HSP 1 Score: 815.8 bits (2106), Expect = 1.1e-232
Identity = 429/518 (82.82%), Postives = 463/518 (89.38%), Query Frame = 0


Query: 1   MGRVNPRTKPSVAGTAGKSESRRMSNADRSAYFARREAAKILRRVLEGDAQRRAVASIKS 60
           MGRVN RTK S +  A KSE+R+MSNADRSAYFARREAAKILRRVLEGDAQRRA+ASIKS
Sbjct: 1   MGRVNNRTKVSPSRAAYKSENRKMSNADRSAYFARREAAKILRRVLEGDAQRRAIASIKS 60

Query: 61  LVYAPSVRNKKGTFALVCKTLKYLPIIKEVLEAADLLSNKWKRQKELIYVIMYDILLGQK 120
           LVYAPSVRNKKGTFALVCKTLKYLP+IK+VLEAADLLSNKWKRQKELIYVIMYDILLGQK
Sbjct: 61  LVYAPSVRNKKGTFALVCKTLKYLPVIKDVLEAADLLSNKWKRQKELIYVIMYDILLGQK 120

Query: 121 TPLAGDAEKFLMRQQSALQSVVTQLLSKRKANNIEDLIARG-HNPGVSRPRFIRVNTLKM 180
             LAGDAEKFLMRQQSALQS VTQLLSK+KANNIEDLI RG  +PGVSRPRFIRVNTLKM
Sbjct: 121 AHLAGDAEKFLMRQQSALQSAVTQLLSKKKANNIEDLITRGDDDPGVSRPRFIRVNTLKM 180

Query: 181 DVHTAIQELGKRYAVQKDDMVPDLLVLPPGSDLHDHPLVADGSIFMQGKASSMVAVALDP 240
           DVHTAI+ELGKRY V KDDMVPDLL+LPPGSDLHDHPLVADGSIF+QGKASSMVAVALDP
Sbjct: 181 DVHTAIEELGKRYPVLKDDMVPDLLILPPGSDLHDHPLVADGSIFLQGKASSMVAVALDP 240

Query: 241 KPGWEVLDACSAPGNKTVHLASLMNGEGRIIACELNENRVKRLQHTIKLSGASNIEVLHG 300
           KPGWEVLDACSAPGNKTVHLASLMNG+GR+IACELNE+RVKRLQHTIKLSGAS I+VLHG
Sbjct: 241 KPGWEVLDACSAPGNKTVHLASLMNGKGRVIACELNESRVKRLQHTIKLSGASIIDVLHG 300

Query: 301 DFLALDPKDPSLSKVRAILLDPSCSGSGTAAARLDHLLPSHVEGKSSGDDLERLEKLAAF 360
           DFL L PKDPSLSKVRAILLDPSCSGSGTAA RLDHLLPSHVEG +SGDDLERL KLAAF
Sbjct: 301 DFLNLSPKDPSLSKVRAILLDPSCSGSGTAAVRLDHLLPSHVEGTTSGDDLERLNKLAAF 360

Query: 361 QRKALAHAFSFPAVERIVYSTCSVHQVENEDVVQSLLPLAESHGFQLETPFPQWQRRGHP 420
           QRKALAHAFSFPAVERIVYSTCS+HQ+ENEDVVQSLLPLAESHGFQL+TPFPQWQRRG P
Sbjct: 361 QRKALAHAFSFPAVERIVYSTCSIHQIENEDVVQSLLPLAESHGFQLDTPFPQWQRRGLP 420

Query: 421 VFAGANHLLRTDPIEDTEGFFIALF-KKQNTTHPFPQISSRDKSSRNHGGNDTTEKNPHS 480
           VFAGANHLLRTDP+ED EGFFIALF KKQNTT+PFP+  + DKSSR   G+         
Sbjct: 421 VFAGANHLLRTDPVEDKEGFFIALFKKKQNTTNPFPRSLNIDKSSRYRSGD--------- 480

Query: 481 IQNQNKILIILKTEHSKIFKVSTFLLSTHYRGNPHISV 517
           ++N N+ L    T+ SK+ ++  + LST  R   + S+
Sbjct: 481 VRN-NRALACPPTKISKL-RLYQYALSTRTRWRKNHSI 507

[Close]

BLAST of CmoCh09G003540 vs. NCBI nr
Match: XP_022936709.1 (probable 28S rRNA (cytosine-C(5))-methyltransferase [Cucurbita moschata])

HSP 1 Score: 922.5 bits (2383), Expect = 1.7e-264
Identity = 469/469 (100.00%), Postives = 469/469 (100.00%), Query Frame = 0


Query: 1   MGRVNPRTKPSVAGTAGKSESRRMSNADRSAYFARREAAKILRRVLEGDAQRRAVASIKS 60
           MGRVNPRTKPSVAGTAGKSESRRMSNADRSAYFARREAAKILRRVLEGDAQRRAVASIKS
Sbjct: 1   MGRVNPRTKPSVAGTAGKSESRRMSNADRSAYFARREAAKILRRVLEGDAQRRAVASIKS 60

Query: 61  LVYAPSVRNKKGTFALVCKTLKYLPIIKEVLEAADLLSNKWKRQKELIYVIMYDILLGQK 120
           LVYAPSVRNKKGTFALVCKTLKYLPIIKEVLEAADLLSNKWKRQKELIYVIMYDILLGQK
Sbjct: 61  LVYAPSVRNKKGTFALVCKTLKYLPIIKEVLEAADLLSNKWKRQKELIYVIMYDILLGQK 120

Query: 121 TPLAGDAEKFLMRQQSALQSVVTQLLSKRKANNIEDLIARGHNPGVSRPRFIRVNTLKMD 180
           TPLAGDAEKFLMRQQSALQSVVTQLLSKRKANNIEDLIARGHNPGVSRPRFIRVNTLKMD
Sbjct: 121 TPLAGDAEKFLMRQQSALQSVVTQLLSKRKANNIEDLIARGHNPGVSRPRFIRVNTLKMD 180

Query: 181 VHTAIQELGKRYAVQKDDMVPDLLVLPPGSDLHDHPLVADGSIFMQGKASSMVAVALDPK 240
           VHTAIQELGKRYAVQKDDMVPDLLVLPPGSDLHDHPLVADGSIFMQGKASSMVAVALDPK
Sbjct: 181 VHTAIQELGKRYAVQKDDMVPDLLVLPPGSDLHDHPLVADGSIFMQGKASSMVAVALDPK 240

Query: 241 PGWEVLDACSAPGNKTVHLASLMNGEGRIIACELNENRVKRLQHTIKLSGASNIEVLHGD 300
           PGWEVLDACSAPGNKTVHLASLMNGEGRIIACELNENRVKRLQHTIKLSGASNIEVLHGD
Sbjct: 241 PGWEVLDACSAPGNKTVHLASLMNGEGRIIACELNENRVKRLQHTIKLSGASNIEVLHGD 300

Query: 301 FLALDPKDPSLSKVRAILLDPSCSGSGTAAARLDHLLPSHVEGKSSGDDLERLEKLAAFQ 360
           FLALDPKDPSLSKVRAILLDPSCSGSGTAAARLDHLLPSHVEGKSSGDDLERLEKLAAFQ
Sbjct: 301 FLALDPKDPSLSKVRAILLDPSCSGSGTAAARLDHLLPSHVEGKSSGDDLERLEKLAAFQ 360

Query: 361 RKALAHAFSFPAVERIVYSTCSVHQVENEDVVQSLLPLAESHGFQLETPFPQWQRRGHPV 420
           RKALAHAFSFPAVERIVYSTCSVHQVENEDVVQSLLPLAESHGFQLETPFPQWQRRGHPV
Sbjct: 361 RKALAHAFSFPAVERIVYSTCSVHQVENEDVVQSLLPLAESHGFQLETPFPQWQRRGHPV 420

Query: 421 FAGANHLLRTDPIEDTEGFFIALFKKQNTTHPFPQISSRDKSSRNHGGN 470
           FAGANHLLRTDPIEDTEGFFIALFKKQNTTHPFPQISSRDKSSRNHGGN
Sbjct: 421 FAGANHLLRTDPIEDTEGFFIALFKKQNTTHPFPQISSRDKSSRNHGGN 469

[Close]

BLAST of CmoCh09G003540 vs. NCBI nr
Match: XP_023535594.1 (probable 28S rRNA (cytosine-C(5))-methyltransferase [Cucurbita pepo subsp. pepo])

HSP 1 Score: 906.7 bits (2342), Expect = 9.4e-260
Identity = 462/469 (98.51%), Postives = 464/469 (98.93%), Query Frame = 0


Query: 1   MGRVNPRTKPSVAGTAGKSESRRMSNADRSAYFARREAAKILRRVLEGDAQRRAVASIKS 60
           MGRVNPRTKPSVAGTAGKSESRRMSNADRSAYFARREAAKILRRVLEGDA RRAVASIKS
Sbjct: 1   MGRVNPRTKPSVAGTAGKSESRRMSNADRSAYFARREAAKILRRVLEGDAHRRAVASIKS 60

Query: 61  LVYAPSVRNKKGTFALVCKTLKYLPIIKEVLEAADLLSNKWKRQKELIYVIMYDILLGQK 120
           LVYAPSVRNKKGTFALVCKTLKYLP+IKEVLEAADLLSNKWKRQKELIYVIMYDILLGQK
Sbjct: 61  LVYAPSVRNKKGTFALVCKTLKYLPVIKEVLEAADLLSNKWKRQKELIYVIMYDILLGQK 120

Query: 121 TPLAGDAEKFLMRQQSALQSVVTQLLSKRKANNIEDLIARGHNPGVSRPRFIRVNTLKMD 180
           TPLAGDAEKFLMRQQSALQSVVTQLLSKRKANNIEDLIARG NPGVSRPRFIRVNTLKMD
Sbjct: 121 TPLAGDAEKFLMRQQSALQSVVTQLLSKRKANNIEDLIARGDNPGVSRPRFIRVNTLKMD 180

Query: 181 VHTAIQELGKRYAVQKDDMVPDLLVLPPGSDLHDHPLVADGSIFMQGKASSMVAVALDPK 240
           VHTAIQELGKRYAVQKDDMVPDLLVLPPGSDLHDHPLVADGSIFMQGKASSMVAVALDPK
Sbjct: 181 VHTAIQELGKRYAVQKDDMVPDLLVLPPGSDLHDHPLVADGSIFMQGKASSMVAVALDPK 240

Query: 241 PGWEVLDACSAPGNKTVHLASLMNGEGRIIACELNENRVKRLQHTIKLSGASNIEVLHGD 300
           PGWEVLDACSAPGNKTVHLASLMNG+GRIIACELNENRVKRLQHTIKLSGASNIEVLHGD
Sbjct: 241 PGWEVLDACSAPGNKTVHLASLMNGKGRIIACELNENRVKRLQHTIKLSGASNIEVLHGD 300

Query: 301 FLALDPKDPSLSKVRAILLDPSCSGSGTAAARLDHLLPSHVEGKSSGDDLERLEKLAAFQ 360
           FLALDPKDPSLSKVRAILLDPSCSGSGTAAARLDHLLPSHVEGKSSGDDLERLEKLAAFQ
Sbjct: 301 FLALDPKDPSLSKVRAILLDPSCSGSGTAAARLDHLLPSHVEGKSSGDDLERLEKLAAFQ 360

Query: 361 RKALAHAFSFPAVERIVYSTCSVHQVENEDVVQSLLPLAESHGFQLETPFPQWQRRGHPV 420
           RKALAHAFSFPAVERIVYSTCSVHQVENEDVV SLLPLAESHGFQLETPFPQWQRRG PV
Sbjct: 361 RKALAHAFSFPAVERIVYSTCSVHQVENEDVVHSLLPLAESHGFQLETPFPQWQRRGLPV 420

Query: 421 FAGANHLLRTDPIEDTEGFFIALFKKQNTTHPFPQISSRDKSSRNHGGN 470
           FAGANHLLRTDPIED EGFFIALFKKQNTTHPFPQISSRDKSSRNHGGN
Sbjct: 421 FAGANHLLRTDPIEDKEGFFIALFKKQNTTHPFPQISSRDKSSRNHGGN 469

[Close]

BLAST of CmoCh09G003540 vs. NCBI nr
Match: KAG6591478.1 (25S rRNA (cytosine-C(5))-methyltransferase NSUN5, partial [Cucurbita argyrosperma subsp. sororia])

HSP 1 Score: 900.2 bits (2325), Expect = 8.8e-258
Identity = 456/469 (97.23%), Postives = 463/469 (98.72%), Query Frame = 0


Query: 1   MGRVNPRTKPSVAGTAGKSESRRMSNADRSAYFARREAAKILRRVLEGDAQRRAVASIKS 60
           MGRVNPRTKPSVAGTAGKSESRRMSNADRSAYFARREAA+ILRRVLEGDA RRAVASIKS
Sbjct: 1   MGRVNPRTKPSVAGTAGKSESRRMSNADRSAYFARREAARILRRVLEGDAHRRAVASIKS 60

Query: 61  LVYAPSVRNKKGTFALVCKTLKYLPIIKEVLEAADLLSNKWKRQKELIYVIMYDILLGQK 120
           LVYAPSVRNKKGTFALVCKTLKYLP+IKEVLEAADLLSNKWKRQKELIY+IMYDILLGQK
Sbjct: 61  LVYAPSVRNKKGTFALVCKTLKYLPVIKEVLEAADLLSNKWKRQKELIYIIMYDILLGQK 120

Query: 121 TPLAGDAEKFLMRQQSALQSVVTQLLSKRKANNIEDLIARGHNPGVSRPRFIRVNTLKMD 180
           TPLAGDAEKFLMRQQSALQSVVTQLLSKRKANNIEDLIARG NPGVSRPRFIRVNTLKMD
Sbjct: 121 TPLAGDAEKFLMRQQSALQSVVTQLLSKRKANNIEDLIARGDNPGVSRPRFIRVNTLKMD 180

Query: 181 VHTAIQELGKRYAVQKDDMVPDLLVLPPGSDLHDHPLVADGSIFMQGKASSMVAVALDPK 240
           VHTAIQELGKRYAVQKDDMVPDLLVLPPGSDLHDHPLVADGSIFMQGKASSMVAVALDPK
Sbjct: 181 VHTAIQELGKRYAVQKDDMVPDLLVLPPGSDLHDHPLVADGSIFMQGKASSMVAVALDPK 240

Query: 241 PGWEVLDACSAPGNKTVHLASLMNGEGRIIACELNENRVKRLQHTIKLSGASNIEVLHGD 300
           PGWEVLDACSAPGNKTVHLASLMNG+GRIIACELNENRVKRLQHTIKLSGASNIEVLHGD
Sbjct: 241 PGWEVLDACSAPGNKTVHLASLMNGKGRIIACELNENRVKRLQHTIKLSGASNIEVLHGD 300

Query: 301 FLALDPKDPSLSKVRAILLDPSCSGSGTAAARLDHLLPSHVEGKSSGDDLERLEKLAAFQ 360
           FLALDPKDPSLSKVRAILLDPSCSGSGTAAARLDHLLPSHVEGKSSGDD ERL+KLAAFQ
Sbjct: 301 FLALDPKDPSLSKVRAILLDPSCSGSGTAAARLDHLLPSHVEGKSSGDDHERLDKLAAFQ 360

Query: 361 RKALAHAFSFPAVERIVYSTCSVHQVENEDVVQSLLPLAESHGFQLETPFPQWQRRGHPV 420
           RKALAHAFSFPAVERIVYSTCSVHQVENEDVV SLLPLAESHGFQLETPFP WQRRGHPV
Sbjct: 361 RKALAHAFSFPAVERIVYSTCSVHQVENEDVVHSLLPLAESHGFQLETPFPHWQRRGHPV 420

Query: 421 FAGANHLLRTDPIEDTEGFFIALFKKQNTTHPFPQISSRDKSSRNHGGN 470
           FAGANHLLRTDP+ED EGFFIALFKKQNTTHPFPQISSRDKSSRN+GGN
Sbjct: 421 FAGANHLLRTDPLEDKEGFFIALFKKQNTTHPFPQISSRDKSSRNNGGN 469

[Close]

BLAST of CmoCh09G003540 vs. NCBI nr
Match: XP_022977006.1 (probable 28S rRNA (cytosine-C(5))-methyltransferase [Cucurbita maxima])

HSP 1 Score: 897.9 bits (2319), Expect = 4.4e-257
Identity = 458/469 (97.65%), Postives = 462/469 (98.51%), Query Frame = 0


Query: 1   MGRVNPRTKPSVAGTAGKSESRRMSNADRSAYFARREAAKILRRVLEGDAQRRAVASIKS 60
           MGRVNPRTKPSVAGTAGKSESRRMSNADRSAYFARREAAKILRRVLEGDA RRAVASIKS
Sbjct: 1   MGRVNPRTKPSVAGTAGKSESRRMSNADRSAYFARREAAKILRRVLEGDAHRRAVASIKS 60

Query: 61  LVYAPSVRNKKGTFALVCKTLKYLPIIKEVLEAADLLSNKWKRQKELIYVIMYDILLGQK 120
           LVYAPSVRNKKGTFALVCKTLKYLPIIKEVLEAADLLSNKWKRQKELIYVIMYDILLGQK
Sbjct: 61  LVYAPSVRNKKGTFALVCKTLKYLPIIKEVLEAADLLSNKWKRQKELIYVIMYDILLGQK 120

Query: 121 TPLAGDAEKFLMRQQSALQSVVTQLLSKRKANNIEDLIARGHNPGVSRPRFIRVNTLKMD 180
           TPLAGDAEKFLMRQQSALQSVVTQLLSKRKANNIEDLIARG NPGVSRPRFIRVNTLKMD
Sbjct: 121 TPLAGDAEKFLMRQQSALQSVVTQLLSKRKANNIEDLIARGDNPGVSRPRFIRVNTLKMD 180

Query: 181 VHTAIQELGKRYAVQKDDMVPDLLVLPPGSDLHDHPLVADGSIFMQGKASSMVAVALDPK 240
           VH AIQELGKRYAVQKDDMVPDLLVLPPGSDLHDHPLVADGSIFMQGKASSMVAVALDPK
Sbjct: 181 VHAAIQELGKRYAVQKDDMVPDLLVLPPGSDLHDHPLVADGSIFMQGKASSMVAVALDPK 240

Query: 241 PGWEVLDACSAPGNKTVHLASLMNGEGRIIACELNENRVKRLQHTIKLSGASNIEVLHGD 300
           PGWEVLDACSAPGNKTVHLASLMNG+GRIIACELNENRVKRLQHTI+LSGASNIEVLHGD
Sbjct: 241 PGWEVLDACSAPGNKTVHLASLMNGKGRIIACELNENRVKRLQHTIELSGASNIEVLHGD 300

Query: 301 FLALDPKDPSLSKVRAILLDPSCSGSGTAAARLDHLLPSHVEGKSSGDDLERLEKLAAFQ 360
           FLALDPKDPSLSKVRAILLDPSCSGSGTAAARLDHLLPSHVEGKSSGDD ERL+KLAAFQ
Sbjct: 301 FLALDPKDPSLSKVRAILLDPSCSGSGTAAARLDHLLPSHVEGKSSGDDHERLDKLAAFQ 360

Query: 361 RKALAHAFSFPAVERIVYSTCSVHQVENEDVVQSLLPLAESHGFQLETPFPQWQRRGHPV 420
           RKALAHAFSFPAVERIVYSTCS+HQVENEDVVQSLL LAESHGFQLETPFPQWQRRG PV
Sbjct: 361 RKALAHAFSFPAVERIVYSTCSIHQVENEDVVQSLLHLAESHGFQLETPFPQWQRRGLPV 420

Query: 421 FAGANHLLRTDPIEDTEGFFIALFKKQNTTHPFPQISSRDKSSRNHGGN 470
           FAGANHLLRTDPIED EGFFIALFKKQNTTHPFPQISSRDKSSRNHGGN
Sbjct: 421 FAGANHLLRTDPIEDKEGFFIALFKKQNTTHPFPQISSRDKSSRNHGGN 469

[Close]

BLAST of CmoCh09G003540 vs. NCBI nr
Match: KAG7024362.1 (putative 28S rRNA (cytosine-C(5))-methyltransferase, partial [Cucurbita argyrosperma subsp. argyrosperma])

HSP 1 Score: 873.2 bits (2255), Expect = 1.2e-249
Identity = 454/497 (91.35%), Postives = 460/497 (92.56%), Query Frame = 0


Query: 1   MGRVNPRTKPSVAGTAGKSESRRMSNADRSAYFARREAAKILRRVLEGDAQRRAVASIKS 60
           MGRVNPRTKPSVAGTAGKSESRRMSNADRSAYFARREAAKILRRVLEGDA RRAVASIKS
Sbjct: 1   MGRVNPRTKPSVAGTAGKSESRRMSNADRSAYFARREAAKILRRVLEGDAHRRAVASIKS 60

Query: 61  LVYAPSVRNKKGTFALVCKTLKYLPIIKEVLEAADLLSNKWKRQKELIYVIMYDILLGQK 120
           LVYAPSVRNKKGTFALVCKTLKYLP+IKEVLEAADLLSNKWKRQKELIYVIMYDILLGQK
Sbjct: 61  LVYAPSVRNKKGTFALVCKTLKYLPVIKEVLEAADLLSNKWKRQKELIYVIMYDILLGQK 120

Query: 121 TPLAGDAEKFLMRQQSALQSVVTQLLSKRKANNIEDLIARGHNPGVSRPRFIRVNTLKMD 180
           TPLAGDAEKFLMRQQSALQSVVTQLLSKRKANNIEDLIARG NPGVSRPRFIRVNTLKMD
Sbjct: 121 TPLAGDAEKFLMRQQSALQSVVTQLLSKRKANNIEDLIARGDNPGVSRPRFIRVNTLKMD 180

Query: 181 VHTAIQELGKRYAVQKDDMVPDLLVLPPGSDLHDHPLVADGSIFMQGKASSMVAVALDPK 240
           VHTAIQELGKRYAVQKDDMVPDLLVLPPGSDLHDHPLVADGSIFMQGKASSMVAVALDPK
Sbjct: 181 VHTAIQELGKRYAVQKDDMVPDLLVLPPGSDLHDHPLVADGSIFMQGKASSMVAVALDPK 240

Query: 241 PGWEVLDACSAPGNKTVHLASLMNGEGRIIACELNENRVKRLQHTIKLSGASNIEVLHGD 300
           PGWEVLDACSAPGNKTVHLASLMNG+GRIIACELNENRVKRLQHTIKLSGAS  +VLHGD
Sbjct: 241 PGWEVLDACSAPGNKTVHLASLMNGKGRIIACELNENRVKRLQHTIKLSGAS--KVLHGD 300

Query: 301 FLALDPKDPSLSK----------------------------VRAILLDPSCSGSGTAAAR 360
           FLALDPKDPSLSK                            VRAILLDPSCSGSGTAA R
Sbjct: 301 FLALDPKDPSLSKVSSAPIRTDHLLFSYHPPVLLNGGFSDVVRAILLDPSCSGSGTAAVR 360

Query: 361 LDHLLPSHVEGKSSGDDLERLEKLAAFQRKALAHAFSFPAVERIVYSTCSVHQVENEDVV 420
           LDHLLPSHVEGKSSGDD ERL+KLAAFQRKALAHAFSFPAVERIVYSTCSVHQVENEDVV
Sbjct: 361 LDHLLPSHVEGKSSGDDHERLDKLAAFQRKALAHAFSFPAVERIVYSTCSVHQVENEDVV 420

Query: 421 QSLLPLAESHGFQLETPFPQWQRRGHPVFAGANHLLRTDPIEDTEGFFIALFKKQNTTHP 470
            SLLPLAESHGFQLETPFPQWQRRGHPVFAGANHLLRTDP+ED EGFFIALFKKQNTTHP
Sbjct: 421 HSLLPLAESHGFQLETPFPQWQRRGHPVFAGANHLLRTDPLEDKEGFFIALFKKQNTTHP 480

[Close]

BLAST of CmoCh09G003540 vs. TAIR 10
Match: AT5G26180.1 (S-adenosyl-L-methionine-dependent methyltransferases superfamily protein )

HSP 1 Score: 594.7 bits (1532), Expect = 7.4e-170
Identity = 302/472 (63.98%), Postives = 367/472 (77.75%), Query Frame = 0


Query: 6   PRTKPSVAGTAGKSESRRMSNADRSAYFARREAAKILRRVLEGDAQRRAVASIKSLVYAP 65
           P+T P+          ++ S+ +RSA +ARREAA ILR VL GDA+RRAVASIKSLV +P
Sbjct: 78  PKTPPAT--------KQKFSSLERSALYARREAANILRTVLRGDAERRAVASIKSLVLSP 137

Query: 66  SVRNKKGTFALVCKTLKYLPIIKEVLEAADLLSNKWKRQKELIYVIMYDILLGQKTPLAG 125
           SVRNK+GTFALVC+TLKYL +IK+VL+ A++L++KWKRQ+ L++++ YDIL G+ TP  G
Sbjct: 138 SVRNKRGTFALVCETLKYLTVIKDVLDIANVLNSKWKRQEPLVFIVCYDILFGKDTPSIG 197

Query: 126 DAEKFLMRQQSALQSVVTQLLSKRKANNIEDLIARGHNPGVSRPRFIRVNTLKMDVHTAI 185
           DAEKFLMR + AL S +  LL ++K ++++ L+      G  +PR++RVNTLKMDV +A+
Sbjct: 198 DAEKFLMRHKEALLSGLATLLVRKKVDSVDQLLG-SKLTGHLKPRYVRVNTLKMDVDSAV 257

Query: 186 QELGKRYAVQKDDMVPDLLVLPPGSDLHDHPLVADGSIFMQGKASSMVAVALDPKPGWEV 245
           QEL K Y VQKD+ VPDLLVLPPGSDLH H LVA+G IF+QGKASSMVA AL P+ GWEV
Sbjct: 258 QELEKHYTVQKDETVPDLLVLPPGSDLHAHRLVANGRIFLQGKASSMVAAALQPQAGWEV 317

Query: 246 LDACSAPGNKTVHLASLMNGEGRIIACELNENRVKRLQHTIKLSGASNIEVLHGDFLALD 305
           LDACSAPGNKT+HLA+LM G+G+IIACELNE RVKRL+HTIKLSGASNIEV HGDFL L+
Sbjct: 318 LDACSAPGNKTIHLAALMEGQGKIIACELNEERVKRLEHTIKLSGASNIEVCHGDFLGLN 377

Query: 306 PKDPSLSKVRAILLDPSCSGSGTAAARLDHLLPSHVEGKSSGDDLERLEKLAAFQRKALA 365
           PKDPS +K+RAILLDPSCSGSGT   RLDHLLPSH E  +   D  RL KLA FQ+KALA
Sbjct: 378 PKDPSFAKIRAILLDPSCSGSGTITDRLDHLLPSHSEDNNMNYDSMRLHKLAVFQKKALA 437

Query: 366 HAFSFPAVERIVYSTCSVHQVENEDVVQSLLPLAESHGFQLETPFPQWQRRGHPVFAGAN 425
           HA SFP VER+VYSTCS++Q+ENEDVV S+LPLA S GF+L TPFPQWQRRG PVFAG+ 
Sbjct: 438 HALSFPKVERVVYSTCSIYQIENEDVVSSVLPLASSLGFKLATPFPQWQRRGLPVFAGSE 497

Query: 426 HLLRTDPIEDTEGFFIALFKKQNTTHPFPQISSRDKSSRNHGGNDTTEKNPH 478
           HLLR DP+ED EGFFIALF + N           D+  R      T + +P+
Sbjct: 498 HLLRMDPVEDKEGFFIALFVRANKLDNPKSSELPDRVCRRRPKERTMQLHPY 540

[Close]

BLAST of CmoCh09G003540 vs. TAIR 10
Match: AT5G26180.2 (S-adenosyl-L-methionine-dependent methyltransferases superfamily protein )

HSP 1 Score: 594.7 bits (1532), Expect = 7.4e-170
Identity = 302/472 (63.98%), Postives = 367/472 (77.75%), Query Frame = 0


Query: 6   PRTKPSVAGTAGKSESRRMSNADRSAYFARREAAKILRRVLEGDAQRRAVASIKSLVYAP 65
           P+T P+          ++ S+ +RSA +ARREAA ILR VL GDA+RRAVASIKSLV +P
Sbjct: 78  PKTPPAT--------KQKFSSLERSALYARREAANILRTVLRGDAERRAVASIKSLVLSP 137

Query: 66  SVRNKKGTFALVCKTLKYLPIIKEVLEAADLLSNKWKRQKELIYVIMYDILLGQKTPLAG 125
           SVRNK+GTFALVC+TLKYL +IK+VL+ A++L++KWKRQ+ L++++ YDIL G+ TP  G
Sbjct: 138 SVRNKRGTFALVCETLKYLTVIKDVLDIANVLNSKWKRQEPLVFIVCYDILFGKDTPSIG 197

Query: 126 DAEKFLMRQQSALQSVVTQLLSKRKANNIEDLIARGHNPGVSRPRFIRVNTLKMDVHTAI 185
           DAEKFLMR + AL S +  LL ++K ++++ L+      G  +PR++RVNTLKMDV +A+
Sbjct: 198 DAEKFLMRHKEALLSGLATLLVRKKVDSVDQLLG-SKLTGHLKPRYVRVNTLKMDVDSAV 257

Query: 186 QELGKRYAVQKDDMVPDLLVLPPGSDLHDHPLVADGSIFMQGKASSMVAVALDPKPGWEV 245
           QEL K Y VQKD+ VPDLLVLPPGSDLH H LVA+G IF+QGKASSMVA AL P+ GWEV
Sbjct: 258 QELEKHYTVQKDETVPDLLVLPPGSDLHAHRLVANGRIFLQGKASSMVAAALQPQAGWEV 317

Query: 246 LDACSAPGNKTVHLASLMNGEGRIIACELNENRVKRLQHTIKLSGASNIEVLHGDFLALD 305
           LDACSAPGNKT+HLA+LM G+G+IIACELNE RVKRL+HTIKLSGASNIEV HGDFL L+
Sbjct: 318 LDACSAPGNKTIHLAALMEGQGKIIACELNEERVKRLEHTIKLSGASNIEVCHGDFLGLN 377

Query: 306 PKDPSLSKVRAILLDPSCSGSGTAAARLDHLLPSHVEGKSSGDDLERLEKLAAFQRKALA 365
           PKDPS +K+RAILLDPSCSGSGT   RLDHLLPSH E  +   D  RL KLA FQ+KALA
Sbjct: 378 PKDPSFAKIRAILLDPSCSGSGTITDRLDHLLPSHSEDNNMNYDSMRLHKLAVFQKKALA 437

Query: 366 HAFSFPAVERIVYSTCSVHQVENEDVVQSLLPLAESHGFQLETPFPQWQRRGHPVFAGAN 425
           HA SFP VER+VYSTCS++Q+ENEDVV S+LPLA S GF+L TPFPQWQRRG PVFAG+ 
Sbjct: 438 HALSFPKVERVVYSTCSIYQIENEDVVSSVLPLASSLGFKLATPFPQWQRRGLPVFAGSE 497

Query: 426 HLLRTDPIEDTEGFFIALFKKQNTTHPFPQISSRDKSSRNHGGNDTTEKNPH 478
           HLLR DP+ED EGFFIALF + N           D+  R      T + +P+
Sbjct: 498 HLLRMDPVEDKEGFFIALFVRANKLDNPKSSELPDRVCRRRPKERTMQLHPY 540

[Close]

BLAST of CmoCh09G003540 vs. TAIR 10
Match: AT3G13180.1 (NOL1/NOP2/sun family protein / antitermination NusB domain-containing protein )

HSP 1 Score: 83.2 bits (204), Expect = 7.2e-16
Identity = 54/181 (29.83%), Postives = 90/181 (49.72%), Query Frame = 0


Query: 217 LVADGSIFMQGKASSMVAVALDPKPGWEVLDACSAPGNKTVHLASLMNGEGRIIACELNE 276
           L+ +G   +Q +++ ++   + P+PG  ++DAC+APG KT+ +AS + G+G I A ++NE
Sbjct: 306 LLKEGICSVQDESAGLIVSVVKPQPGERIMDACAAPGGKTLFMASCLKGQGMIYAMDVNE 365

Query: 277 NRVKRLQHTIKLSGASN-IEVLHGDFLALDPKDPSLSKVRAILLDPSCSGSGTAAARLDH 336
            R++ L  T K       I  +H D       + +  +   +LLD  CSG G  + R D 
Sbjct: 366 GRLRILGETAKSHQVDGLITTIHSDLRVF--AETNEVQYDKVLLDAPCSGLGVLSKRAD- 425

Query: 337 LLPSHVEGKSSGDDLERLEKLAAFQRKALAHAFSFPAVERIVYSTCSVHQVENEDVVQSL 396
                +      +D+  L KL      + +       V  +VYSTCS+   ENE  V++ 
Sbjct: 426 -----LRWNRKLEDMLELTKLQDELLDSASKLVKHGGV--LVYSTCSIDPEENEGRVEAF 476

[Close]

BLAST of CmoCh09G003540 vs. TAIR 10
Match: AT1G06560.1 (NOL1/NOP2/sun family protein )

HSP 1 Score: 66.6 bits (161), Expect = 7.0e-11
Identity = 31/67 (46.27%), Postives = 45/67 (67.16%), Query Frame = 0


Query: 218 VADGSIFMQGKASSMVAVALDPKPGWEVLDACSAPGNKTVHLASLMNGEGRIIACELNEN 277
           + +G IF+Q   S +VA ALDP+ G  +LD C+APG KT  +A LMN EG I+A + + N
Sbjct: 273 ILEGEIFLQNLPSIIVAHALDPQKGERILDMCAAPGGKTTAIAILMNDEGEIVAADRSHN 332

Query: 278 RVKRLQH 285
           +V  +Q+
Sbjct: 333 KVLVVQN 339

[Close]

BLAST of CmoCh09G003540 vs. TAIR 10
Match: AT4G40000.1 (S-adenosyl-L-methionine-dependent methyltransferases superfamily protein )

HSP 1 Score: 55.5 bits (132), Expect = 1.6e-07
Identity = 51/199 (25.63%), Postives = 87/199 (43.72%), Query Frame = 0


Query: 221 GSIFMQGKASSMVAVALDPKPGWEVLDACSAPGNKTVHLASLMN--------GEGRIIAC 280
           G++  Q   S +  + LD  P   VLD C+APG+KT  L  +++          G ++A 
Sbjct: 158 GNMTRQESVSMVPPLFLDVHPDHFVLDMCAAPGSKTFQLLEIIHESSEPGSLPNGMVVAN 217

Query: 281 ELNENRVKRLQHTIKLSGASNIEVLHGD-------------FLALDPKDPSLSKV--RAI 340
           +++  R   L H  K +  +N+ V + +              +A +     + ++    +
Sbjct: 218 DVDYKRSNLLIHQTKRTCTTNLMVTNNEGQHFPSCNTKRTLSVASETNPHPIDQLLFDRV 277

Query: 341 LLDPSCSGSGTAAARLDHLLPSHVEGKSSGDDLERLEKLAAFQRKALAHAFSFPAVERIV 397
           L D  CSG GT     D           SG+ L  L+ + A +  +L          R+V
Sbjct: 278 LCDVPCSGDGTLRKAPDIW---RRWNSGSGNGLHSLQVVLAMRGLSLLKVGG-----RMV 337

The following BLAST results are available for this feature:

BLAST of CmoCh09G003540 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
Q8GYE8	1.0e-168	63.98	25S rRNA (cytosine-C(5))-methyltransferase NSUN5 OS=Arabidopsis thaliana OX=3702...	[more]
Q8K4F6	3.4e-71	38.64	28S rRNA (cytosine-C(5))-methyltransferase OS=Mus musculus OX=10090 GN=Nsun5 PE=...	[more]
Q96P11	1.7e-70	38.82	28S rRNA (cytosine-C(5))-methyltransferase OS=Homo sapiens OX=9606 GN=NSUN5 PE=1...	[more]
O14039	4.5e-55	34.26	25S rRNA (cytosine-C(5))-methyltransferase rcm1 OS=Schizosaccharomyces pombe (st...	[more]
Q9NAA7	1.4e-48	30.61	26S rRNA (cytosine-C(5))-methyltransferase nsun-5 OS=Caenorhabditis elegans OX=6...	[more]

BLAST of CmoCh09G003540 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A6J1F919	8.1e-265	100.00	probable 28S rRNA (Cytosine-C(5))-methyltransferase OS=Cucurbita moschata OX=366...	[more]
A0A6J1IIH7	2.1e-257	97.65	probable 28S rRNA (Cytosine-C(5))-methyltransferase OS=Cucurbita maxima OX=3661 ...	[more]
A0A6J1C0F2	1.2e-236	90.23	probable 28S rRNA (Cytosine-C(5))-methyltransferase OS=Momordica charantia OX=36...	[more]
A0A0A0L2U2	1.0e-235	88.75	SAM_MT_RSMB_NOP domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_4G64...	[more]
A0A5D3D9A2	1.1e-232	82.82	Putative 28S rRNA (Cytosine-C(5))-methyltransferase isoform X1 OS=Cucumis melo v...	[more]

BLAST of CmoCh09G003540 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_022936709.1	1.7e-264	100.00	probable 28S rRNA (cytosine-C(5))-methyltransferase [Cucurbita moschata]	[more]
XP_023535594.1	9.4e-260	98.51	probable 28S rRNA (cytosine-C(5))-methyltransferase [Cucurbita pepo subsp. pepo]	[more]
KAG6591478.1	8.8e-258	97.23	25S rRNA (cytosine-C(5))-methyltransferase NSUN5, partial [Cucurbita argyrosperm...	[more]
XP_022977006.1	4.4e-257	97.65	probable 28S rRNA (cytosine-C(5))-methyltransferase [Cucurbita maxima]	[more]
KAG7024362.1	1.2e-249	91.35	putative 28S rRNA (cytosine-C(5))-methyltransferase, partial [Cucurbita argyrosp...	[more]

BLAST of CmoCh09G003540 vs. TAIR 10


Match Name	E-value	Identity	Description
AT5G26180.1	7.4e-170	63.98	S-adenosyl-L-methionine-dependent methyltransferases superfamily protein	[more]
AT5G26180.2	7.4e-170	63.98	S-adenosyl-L-methionine-dependent methyltransferases superfamily protein	[more]
AT3G13180.1	7.2e-16	29.83	NOL1/NOP2/sun family protein / antitermination NusB domain-containing protein	[more]
AT1G06560.1	7.0e-11	46.27	NOL1/NOP2/sun family protein	[more]
AT4G40000.1	1.6e-07	25.63	S-adenosyl-L-methionine-dependent methyltransferases superfamily protein	[more]

InterPro

Analysis Name: InterPro Annotations of Cucurbita moschata (Rifu) v1
Date Performed: 2021-10-25

Position :

Zoom :

x 1


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR023267	RNA (C5-cytosine) methyltransferase	PRINTS	PR02008	RCMTFAMILY	coord: 429..446 score: 32.07 coord: 373..389 score: 45.82 coord: 217..231 score: 24.27 coord: 315..327 score: 52.08 coord: 246..256 score: 67.26
IPR001678	SAM-dependent methyltransferase RsmB/NOP2-type	PFAM	PF01189	Methyltr_RsmB-F	coord: 235..445 e-value: 2.7E-26 score: 92.5
IPR001678	SAM-dependent methyltransferase RsmB/NOP2-type	PROSITE	PS51686	SAM_MT_RSMB_NOP	coord: 160..447 score: 51.101929
None	No IPR available	GENE3D	3.40.50.150	Vaccinia Virus protein VP39	coord: 226..452 e-value: 3.9E-69 score: 234.2
None	No IPR available	GENE3D	3.30.70.1170	Sun protein; domain 3	coord: 190..225 e-value: 4.6E-7 score: 32.0
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 1..28
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 451..479
None	No IPR available	PANTHER	PTHR22807:SF66	BNAA09G04380D PROTEIN	coord: 7..464
None	No IPR available	PANTHER	PTHR22807	NOP2 YEAST -RELATED NOL1/NOP2/FMU SUN DOMAIN-CONTAINING	coord: 7..464
None	No IPR available	CDD	cd02440	AdoMet_MTases	coord: 245..333 e-value: 1.84681E-8 score: 50.5063
IPR029063	S-adenosyl-L-methionine-dependent methyltransferase	SUPERFAMILY	53335	S-adenosyl-L-methionine-dependent methyltransferases	coord: 183..446

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
CmoCh09G003540.1	CmoCh09G003540.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0001510	RNA methylation
molecular_function	GO:0008168	methyltransferase activity
molecular_function	GO:0003723	RNA binding