CmoCh09G003460 (gene) Cucurbita moschata (Rifu) v1

Overview


Name	CmoCh09G003460
Type	gene
Organism	Cucurbita moschata (Cucurbita moschata (Rifu) v1)
Description	Protein of unknown function (DUF3511)
Location	Cmo_Chr09: 1493348 .. 1493671 (+)
RNA-Seq Expression	CmoCh09G003460
Synteny	CmoCh09G003460

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDSpolypeptide

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGGAAGATTACAGGTCGCATGGAAATGGGTTCGGCGGGGACATCAACACAGAGAGCAACTCCACCACAAACCCTGGAAGCTCATACGAATTGAGGTCATATTCCGCGTCTTATGCGCAGACCCAGATGGAGATGAAGAAAGGGGAAAAGGGTTGTGGGTCTTTCCCCAAGTCTTGGAGCTTGTCGGACCCTGAATTTCAGAGGAAGAAGAGGGTTGCTAGCTACAAGATGTACTCTGTGGAAGGCAAAATGAAGGGGTCTTTCAGAAACAGCTTCCGATGGCTGAAGCGCAGATGCGAACAGGTGGTTTATGGGTGGTGGTGA

mRNA sequence

ATGGAAGATTACAGGTCGCATGGAAATGGGTTCGGCGGGGACATCAACACAGAGAGCAACTCCACCACAAACCCTGGAAGCTCATACGAATTGAGGTCATATTCCGCGTCTTATGCGCAGACCCAGATGGAGATGAAGAAAGGGGAAAAGGGTTGTGGGTCTTTCCCCAAGTCTTGGAGCTTGTCGGACCCTGAATTTCAGAGGAAGAAGAGGGTTGCTAGCTACAAGATGTACTCTGTGGAAGGCAAAATGAAGGGGTCTTTCAGAAACAGCTTCCGATGGCTGAAGCGCAGATGCGAACAGGTGGTTTATGGGTGGTGGTGA

Coding sequence (CDS)

ATGGAAGATTACAGGTCGCATGGAAATGGGTTCGGCGGGGACATCAACACAGAGAGCAACTCCACCACAAACCCTGGAAGCTCATACGAATTGAGGTCATATTCCGCGTCTTATGCGCAGACCCAGATGGAGATGAAGAAAGGGGAAAAGGGTTGTGGGTCTTTCCCCAAGTCTTGGAGCTTGTCGGACCCTGAATTTCAGAGGAAGAAGAGGGTTGCTAGCTACAAGATGTACTCTGTGGAAGGCAAAATGAAGGGGTCTTTCAGAAACAGCTTCCGATGGCTGAAGCGCAGATGCGAACAGGTGGTTTATGGGTGGTGGTGA

Protein sequence

MEDYRSHGNGFGGDINTESNSTTNPGSSYELRSYSASYAQTQMEMKKGEKGCGSFPKSWSLSDPEFQRKKRVASYKMYSVEGKMKGSFRNSFRWLKRRCEQVVYGWW

Homology

[Close]

BLAST of CmoCh09G003460 vs. ExPASy TrEMBL
Match: A0A6J1IF42 (uncharacterized protein LOC111476369 OS=Cucurbita maxima OX=3661 GN=LOC111476369 PE=4 SV=1)

HSP 1 Score: 211.1 bits (536), Expect = 2.3e-51
Identity = 102/107 (95.33%), Postives = 102/107 (95.33%), Query Frame = 0


Query: 1   MEDYRSHGNGFGGDINTESNSTTNPGSSYELRSYSASYAQTQMEMKKGEKGCGSFPKSWS 60
           MEDYRS GNGFGG INTESN  TNPGSSYELRSYSASYAQTQMEMKKGEKGCGSFPKSWS
Sbjct: 1   MEDYRSRGNGFGGHINTESNYVTNPGSSYELRSYSASYAQTQMEMKKGEKGCGSFPKSWS 60

Query: 61  LSDPEFQRKKRVASYKMYSVEGKMKGSFRNSFRWLKRRCEQVVYGWW 108
           LSDPEFQRKKRVASYKMYSVEGKMKGS RNSFRWLKRRCEQVVYGWW
Sbjct: 61  LSDPEFQRKKRVASYKMYSVEGKMKGSIRNSFRWLKRRCEQVVYGWW 107

[Close]

BLAST of CmoCh09G003460 vs. ExPASy TrEMBL
Match: A0A6J1C841 (uncharacterized protein LOC111008293 OS=Momordica charantia OX=3673 GN=LOC111008293 PE=4 SV=1)

HSP 1 Score: 169.9 bits (429), Expect = 5.9e-39
Identity = 84/112 (75.00%), Postives = 92/112 (82.14%), Query Frame = 0


Query: 1   MEDYRSHGNGFGGDINTESNSTTNPGSSYELRSYSASYAQTQMEM-----KKGEKGCGSF 60
           MEDYRS+GNGF GD NTE N    P +SY+LRSYSASYAQTQME+     KK +   GS 
Sbjct: 1   MEDYRSYGNGFSGDANTEGNYAAKPRNSYDLRSYSASYAQTQMEIKESQFKKAKTPSGSV 60

Query: 61  PKSWSLSDPEFQRKKRVASYKMYSVEGKMKGSFRNSFRWLKRRCEQVVYGWW 108
            KSWS +DPEFQRKKRVA+YKMYSVEGKMKGSFRNSFRWLKR+CEQVVYGWW
Sbjct: 61  SKSWSFADPEFQRKKRVANYKMYSVEGKMKGSFRNSFRWLKRKCEQVVYGWW 112

[Close]

BLAST of CmoCh09G003460 vs. ExPASy TrEMBL
Match: A0A5D3D951 (Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold134G002050 PE=4 SV=1)

HSP 1 Score: 169.9 bits (429), Expect = 5.9e-39
Identity = 85/112 (75.89%), Postives = 92/112 (82.14%), Query Frame = 0


Query: 1   MEDYRSHGNGFGGDINTESNSTTNPGSSYELRSYSASYAQTQMEM-----KKGEKGCGSF 60
           MEDYR HGNGF G+ NTE N  TN  +SYELRSYSA+YAQTQME+     KKG+   GS 
Sbjct: 1   MEDYRYHGNGFSGENNTEFNYATNSRNSYELRSYSATYAQTQMEIRDSQFKKGKSHSGSV 60

Query: 61  PKSWSLSDPEFQRKKRVASYKMYSVEGKMKGSFRNSFRWLKRRCEQVVYGWW 108
            KSWS SDPEFQRKKRVA+YKMYSVEGKMKGSFRNSFRWLKR+CE VVYGWW
Sbjct: 61  SKSWSFSDPEFQRKKRVANYKMYSVEGKMKGSFRNSFRWLKRKCEHVVYGWW 112

[Close]

BLAST of CmoCh09G003460 vs. ExPASy TrEMBL
Match: A0A0A0L414 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_4G646210 PE=4 SV=1)

HSP 1 Score: 167.5 bits (423), Expect = 2.9e-38
Identity = 84/112 (75.00%), Postives = 91/112 (81.25%), Query Frame = 0


Query: 1   MEDYRSHGNGFGGDINTESNSTTNPGSSYELRSYSASYAQTQMEM-----KKGEKGCGSF 60
           MEDYR HGNGF G  NTE N  TN  +SYELR+YSA+YAQTQME+     KKG+   GS 
Sbjct: 1   MEDYRYHGNGFSGGNNTEFNYATNSRNSYELRTYSATYAQTQMEIRDSQFKKGKSHSGSV 60

Query: 61  PKSWSLSDPEFQRKKRVASYKMYSVEGKMKGSFRNSFRWLKRRCEQVVYGWW 108
            KSWS SDPEFQRKKRVA+YKMYSVEGKMKGSFRNSFRWLKR+CE VVYGWW
Sbjct: 61  SKSWSFSDPEFQRKKRVANYKMYSVEGKMKGSFRNSFRWLKRKCEHVVYGWW 112

[Close]

BLAST of CmoCh09G003460 vs. ExPASy TrEMBL
Match: M5XFG9 (Uncharacterized protein OS=Prunus persica OX=3760 GN=PRUPE_1G409100 PE=4 SV=1)

HSP 1 Score: 127.5 bits (319), Expect = 3.4e-26
Identity = 73/119 (61.34%), Postives = 80/119 (67.23%), Query Frame = 0


Query: 1   MEDY---RSHGNGFGGDINTESNSTTNPGSSYELRSYSASYAQTQM--------EMKKGE 60
           MEDY   +S+G G G            P +SYELRSYS SYAQTQM        ++KKG+
Sbjct: 1   MEDYSRSKSYGTGSGTMQMENYYGPPRPPTSYELRSYSVSYAQTQMANNNNRDFKLKKGK 60

Query: 61  KGCGSFPKS-WSLSDPEFQRKKRVASYKMYSVEGKMKGSFRNSFRWLKRRCEQVVYGWW 108
              GS  KS W L DPE QRKKRVASYKMYSVEGKMKGSFR SFRWLK +C QVVYGWW
Sbjct: 61  STSGSSSKSNWGLMDPELQRKKRVASYKMYSVEGKMKGSFRKSFRWLKDKCTQVVYGWW 119

[Close]

BLAST of CmoCh09G003460 vs. NCBI nr
Match: KAG7024353.1 (hypothetical protein SDJN02_13167, partial [Cucurbita argyrosperma subsp. argyrosperma])

HSP 1 Score: 216.9 bits (551), Expect = 8.7e-53
Identity = 104/107 (97.20%), Postives = 104/107 (97.20%), Query Frame = 0


Query: 1   MEDYRSHGNGFGGDINTESNSTTNPGSSYELRSYSASYAQTQMEMKKGEKGCGSFPKSWS 60
           MEDYRSHGNGFGGDINTES S TNPGSSYELRSYSASYAQTQME KKGEKGCGSFPKSWS
Sbjct: 1   MEDYRSHGNGFGGDINTESTSATNPGSSYELRSYSASYAQTQMETKKGEKGCGSFPKSWS 60

Query: 61  LSDPEFQRKKRVASYKMYSVEGKMKGSFRNSFRWLKRRCEQVVYGWW 108
           LSDPEFQRKKRVASYKMYSVEGKMKGSFRNSFRWLKRRCEQVVYGWW
Sbjct: 61  LSDPEFQRKKRVASYKMYSVEGKMKGSFRNSFRWLKRRCEQVVYGWW 107

[Close]

BLAST of CmoCh09G003460 vs. NCBI nr
Match: XP_022975771.1 (uncharacterized protein LOC111476369 [Cucurbita maxima])

HSP 1 Score: 211.1 bits (536), Expect = 4.8e-51
Identity = 102/107 (95.33%), Postives = 102/107 (95.33%), Query Frame = 0


Query: 1   MEDYRSHGNGFGGDINTESNSTTNPGSSYELRSYSASYAQTQMEMKKGEKGCGSFPKSWS 60
           MEDYRS GNGFGG INTESN  TNPGSSYELRSYSASYAQTQMEMKKGEKGCGSFPKSWS
Sbjct: 1   MEDYRSRGNGFGGHINTESNYVTNPGSSYELRSYSASYAQTQMEMKKGEKGCGSFPKSWS 60

Query: 61  LSDPEFQRKKRVASYKMYSVEGKMKGSFRNSFRWLKRRCEQVVYGWW 108
           LSDPEFQRKKRVASYKMYSVEGKMKGS RNSFRWLKRRCEQVVYGWW
Sbjct: 61  LSDPEFQRKKRVASYKMYSVEGKMKGSIRNSFRWLKRRCEQVVYGWW 107

[Close]

BLAST of CmoCh09G003460 vs. NCBI nr
Match: KAG6591473.1 (hypothetical protein SDJN03_13819, partial [Cucurbita argyrosperma subsp. sororia])

HSP 1 Score: 199.1 bits (505), Expect = 1.9e-47
Identity = 98/101 (97.03%), Postives = 98/101 (97.03%), Query Frame = 0


Query: 1   MEDYRSHGNGFGGDINTESNSTTNPGSSYELRSYSASYAQTQMEMKKGEKGCGSFPKSWS 60
           MED RSHGNGFGGDINTESNS TNPGSSYELRSYSASYAQTQME KKGEKGCGSFPKSWS
Sbjct: 1   MEDDRSHGNGFGGDINTESNSATNPGSSYELRSYSASYAQTQMETKKGEKGCGSFPKSWS 60

Query: 61  LSDPEFQRKKRVASYKMYSVEGKMKGSFRNSFRWLKRRCEQ 102
           LSDPEFQRKKRVASYKMYSVEGKMKGSFRNSFRWLKRRCEQ
Sbjct: 61  LSDPEFQRKKRVASYKMYSVEGKMKGSFRNSFRWLKRRCEQ 101

[Close]

BLAST of CmoCh09G003460 vs. NCBI nr
Match: XP_022136638.1 (uncharacterized protein LOC111008293 [Momordica charantia] >XP_022158308.1 uncharacterized protein LOC111024820 [Momordica charantia])

HSP 1 Score: 169.9 bits (429), Expect = 1.2e-38
Identity = 84/112 (75.00%), Postives = 92/112 (82.14%), Query Frame = 0


Query: 1   MEDYRSHGNGFGGDINTESNSTTNPGSSYELRSYSASYAQTQMEM-----KKGEKGCGSF 60
           MEDYRS+GNGF GD NTE N    P +SY+LRSYSASYAQTQME+     KK +   GS 
Sbjct: 1   MEDYRSYGNGFSGDANTEGNYAAKPRNSYDLRSYSASYAQTQMEIKESQFKKAKTPSGSV 60

Query: 61  PKSWSLSDPEFQRKKRVASYKMYSVEGKMKGSFRNSFRWLKRRCEQVVYGWW 108
            KSWS +DPEFQRKKRVA+YKMYSVEGKMKGSFRNSFRWLKR+CEQVVYGWW
Sbjct: 61  SKSWSFADPEFQRKKRVANYKMYSVEGKMKGSFRNSFRWLKRKCEQVVYGWW 112

[Close]

BLAST of CmoCh09G003460 vs. NCBI nr
Match: KAA0064509.1 (uncharacterized protein E6C27_scaffold255G002260 [Cucumis melo var. makuwa] >TYK20081.1 uncharacterized protein E5676_scaffold134G002050 [Cucumis melo var. makuwa])

HSP 1 Score: 169.9 bits (429), Expect = 1.2e-38
Identity = 85/112 (75.89%), Postives = 92/112 (82.14%), Query Frame = 0


Query: 1   MEDYRSHGNGFGGDINTESNSTTNPGSSYELRSYSASYAQTQMEM-----KKGEKGCGSF 60
           MEDYR HGNGF G+ NTE N  TN  +SYELRSYSA+YAQTQME+     KKG+   GS 
Sbjct: 1   MEDYRYHGNGFSGENNTEFNYATNSRNSYELRSYSATYAQTQMEIRDSQFKKGKSHSGSV 60

Query: 61  PKSWSLSDPEFQRKKRVASYKMYSVEGKMKGSFRNSFRWLKRRCEQVVYGWW 108
            KSWS SDPEFQRKKRVA+YKMYSVEGKMKGSFRNSFRWLKR+CE VVYGWW
Sbjct: 61  SKSWSFSDPEFQRKKRVANYKMYSVEGKMKGSFRNSFRWLKRKCEHVVYGWW 112

[Close]

BLAST of CmoCh09G003460 vs. TAIR 10
Match: AT5G11970.1 (Protein of unknown function (DUF3511) )

HSP 1 Score: 101.3 bits (251), Expect = 5.0e-22
Identity = 52/80 (65.00%), Postives = 59/80 (73.75%), Query Frame = 0


Query: 30  ELRSYSASYAQTQMEM--KKGEKGCGSFPKSWSLSDPEFQRKKRVASYKMYSVEGKMKGS 89
           + RSYSASY   +  +   K EK      KSW ++DPE QRKKRVASYKMY VEGK+KGS
Sbjct: 27  DFRSYSASYGTRENNIYDVKKEKSIAR-SKSWGITDPELQRKKRVASYKMYGVEGKVKGS 86

Query: 90  FRNSFRWLKRRCEQVVYGWW 108
           FRNSFRWLK+R  QVVYGWW
Sbjct: 87  FRNSFRWLKQRYTQVVYGWW 105

[Close]

BLAST of CmoCh09G003460 vs. TAIR 10
Match: AT2G19460.1 (Protein of unknown function (DUF3511) )

HSP 1 Score: 81.6 bits (200), Expect = 4.1e-16
Identity = 50/115 (43.48%), Postives = 69/115 (60.00%), Query Frame = 0


Query: 1   MEDY--RSHGNGFGGDINTESNSTTNPG-------SSYELRSYSASYAQ--TQM-EMKKG 60
           MEDY  RS+G+G   D+   S    + G          +LRSYS SY    T++ E +  
Sbjct: 1   MEDYRSRSYGDGRTSDLQQYSAHRRSDGPDSFSGNGMQDLRSYSTSYTDYPTRIPEDQNP 60

Query: 61  EKGCGSFPKSWSLSDPEFQRKKRVASYKMYSVEGKMKGSFRNSFRWLKRRCEQVV 104
           +KG  S   SW   DP+ QRKKRV SY+ Y+VEGK+KGSFR SF+W+K +C +++
Sbjct: 61  KKGRSSSSSSWGFVDPDLQRKKRVVSYRAYTVEGKLKGSFRKSFKWIKDKCNKLL 115

[Close]

BLAST of CmoCh09G003460 vs. TAIR 10
Match: AT2G47480.1 (Protein of unknown function (DUF3511) )

HSP 1 Score: 65.1 bits (157), Expect = 4.0e-11
Identity = 31/76 (40.79%), Postives = 44/76 (57.89%), Query Frame = 0


Query: 29  YELRSYSASYAQTQMEMKKGEKGCGSFPKSWSLSDPEFQRKKRVASYKMYSVEGKMKGSF 88
           Y  R Y  S      ++  G     S  +   LSD E +RKKR+A YK Y+VEGK+K + 
Sbjct: 33  YGTRDYPPSLPPPPGKVAAGRSNASSSLRIGGLSDAEMKRKKRIARYKAYTVEGKVKSTL 92

Query: 89  RNSFRWLKRRCEQVVY 105
           +N FRW+K +C Q+V+
Sbjct: 93  KNGFRWIKNKCCQIVH 108

[Close]

BLAST of CmoCh09G003460 vs. TAIR 10
Match: AT1G72720.1 (Protein of unknown function (DUF3511) )

HSP 1 Score: 64.7 bits (156), Expect = 5.2e-11
Identity = 32/62 (51.61%), Postives = 38/62 (61.29%), Query Frame = 0


Query: 46  KKGEKGCGSFPKSWSLSDPEFQRKKRVASYKMYSVEGKMKGSFRNSFRWLKRRCEQVVYG 105
           KKG KG         L + E QRKKRVASY +Y VEG++KGS + SF+W K  C   VYG
Sbjct: 75  KKGFKG---------LCEAEIQRKKRVASYNVYGVEGRVKGSMKKSFKWFKETCSNAVYG 127

Query: 106 WW 108
            W
Sbjct: 135 LW 127

[Close]

BLAST of CmoCh09G003460 vs. TAIR 10
Match: AT3G13910.1 (Protein of unknown function (DUF3511) )

HSP 1 Score: 63.2 bits (152), Expect = 1.5e-10
Identity = 28/40 (70.00%), Postives = 33/40 (82.50%), Query Frame = 0


Query: 57 KSWSLSDPEFQRKKRVASYKMYSVEGKMKGSFRNSFRWLK 97
          +SWS SDPE +RK+RVA YK+YSVE KMKGS R SF+W K
Sbjct: 57 RSWSFSDPESRRKRRVAGYKVYSVEQKMKGSIRKSFKWFK 96

The following BLAST results are available for this feature:

BLAST of CmoCh09G003460 vs.


Match Name	E-value	Identity	Description

BLAST of CmoCh09G003460 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A6J1IF42	2.3e-51	95.33	uncharacterized protein LOC111476369 OS=Cucurbita maxima OX=3661 GN=LOC111476369...	[more]
A0A6J1C841	5.9e-39	75.00	uncharacterized protein LOC111008293 OS=Momordica charantia OX=3673 GN=LOC111008...	[more]
A0A5D3D951	5.9e-39	75.89	Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold...	[more]
A0A0A0L414	2.9e-38	75.00	Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_4G646210 PE=4 SV=1	[more]
M5XFG9	3.4e-26	61.34	Uncharacterized protein OS=Prunus persica OX=3760 GN=PRUPE_1G409100 PE=4 SV=1	[more]

BLAST of CmoCh09G003460 vs. NCBI nr


Match Name	E-value	Identity	Description
KAG7024353.1	8.7e-53	97.20	hypothetical protein SDJN02_13167, partial [Cucurbita argyrosperma subsp. argyro...	[more]
XP_022975771.1	4.8e-51	95.33	uncharacterized protein LOC111476369 [Cucurbita maxima]	[more]
KAG6591473.1	1.9e-47	97.03	hypothetical protein SDJN03_13819, partial [Cucurbita argyrosperma subsp. sorori...	[more]
XP_022136638.1	1.2e-38	75.00	uncharacterized protein LOC111008293 [Momordica charantia] >XP_022158308.1 uncha...	[more]
KAA0064509.1	1.2e-38	75.89	uncharacterized protein E6C27_scaffold255G002260 [Cucumis melo var. makuwa] >TYK...	[more]

BLAST of CmoCh09G003460 vs. TAIR 10


Match Name	E-value	Identity	Description
AT5G11970.1	5.0e-22	65.00	Protein of unknown function (DUF3511)	[more]
AT2G19460.1	4.1e-16	43.48	Protein of unknown function (DUF3511)	[more]
AT2G47480.1	4.0e-11	40.79	Protein of unknown function (DUF3511)	[more]
AT1G72720.1	5.2e-11	51.61	Protein of unknown function (DUF3511)	[more]
AT3G13910.1	1.5e-10	70.00	Protein of unknown function (DUF3511)	[more]

InterPro

Analysis Name: InterPro Annotations of Cucurbita moschata (Rifu) v1
Date Performed: 2021-10-25


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR021899	Protein of unknown function DUF3511	PFAM	PF12023	DUF3511	coord: 62..105 e-value: 1.6E-25 score: 88.7
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 1..28
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 12..28
None	No IPR available	PANTHER	PTHR33193:SF54	DUF3511 DOMAIN PROTEIN	coord: 1..106
None	No IPR available	PANTHER	PTHR33193	DOMAIN PROTEIN, PUTATIVE (DUF3511)-RELATED	coord: 1..106

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
CmoCh09G003460.1	CmoCh09G003460.1	mRNA