CmoCh09G003300 (gene) Cucurbita moschata (Rifu) v1
Overview
Sequences
The following sequences are available for this feature:
Legend: exonfive_prime_UTRCDSpolypeptidethree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below.TTTAATTTTGCAATATTTGAATTCGTTGCCATTTCAAAATGTTTAACGTCACTGAAATCCTACAAATTTCCCTCCTTTTTCCAAGCTTTCTTCAAAACCCGGGTATCTAGGGTTTCAAAACTGCACACAGCTTCCATTCCACTTCATTTTATACCTTCCTTATACCGCTTCTCCAGACACTCATCTCTCTATCACTACTTCCATTTGATTCTGTTACTTGAAGATGAACGAAACCCGATCGCAGCTACTCGTAGTTCCAAACCAGCTAGACCCTTATGGCTTGATGCTTTCAGAATCAATCCAACGTTTCTTTGATGAATATCGCAAAGGAGTTACCGATTTCTCCAACTTCATTCCCATTTTCTCTCGTTTGCTGCGAAATTTGCCCGACCCACCGGTGGCTGTTGTGTGGTTTTACTCTGCTCTGACGTTTCACACCGCTAAATCCACGGCCCGAGATTCTTCCGAAACACTTCTGGCTGTTAAGGATTTATTCCAACTCCTTGTTTCTTGCACAGCATCTTCCTGTTCGTCGAAAAGAATCGCGGTGCTGGCCCCGGTTATTTACTGTCTCTTCGATTTGATCGTCGAGAAGAAAACATCGAAGGAGGAGGCTGAGAATTTGATCGACGGCGTTGTAAGTTATATCAGCATTTGTTGTGGTCAAGAATCCGAGGAGGACGGTAGTTTCTTGAGGTTTGGTCCTTATTTTCTGGATTTGGCACGAGTTTGGATGGTGGACAAACCTGGAGAAGATTTGAAGGGTTTTCTCCCGCTTGTTAGCCATGAAATTTGTCAAGGCATCAGTACCAACGGTGGGGTGGGCTACTTCGCTGGGATCGTTATGTTTGAAGCTTTTCTGTTGAGGCTGTGCTTGAAATTTGCCTCTCGCATGTCCATGGTAGAGCTGCAAAATGAACTCCACGGCCGGGCGGTCCAAATGATTGCTGGGTTTCGTAGTTGCCACTTCTATGGTGAGATTTGATTTTGGTATTCCCTCTTTTTAATATCACGAGACTGTTAATTAACCTGGATTGTCCACAACTTGGGTAGCAAAAGCATGTTAAGTACTTGTCGCCGATCTTTTAATCTACTCATAGATGTCATATTTCATCTCATAAATGCCAGGGCGTTGCATTTTGCATATCTATCTTCAGTTTATTTGCTTTCATTTTGGTATGCATTGACTGGATGCTCTGTTCAACTATCATATTGATGCATGCAAACAAGGCATGAATCATACTGATATTGCTATCTGTAAACATTGCTAAAACCGGAGATCAGGGATGGCAGGCACATACTTTCTCTTGGGAATCATATAAACAAGTAGATTGTTCCATGTTCTTCACAAACAAATCTAATTCTGAAAGTAATATCTCTGTATGTGAGGTATAAAACAAAAATTCCAATGGCTTTTGCTTGCACGTTCATTATGTTTTCAGGGCTTCTCTTGTTCGTATTCCCTCTACATATCTGGATGACCAAGCTTTTCTTAGCTGCATCCGATCTTTTCTCCTATTATCAATGACTCTGGGTGCTTGTAATCTGAAATCTGTTGGTGCATATCAGATATTTTTTTCAGGATGCTGCTGCACTCAGTTTTGCCAACTACCCATTTGTTGGTCAGTATTTCTTTCTTCATATCTTCGTTTACCATGTCTTTAGTATGATTATATGTGGCTGTAGTACTCCTACTTCAAGATTGATGGCTTTTCCTCGTGAGATGTAGTTTGAGGTTCTGCAAAACTCTGCTACTATCCATCAGATACAAGCCCATCGTGGCTTAAGCTTGATCAGATGCATCTTTGGAAGTAATATTGCTTATTCACCTTGATGGGGTAAAGGGAATAAACCATTGATTTTCCTGAGTTGTTCCTTTTGTAGGGCTCTGCAGATGAAGTTCTTCTACGAGAAGTATTATACGATGCTGCAATAATACCAGAGTACCCGTTCCTTAAACTTCAATTTGGAACCGAACGACCTGCCGCCGATTTACGAGCTATTTGTTTGAATTGGTTATTTGTTGCTGATAATGGTATTCGATCCTTTAGGTATAACAAATCATAGTGTTCTAGAGGTTAGCTAGAGTATCTCTAATGTCAATTTCAACTTGGCTATGCATGTAATGTGCACAATCTGATTGATGCAGAGAGTCTGGCAATCTGAGCAAGGCTATGTCCTACATTAATGCCTTCCGCAATTCTTGTTGGCCTTCTCAGTTGATCAATTGGATCAGAAACCAATCAGGCTTCAGCGAGAGGATGAGCCAACCAAACATCTCCACACCCACGGCTCTTATTGGTTTGTTTCTATACGTGTGCATTACAAGTGATTTCATAAGCAATACTTTTTCTTTTTTAGTGTAGCGAAAATTTTCATGCATTTCTCTAAGTGGTAATGTGAGATCCTACATCGGTTGGAGAGGGGAACGAAACATTCTTTATAAGGGTGTGGAAACCTCTCCATAGCAAACATGTTTTAAAAACCTTGAAGGGAAGCCTGAAAGGGAAAGCCTAAAGAGGACAATATCTGCTAGCGGTGGGCTTAGGTTGTTACAGGTAATGAAACTATGGTTTGAAGAACACGAAGGTGACATTAGTGTACAACACAGACTTGTTCGTTGAGGATTGTTGGGAGGGAGTCCCACGTTGGCTAATTAAGGGGATGATCATGGGTTTATATGTAAGGAATACATCTCCGTTGGCATGAGGCCTTTTAGGAAAACCAAAAGCAGAACTACGAGAGCTTATGCTCAAAGTGGATAATATCATATCATTGTGGAGACTCGTGGTTCCTAAAACTGTTATGTATTGATGTGTTTGTTTGATGTTCTCTTATCAATGGCTGACGATTATTGATTTAACTTCAGAATGGCTTCTGGTATTGGAAGATCAAGGGGTGAGAGTGTTCGACCATTTGAACTCCAAGTTCAGAGCCAGAGATATCATATCCAAGTCAGGAGCTGAGTTCTTACAACCAGATGGCAAGAACAACTCAGATGTTAATTTCCCCAACAGCGTCACGAATGCGATGGATGAGGATCCCTCCGTTGGCGACTTCGACATGGTTGATTCGGTGGCTACAGCAGCAGCACAGGGAACATCCATCACCTTGACTGCAAACGGCATTGAAAATGGAAGAAAAAGGAAAGATTGCATGAATGACAAAGGGGACATGAGGATTAAGTTCCTTAGGCAGCATCTCCATGACAGTCCACTCAGAGAGAAATCTTTGCCATTGGTTTGATTTAGGAATCCATCACTTTCAGATGCTAATATGAAGTTATATATATATATAGAGAGAGAGACTGTCTGTAACACCTATCTATGATACCTTGGAGGAATTTTGTGCCTGCACTGCAGACCGCCTCTCGGCTTTAACGTTTCGTTTATCGGGTTATATATATGGTCTTGAAATTAGAATCTGTGTAAACTATGGATTTAATCAGATGATGTTCACGGCAATGCAAGGCCAGTAGGTTTAAATGATGAAAATACATATGATCTGAACTCCAAAAGGCCTTTTGTGTTCGTTCCCTA TTTAATTTTGCAATATTTGAATTCGTTGCCATTTCAAAATGTTTAACGTCACTGAAATCCTACAAATTTCCCTCCTTTTTCCAAGCTTTCTTCAAAACCCGGGTATCTAGGGTTTCAAAACTGCACACAGCTTCCATTCCACTTCATTTTATACCTTCCTTATACCGCTTCTCCAGACACTCATCTCTCTATCACTACTTCCATTTGATTCTGTTACTTGAAGATGAACGAAACCCGATCGCAGCTACTCGTAGTTCCAAACCAGCTAGACCCTTATGGCTTGATGCTTTCAGAATCAATCCAACGTTTCTTTGATGAATATCGCAAAGGAGTTACCGATTTCTCCAACTTCATTCCCATTTTCTCTCGTTTGCTGCGAAATTTGCCCGACCCACCGGTGGCTGTTGTGTGGTTTTACTCTGCTCTGACGTTTCACACCGCTAAATCCACGGCCCGAGATTCTTCCGAAACACTTCTGGCTGTTAAGGATTTATTCCAACTCCTTGTTTCTTGCACAGCATCTTCCTGTTCGTCGAAAAGAATCGCGGTGCTGGCCCCGGTTATTTACTGTCTCTTCGATTTGATCGTCGAGAAGAAAACATCGAAGGAGGAGGCTGAGAATTTGATCGACGGCGTTGTAAGTTATATCAGCATTTGTTGTGGTCAAGAATCCGAGGAGGACGGTAGTTTCTTGAGGTTTGGTCCTTATTTTCTGGATTTGGCACGAGTTTGGATGGTGGACAAACCTGGAGAAGATTTGAAGGGTTTTCTCCCGCTTGTTAGCCATGAAATTTGTCAAGGCATCAGTACCAACGGTGGGGTGGGCTACTTCGCTGGGATCGTTATGTTTGAAGCTTTTCTGTTGAGGCTGTGCTTGAAATTTGCCTCTCGCATGTCCATGGTAGAGCTGCAAAATGAACTCCACGGCCGGGCGGTCCAAATGATTGCTGGGTTTCGTAGTTGCCACTTCTATGGGCTTCTCTTGTTCGTATTCCCTCTACATATCTGGATGACCAAGCTTTTCTTAGCTGCATCCGATCTTTTCTCCTATTATCAATGACTCTGGGTGCTTGTAATCTGAAATCTGTTGGTGCATATCAGATATTTTTTTCAGGATGCTGCTGCACTCAGTTTTGCCAACTACCCATTTGTTGGTCAGTATTTCTTTCTTCATATCTTCGTTTACCATGTCTTTAGTATGATTATATGTGGCTGTAGTACTCCTACTTCAAGATTGATGGCTTTTCCTCGTGAGATGTAGTTTGAGGTTCTGCAAAACTCTGCTACTATCCATCAGATACAAGCCCATCGTGGCTTAAGCTTGATCAGATGCATCTTTGGAAGGCTCTGCAGATGAAGTTCTTCTACGAGAAGTATTATACGATGCTGCAATAATACCAGAGTACCCGTTCCTTAAACTTCAATTTGGAACCGAACGACCTGCCGCCGATTTACGAGCTATTTGTTTGAATTGGTTATTTGTTGCTGATAATGGTATTCGATCCTTTAGAGAGTCTGGCAATCTGAGCAAGGCTATGTCCTACATTAATGCCTTCCGCAATTCTTGTTGGCCTTCTCAGTTGATCAATTGGATCAGAAACCAATCAGGCTTCAGCGAGAGGATGAGCCAACCAAACATCTCCACACCCACGGCTCTTATTGAATGGCTTCTGGTATTGGAAGATCAAGGGGTGAGAGTGTTCGACCATTTGAACTCCAAGTTCAGAGCCAGAGATATCATATCCAAGTCAGGAGCTGAGTTCTTACAACCAGATGGCAAGAACAACTCAGATGTTAATTTCCCCAACAGCGTCACGAATGCGATGGATGAGGATCCCTCCGTTGGCGACTTCGACATGGTTGATTCGGTGGCTACAGCAGCAGCACAGGGAACATCCATCACCTTGACTGCAAACGGCATTGAAAATGGAAGAAAAAGGAAAGATTGCATGAATGACAAAGGGGACATGAGGATTAAGTTCCTTAGGCAGCATCTCCATGACAGTCCACTCAGAGAGAAATCTTTGCCATTGGTTTGATTTAGGAATCCATCACTTTCAGATGCTAATATGAAGTTATATATATATATAGAGAGAGAGACTGTCTGTAACACCTATCTATGATACCTTGGAGGAATTTTGTGCCTGCACTGCAGACCGCCTCTCGGCTTTAACGTTTCGTTTATCGGGTTATATATATGGTCTTGAAATTAGAATCTGTGTAAACTATGGATTTAATCAGATGATGTTCACGGCAATGCAAGGCCAGTAGGTTTAAATGATGAAAATACATATGATCTGAACTCCAAAAGGCCTTTTGTGTTCGTTCCCTA ATGAACGAAACCCGATCGCAGCTACTCGTAGTTCCAAACCAGCTAGACCCTTATGGCTTGATGCTTTCAGAATCAATCCAACGTTTCTTTGATGAATATCGCAAAGGAGTTACCGATTTCTCCAACTTCATTCCCATTTTCTCTCGTTTGCTGCGAAATTTGCCCGACCCACCGGTGGCTGTTGTGTGGTTTTACTCTGCTCTGACGTTTCACACCGCTAAATCCACGGCCCGAGATTCTTCCGAAACACTTCTGGCTGTTAAGGATTTATTCCAACTCCTTGTTTCTTGCACAGCATCTTCCTGTTCGTCGAAAAGAATCGCGGTGCTGGCCCCGGTTATTTACTGTCTCTTCGATTTGATCGTCGAGAAGAAAACATCGAAGGAGGAGGCTGAGAATTTGATCGACGGCGTTGTAAGTTATATCAGCATTTGTTGTGGTCAAGAATCCGAGGAGGACGGTAGTTTCTTGAGGTTTGGTCCTTATTTTCTGGATTTGGCACGAGTTTGGATGGTGGACAAACCTGGAGAAGATTTGAAGGGTTTTCTCCCGCTTGTTAGCCATGAAATTTGTCAAGGCATCAGTACCAACGGTGGGGTGGGCTACTTCGCTGGGATCGTTATGTTTGAAGCTTTTCTGTTGAGGCTGTGCTTGAAATTTGCCTCTCGCATGTCCATGGTAGAGCTGCAAAATGAACTCCACGGCCGGGCGGTCCAAATGATTGCTGGGTTTCGTAGTTGCCACTTCTATGGGCTTCTCTTGTTCGTATTCCCTCTACATATCTGGATGACCAAGCTTTTCTTAGCTGCATCCGATCTTTTCTCCTATTATCAATGA MNETRSQLLVVPNQLDPYGLMLSESIQRFFDEYRKGVTDFSNFIPIFSRLLRNLPDPPVAVVWFYSALTFHTAKSTARDSSETLLAVKDLFQLLVSCTASSCSSKRIAVLAPVIYCLFDLIVEKKTSKEEAENLIDGVVSYISICCGQESEEDGSFLRFGPYFLDLARVWMVDKPGEDLKGFLPLVSHEICQGISTNGGVGYFAGIVMFEAFLLRLCLKFASRMSMVELQNELHGRAVQMIAGFRSCHFYGLLLFVFPLHIWMTKLFLAASDLFSYYQ Homology
BLAST of CmoCh09G003300 vs. ExPASy TrEMBL
Match: A0A6J1F7B7 (uncharacterized protein LOC111443021 OS=Cucurbita moschata OX=3662 GN=LOC111443021 PE=4 SV=1) HSP 1 Score: 506.9 bits (1304), Expect = 5.3e-140 Identity = 253/272 (93.01%), Postives = 258/272 (94.85%), Query Frame = 0
BLAST of CmoCh09G003300 vs. ExPASy TrEMBL
Match: A0A6J1IH91 (uncharacterized protein LOC111477205 OS=Cucurbita maxima OX=3661 GN=LOC111477205 PE=4 SV=1) HSP 1 Score: 501.5 bits (1290), Expect = 2.2e-138 Identity = 251/272 (92.28%), Postives = 257/272 (94.49%), Query Frame = 0
BLAST of CmoCh09G003300 vs. ExPASy TrEMBL
Match: A0A5A7VB80 (Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold134G002240 PE=4 SV=1) HSP 1 Score: 473.0 bits (1216), Expect = 8.5e-130 Identity = 234/272 (86.03%), Postives = 248/272 (91.18%), Query Frame = 0
BLAST of CmoCh09G003300 vs. ExPASy TrEMBL
Match: A0A1S3BV97 (uncharacterized protein LOC103493648 OS=Cucumis melo OX=3656 GN=LOC103493648 PE=4 SV=1) HSP 1 Score: 473.0 bits (1216), Expect = 8.5e-130 Identity = 234/272 (86.03%), Postives = 248/272 (91.18%), Query Frame = 0
BLAST of CmoCh09G003300 vs. ExPASy TrEMBL
Match: A0A0A0L0N4 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_4G645970 PE=4 SV=1) HSP 1 Score: 471.5 bits (1212), Expect = 2.5e-129 Identity = 234/272 (86.03%), Postives = 247/272 (90.81%), Query Frame = 0
BLAST of CmoCh09G003300 vs. NCBI nr
Match: XP_022936386.1 (uncharacterized protein LOC111443021 [Cucurbita moschata]) HSP 1 Score: 506.9 bits (1304), Expect = 1.1e-139 Identity = 253/272 (93.01%), Postives = 258/272 (94.85%), Query Frame = 0
BLAST of CmoCh09G003300 vs. NCBI nr
Match: XP_023536557.1 (uncharacterized protein LOC111797693 [Cucurbita pepo subsp. pepo]) HSP 1 Score: 504.2 bits (1297), Expect = 7.1e-139 Identity = 252/272 (92.65%), Postives = 257/272 (94.49%), Query Frame = 0
BLAST of CmoCh09G003300 vs. NCBI nr
Match: KAG6591457.1 (hypothetical protein SDJN03_13803, partial [Cucurbita argyrosperma subsp. sororia]) HSP 1 Score: 501.9 bits (1291), Expect = 3.5e-138 Identity = 251/272 (92.28%), Postives = 256/272 (94.12%), Query Frame = 0
BLAST of CmoCh09G003300 vs. NCBI nr
Match: XP_022977007.1 (uncharacterized protein LOC111477205 [Cucurbita maxima]) HSP 1 Score: 501.5 bits (1290), Expect = 4.6e-138 Identity = 251/272 (92.28%), Postives = 257/272 (94.49%), Query Frame = 0
BLAST of CmoCh09G003300 vs. NCBI nr
Match: KAG7024338.1 (hypothetical protein SDJN02_13152, partial [Cucurbita argyrosperma subsp. argyrosperma]) HSP 1 Score: 485.0 bits (1247), Expect = 4.5e-133 Identity = 241/243 (99.18%), Postives = 241/243 (99.18%), Query Frame = 0
BLAST of CmoCh09G003300 vs. TAIR 10
Match: AT5G11780.1 (unknown protein; Has 37 Blast hits to 37 proteins in 12 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 3; Plants - 34; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). ) HSP 1 Score: 166.8 bits (421), Expect = 2.5e-41 Identity = 96/244 (39.34%), Postives = 155/244 (63.52%), Query Frame = 0
The following BLAST results are available for this feature:
InterPro
Analysis Name: InterPro Annotations of Cucurbita moschata (Rifu) v1
Date Performed: 2021-10-25
Relationships
The following mRNA feature(s) are a part of this gene:
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