CmoCh09G002290 (gene) Cucurbita moschata (Rifu) v1

Overview


Name	CmoCh09G002290
Type	gene
Organism	Cucurbita moschata (Cucurbita moschata (Rifu) v1)
Description	transcription factor HEC2-like
Location	Cmo_Chr09: 1062565 .. 1063254 (-)
RNA-Seq Expression	CmoCh09G002290
Synteny	CmoCh09G002290

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDSpolypeptide

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGGAGATTATGATGATGATGCAACAAATGGAGAAAATCCCTGAATTTTACAATCATCTCTCACCGCCCTCCGATCATTTCAGCTCAAGCACCACCGACCCACATTGCCTGGAAACCCTTCAACAAGCCGCGGAGTCCTCGTCGCCTCCATTCACCAACAACCTACCTTATAATTTGCCTCAAACTGTTCCATTCCCCACCAGTTCACGGTGGCGAAACTCTGGCGGTGAAACGGACTTGCAGAAACAGAGGTCTGTGGCGGCGATGAGGGAGATGATATTCCGAATAGCAGTGATGCAACCAATCCAAATAGACCCAGAAGCGGTGAAGCCACCAAAGAGGAGGAACGTCAAGATTTCAACCGACCCACAAAGCGTAGCGGCTCGACATAGAAGAGAGAGAATTAGCGAGAGAATTAGGATACTCCAAAGATTGGTCCCTGGAGGTACCAAAATGGATACCGCTTCTATGTTGGATGAGGCTATACATTACGTAAAATTCTTGAAGACCCAAGTGCAATCCCTCGAAAGAGCCGCCACCAACAGGCCACTCCCTGATGCTGCTGCAGCAGCAGCAGCAGCAGCAGCACCTGGCGTAGGGTTTCCTCTGGAAATGTCAAGTGGCAGCTATGTCCCCATGGCCAAACCATCCCAAATGACTCACAACCTTGAGCAGTACGGAGATGCTTAA

mRNA sequence

ATGGAGATTATGATGATGATGCAACAAATGGAGAAAATCCCTGAATTTTACAATCATCTCTCACCGCCCTCCGATCATTTCAGCTCAAGCACCACCGACCCACATTGCCTGGAAACCCTTCAACAAGCCGCGGAGTCCTCGTCGCCTCCATTCACCAACAACCTACCTTATAATTTGCCTCAAACTGTTCCATTCCCCACCAGTTCACGGTGGCGAAACTCTGGCGGTGAAACGGACTTGCAGAAACAGAGGTCTGTGGCGGCGATGAGGGAGATGATATTCCGAATAGCAGTGATGCAACCAATCCAAATAGACCCAGAAGCGGTGAAGCCACCAAAGAGGAGGAACGTCAAGATTTCAACCGACCCACAAAGCGTAGCGGCTCGACATAGAAGAGAGAGAATTAGCGAGAGAATTAGGATACTCCAAAGATTGGTCCCTGGAGGTACCAAAATGGATACCGCTTCTATGTTGGATGAGGCTATACATTACGTAAAATTCTTGAAGACCCAAGTGCAATCCCTCGAAAGAGCCGCCACCAACAGGCCACTCCCTGATGCTGCTGCAGCAGCAGCAGCAGCAGCAGCACCTGGCGTAGGGTTTCCTCTGGAAATGTCAAGTGGCAGCTATGTCCCCATGGCCAAACCATCCCAAATGACTCACAACCTTGAGCAGTACGGAGATGCTTAA

Coding sequence (CDS)

ATGGAGATTATGATGATGATGCAACAAATGGAGAAAATCCCTGAATTTTACAATCATCTCTCACCGCCCTCCGATCATTTCAGCTCAAGCACCACCGACCCACATTGCCTGGAAACCCTTCAACAAGCCGCGGAGTCCTCGTCGCCTCCATTCACCAACAACCTACCTTATAATTTGCCTCAAACTGTTCCATTCCCCACCAGTTCACGGTGGCGAAACTCTGGCGGTGAAACGGACTTGCAGAAACAGAGGTCTGTGGCGGCGATGAGGGAGATGATATTCCGAATAGCAGTGATGCAACCAATCCAAATAGACCCAGAAGCGGTGAAGCCACCAAAGAGGAGGAACGTCAAGATTTCAACCGACCCACAAAGCGTAGCGGCTCGACATAGAAGAGAGAGAATTAGCGAGAGAATTAGGATACTCCAAAGATTGGTCCCTGGAGGTACCAAAATGGATACCGCTTCTATGTTGGATGAGGCTATACATTACGTAAAATTCTTGAAGACCCAAGTGCAATCCCTCGAAAGAGCCGCCACCAACAGGCCACTCCCTGATGCTGCTGCAGCAGCAGCAGCAGCAGCAGCACCTGGCGTAGGGTTTCCTCTGGAAATGTCAAGTGGCAGCTATGTCCCCATGGCCAAACCATCCCAAATGACTCACAACCTTGAGCAGTACGGAGATGCTTAA

Protein sequence

MEIMMMMQQMEKIPEFYNHLSPPSDHFSSSTTDPHCLETLQQAAESSSPPFTNNLPYNLPQTVPFPTSSRWRNSGGETDLQKQRSVAAMREMIFRIAVMQPIQIDPEAVKPPKRRNVKISTDPQSVAARHRRERISERIRILQRLVPGGTKMDTASMLDEAIHYVKFLKTQVQSLERAATNRPLPDAAAAAAAAAAPGVGFPLEMSSGSYVPMAKPSQMTHNLEQYGDA

Homology

[Close]

BLAST of CmoCh09G002290 vs. ExPASy Swiss-Prot
Match: Q9SND4 (Transcription factor HEC2 OS=Arabidopsis thaliana OX=3702 GN=HEC2 PE=1 SV=1)

HSP 1 Score: 186.8 bits (473), Expect = 2.7e-46
Identity = 121/207 (58.45%), Postives = 139/207 (67.15%), Query Frame = 0


Query: 5   MMMQQMEKIPEFYNHLSP-PSDH----FSSSTTDPHCLETLQQAAESSSPPFTNNLPYNL 64
           MMMQQMEK+PE +++ +P P+ H     S S T P            S  PF   +P++ 
Sbjct: 10  MMMQQMEKLPEHFSNSNPNPNPHNIMMLSESNTHPFFFNPTH-----SHLPFDQTMPHHQ 69

Query: 65  P----QTVPFPTSSRWRNSGGETDLQKQRSVAAMREMIFRIAVMQPIQIDPEAVKPPKRR 124
           P    +  P P+SS     GG +D     ++AAMREMIFRIAVMQPI IDPE+VKPPKR+
Sbjct: 70  PGLNFRYAPSPSSSLPEKRGGCSD---NANMAAMREMIFRIAVMQPIHIDPESVKPPKRK 129

Query: 125 NVKISTDPQSVAARHRRERISERIRILQRLVPGGTKMDTASMLDEAIHYVKFLKTQVQSL 184
           NV+IS DPQSVAARHRRERISERIRILQRLVPGGTKMDTASMLDEAIHYVKFLK QVQSL
Sbjct: 130 NVRISKDPQSVAARHRRERISERIRILQRLVPGGTKMDTASMLDEAIHYVKFLKKQVQSL 189

Query: 185 -ERAATNRPLPDAAAAAAAAAAPGVGF 202
            E A  N     A A  A A   G G+
Sbjct: 190 EEHAVVNGGGMTAVAGGALAGTVGGGY 208

[Close]

BLAST of CmoCh09G002290 vs. ExPASy Swiss-Prot
Match: Q9FHA7 (Transcription factor HEC1 OS=Arabidopsis thaliana OX=3702 GN=HEC1 PE=1 SV=1)

HSP 1 Score: 172.2 bits (435), Expect = 6.9e-42
Identity = 112/186 (60.22%), Postives = 122/186 (65.59%), Query Frame = 0


Query: 5   MMMQQMEKIPEFYNHLSPPSDHFS--SSTTDPHCLETLQQAAESS---SPPF------TN 64
           MMM QMEK+PEF N   P S  FS   + T P    +    ++ S    P F        
Sbjct: 8   MMMHQMEKLPEFCN---PNSSFFSPDHNNTYPFLFNSTHYQSDHSMTNEPGFRYGSGLLT 67

Query: 65  NLPYNLPQTVPFPTSSRWRNSGGETDLQKQRSVAAMREMIFRIAVMQPIQIDPEAVKPPK 124
           N     P T         RN+    +     ++AAMREMIFRIAVMQPI IDPEAVKPPK
Sbjct: 68  NPSSISPNTAYSSVFLDKRNNSNNNN--NGTNMAAMREMIFRIAVMQPIHIDPEAVKPPK 127

Query: 125 RRNVKISTDPQSVAARHRRERISERIRILQRLVPGGTKMDTASMLDEAIHYVKFLKTQVQ 180
           RRNV+IS DPQSVAARHRRERISERIRILQRLVPGGTKMDTASMLDEAIHYVKFLK QVQ
Sbjct: 128 RRNVRISKDPQSVAARHRRERISERIRILQRLVPGGTKMDTASMLDEAIHYVKFLKKQVQ 187

[Close]

BLAST of CmoCh09G002290 vs. ExPASy Swiss-Prot
Match: Q9LXD8 (Transcription factor HEC3 OS=Arabidopsis thaliana OX=3702 GN=HEC3 PE=1 SV=1)

HSP 1 Score: 137.1 bits (344), Expect = 2.5e-31
Identity = 89/191 (46.60%), Postives = 109/191 (57.07%), Query Frame = 0


Query: 18  NHLSPPSDHFSSSTTDPHCLETLQQAAESSSPPFTNNLPYNLPQTVPFPTSSRWRNSGGE 77
           N+ +   DH      DP  +   Q        PF+++    L  ++   T         E
Sbjct: 24  NNNNKNDDHHHQHNNDPIGMAMDQYTQLHIFNPFSSSHFPPLSSSLTTTTLLSGDQEDDE 83

Query: 78  TDLQKQRSVAAMREMIFRIAVMQPIQIDPEAVKPPKRRNVKISTDPQSVAARHRRERISE 137
            + +    + AM+EM+++IA MQ + IDP  VK PKRRNV+IS DPQSVAARHRRERISE
Sbjct: 84  DEEEPLEELGAMKEMMYKIAAMQSVDIDPATVKKPKRRNVRISDDPQSVAARHRRERISE 143

Query: 138 RIRILQRLVPGGTKMDTASMLDEAIHYVKFLKTQVQSLERAATNRPLPDAAAAAAAAAAP 197
           RIRILQRLVPGGTKMDTASMLDEAI YVKFLK Q++ L       P P    A+ A    
Sbjct: 144 RIRILQRLVPGGTKMDTASMLDEAIRYVKFLKRQIRLLNNNTGYTPPPPQDQASQAVTTS 203

Query: 198 GVGFPLEMSSG 209
            V  P   S G
Sbjct: 204 WVSPPPPPSFG 214

[Close]

BLAST of CmoCh09G002290 vs. ExPASy Swiss-Prot
Match: Q8S3D2 (Transcription factor bHLH87 OS=Arabidopsis thaliana OX=3702 GN=BHLH87 PE=1 SV=1)

HSP 1 Score: 127.5 bits (319), Expect = 2.0e-28
Identity = 74/137 (54.01%), Postives = 98/137 (71.53%), Query Frame = 0


Query: 85  SVAAMREMIFRIAVMQPIQIDPEAVKPPKRRNVKISTDPQSVAARHRRERISERIRILQR 144
           ++A M+EMI+R A  +P+    E V+ PKR+NVKISTDPQ+VAAR RRERISE+IR+LQ 
Sbjct: 241 AIAQMKEMIYRAAAFRPVNFGLEIVEKPKRKNVKISTDPQTVAARQRRERISEKIRVLQT 300

Query: 145 LVPGGTKMDTASMLDEAIHYVKFLKTQVQSLERAATNRPLPDAAAAAAAAAAPGVGFPLE 204
           LVPGGTKMDTASMLDEA +Y+KFL+ QV++LE     RP  D    + ++A     FPL 
Sbjct: 301 LVPGGTKMDTASMLDEAANYLKFLRAQVKALENL---RPKLDQTNLSFSSAP--TSFPL- 360

Query: 205 MSSGSYVPMAKPSQMTH 222
               S++P+  P+Q+ H
Sbjct: 361 -FHPSFLPLQNPNQIHH 370

[Close]

BLAST of CmoCh09G002290 vs. ExPASy Swiss-Prot
Match: O81313 (Transcription factor IND OS=Arabidopsis thaliana OX=3702 GN=IND PE=1 SV=3)

HSP 1 Score: 124.8 bits (312), Expect = 1.3e-27
Identity = 64/100 (64.00%), Postives = 77/100 (77.00%), Query Frame = 0


Query: 77  ETDLQKQRSVAAMREMIFRIAVMQPIQIDPEAVKPPKRRNVKISTDPQSVAARHRRERIS 136
           + D +    + AM+EM + IAVMQP+ IDP  V  P RRNV+IS DPQ+V AR RRERIS
Sbjct: 76  DEDEEYDEDMDAMKEMQYMIAVMQPVDIDPATVPKPNRRNVRISDDPQTVVARRRRERIS 135

Query: 137 ERIRILQRLVPGGTKMDTASMLDEAIHYVKFLKTQVQSLE 177
           E+IRIL+R+VPGG KMDTASMLDEAI Y KFLK QV+ L+
Sbjct: 136 EKIRILKRIVPGGAKMDTASMLDEAIRYTKFLKRQVRILQ 175

[Close]

BLAST of CmoCh09G002290 vs. ExPASy TrEMBL
Match: A0A6J1FE54 (transcription factor HEC2-like OS=Cucurbita moschata OX=3662 GN=LOC111443152 PE=4 SV=1)

HSP 1 Score: 442.6 bits (1137), Expect = 1.0e-120
Identity = 229/229 (100.00%), Postives = 229/229 (100.00%), Query Frame = 0


Query: 1   MEIMMMMQQMEKIPEFYNHLSPPSDHFSSSTTDPHCLETLQQAAESSSPPFTNNLPYNLP 60
           MEIMMMMQQMEKIPEFYNHLSPPSDHFSSSTTDPHCLETLQQAAESSSPPFTNNLPYNLP
Sbjct: 12  MEIMMMMQQMEKIPEFYNHLSPPSDHFSSSTTDPHCLETLQQAAESSSPPFTNNLPYNLP 71

Query: 61  QTVPFPTSSRWRNSGGETDLQKQRSVAAMREMIFRIAVMQPIQIDPEAVKPPKRRNVKIS 120
           QTVPFPTSSRWRNSGGETDLQKQRSVAAMREMIFRIAVMQPIQIDPEAVKPPKRRNVKIS
Sbjct: 72  QTVPFPTSSRWRNSGGETDLQKQRSVAAMREMIFRIAVMQPIQIDPEAVKPPKRRNVKIS 131

Query: 121 TDPQSVAARHRRERISERIRILQRLVPGGTKMDTASMLDEAIHYVKFLKTQVQSLERAAT 180
           TDPQSVAARHRRERISERIRILQRLVPGGTKMDTASMLDEAIHYVKFLKTQVQSLERAAT
Sbjct: 132 TDPQSVAARHRRERISERIRILQRLVPGGTKMDTASMLDEAIHYVKFLKTQVQSLERAAT 191

Query: 181 NRPLPDAAAAAAAAAAPGVGFPLEMSSGSYVPMAKPSQMTHNLEQYGDA 230
           NRPLPDAAAAAAAAAAPGVGFPLEMSSGSYVPMAKPSQMTHNLEQYGDA
Sbjct: 192 NRPLPDAAAAAAAAAAPGVGFPLEMSSGSYVPMAKPSQMTHNLEQYGDA 240

[Close]

BLAST of CmoCh09G002290 vs. ExPASy TrEMBL
Match: A0A6J1IKS0 (transcription factor HEC2-like OS=Cucurbita maxima OX=3661 GN=LOC111476512 PE=4 SV=1)

HSP 1 Score: 426.4 bits (1095), Expect = 7.5e-116
Identity = 222/229 (96.94%), Postives = 223/229 (97.38%), Query Frame = 0


Query: 1   MEIMMMMQQMEKIPEFYNHLSPPSDHFSSSTTDPHCLETLQQAAESSSPPFTNNLPYNLP 60
           MEIMMMMQQMEKIPEFYNHLSPPSDHFSSSTTDPHCLETLQQAAESSSPPFTNNLPYNLP
Sbjct: 12  MEIMMMMQQMEKIPEFYNHLSPPSDHFSSSTTDPHCLETLQQAAESSSPPFTNNLPYNLP 71

Query: 61  QTVPFPTSSRWRNSGGETDLQKQRSVAAMREMIFRIAVMQPIQIDPEAVKPPKRRNVKIS 120
           QTVPFPTSSRWRNSGGETDLQKQRSVAAMREMIFRIAVMQPIQIDPEAVKPPKRRNVKIS
Sbjct: 72  QTVPFPTSSRWRNSGGETDLQKQRSVAAMREMIFRIAVMQPIQIDPEAVKPPKRRNVKIS 131

Query: 121 TDPQSVAARHRRERISERIRILQRLVPGGTKMDTASMLDEAIHYVKFLKTQVQSLERAAT 180
           TDPQSVAARHRRERISERIRILQRLVPGGTKMDTASMLDEAIHYVKFLKTQVQSLERAAT
Sbjct: 132 TDPQSVAARHRRERISERIRILQRLVPGGTKMDTASMLDEAIHYVKFLKTQVQSLERAAT 191

Query: 181 NRPLPDAAAAAAAAAAPGVGFPLEMSSGSYVPMAKPSQMTHNLEQYGDA 230
           NRPLPDAAA A+     GVGFPLEMSSGSYVPMAKPSQMTHNLEQYGDA
Sbjct: 192 NRPLPDAAAPAS-----GVGFPLEMSSGSYVPMAKPSQMTHNLEQYGDA 235

[Close]

BLAST of CmoCh09G002290 vs. ExPASy TrEMBL
Match: A0A5A7V7R5 (Transcription factor HEC2-like OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold134G003280 PE=4 SV=1)

HSP 1 Score: 289.3 bits (739), Expect = 1.4e-74
Identity = 174/229 (75.98%), Postives = 179/229 (78.17%), Query Frame = 0


Query: 1   MEIMMMMQQMEKIPEFYNHLSPPSDHFSSSTTD-PHCLETLQQAAESSSPPF-------T 60
           MEIMMMMQQMEKIPEFYN  SPPS  FSS+TTD PHC         SSSPP         
Sbjct: 1   MEIMMMMQQMEKIPEFYNDFSPPSSDFSSTTTDNPHC-----HLDSSSSPPLFINNNNSN 60

Query: 61  NNLPYNLPQ--TVPFP--TSSRWRNSGG-ETD-LQKQRSVAAMREMIFRIAVMQPIQIDP 120
           NN PYN PQ  TVPFP  + SRWRNSG  ET+ LQKQRSVAAMREMIFRIAVMQPI IDP
Sbjct: 61  NNPPYNFPQQSTVPFPGTSPSRWRNSGSCETESLQKQRSVAAMREMIFRIAVMQPIHIDP 120

Query: 121 EAVKPPKRRNVKISTDPQSVAARHRRERISERIRILQRLVPGGTKMDTASMLDEAIHYVK 180
           EAVKPPKRRNVKISTDPQSVAARHRRERISERIRILQRLVPGGTKMDTASMLDEAIHYVK
Sbjct: 121 EAVKPPKRRNVKISTDPQSVAARHRRERISERIRILQRLVPGGTKMDTASMLDEAIHYVK 180

Query: 181 FLKTQVQSLERAAT---NRPLPDAAAAAAAAAAPGVGFPLEMSSGSYVP 213
           FLKTQVQSLERAA    NRP+           AP VGFPLEMSSGSY+P
Sbjct: 181 FLKTQVQSLERAAVSTGNRPI-------TGGGAPSVGFPLEMSSGSYIP 217

[Close]

BLAST of CmoCh09G002290 vs. ExPASy TrEMBL
Match: A0A1S3BU58 (transcription factor HEC2-like OS=Cucumis melo OX=3656 GN=LOC103493551 PE=4 SV=1)

HSP 1 Score: 289.3 bits (739), Expect = 1.4e-74
Identity = 174/229 (75.98%), Postives = 179/229 (78.17%), Query Frame = 0


Query: 1   MEIMMMMQQMEKIPEFYNHLSPPSDHFSSSTTD-PHCLETLQQAAESSSPPF-------T 60
           MEIMMMMQQMEKIPEFYN  SPPS  FSS+TTD PHC         SSSPP         
Sbjct: 12  MEIMMMMQQMEKIPEFYNDFSPPSSDFSSTTTDNPHC-----HLDSSSSPPLFINNNNSN 71

Query: 61  NNLPYNLPQ--TVPFP--TSSRWRNSGG-ETD-LQKQRSVAAMREMIFRIAVMQPIQIDP 120
           NN PYN PQ  TVPFP  + SRWRNSG  ET+ LQKQRSVAAMREMIFRIAVMQPI IDP
Sbjct: 72  NNPPYNFPQQSTVPFPGTSPSRWRNSGSCETESLQKQRSVAAMREMIFRIAVMQPIHIDP 131

Query: 121 EAVKPPKRRNVKISTDPQSVAARHRRERISERIRILQRLVPGGTKMDTASMLDEAIHYVK 180
           EAVKPPKRRNVKISTDPQSVAARHRRERISERIRILQRLVPGGTKMDTASMLDEAIHYVK
Sbjct: 132 EAVKPPKRRNVKISTDPQSVAARHRRERISERIRILQRLVPGGTKMDTASMLDEAIHYVK 191

Query: 181 FLKTQVQSLERAAT---NRPLPDAAAAAAAAAAPGVGFPLEMSSGSYVP 213
           FLKTQVQSLERAA    NRP+           AP VGFPLEMSSGSY+P
Sbjct: 192 FLKTQVQSLERAAVSTGNRPI-------TGGGAPSVGFPLEMSSGSYIP 228

[Close]

BLAST of CmoCh09G002290 vs. ExPASy TrEMBL
Match: A0A0A0L0B3 (BHLH domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_4G639900 PE=4 SV=1)

HSP 1 Score: 288.1 bits (736), Expect = 3.2e-74
Identity = 175/237 (73.84%), Postives = 184/237 (77.64%), Query Frame = 0


Query: 1   MEIMMMMQQMEKIPEFYNHLSPPSDHFSSSTTD-PHCLETLQQAAESSSPPF-------- 60
           MEIMMMMQQMEKIPEFYN  SPPS  FSS+TTD PHC         SSSPP         
Sbjct: 12  MEIMMMMQQMEKIPEFYNDFSPPSSDFSSTTTDHPHC-----HLDSSSSPPLFINNNSNN 71

Query: 61  -TNNLPYNLPQ--TVPFP--TSSRWRNSGG-ETD-LQKQRSVAAMREMIFRIAVMQPIQI 120
            +NN PYN PQ  TVPFP  +SSRWRNSG  ET+ LQKQRSVAAMREMIFRIAVMQPI I
Sbjct: 72  NSNNPPYNFPQQSTVPFPGTSSSRWRNSGSCETESLQKQRSVAAMREMIFRIAVMQPIHI 131

Query: 121 DPEAVKPPKRRNVKISTDPQSVAARHRRERISERIRILQRLVPGGTKMDTASMLDEAIHY 180
           DPEAVKPPKRRNVKISTDPQSVAARHRRERISERIRILQRLVPGGTKMDTASMLDEAIHY
Sbjct: 132 DPEAVKPPKRRNVKISTDPQSVAARHRRERISERIRILQRLVPGGTKMDTASMLDEAIHY 191

Query: 181 VKFLKTQVQSLERAAT---NRPLPDAAAAAAAAAAPGVGFPLEMSSGSYVPMAKPSQ 219
           VKFLKTQVQSLERAA    NRP+    A ++      VGFPLEMS+GSY+P    SQ
Sbjct: 192 VKFLKTQVQSLERAAVSAGNRPITGVGAPSS------VGFPLEMSTGSYIPNHHQSQ 237

[Close]

BLAST of CmoCh09G002290 vs. NCBI nr
Match: XP_022936595.1 (transcription factor HEC2-like [Cucurbita moschata])

HSP 1 Score: 442.6 bits (1137), Expect = 2.1e-120
Identity = 229/229 (100.00%), Postives = 229/229 (100.00%), Query Frame = 0


Query: 1   MEIMMMMQQMEKIPEFYNHLSPPSDHFSSSTTDPHCLETLQQAAESSSPPFTNNLPYNLP 60
           MEIMMMMQQMEKIPEFYNHLSPPSDHFSSSTTDPHCLETLQQAAESSSPPFTNNLPYNLP
Sbjct: 12  MEIMMMMQQMEKIPEFYNHLSPPSDHFSSSTTDPHCLETLQQAAESSSPPFTNNLPYNLP 71

Query: 61  QTVPFPTSSRWRNSGGETDLQKQRSVAAMREMIFRIAVMQPIQIDPEAVKPPKRRNVKIS 120
           QTVPFPTSSRWRNSGGETDLQKQRSVAAMREMIFRIAVMQPIQIDPEAVKPPKRRNVKIS
Sbjct: 72  QTVPFPTSSRWRNSGGETDLQKQRSVAAMREMIFRIAVMQPIQIDPEAVKPPKRRNVKIS 131

Query: 121 TDPQSVAARHRRERISERIRILQRLVPGGTKMDTASMLDEAIHYVKFLKTQVQSLERAAT 180
           TDPQSVAARHRRERISERIRILQRLVPGGTKMDTASMLDEAIHYVKFLKTQVQSLERAAT
Sbjct: 132 TDPQSVAARHRRERISERIRILQRLVPGGTKMDTASMLDEAIHYVKFLKTQVQSLERAAT 191

Query: 181 NRPLPDAAAAAAAAAAPGVGFPLEMSSGSYVPMAKPSQMTHNLEQYGDA 230
           NRPLPDAAAAAAAAAAPGVGFPLEMSSGSYVPMAKPSQMTHNLEQYGDA
Sbjct: 192 NRPLPDAAAAAAAAAAPGVGFPLEMSSGSYVPMAKPSQMTHNLEQYGDA 240

[Close]

BLAST of CmoCh09G002290 vs. NCBI nr
Match: KAG6591384.1 (Transcription factor HEC2, partial [Cucurbita argyrosperma subsp. sororia])

HSP 1 Score: 433.0 bits (1112), Expect = 1.7e-117
Identity = 226/229 (98.69%), Postives = 227/229 (99.13%), Query Frame = 0


Query: 1   MEIMMMMQQMEKIPEFYNHLSPPSDHFSSSTTDPHCLETLQQAAESSSPPFTNNLPYNLP 60
           MEIMMMMQQMEKIPEFYNHLSPPSDHFSSSTTDPHCLETLQQAAESSSPPFTNNLPYNLP
Sbjct: 1   MEIMMMMQQMEKIPEFYNHLSPPSDHFSSSTTDPHCLETLQQAAESSSPPFTNNLPYNLP 60

Query: 61  QTVPFPTSSRWRNSGGETDLQKQRSVAAMREMIFRIAVMQPIQIDPEAVKPPKRRNVKIS 120
           QTVPFPTSSRWRNSGGETDLQKQRSVAAMREMIFRIAVMQPIQIDPEAVKPPKRRNVKIS
Sbjct: 61  QTVPFPTSSRWRNSGGETDLQKQRSVAAMREMIFRIAVMQPIQIDPEAVKPPKRRNVKIS 120

Query: 121 TDPQSVAARHRRERISERIRILQRLVPGGTKMDTASMLDEAIHYVKFLKTQVQSLERAAT 180
           TDPQSVAARHRRERISERIRILQRLVPGGTKMDTASMLDEAIHYVKFLKTQVQSLERAAT
Sbjct: 121 TDPQSVAARHRRERISERIRILQRLVPGGTKMDTASMLDEAIHYVKFLKTQVQSLERAAT 180

Query: 181 NRPLPDAAAAAAAAAAPGVGFPLEMSSGSYVPMAKPSQMTHNLEQYGDA 230
           NRPLPDAAAAAAAA+  GVGFPLEMSSGSYVPMAKPSQMTHNLEQYGDA
Sbjct: 181 NRPLPDAAAAAAAAS--GVGFPLEMSSGSYVPMAKPSQMTHNLEQYGDA 227

[Close]

BLAST of CmoCh09G002290 vs. NCBI nr
Match: KAG7025068.1 (Transcription factor HEC2, partial [Cucurbita argyrosperma subsp. argyrosperma])

HSP 1 Score: 429.9 bits (1104), Expect = 1.4e-116
Identity = 224/229 (97.82%), Postives = 226/229 (98.69%), Query Frame = 0


Query: 1   MEIMMMMQQMEKIPEFYNHLSPPSDHFSSSTTDPHCLETLQQAAESSSPPFTNNLPYNLP 60
           MEIMMMMQQMEKIPEFYNHLSPPSDHFSSSTTDPHCLETLQQAAESSSPPFTNNLPYNLP
Sbjct: 12  MEIMMMMQQMEKIPEFYNHLSPPSDHFSSSTTDPHCLETLQQAAESSSPPFTNNLPYNLP 71

Query: 61  QTVPFPTSSRWRNSGGETDLQKQRSVAAMREMIFRIAVMQPIQIDPEAVKPPKRRNVKIS 120
           QTVPFPTSSRWRNSGGETDLQKQRSVAAMREMIFRIAVMQPIQIDPEAVKPPKRRNVKIS
Sbjct: 72  QTVPFPTSSRWRNSGGETDLQKQRSVAAMREMIFRIAVMQPIQIDPEAVKPPKRRNVKIS 131

Query: 121 TDPQSVAARHRRERISERIRILQRLVPGGTKMDTASMLDEAIHYVKFLKTQVQSLERAAT 180
           TDPQSVAARHRRERISERIRILQRLVPGGTKMDTASMLDEAIHYVKFLKTQVQSLERAAT
Sbjct: 132 TDPQSVAARHRRERISERIRILQRLVPGGTKMDTASMLDEAIHYVKFLKTQVQSLERAAT 191

Query: 181 NRPLPDAAAAAAAAAAPGVGFPLEMSSGSYVPMAKPSQMTHNLEQYGDA 230
           NRPLPDAAAAAAA+   GVGFPLEMSSGSYVPMAKPSQ+THNLEQYGDA
Sbjct: 192 NRPLPDAAAAAAAS---GVGFPLEMSSGSYVPMAKPSQITHNLEQYGDA 237

[Close]

BLAST of CmoCh09G002290 vs. NCBI nr
Match: XP_023536625.1 (transcription factor HEC2-like [Cucurbita pepo subsp. pepo])

HSP 1 Score: 429.9 bits (1104), Expect = 1.4e-116
Identity = 224/229 (97.82%), Postives = 225/229 (98.25%), Query Frame = 0


Query: 1   MEIMMMMQQMEKIPEFYNHLSPPSDHFSSSTTDPHCLETLQQAAESSSPPFTNNLPYNLP 60
           MEIMMMMQQMEKIPEFYNHLSPPSDHFSSSTTDPHCLETLQQAAESSSPPFTNNLPYNLP
Sbjct: 12  MEIMMMMQQMEKIPEFYNHLSPPSDHFSSSTTDPHCLETLQQAAESSSPPFTNNLPYNLP 71

Query: 61  QTVPFPTSSRWRNSGGETDLQKQRSVAAMREMIFRIAVMQPIQIDPEAVKPPKRRNVKIS 120
           QTVPFPTSSRWRNSGGETDLQKQRSVAAMREMIFRIAVMQPIQIDPEAVKPPKRRNVKIS
Sbjct: 72  QTVPFPTSSRWRNSGGETDLQKQRSVAAMREMIFRIAVMQPIQIDPEAVKPPKRRNVKIS 131

Query: 121 TDPQSVAARHRRERISERIRILQRLVPGGTKMDTASMLDEAIHYVKFLKTQVQSLERAAT 180
           TDPQSVAARHRRERISERIRILQRLVPGGTKMDTASMLDEAIHYVKFLKTQVQSLERAAT
Sbjct: 132 TDPQSVAARHRRERISERIRILQRLVPGGTKMDTASMLDEAIHYVKFLKTQVQSLERAAT 191

Query: 181 NRPLPDAAAAAAAAAAPGVGFPLEMSSGSYVPMAKPSQMTHNLEQYGDA 230
           NRPLPDAAAAAA+    GVGFPLEMSSGSYVPMAKPSQMTHNLEQYGDA
Sbjct: 192 NRPLPDAAAAAAS----GVGFPLEMSSGSYVPMAKPSQMTHNLEQYGDA 236

[Close]

BLAST of CmoCh09G002290 vs. NCBI nr
Match: XP_022975973.1 (transcription factor HEC2-like [Cucurbita maxima])

HSP 1 Score: 426.4 bits (1095), Expect = 1.6e-115
Identity = 222/229 (96.94%), Postives = 223/229 (97.38%), Query Frame = 0


Query: 1   MEIMMMMQQMEKIPEFYNHLSPPSDHFSSSTTDPHCLETLQQAAESSSPPFTNNLPYNLP 60
           MEIMMMMQQMEKIPEFYNHLSPPSDHFSSSTTDPHCLETLQQAAESSSPPFTNNLPYNLP
Sbjct: 12  MEIMMMMQQMEKIPEFYNHLSPPSDHFSSSTTDPHCLETLQQAAESSSPPFTNNLPYNLP 71

Query: 61  QTVPFPTSSRWRNSGGETDLQKQRSVAAMREMIFRIAVMQPIQIDPEAVKPPKRRNVKIS 120
           QTVPFPTSSRWRNSGGETDLQKQRSVAAMREMIFRIAVMQPIQIDPEAVKPPKRRNVKIS
Sbjct: 72  QTVPFPTSSRWRNSGGETDLQKQRSVAAMREMIFRIAVMQPIQIDPEAVKPPKRRNVKIS 131

Query: 121 TDPQSVAARHRRERISERIRILQRLVPGGTKMDTASMLDEAIHYVKFLKTQVQSLERAAT 180
           TDPQSVAARHRRERISERIRILQRLVPGGTKMDTASMLDEAIHYVKFLKTQVQSLERAAT
Sbjct: 132 TDPQSVAARHRRERISERIRILQRLVPGGTKMDTASMLDEAIHYVKFLKTQVQSLERAAT 191

Query: 181 NRPLPDAAAAAAAAAAPGVGFPLEMSSGSYVPMAKPSQMTHNLEQYGDA 230
           NRPLPDAAA A+     GVGFPLEMSSGSYVPMAKPSQMTHNLEQYGDA
Sbjct: 192 NRPLPDAAAPAS-----GVGFPLEMSSGSYVPMAKPSQMTHNLEQYGDA 235

[Close]

BLAST of CmoCh09G002290 vs. TAIR 10
Match: AT3G50330.1 (basic helix-loop-helix (bHLH) DNA-binding superfamily protein )

HSP 1 Score: 186.8 bits (473), Expect = 1.9e-47
Identity = 121/207 (58.45%), Postives = 139/207 (67.15%), Query Frame = 0


Query: 5   MMMQQMEKIPEFYNHLSP-PSDH----FSSSTTDPHCLETLQQAAESSSPPFTNNLPYNL 64
           MMMQQMEK+PE +++ +P P+ H     S S T P            S  PF   +P++ 
Sbjct: 10  MMMQQMEKLPEHFSNSNPNPNPHNIMMLSESNTHPFFFNPTH-----SHLPFDQTMPHHQ 69

Query: 65  P----QTVPFPTSSRWRNSGGETDLQKQRSVAAMREMIFRIAVMQPIQIDPEAVKPPKRR 124
           P    +  P P+SS     GG +D     ++AAMREMIFRIAVMQPI IDPE+VKPPKR+
Sbjct: 70  PGLNFRYAPSPSSSLPEKRGGCSD---NANMAAMREMIFRIAVMQPIHIDPESVKPPKRK 129

Query: 125 NVKISTDPQSVAARHRRERISERIRILQRLVPGGTKMDTASMLDEAIHYVKFLKTQVQSL 184
           NV+IS DPQSVAARHRRERISERIRILQRLVPGGTKMDTASMLDEAIHYVKFLK QVQSL
Sbjct: 130 NVRISKDPQSVAARHRRERISERIRILQRLVPGGTKMDTASMLDEAIHYVKFLKKQVQSL 189

Query: 185 -ERAATNRPLPDAAAAAAAAAAPGVGF 202
            E A  N     A A  A A   G G+
Sbjct: 190 EEHAVVNGGGMTAVAGGALAGTVGGGY 208

[Close]

BLAST of CmoCh09G002290 vs. TAIR 10
Match: AT5G67060.1 (basic helix-loop-helix (bHLH) DNA-binding superfamily protein )

HSP 1 Score: 172.2 bits (435), Expect = 4.9e-43
Identity = 112/186 (60.22%), Postives = 122/186 (65.59%), Query Frame = 0


Query: 5   MMMQQMEKIPEFYNHLSPPSDHFS--SSTTDPHCLETLQQAAESS---SPPF------TN 64
           MMM QMEK+PEF N   P S  FS   + T P    +    ++ S    P F        
Sbjct: 8   MMMHQMEKLPEFCN---PNSSFFSPDHNNTYPFLFNSTHYQSDHSMTNEPGFRYGSGLLT 67

Query: 65  NLPYNLPQTVPFPTSSRWRNSGGETDLQKQRSVAAMREMIFRIAVMQPIQIDPEAVKPPK 124
           N     P T         RN+    +     ++AAMREMIFRIAVMQPI IDPEAVKPPK
Sbjct: 68  NPSSISPNTAYSSVFLDKRNNSNNNN--NGTNMAAMREMIFRIAVMQPIHIDPEAVKPPK 127

Query: 125 RRNVKISTDPQSVAARHRRERISERIRILQRLVPGGTKMDTASMLDEAIHYVKFLKTQVQ 180
           RRNV+IS DPQSVAARHRRERISERIRILQRLVPGGTKMDTASMLDEAIHYVKFLK QVQ
Sbjct: 128 RRNVRISKDPQSVAARHRRERISERIRILQRLVPGGTKMDTASMLDEAIHYVKFLKKQVQ 187

[Close]

BLAST of CmoCh09G002290 vs. TAIR 10
Match: AT5G09750.1 (basic helix-loop-helix (bHLH) DNA-binding superfamily protein )

HSP 1 Score: 137.1 bits (344), Expect = 1.8e-32
Identity = 89/191 (46.60%), Postives = 109/191 (57.07%), Query Frame = 0


Query: 18  NHLSPPSDHFSSSTTDPHCLETLQQAAESSSPPFTNNLPYNLPQTVPFPTSSRWRNSGGE 77
           N+ +   DH      DP  +   Q        PF+++    L  ++   T         E
Sbjct: 24  NNNNKNDDHHHQHNNDPIGMAMDQYTQLHIFNPFSSSHFPPLSSSLTTTTLLSGDQEDDE 83

Query: 78  TDLQKQRSVAAMREMIFRIAVMQPIQIDPEAVKPPKRRNVKISTDPQSVAARHRRERISE 137
            + +    + AM+EM+++IA MQ + IDP  VK PKRRNV+IS DPQSVAARHRRERISE
Sbjct: 84  DEEEPLEELGAMKEMMYKIAAMQSVDIDPATVKKPKRRNVRISDDPQSVAARHRRERISE 143

Query: 138 RIRILQRLVPGGTKMDTASMLDEAIHYVKFLKTQVQSLERAATNRPLPDAAAAAAAAAAP 197
           RIRILQRLVPGGTKMDTASMLDEAI YVKFLK Q++ L       P P    A+ A    
Sbjct: 144 RIRILQRLVPGGTKMDTASMLDEAIRYVKFLKRQIRLLNNNTGYTPPPPQDQASQAVTTS 203

Query: 198 GVGFPLEMSSG 209
            V  P   S G
Sbjct: 204 WVSPPPPPSFG 214

[Close]

BLAST of CmoCh09G002290 vs. TAIR 10
Match: AT3G21330.1 (basic helix-loop-helix (bHLH) DNA-binding superfamily protein )

HSP 1 Score: 127.5 bits (319), Expect = 1.4e-29
Identity = 74/137 (54.01%), Postives = 98/137 (71.53%), Query Frame = 0


Query: 85  SVAAMREMIFRIAVMQPIQIDPEAVKPPKRRNVKISTDPQSVAARHRRERISERIRILQR 144
           ++A M+EMI+R A  +P+    E V+ PKR+NVKISTDPQ+VAAR RRERISE+IR+LQ 
Sbjct: 241 AIAQMKEMIYRAAAFRPVNFGLEIVEKPKRKNVKISTDPQTVAARQRRERISEKIRVLQT 300

Query: 145 LVPGGTKMDTASMLDEAIHYVKFLKTQVQSLERAATNRPLPDAAAAAAAAAAPGVGFPLE 204
           LVPGGTKMDTASMLDEA +Y+KFL+ QV++LE     RP  D    + ++A     FPL 
Sbjct: 301 LVPGGTKMDTASMLDEAANYLKFLRAQVKALENL---RPKLDQTNLSFSSAP--TSFPL- 360

Query: 205 MSSGSYVPMAKPSQMTH 222
               S++P+  P+Q+ H
Sbjct: 361 -FHPSFLPLQNPNQIHH 370

[Close]

BLAST of CmoCh09G002290 vs. TAIR 10
Match: AT4G00120.1 (basic helix-loop-helix (bHLH) DNA-binding superfamily protein )

HSP 1 Score: 124.8 bits (312), Expect = 9.0e-29
Identity = 64/100 (64.00%), Postives = 77/100 (77.00%), Query Frame = 0


Query: 77  ETDLQKQRSVAAMREMIFRIAVMQPIQIDPEAVKPPKRRNVKISTDPQSVAARHRRERIS 136
           + D +    + AM+EM + IAVMQP+ IDP  V  P RRNV+IS DPQ+V AR RRERIS
Sbjct: 76  DEDEEYDEDMDAMKEMQYMIAVMQPVDIDPATVPKPNRRNVRISDDPQTVVARRRRERIS 135

Query: 137 ERIRILQRLVPGGTKMDTASMLDEAIHYVKFLKTQVQSLE 177
           E+IRIL+R+VPGG KMDTASMLDEAI Y KFLK QV+ L+
Sbjct: 136 EKIRILKRIVPGGAKMDTASMLDEAIRYTKFLKRQVRILQ 175

The following BLAST results are available for this feature:

BLAST of CmoCh09G002290 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
Q9SND4	2.7e-46	58.45	Transcription factor HEC2 OS=Arabidopsis thaliana OX=3702 GN=HEC2 PE=1 SV=1	[more]
Q9FHA7	6.9e-42	60.22	Transcription factor HEC1 OS=Arabidopsis thaliana OX=3702 GN=HEC1 PE=1 SV=1	[more]
Q9LXD8	2.5e-31	46.60	Transcription factor HEC3 OS=Arabidopsis thaliana OX=3702 GN=HEC3 PE=1 SV=1	[more]
Q8S3D2	2.0e-28	54.01	Transcription factor bHLH87 OS=Arabidopsis thaliana OX=3702 GN=BHLH87 PE=1 SV=1	[more]
O81313	1.3e-27	64.00	Transcription factor IND OS=Arabidopsis thaliana OX=3702 GN=IND PE=1 SV=3	[more]

BLAST of CmoCh09G002290 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A6J1FE54	1.0e-120	100.00	transcription factor HEC2-like OS=Cucurbita moschata OX=3662 GN=LOC111443152 PE=...	[more]
A0A6J1IKS0	7.5e-116	96.94	transcription factor HEC2-like OS=Cucurbita maxima OX=3661 GN=LOC111476512 PE=4 ...	[more]
A0A5A7V7R5	1.4e-74	75.98	Transcription factor HEC2-like OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_s...	[more]
A0A1S3BU58	1.4e-74	75.98	transcription factor HEC2-like OS=Cucumis melo OX=3656 GN=LOC103493551 PE=4 SV=1	[more]
A0A0A0L0B3	3.2e-74	73.84	BHLH domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_4G639900 PE=4 S...	[more]

BLAST of CmoCh09G002290 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_022936595.1	2.1e-120	100.00	transcription factor HEC2-like [Cucurbita moschata]	[more]
KAG6591384.1	1.7e-117	98.69	Transcription factor HEC2, partial [Cucurbita argyrosperma subsp. sororia]	[more]
KAG7025068.1	1.4e-116	97.82	Transcription factor HEC2, partial [Cucurbita argyrosperma subsp. argyrosperma]	[more]
XP_023536625.1	1.4e-116	97.82	transcription factor HEC2-like [Cucurbita pepo subsp. pepo]	[more]
XP_022975973.1	1.6e-115	96.94	transcription factor HEC2-like [Cucurbita maxima]	[more]

BLAST of CmoCh09G002290 vs. TAIR 10


Match Name	E-value	Identity	Description
AT3G50330.1	1.9e-47	58.45	basic helix-loop-helix (bHLH) DNA-binding superfamily protein	[more]
AT5G67060.1	4.9e-43	60.22	basic helix-loop-helix (bHLH) DNA-binding superfamily protein	[more]
AT5G09750.1	1.8e-32	46.60	basic helix-loop-helix (bHLH) DNA-binding superfamily protein	[more]
AT3G21330.1	1.4e-29	54.01	basic helix-loop-helix (bHLH) DNA-binding superfamily protein	[more]
AT4G00120.1	9.0e-29	64.00	basic helix-loop-helix (bHLH) DNA-binding superfamily protein	[more]

InterPro

Analysis Name: InterPro Annotations of Cucurbita moschata (Rifu) v1
Date Performed: 2021-10-25


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR011598	Myc-type, basic helix-loop-helix (bHLH) domain	SMART	SM00353	finulus	coord: 125..174 e-value: 1.4E-13 score: 61.1
IPR011598	Myc-type, basic helix-loop-helix (bHLH) domain	PFAM	PF00010	HLH	coord: 129..168 e-value: 1.4E-6 score: 28.2
IPR011598	Myc-type, basic helix-loop-helix (bHLH) domain	PROSITE	PS50888	BHLH	coord: 119..168 score: 15.217952
IPR036638	Helix-loop-helix DNA-binding domain superfamily	GENE3D	4.10.280.10		coord: 122..185 e-value: 1.7E-12 score: 49.3
IPR036638	Helix-loop-helix DNA-binding domain superfamily	SUPERFAMILY	47459	HLH, helix-loop-helix DNA-binding domain	coord: 124..177
None	No IPR available	PANTHER	PTHR45914	TRANSCRIPTION FACTOR HEC3-RELATED	coord: 29..220
None	No IPR available	PANTHER	PTHR45914:SF29	BASIC HELIX-LOOP-HELIX (BHLH)-LIKE PROTEIN	coord: 29..220

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
CmoCh09G002290.1	CmoCh09G002290.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
cellular_component	GO:0005634	nucleus
molecular_function	GO:0046983	protein dimerization activity