CmoCh09G001510 (gene) Cucurbita moschata (Rifu) v1

Overview
NameCmoCh09G001510
Typegene
OrganismCucurbita moschata (Cucurbita moschata (Rifu) v1)
DescriptionUnknown protein
LocationCmo_Chr09: 679746 .. 680201 (-)
RNA-Seq ExpressionCmoCh09G001510
SyntenyCmoCh09G001510
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: polypeptideexonCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGATTGCTCTCTCGTCTCTTTTCCTATATTTTGGATCATTGGGAAACAGTAACAGATTTTCCTCTGTTCTTCAATTGGTGTATCGTTCAATTCCTTTATTTGCTACTCTTCATGTGATTCGAGTTGCTCATGTGGATCATGTTGTTTATGTTTAGGGCCTGTGCTTGGGGGCAGTGACTCGGATCGAAAAGAGTAAATCTTTGCAGATAGCCCAATCAGTTCATCTACTGAATGATAAGTATGCCAATTATGTGGGAGTAGAAGACTCAGCAATGGATATTTGGCTCCTTGAGGTTGGACACTCTAGACTTCAATATTAAATAATGAAATGACATGTGCTAGTTTCCTTTTCTAGGTAGGTTGATGTCACTTTTAAGGCCGTCAACATGTATCATGTGGCAAGGAATATTGATATAATGTTCCTCTTGAATGTCTGTGCTTTCAATGTGATTTAG

mRNA sequence

ATGATTGCTCTCTCGTCTCTTTTCCTATATTTTGGATCATTGGGAAACAGTAACAGATTTTCCTCTGTTCTTCAATTGGGCCTGTGCTTGGGGGCAGTGACTCGGATCGAAAAGAGTAAATCTTTGCAGATAGCCCAATCAGTTCATCTACTGAATGATAAGTATGCCAATTATGTGGGAGTAGAAGACTCAGCAATGGATATTTGGCTCCTTGAGGTTGATGTCACTTTTAAGGCCGTCAACATGTATCATGTGGCAAGGAATATTGATATAATGTTCCTCTTGAATGTCTGTGCTTTCAATGTGATTTAG

Coding sequence (CDS)

ATGATTGCTCTCTCGTCTCTTTTCCTATATTTTGGATCATTGGGAAACAGTAACAGATTTTCCTCTGTTCTTCAATTGGGCCTGTGCTTGGGGGCAGTGACTCGGATCGAAAAGAGTAAATCTTTGCAGATAGCCCAATCAGTTCATCTACTGAATGATAAGTATGCCAATTATGTGGGAGTAGAAGACTCAGCAATGGATATTTGGCTCCTTGAGGTTGATGTCACTTTTAAGGCCGTCAACATGTATCATGTGGCAAGGAATATTGATATAATGTTCCTCTTGAATGTCTGTGCTTTCAATGTGATTTAG

Protein sequence

MIALSSLFLYFGSLGNSNRFSSVLQLGLCLGAVTRIEKSKSLQIAQSVHLLNDKYANYVGVEDSAMDIWLLEVDVTFKAVNMYHVARNIDIMFLLNVCAFNVI
Homology
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BLAST of CmoCh09G001510 vs. NCBI nr
Match: KAG7024195.1 (mag1 [Cucurbita argyrosperma subsp. argyrosperma])

HSP 1 Score: 157.1 bits (396), Expect = 7.9e-35
Identity = 82/90 (91.11%), Postives = 83/90 (92.22%), Query Frame = 0 

Query: 14  LGNSNRFSSVL-QLGLCLGAVTRIEKSKSLQIAQSVHLLNDKYANYVGVEDSAMDIWLLE 73
           L    RF SVL + GLCLGAVTRIEKSKSLQIAQSVHLLNDKYANYVGVEDSAMDIWLLE
Sbjct: 367 LNLGKRFGSVLKKFGLCLGAVTRIEKSKSLQIAQSVHLLNDKYANYVGVEDSAMDIWLLE 426

Query: 74  VDVTFKAVNMYHVARNIDIMFLLNVCAFNV 103
           VDVTFKAVNMYHVARNIDIMFLLNVCAFNV
Sbjct: 427 VDVTFKAVNMYHVARNIDIMFLLNVCAFNV 456

The following BLAST results are available for this feature:
BLAST of CmoCh09G001510 vs.
Match NameE-valueIdentityDescription
BLAST of CmoCh09G001510 vs.
Match NameE-valueIdentityDescription
BLAST of CmoCh09G001510 vs. NCBI nr
Match NameE-valueIdentityDescription
KAG7024195.17.9e-3591.11mag1 [Cucurbita argyrosperma subsp. argyrosperma][more]
BLAST of CmoCh09G001510 vs. NCBI nr
Match NameE-valueIdentityDescription
Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
CmoCh09G001510.1CmoCh09G001510.1mRNA