CmoCh09G001120 (gene) Cucurbita moschata (Rifu) v1

Overview


Name	CmoCh09G001120
Type	gene
Organism	Cucurbita moschata (Cucurbita moschata (Rifu) v1)
Description	Auxin responsive SAUR protein
Location	Cmo_Chr09: 530087 .. 530539 (-)
RNA-Seq Expression	CmoCh09G001120
Synteny	CmoCh09G001120

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDSpolypeptide

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGTCGGCCGGACTCGGAAAATGCAGCAAAATCCGCCACATTGTCAGGCTCAGGCAAATGCTCCGACGGTGGCGCAACAAGGCCCGAATGTCTGCTAACCGCATCCCTTCCGACGTACCCGCCGGACATGTGGCTGTCTGCGTTGGAACCAGCTGCCGGCGGTTCGTCGTCAGAGCCACTTACTTGAACCACCCGGTTTTCAAGAAGCTTCTGGTCCAAGCCGAAGAGGAGTACGGGTTCACCAACCAAGGCCCGTTGGCGATCCCTTGCGACGAGTCGGTTTTCGAGGAAGTCATCCGGTTCATCTCCAGATCCGATTCGCCCAACTCGGGGCGGTTCGTGAAATTAGACGAATTTCAAACTTACTGCCATATCGGAATCAGAACCGGCCTCGATTTGTGGCCGGAATCTCGGCCTTTGCTTCATGGGTTAGCCGAGAAATCCATCTGGTAA

mRNA sequence

ATGTCGGCCGGACTCGGAAAATGCAGCAAAATCCGCCACATTGTCAGGCTCAGGCAAATGCTCCGACGGTGGCGCAACAAGGCCCGAATGTCTGCTAACCGCATCCCTTCCGACGTACCCGCCGGACATGTGGCTGTCTGCGTTGGAACCAGCTGCCGGCGGTTCGTCGTCAGAGCCACTTACTTGAACCACCCGGTTTTCAAGAAGCTTCTGGTCCAAGCCGAAGAGGAGTACGGGTTCACCAACCAAGGCCCGTTGGCGATCCCTTGCGACGAGTCGGTTTTCGAGGAAGTCATCCGGTTCATCTCCAGATCCGATTCGCCCAACTCGGGGCGGTTCGTGAAATTAGACGAATTTCAAACTTACTGCCATATCGGAATCAGAACCGGCCTCGATTTGTGGCCGGAATCTCGGCCTTTGCTTCATGGGTTAGCCGAGAAATCCATCTGGTAA

Coding sequence (CDS)

ATGTCGGCCGGACTCGGAAAATGCAGCAAAATCCGCCACATTGTCAGGCTCAGGCAAATGCTCCGACGGTGGCGCAACAAGGCCCGAATGTCTGCTAACCGCATCCCTTCCGACGTACCCGCCGGACATGTGGCTGTCTGCGTTGGAACCAGCTGCCGGCGGTTCGTCGTCAGAGCCACTTACTTGAACCACCCGGTTTTCAAGAAGCTTCTGGTCCAAGCCGAAGAGGAGTACGGGTTCACCAACCAAGGCCCGTTGGCGATCCCTTGCGACGAGTCGGTTTTCGAGGAAGTCATCCGGTTCATCTCCAGATCCGATTCGCCCAACTCGGGGCGGTTCGTGAAATTAGACGAATTTCAAACTTACTGCCATATCGGAATCAGAACCGGCCTCGATTTGTGGCCGGAATCTCGGCCTTTGCTTCATGGGTTAGCCGAGAAATCCATCTGGTAA

Protein sequence

MSAGLGKCSKIRHIVRLRQMLRRWRNKARMSANRIPSDVPAGHVAVCVGTSCRRFVVRATYLNHPVFKKLLVQAEEEYGFTNQGPLAIPCDESVFEEVIRFISRSDSPNSGRFVKLDEFQTYCHIGIRTGLDLWPESRPLLHGLAEKSIW

Homology

[Close]

BLAST of CmoCh09G001120 vs. ExPASy Swiss-Prot
Match: O65695 (Auxin-responsive protein SAUR50 OS=Arabidopsis thaliana OX=3702 GN=SAUR50 PE=1 SV=1)

HSP 1 Score: 75.1 bits (183), Expect = 7.6e-13
Identity = 40/101 (39.60%), Postives = 58/101 (57.43%), Query Frame = 0


Query: 7   KCSKIRHIVRLRQMLRRW-----RNKARMSANRIPSDVPAGHVAVCVGTSCRRFVVRATY 66
           K SK+     L+Q+L+R      +N      + +P DVP GH  V VG +  R++V  ++
Sbjct: 6   KTSKLTQTAMLKQILKRCSSLGKKNGGGYDEDCLPLDVPKGHFPVYVGENRSRYIVPISF 65

Query: 67  LNHPVFKKLLVQAEEEYGFTNQGPLAIPCDESVFEEVIRFI 103
           L HP F+ LL +AEEE+GF +   L IPCDE VF+ +   I
Sbjct: 66  LTHPEFQSLLQRAEEEFGFDHDMGLTIPCDELVFQTLTSMI 106

[Close]

BLAST of CmoCh09G001120 vs. ExPASy Swiss-Prot
Match: O64538 (Auxin-responsive protein SAUR40 OS=Arabidopsis thaliana OX=3702 GN=SAUR40 PE=2 SV=1)

HSP 1 Score: 74.3 bits (181), Expect = 1.3e-12
Identity = 35/65 (53.85%), Postives = 45/65 (69.23%), Query Frame = 0


Query: 35  IPSDVPAGHVAVCVGTSCRRFVVRATYLNHPVFKKLLVQAEEEYGFTNQGPLAIPCDESV 94
           + S VP+GHV V VG    RFVV A  LNHPVF  LL ++ +EYG+T +G L IPC+  V
Sbjct: 44  VASSVPSGHVPVNVGEDKERFVVSAELLNHPVFVGLLNRSAQEYGYTQKGVLHIPCNVFV 103

Query: 95  FEEVI 100
           FE+V+
Sbjct: 104 FEQVV 108

[Close]

BLAST of CmoCh09G001120 vs. ExPASy Swiss-Prot
Match: P33083 (Auxin-induced protein 6B OS=Glycine max OX=3847 PE=2 SV=1)

HSP 1 Score: 73.9 bits (180), Expect = 1.7e-12
Identity = 39/81 (48.15%), Postives = 52/81 (64.20%), Query Frame = 0


Query: 27  KARMSANRIPS---DVPAGHVAVCVGTSCRRFVVRATYLNHPVFKKLLVQAEEEYGFTN- 86
           KA  SAN+  S   DV  G++AV VG   RRFV+  +YLN P F+ LL QAEEE+G+ + 
Sbjct: 10  KASFSANQASSKAVDVEKGYLAVYVGEKMRRFVIPVSYLNKPSFQDLLSQAEEEFGYHHP 69

Query: 87  QGPLAIPCDESVFEEVIRFIS 104
            G L IPC E VF+ +  F++
Sbjct: 70  NGGLTIPCSEDVFQHITSFLN 90

[Close]

BLAST of CmoCh09G001120 vs. ExPASy Swiss-Prot
Match: Q9SGU2 (Auxin-responsive protein SAUR71 OS=Arabidopsis thaliana OX=3702 GN=SAUR71 PE=2 SV=1)

HSP 1 Score: 73.9 bits (180), Expect = 1.7e-12
Identity = 38/80 (47.50%), Postives = 46/80 (57.50%), Query Frame = 0


Query: 20  MLRRWRNKARMSANRIPSDVPAGHVAVCVGTSCRRFVVRATYLNHPVFKKLLVQAEEEYG 79
           +LR    + R    +  S VP GHV V VG    RFVV A  LNHPVF  LL Q+ +EYG
Sbjct: 19  LLRSESQRGRTKKEKHKSWVPEGHVPVYVGHEMERFVVNAELLNHPVFVALLKQSAQEYG 78

Query: 80  FTNQGPLAIPCDESVFEEVI 100
           +  QG L IPC   VFE ++
Sbjct: 79  YEQQGVLRIPCHVLVFERIL 98

[Close]

BLAST of CmoCh09G001120 vs. ExPASy Swiss-Prot
Match: Q9SA49 (Auxin-responsive protein SAUR41 OS=Arabidopsis thaliana OX=3702 GN=SAUR41 PE=2 SV=1)

HSP 1 Score: 70.9 bits (172), Expect = 1.4e-11
Identity = 34/73 (46.58%), Postives = 43/73 (58.90%), Query Frame = 0


Query: 39  VPAGHVAVCVGTSCRRFVVRATYLNHPVFKKLLVQAEEEYGFTNQGPLAIPCDESVFEEV 98
           VPAGHV V VG    RFVV A  +NHP+F  LL ++ +EYG+  +G L IPC   VFE V
Sbjct: 54  VPAGHVPVYVGEEMERFVVSAELMNHPIFVGLLNRSAQEYGYAQKGVLHIPCHVIVFERV 113

Query: 99  IRFISRSDSPNSG 112
           +  +       SG
Sbjct: 114 VETLRLGGFEGSG 126

[Close]

BLAST of CmoCh09G001120 vs. ExPASy TrEMBL
Match: A0A6J1F8H9 (auxin-induced protein 6B OS=Cucurbita moschata OX=3662 GN=LOC111443278 PE=3 SV=1)

HSP 1 Score: 316.2 bits (809), Expect = 7.2e-83
Identity = 150/150 (100.00%), Postives = 150/150 (100.00%), Query Frame = 0


Query: 1   MSAGLGKCSKIRHIVRLRQMLRRWRNKARMSANRIPSDVPAGHVAVCVGTSCRRFVVRAT 60
           MSAGLGKCSKIRHIVRLRQMLRRWRNKARMSANRIPSDVPAGHVAVCVGTSCRRFVVRAT
Sbjct: 1   MSAGLGKCSKIRHIVRLRQMLRRWRNKARMSANRIPSDVPAGHVAVCVGTSCRRFVVRAT 60

Query: 61  YLNHPVFKKLLVQAEEEYGFTNQGPLAIPCDESVFEEVIRFISRSDSPNSGRFVKLDEFQ 120
           YLNHPVFKKLLVQAEEEYGFTNQGPLAIPCDESVFEEVIRFISRSDSPNSGRFVKLDEFQ
Sbjct: 61  YLNHPVFKKLLVQAEEEYGFTNQGPLAIPCDESVFEEVIRFISRSDSPNSGRFVKLDEFQ 120

Query: 121 TYCHIGIRTGLDLWPESRPLLHGLAEKSIW 151
           TYCHIGIRTGLDLWPESRPLLHGLAEKSIW
Sbjct: 121 TYCHIGIRTGLDLWPESRPLLHGLAEKSIW 150

[Close]

BLAST of CmoCh09G001120 vs. ExPASy TrEMBL
Match: A0A6J1IP24 (auxin-induced protein 6B OS=Cucurbita maxima OX=3661 GN=LOC111476970 PE=3 SV=1)

HSP 1 Score: 312.8 bits (800), Expect = 7.9e-82
Identity = 148/150 (98.67%), Postives = 149/150 (99.33%), Query Frame = 0


Query: 1   MSAGLGKCSKIRHIVRLRQMLRRWRNKARMSANRIPSDVPAGHVAVCVGTSCRRFVVRAT 60
           MSAGLGKCSKIRHIVRLRQMLRRWRNKARMSANRIPSDVPAGHVAVCVGTSCRRFVVRA 
Sbjct: 1   MSAGLGKCSKIRHIVRLRQMLRRWRNKARMSANRIPSDVPAGHVAVCVGTSCRRFVVRAA 60

Query: 61  YLNHPVFKKLLVQAEEEYGFTNQGPLAIPCDESVFEEVIRFISRSDSPNSGRFVKLDEFQ 120
           YLNHPVFKKLLVQAEEEYGFTNQGPLAIPCDESVFEEVIRFISRSDSPNSGRFVKLDEFQ
Sbjct: 61  YLNHPVFKKLLVQAEEEYGFTNQGPLAIPCDESVFEEVIRFISRSDSPNSGRFVKLDEFQ 120

Query: 121 TYCHIGIRTGLDLWPESRPLLHGLAEKSIW 151
           T+CHIGIRTGLDLWPESRPLLHGLAEKSIW
Sbjct: 121 TFCHIGIRTGLDLWPESRPLLHGLAEKSIW 150

[Close]

BLAST of CmoCh09G001120 vs. ExPASy TrEMBL
Match: A0A5D3E601 (Auxin-induced protein 6B OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold455G008210 PE=3 SV=1)

HSP 1 Score: 307.8 bits (787), Expect = 2.6e-80
Identity = 145/150 (96.67%), Postives = 149/150 (99.33%), Query Frame = 0


Query: 1   MSAGLGKCSKIRHIVRLRQMLRRWRNKARMSANRIPSDVPAGHVAVCVGTSCRRFVVRAT 60
           MSAGLGKCSKIRHIVRLRQMLRRWRNKARMSANRIPSDVPAGHVAVCVGTS RRFVVRAT
Sbjct: 1   MSAGLGKCSKIRHIVRLRQMLRRWRNKARMSANRIPSDVPAGHVAVCVGTSSRRFVVRAT 60

Query: 61  YLNHPVFKKLLVQAEEEYGFTNQGPLAIPCDESVFEEVIRFISRSDSPNSGRFVKLDEFQ 120
           YLNHPVFKKLL+QAEEEYGFTNQGPLAIPCDESVFEEVIRFISRS+SPNSGRFVKLD+FQ
Sbjct: 61  YLNHPVFKKLLIQAEEEYGFTNQGPLAIPCDESVFEEVIRFISRSESPNSGRFVKLDDFQ 120

Query: 121 TYCHIGIRTGLDLWPESRPLLHGLAEKSIW 151
           +YCHIGIRTGLDLWPESRPLLHGLAEKSIW
Sbjct: 121 SYCHIGIRTGLDLWPESRPLLHGLAEKSIW 150

[Close]

BLAST of CmoCh09G001120 vs. ExPASy TrEMBL
Match: A0A1S3CRK3 (auxin-induced protein 6B OS=Cucumis melo OX=3656 GN=LOC103503890 PE=3 SV=1)

HSP 1 Score: 307.8 bits (787), Expect = 2.6e-80
Identity = 145/150 (96.67%), Postives = 149/150 (99.33%), Query Frame = 0


Query: 1   MSAGLGKCSKIRHIVRLRQMLRRWRNKARMSANRIPSDVPAGHVAVCVGTSCRRFVVRAT 60
           MSAGLGKCSKIRHIVRLRQMLRRWRNKARMSANRIPSDVPAGHVAVCVGTS RRFVVRAT
Sbjct: 1   MSAGLGKCSKIRHIVRLRQMLRRWRNKARMSANRIPSDVPAGHVAVCVGTSSRRFVVRAT 60

Query: 61  YLNHPVFKKLLVQAEEEYGFTNQGPLAIPCDESVFEEVIRFISRSDSPNSGRFVKLDEFQ 120
           YLNHPVFKKLL+QAEEEYGFTNQGPLAIPCDESVFEEVIRFISRS+SPNSGRFVKLD+FQ
Sbjct: 61  YLNHPVFKKLLIQAEEEYGFTNQGPLAIPCDESVFEEVIRFISRSESPNSGRFVKLDDFQ 120

Query: 121 TYCHIGIRTGLDLWPESRPLLHGLAEKSIW 151
           +YCHIGIRTGLDLWPESRPLLHGLAEKSIW
Sbjct: 121 SYCHIGIRTGLDLWPESRPLLHGLAEKSIW 150

[Close]

BLAST of CmoCh09G001120 vs. ExPASy TrEMBL
Match: A0A0A0LDJ7 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_3G866530 PE=3 SV=1)

HSP 1 Score: 303.9 bits (777), Expect = 3.7e-79
Identity = 145/149 (97.32%), Postives = 148/149 (99.33%), Query Frame = 0


Query: 1   MSAGLGKCSKIRHIVRLRQMLRRWRNKARMSANRIPSDVPAGHVAVCVGTSCRRFVVRAT 60
           MSAGLGKCSKIRHIVRLRQMLRRWRNKARMSANRIPSDVPAGHVAVCVGTS RRFVVRAT
Sbjct: 1   MSAGLGKCSKIRHIVRLRQMLRRWRNKARMSANRIPSDVPAGHVAVCVGTSSRRFVVRAT 60

Query: 61  YLNHPVFKKLLVQAEEEYGFTNQGPLAIPCDESVFEEVIRFISRSDSPNSGRFVKLDEFQ 120
           YLNHPVFKKLLVQAEEEYGFTNQGPLAIPCDESVFEEVIRFISRS+SPNSGRFVKLD+FQ
Sbjct: 61  YLNHPVFKKLLVQAEEEYGFTNQGPLAIPCDESVFEEVIRFISRSESPNSGRFVKLDDFQ 120

Query: 121 TYCHIGIRTGLDLWPESRPLLHGLAEKSI 150
           +YCHIGIRTGLDLWPESRPLLHGLAEKSI
Sbjct: 121 SYCHIGIRTGLDLWPESRPLLHGLAEKSI 149

[Close]

BLAST of CmoCh09G001120 vs. NCBI nr
Match: XP_022936801.1 (auxin-induced protein 6B [Cucurbita moschata] >KAG6591279.1 Auxin-responsive protein SAUR50, partial [Cucurbita argyrosperma subsp. sororia])

HSP 1 Score: 316.2 bits (809), Expect = 1.5e-82
Identity = 150/150 (100.00%), Postives = 150/150 (100.00%), Query Frame = 0


Query: 1   MSAGLGKCSKIRHIVRLRQMLRRWRNKARMSANRIPSDVPAGHVAVCVGTSCRRFVVRAT 60
           MSAGLGKCSKIRHIVRLRQMLRRWRNKARMSANRIPSDVPAGHVAVCVGTSCRRFVVRAT
Sbjct: 1   MSAGLGKCSKIRHIVRLRQMLRRWRNKARMSANRIPSDVPAGHVAVCVGTSCRRFVVRAT 60

Query: 61  YLNHPVFKKLLVQAEEEYGFTNQGPLAIPCDESVFEEVIRFISRSDSPNSGRFVKLDEFQ 120
           YLNHPVFKKLLVQAEEEYGFTNQGPLAIPCDESVFEEVIRFISRSDSPNSGRFVKLDEFQ
Sbjct: 61  YLNHPVFKKLLVQAEEEYGFTNQGPLAIPCDESVFEEVIRFISRSDSPNSGRFVKLDEFQ 120

Query: 121 TYCHIGIRTGLDLWPESRPLLHGLAEKSIW 151
           TYCHIGIRTGLDLWPESRPLLHGLAEKSIW
Sbjct: 121 TYCHIGIRTGLDLWPESRPLLHGLAEKSIW 150

[Close]

BLAST of CmoCh09G001120 vs. NCBI nr
Match: XP_023535898.1 (auxin-induced protein 6B [Cucurbita pepo subsp. pepo])

HSP 1 Score: 315.1 bits (806), Expect = 3.3e-82
Identity = 149/150 (99.33%), Postives = 150/150 (100.00%), Query Frame = 0


Query: 1   MSAGLGKCSKIRHIVRLRQMLRRWRNKARMSANRIPSDVPAGHVAVCVGTSCRRFVVRAT 60
           MSAG+GKCSKIRHIVRLRQMLRRWRNKARMSANRIPSDVPAGHVAVCVGTSCRRFVVRAT
Sbjct: 1   MSAGVGKCSKIRHIVRLRQMLRRWRNKARMSANRIPSDVPAGHVAVCVGTSCRRFVVRAT 60

Query: 61  YLNHPVFKKLLVQAEEEYGFTNQGPLAIPCDESVFEEVIRFISRSDSPNSGRFVKLDEFQ 120
           YLNHPVFKKLLVQAEEEYGFTNQGPLAIPCDESVFEEVIRFISRSDSPNSGRFVKLDEFQ
Sbjct: 61  YLNHPVFKKLLVQAEEEYGFTNQGPLAIPCDESVFEEVIRFISRSDSPNSGRFVKLDEFQ 120

Query: 121 TYCHIGIRTGLDLWPESRPLLHGLAEKSIW 151
           TYCHIGIRTGLDLWPESRPLLHGLAEKSIW
Sbjct: 121 TYCHIGIRTGLDLWPESRPLLHGLAEKSIW 150

[Close]

BLAST of CmoCh09G001120 vs. NCBI nr
Match: XP_022976624.1 (auxin-induced protein 6B [Cucurbita maxima])

HSP 1 Score: 312.8 bits (800), Expect = 1.6e-81
Identity = 148/150 (98.67%), Postives = 149/150 (99.33%), Query Frame = 0


Query: 1   MSAGLGKCSKIRHIVRLRQMLRRWRNKARMSANRIPSDVPAGHVAVCVGTSCRRFVVRAT 60
           MSAGLGKCSKIRHIVRLRQMLRRWRNKARMSANRIPSDVPAGHVAVCVGTSCRRFVVRA 
Sbjct: 1   MSAGLGKCSKIRHIVRLRQMLRRWRNKARMSANRIPSDVPAGHVAVCVGTSCRRFVVRAA 60

Query: 61  YLNHPVFKKLLVQAEEEYGFTNQGPLAIPCDESVFEEVIRFISRSDSPNSGRFVKLDEFQ 120
           YLNHPVFKKLLVQAEEEYGFTNQGPLAIPCDESVFEEVIRFISRSDSPNSGRFVKLDEFQ
Sbjct: 61  YLNHPVFKKLLVQAEEEYGFTNQGPLAIPCDESVFEEVIRFISRSDSPNSGRFVKLDEFQ 120

Query: 121 TYCHIGIRTGLDLWPESRPLLHGLAEKSIW 151
           T+CHIGIRTGLDLWPESRPLLHGLAEKSIW
Sbjct: 121 TFCHIGIRTGLDLWPESRPLLHGLAEKSIW 150

[Close]

BLAST of CmoCh09G001120 vs. NCBI nr
Match: XP_038899268.1 (auxin-induced protein 6B-like [Benincasa hispida])

HSP 1 Score: 310.1 bits (793), Expect = 1.1e-80
Identity = 145/150 (96.67%), Postives = 150/150 (100.00%), Query Frame = 0


Query: 1   MSAGLGKCSKIRHIVRLRQMLRRWRNKARMSANRIPSDVPAGHVAVCVGTSCRRFVVRAT 60
           MSAGLGKCSKIRHIVRLRQMLRRWRNKARMSANRIPSDVPAGHVAVCVGTSCRRFVVRAT
Sbjct: 1   MSAGLGKCSKIRHIVRLRQMLRRWRNKARMSANRIPSDVPAGHVAVCVGTSCRRFVVRAT 60

Query: 61  YLNHPVFKKLLVQAEEEYGFTNQGPLAIPCDESVFEEVIRFISRSDSPNSGRFVKLDEFQ 120
           YLNHP+FKKLLVQAEEEYGFTNQGPLAIPC+ESVFEEVIRFISRS+SPNSGRFVKLD+FQ
Sbjct: 61  YLNHPIFKKLLVQAEEEYGFTNQGPLAIPCEESVFEEVIRFISRSESPNSGRFVKLDDFQ 120

Query: 121 TYCHIGIRTGLDLWPESRPLLHGLAEKSIW 151
           +YCHIGIRTGLDLWPESRPLLHGLAEKSIW
Sbjct: 121 SYCHIGIRTGLDLWPESRPLLHGLAEKSIW 150

[Close]

BLAST of CmoCh09G001120 vs. NCBI nr
Match: XP_011652445.1 (auxin-induced protein 6B [Cucumis sativus])

HSP 1 Score: 308.1 bits (788), Expect = 4.0e-80
Identity = 146/150 (97.33%), Postives = 149/150 (99.33%), Query Frame = 0


Query: 1   MSAGLGKCSKIRHIVRLRQMLRRWRNKARMSANRIPSDVPAGHVAVCVGTSCRRFVVRAT 60
           MSAGLGKCSKIRHIVRLRQMLRRWRNKARMSANRIPSDVPAGHVAVCVGTS RRFVVRAT
Sbjct: 1   MSAGLGKCSKIRHIVRLRQMLRRWRNKARMSANRIPSDVPAGHVAVCVGTSSRRFVVRAT 60

Query: 61  YLNHPVFKKLLVQAEEEYGFTNQGPLAIPCDESVFEEVIRFISRSDSPNSGRFVKLDEFQ 120
           YLNHPVFKKLLVQAEEEYGFTNQGPLAIPCDESVFEEVIRFISRS+SPNSGRFVKLD+FQ
Sbjct: 61  YLNHPVFKKLLVQAEEEYGFTNQGPLAIPCDESVFEEVIRFISRSESPNSGRFVKLDDFQ 120

Query: 121 TYCHIGIRTGLDLWPESRPLLHGLAEKSIW 151
           +YCHIGIRTGLDLWPESRPLLHGLAEKSIW
Sbjct: 121 SYCHIGIRTGLDLWPESRPLLHGLAEKSIW 150

[Close]

BLAST of CmoCh09G001120 vs. TAIR 10
Match: AT1G75590.1 (SAUR-like auxin-responsive protein family )

HSP 1 Score: 236.5 bits (602), Expect = 1.4e-62
Identity = 114/154 (74.03%), Postives = 131/154 (85.06%), Query Frame = 0


Query: 1   MSAGLGKCSKIRHIVRLRQMLRRWRNKARMSAN---RIPSDVPAGHVAVCVGTSCRRFVV 60
           M+ GLGKCSKIRHIVRLRQMLRRWR++ARMS++    +PSDVP+GHVAV VG+SCRRFVV
Sbjct: 1   MAGGLGKCSKIRHIVRLRQMLRRWRDQARMSSSFSRCVPSDVPSGHVAVYVGSSCRRFVV 60

Query: 61  RATYLNHPVFKKLLVQAEEEYGFTNQGPLAIPCDESVFEEVIRFISRSDSPNSGRFVKLD 120
           RATYLNHPV + LLVQAEEE+GF NQGPL IPC+ESVFEE IRFISRSDS  S RF   D
Sbjct: 61  RATYLNHPVLRNLLVQAEEEFGFVNQGPLVIPCEESVFEESIRFISRSDSTRSRRFTCPD 120

Query: 121 EFQTYCH-IGIRTGLDLWPESRPLLHGLAEKSIW 151
           +FQ  CH +GIR+ LDLW ESRPLLHG+ EK++W
Sbjct: 121 DFQKNCHVVGIRSKLDLWIESRPLLHGVTEKAVW 154

[Close]

BLAST of CmoCh09G001120 vs. TAIR 10
Match: AT1G19840.1 (SAUR-like auxin-responsive protein family )

HSP 1 Score: 218.8 bits (556), Expect = 3.0e-57
Identity = 109/154 (70.78%), Postives = 125/154 (81.17%), Query Frame = 0


Query: 1   MSAGLGKCSKIRHIVRLRQMLRRWRNKARMS--ANRIPSDVPAGHVAVCVGTSCRRFVVR 60
           M+  L KCSKIRHIVRLRQMLRRWRNKAR+S  +  +PSDVP+GHVAVCVG+ CRRFVVR
Sbjct: 1   MAGSLVKCSKIRHIVRLRQMLRRWRNKARLSSVSRCVPSDVPSGHVAVCVGSGCRRFVVR 60

Query: 61  ATYLNHPVFKKLLVQAEEEYGFTNQGPLAIPCDESVFEEVIRFISRSDSPNSGRFVKLDE 120
           A+YLNHP+   LLVQAEEE+GF NQGPL IPC+ESVFEE IRFISRSDS  S RF   D+
Sbjct: 61  ASYLNHPIISNLLVQAEEEFGFANQGPLVIPCEESVFEEAIRFISRSDSSRSSRFTCPDD 120

Query: 121 FQTYCH--IGIRTGLDLWPESRPLLHGLAEKSIW 151
            Q  C+  I I++ LDL  ESRPLLHG+AEK+IW
Sbjct: 121 LQK-CNGGIKIKSKLDLMIESRPLLHGVAEKAIW 153

[Close]

BLAST of CmoCh09G001120 vs. TAIR 10
Match: AT5G10990.1 (SAUR-like auxin-responsive protein family )

HSP 1 Score: 206.1 bits (523), Expect = 2.0e-53
Identity = 103/151 (68.21%), Postives = 121/151 (80.13%), Query Frame = 0


Query: 1   MSAGLGKCSKIRHIVRLRQMLRRWRNKARMSANR--IPSDVPAGHVAVCVGTSCRRFVVR 60
           M+ G+GKCSKIRHIV+LRQMLR+WRNKARMS+ R  +PSDVP+GHVAV VG SCRRFVV 
Sbjct: 1   MAGGIGKCSKIRHIVKLRQMLRQWRNKARMSSVRRSVPSDVPSGHVAVYVGRSCRRFVVL 60

Query: 61  ATYLNHPVFKKLLVQAEEEYGFTNQGPLAIPCDESVFEEVIRFISRSDSPNSGRFVKLDE 120
           ATYLNHP+   LLV+AEEE+GF NQGPL IPC+ESVFEE IRFI+R     S RF   D+
Sbjct: 61  ATYLNHPILMNLLVKAEEEFGFANQGPLVIPCEESVFEESIRFITR-----SSRFTCTDD 120

Query: 121 FQTYCHIGIRTGLDLWPESRPLLHGLAEKSI 150
            +   H GIR+ LDL  ESRPLLHG++EK+I
Sbjct: 121 LKKNRHGGIRSKLDLLMESRPLLHGVSEKAI 146

[Close]

BLAST of CmoCh09G001120 vs. TAIR 10
Match: AT4G34750.1 (SAUR-like auxin-responsive protein family )

HSP 1 Score: 152.5 bits (384), Expect = 2.6e-37
Identity = 80/152 (52.63%), Postives = 110/152 (72.37%), Query Frame = 0


Query: 5   LGKCSKIRHIVRLRQMLRRWRNKARM-SANRIP-SDVPAGHVAVCVGTSCRRFVVRATYL 64
           +GK +KI  +VR+RQML++W+ KA + S+N  P SDVP GHVAV VG + RR+VVRA +L
Sbjct: 1   MGKNNKIGSVVRIRQMLKQWQKKAHIGSSNNDPVSDVPPGHVAVSVGENRRRYVVRAKHL 60

Query: 65  NHPVFKKLLVQAEEEYGFTNQGPLAIPCDESVFEEVIRFISRSD-SPNSGR----FVKLD 124
           NHP+F++LL +AEEEYGF N GPLAIPCDES+FE++I  ++R + S +SGR       L+
Sbjct: 61  NHPIFRRLLAEAEEEYGFANVGPLAIPCDESLFEDIIAIVTRCESSSSSGRGNPPAATLE 120

Query: 125 EFQTYCHIGIRTGLDLWPESRPLLHGLAEKSI 150
           + +   H+G+        ESRPLL G+AEKS+
Sbjct: 121 DLRRCSHVGLAKNN---VESRPLLPGIAEKSV 149

[Close]

BLAST of CmoCh09G001120 vs. TAIR 10
Match: AT4G34750.2 (SAUR-like auxin-responsive protein family )

HSP 1 Score: 152.5 bits (384), Expect = 2.6e-37
Identity = 80/152 (52.63%), Postives = 110/152 (72.37%), Query Frame = 0


Query: 5   LGKCSKIRHIVRLRQMLRRWRNKARM-SANRIP-SDVPAGHVAVCVGTSCRRFVVRATYL 64
           +GK +KI  +VR+RQML++W+ KA + S+N  P SDVP GHVAV VG + RR+VVRA +L
Sbjct: 1   MGKNNKIGSVVRIRQMLKQWQKKAHIGSSNNDPVSDVPPGHVAVSVGENRRRYVVRAKHL 60

Query: 65  NHPVFKKLLVQAEEEYGFTNQGPLAIPCDESVFEEVIRFISRSD-SPNSGR----FVKLD 124
           NHP+F++LL +AEEEYGF N GPLAIPCDES+FE++I  ++R + S +SGR       L+
Sbjct: 61  NHPIFRRLLAEAEEEYGFANVGPLAIPCDESLFEDIIAIVTRCESSSSSGRGNPPAATLE 120

Query: 125 EFQTYCHIGIRTGLDLWPESRPLLHGLAEKSI 150
           + +   H+G+        ESRPLL G+AEKS+
Sbjct: 121 DLRRCSHVGLAKNN---VESRPLLPGIAEKSV 149

The following BLAST results are available for this feature:

BLAST of CmoCh09G001120 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
O65695	7.6e-13	39.60	Auxin-responsive protein SAUR50 OS=Arabidopsis thaliana OX=3702 GN=SAUR50 PE=1 S...	[more]
O64538	1.3e-12	53.85	Auxin-responsive protein SAUR40 OS=Arabidopsis thaliana OX=3702 GN=SAUR40 PE=2 S...	[more]
P33083	1.7e-12	48.15	Auxin-induced protein 6B OS=Glycine max OX=3847 PE=2 SV=1	[more]
Q9SGU2	1.7e-12	47.50	Auxin-responsive protein SAUR71 OS=Arabidopsis thaliana OX=3702 GN=SAUR71 PE=2 S...	[more]
Q9SA49	1.4e-11	46.58	Auxin-responsive protein SAUR41 OS=Arabidopsis thaliana OX=3702 GN=SAUR41 PE=2 S...	[more]

BLAST of CmoCh09G001120 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A6J1F8H9	7.2e-83	100.00	auxin-induced protein 6B OS=Cucurbita moschata OX=3662 GN=LOC111443278 PE=3 SV=1	[more]
A0A6J1IP24	7.9e-82	98.67	auxin-induced protein 6B OS=Cucurbita maxima OX=3661 GN=LOC111476970 PE=3 SV=1	[more]
A0A5D3E601	2.6e-80	96.67	Auxin-induced protein 6B OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffol...	[more]
A0A1S3CRK3	2.6e-80	96.67	auxin-induced protein 6B OS=Cucumis melo OX=3656 GN=LOC103503890 PE=3 SV=1	[more]
A0A0A0LDJ7	3.7e-79	97.32	Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_3G866530 PE=3 SV=1	[more]

BLAST of CmoCh09G001120 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_022936801.1	1.5e-82	100.00	auxin-induced protein 6B [Cucurbita moschata] >KAG6591279.1 Auxin-responsive pro...	[more]
XP_023535898.1	3.3e-82	99.33	auxin-induced protein 6B [Cucurbita pepo subsp. pepo]	[more]
XP_022976624.1	1.6e-81	98.67	auxin-induced protein 6B [Cucurbita maxima]	[more]
XP_038899268.1	1.1e-80	96.67	auxin-induced protein 6B-like [Benincasa hispida]	[more]
XP_011652445.1	4.0e-80	97.33	auxin-induced protein 6B [Cucumis sativus]	[more]

BLAST of CmoCh09G001120 vs. TAIR 10


Match Name	E-value	Identity	Description
AT1G75590.1	1.4e-62	74.03	SAUR-like auxin-responsive protein family	[more]
AT1G19840.1	3.0e-57	70.78	SAUR-like auxin-responsive protein family	[more]
AT5G10990.1	2.0e-53	68.21	SAUR-like auxin-responsive protein family	[more]
AT4G34750.1	2.6e-37	52.63	SAUR-like auxin-responsive protein family	[more]
AT4G34750.2	2.6e-37	52.63	SAUR-like auxin-responsive protein family	[more]

InterPro

Analysis Name: InterPro Annotations of Cucurbita moschata (Rifu) v1
Date Performed: 2021-10-25


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR003676	Small auxin-up RNA	PFAM	PF02519	Auxin_inducible	coord: 16..101 e-value: 8.2E-31 score: 106.0
None	No IPR available	PANTHER	PTHR31374	AUXIN-INDUCED PROTEIN-LIKE-RELATED	coord: 6..143
None	No IPR available	PANTHER	PTHR31374:SF183	SMALL AUXIN-UP RNA-RELATED	coord: 6..143

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
CmoCh09G001120.1	CmoCh09G001120.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0009733	response to auxin