CmoCh09G001080 (gene) Cucurbita moschata (Rifu) v1

Overview


Name	CmoCh09G001080
Type	gene
Organism	Cucurbita moschata (Cucurbita moschata (Rifu) v1)
Description	protein SPA, chloroplastic
Location	Cmo_Chr09: 506922 .. 509528 (+)
RNA-Seq Expression	CmoCh09G001080
Synteny	CmoCh09G001080

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDSpolypeptidethree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGGTGGTGGGTCTGTAGCACAACAGAGGCAGCCAATAACGGATATCCAAATCCTGAAATGCGTGGTGAAGCTTTGTAGCTTTGAAACAAACTACAGCCTCAAGTATTTCTTCAGGAATTAGAACTGAGACCCTCTTTCTATCTCCCTGATTCGGAGCTGCTCTCAGAAGCAAAGCAATCGAATCCAAGGAATTCAGAAATGACAGTAGCACCTTCGCTTTCTCGCCTCCACTCCCCATTTCTGTATTGTCCTCTCAAGCCGACTTCTTCTGCCTCTCTATCCCTTACCTTCTCCAGAAATCAACGATCGCCAGCATCATATCCACGCATCAGAGCTATAGATCTTGACCAAAATACGGTTCCTTCTTCGTCTACTCTAATGATTTTCCATTCAAATAGGATTCCATGCTTTCTACTTGGTTGAAAAGGAAGTAAAGATGAAGATAGAAGTACCTTTTTGTCTCAGGTGGTGGCACTTTCAGTGGGGCTAGCGAGTTTGGCAGTTGGAATAGGCATTCCGGTCTTCTATGAAACCCAAATTGATAATGCTGTAAGCGTTATTCTCCTGTTCTTTAAATCCATGCCTAATAAACTGGGTTTTCTTTCATTTTCACTCATAATCCGTGTGTTTATGTTGTAGGCAAAGCGTGAAAATACTCAGCCCTGCTTTCCCTGCACTGGTTCGGGGGCACGTAAGTTAATTCACTGCTTCAAGAGTCCATCTTTTCATGAAATGATTTTAGGAAGTAGGTTTCCATCGTTCTAAATTGTATCCCCGGGAACTCTCCTGTGTGCCTCCTCCCTGTTCTTGTCCTTCTCCAATAGTATGTCCTTTGGTCCTGCAATCAGAGTTACTTTTCATACAACTTAAACGCTACCAACAGCATAAGATTGTATAACTTAAAATTGTGAAGTAGTCGCATTTGATATAAAATTTATTCATATCAAATTGAGTTGACTAGCCTCCCCTATCCTCAATAGGGCATTGTTGAGAGGGAGTCCTACATTGGTTAATTTAGGGGACGATCATAGATTTATAAATAAGGAATACATCTCCATTGGTATGAGAACTTTTGGAGGACCAAAAGTAAAGCCACGAGAAATTATACTCAAAGTGGACGATATCAAAACATTGTGGAGGATTGTGATTCCTAACATGGTAACAAAACCATGCCCTTAACTTAGCCATGTCAATAGAATCCTCAAATGTCGAACAAAGAAGTTGTGAGCTTCGAAGATGTAGTCAAAAAGCGATTCAAGTGTCGAACAAAGGGTGTATTTTGTTCAAGGGCTCAAGAGATAGAAGTCAAGCCTCAATTAAGAGAAGGTTGTTCAAGGGCTCAGGAGATAGAAGTCGAACCTCAATTAAGGGAAGGTTGTTCAAGGGCTCCATAGGCCTTAAGAGAGGCTCTATGGTGTACTTTGTTCGAGGGGAGGATTGTTGAGAGGGAATCTCACATTGGTTAATTAAAGCGATGATCATGGATTTATAAGTAAAGAATACATCTCCGGGGAGCTTTTCAACTCCAAATTACGTTAACTTTAAACCCTCTAAAATGTAGAAAAGAAAATATGAAATGTGGTTATCAAGCAAGAAAGGAGCTCTTCCTAGGTCGAAATGCATATTCATATTTAGAAACAAGTGGATGGCAAGAGGGTTGTATTATGAACTTACAAAGCCTTGTTTGGAAATGAATAATTCATCGACAGAGAGATGCAGATTTTGCATGGGAACTGGCAATGTGACCGTAGAACTTGGTGGAGATGAAAAGGAAGTCTCCCGATGTATTAATTGTGATGGTGTTGGCACATTGACATGCACTACATGTCAGGGCTCAGGAATTCAACCTCGATACCTAGATCGCAGGTATGTTCTTTTACGCATCTTTTGCTTCATTTTTCTTCCTCTGATGCTCGGAACTCACCTGAAAATCTAGCCGTCCAGACTATCATAGAAGTTGACGAGTGTTTACATTTCCCTTTGAACAGAGAATTTAAAGATGATGATTGAAGCCCAGCAGAACCAAATCCAGCAACATCCGCTGATTTTGCTTTCAGTTTGATGGCTTTAAACTTGTTAGTTCCATTGAATCGTAGAGCTTGGTAACTTCCACCAAGCACTTCTTTTTGGTAACTGTTCGCGTGCATTCTTCTAATGTAGATCTGTGGTTAATAATACAAACAACGTTGTATGAAGAGAGAAGAAATAACTGTACTATCCCGAGTTTATGACTTCATTCCTCTATTGACTGTCAGTAAAATGGGGGATCAAACTCAATCTGATAATCACTAGCTAGTAATGGCAGCAGGTGCAGGTGCAGGTGAATCTGATCAATTCAATTATCAAATCAATCTTGCAATCATATCAGCCGATTGGAACTCAGAGAGTCGCTAATAAAAATCCACATAACTCCGTGGATTCATATCTCAGCCAAACATACAGGGGTAGAAATACTTTTACAAAGAGAGTCAAACATCCCGGTTAACATGAGGTAGTCTTACTTTTACAACACCTTTCTTCTAACCACCTCAAACGTTTCTGGTTCCCTTCAAGTGAAATGAATGTCTCCCTTAAATTTGGTTACTCAAAGAGATCCAAAGCAGCAA

mRNA sequence

ATGGTGCCTCAAGTATTTCTTCAGGAATTAGAACTGAGACCCTCTTTCTATCTCCCTGATTCGGAGCTGCTCTCAGAAGCAAAGCAATCGAATCCAAGGAATTCAGAAATGACAGTAGCACCTTCGCTTTCTCGCCTCCACTCCCCATTTCTGTATTGTCCTCTCAAGCCGACTTCTTCTGCCTCTCTATCCCTTACCTTCTCCAGAAATCAACGATCGCCAGCATCATATCCACGCATCAGAGCTATAGATCTTGACCAAAATACGGTGGTGGCACTTTCAGTGGGGCTAGCGAGTTTGGCAGTTGGAATAGGCATTCCGGTCTTCTATGAAACCCAAATTGATAATGCTGCAAAGCGTGAAAATACTCAGCCCTGCTTTCCCTGCACTGGTTCGGGGGCACAGAGATGCAGATTTTGCATGGGAACTGGCAATGTGACCGTAGAACTTGGTGGAGATGAAAAGGAAGTCTCCCGATGTATTAATTGTGATGGTGTTGGCACATTGACATGCACTACATGTCAGGGCTCAGGAATTCAACCTCGATACCTAGATCGCAGAGAATTTAAAGATGATGATTGAAGCCCAGCAGAACCAAATCCAGCAACATCCGCTGATTTTGCTTTCAGTTTGATGGCTTTAAACTTGTTAGTTCCATTGAATCGTAGAGCTTGGTAACTTCCACCAAGCACTTCTTTTTGGTAACTGTTCGCGTGCATTCTTCTAATGTAGATCTGTGGTTAATAATACAAACAACGTTGTATGAAGAGAGAAGAAATAACTGTACTATCCCGAGTTTATGACTTCATTCCTCTATTGACTGTCAGTAAAATGGGGGATCAAACTCAATCTGATAATCACTAGCTAGTAATGGCAGCAGGTGCAGGTGCAGGTGAATCTGATCAATTCAATTATCAAATCAATCTTGCAATCATATCAGCCGATTGGAACTCAGAGAGTCGCTAATAAAAATCCACATAACTCCGTGGATTCATATCTCAGCCAAACATACAGGGGTAGAAATACTTTTACAAAGAGAGTCAAACATCCCGGTTAACATGAGGTAGTCTTACTTTTACAACACCTTTCTTCTAACCACCTCAAACGTTTCTGGTTCCCTTCAAGTGAAATGAATGTCTCCCTTAAATTTGGTTACTCAAAGAGATCCAAAGCAGCAA

Coding sequence (CDS)

ATGGTGCCTCAAGTATTTCTTCAGGAATTAGAACTGAGACCCTCTTTCTATCTCCCTGATTCGGAGCTGCTCTCAGAAGCAAAGCAATCGAATCCAAGGAATTCAGAAATGACAGTAGCACCTTCGCTTTCTCGCCTCCACTCCCCATTTCTGTATTGTCCTCTCAAGCCGACTTCTTCTGCCTCTCTATCCCTTACCTTCTCCAGAAATCAACGATCGCCAGCATCATATCCACGCATCAGAGCTATAGATCTTGACCAAAATACGGTGGTGGCACTTTCAGTGGGGCTAGCGAGTTTGGCAGTTGGAATAGGCATTCCGGTCTTCTATGAAACCCAAATTGATAATGCTGCAAAGCGTGAAAATACTCAGCCCTGCTTTCCCTGCACTGGTTCGGGGGCACAGAGATGCAGATTTTGCATGGGAACTGGCAATGTGACCGTAGAACTTGGTGGAGATGAAAAGGAAGTCTCCCGATGTATTAATTGTGATGGTGTTGGCACATTGACATGCACTACATGTCAGGGCTCAGGAATTCAACCTCGATACCTAGATCGCAGAGAATTTAAAGATGATGATTGA

Protein sequence

MVPQVFLQELELRPSFYLPDSELLSEAKQSNPRNSEMTVAPSLSRLHSPFLYCPLKPTSSASLSLTFSRNQRSPASYPRIRAIDLDQNTVVALSVGLASLAVGIGIPVFYETQIDNAAKRENTQPCFPCTGSGAQRCRFCMGTGNVTVELGGDEKEVSRCINCDGVGTLTCTTCQGSGIQPRYLDRREFKDDD

Homology

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BLAST of CmoCh09G001080 vs. ExPASy Swiss-Prot
Match: K4BVL1 (Protein SPA, chloroplastic OS=Solanum lycopersicum OX=4081 GN=SPA PE=2 SV=1)

HSP 1 Score: 245.0 bits (624), Expect = 7.1e-64
Identity = 119/159 (74.84%), Postives = 135/159 (84.91%), Query Frame = 0


Query: 37  MTVAPSLSRLHSPFLYCPLK-PT-SSASLSLTFSRNQRSPASYPRIRAIDLDQNTVVALS 96
           M  APSLSR  SPF+  PLK PT SS+  +  F +  R   SYP I+A+DLDQNTV+A++
Sbjct: 1   MLTAPSLSRFKSPFISSPLKLPTLSSSFFTQKFHQTCRRRNSYPCIKAVDLDQNTVIAIT 60

Query: 97  VGLASLAVGIGIPVFYETQIDNAAKRENTQPCFPCTGSGAQRCRFCMGTGNVTVELGGDE 156
           VG+ S+A+G+GIPVFYETQIDNAAKRENTQPCFPCTG+GAQ+CRFCMGTG+VTVELGG E
Sbjct: 61  VGVLSVAIGVGIPVFYETQIDNAAKRENTQPCFPCTGTGAQKCRFCMGTGSVTVELGGGE 120

Query: 157 KEVSRCINCDGVGTLTCTTCQGSGIQPRYLDRREFKDDD 194
            EVSRCINCDG G LTCTTCQGSGIQPRYLDRREFKDDD
Sbjct: 121 TEVSRCINCDGAGGLTCTTCQGSGIQPRYLDRREFKDDD 159

[Close]

BLAST of CmoCh09G001080 vs. ExPASy Swiss-Prot
Match: Q8GSJ6 (Protein disulfide-isomerase LQY1, chloroplastic OS=Arabidopsis thaliana OX=3702 GN=LQY1 PE=1 SV=1)

HSP 1 Score: 241.1 bits (614), Expect = 1.0e-62
Identity = 117/155 (75.48%), Postives = 135/155 (87.10%), Query Frame = 0


Query: 40  APSLSRLHSPFLYCPLKPTSSASLSLTFSRNQRSPA-SYPRIRAIDLDQNTVVALSVGLA 99
           APS  RLHSPF++CP+  T S+      +RN RSP+ SYPRI+A +LD NTVVA+SVG+A
Sbjct: 5   APSPPRLHSPFIHCPINFTPSS----FSARNLRSPSTSYPRIKA-ELDPNTVVAISVGVA 64

Query: 100 SLAVGIGIPVFYETQIDNAAKRENTQPCFPCTGSGAQRCRFCMGTGNVTVELGGDEKEVS 159
           S+A+GIGIPVFYETQIDNAAKRENTQPCFPC G+GAQ+CR C+G+GNVTVELGG EKEVS
Sbjct: 65  SVALGIGIPVFYETQIDNAAKRENTQPCFPCNGTGAQKCRLCVGSGNVTVELGGGEKEVS 124

Query: 160 RCINCDGVGTLTCTTCQGSGIQPRYLDRREFKDDD 194
            CINCDG G+LTCTTCQGSG+QPRYLDRREFKDDD
Sbjct: 125 NCINCDGAGSLTCTTCQGSGVQPRYLDRREFKDDD 154

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BLAST of CmoCh09G001080 vs. ExPASy TrEMBL
Match: A0A6J1IFD3 (protein SPA, chloroplastic OS=Cucurbita maxima OX=3661 GN=LOC111476444 PE=4 SV=1)

HSP 1 Score: 323.9 bits (829), Expect = 4.4e-85
Identity = 157/157 (100.00%), Postives = 157/157 (100.00%), Query Frame = 0


Query: 37  MTVAPSLSRLHSPFLYCPLKPTSSASLSLTFSRNQRSPASYPRIRAIDLDQNTVVALSVG 96
           MTVAPSLSRLHSPFLYCPLKPTSSASLSLTFSRNQRSPASYPRIRAIDLDQNTVVALSVG
Sbjct: 1   MTVAPSLSRLHSPFLYCPLKPTSSASLSLTFSRNQRSPASYPRIRAIDLDQNTVVALSVG 60

Query: 97  LASLAVGIGIPVFYETQIDNAAKRENTQPCFPCTGSGAQRCRFCMGTGNVTVELGGDEKE 156
           LASLAVGIGIPVFYETQIDNAAKRENTQPCFPCTGSGAQRCRFCMGTGNVTVELGGDEKE
Sbjct: 61  LASLAVGIGIPVFYETQIDNAAKRENTQPCFPCTGSGAQRCRFCMGTGNVTVELGGDEKE 120

Query: 157 VSRCINCDGVGTLTCTTCQGSGIQPRYLDRREFKDDD 194
           VSRCINCDGVGTLTCTTCQGSGIQPRYLDRREFKDDD
Sbjct: 121 VSRCINCDGVGTLTCTTCQGSGIQPRYLDRREFKDDD 157

[Close]

BLAST of CmoCh09G001080 vs. ExPASy TrEMBL
Match: A0A6J1F877 (protein SPA, chloroplastic OS=Cucurbita moschata OX=3662 GN=LOC111443033 PE=4 SV=1)

HSP 1 Score: 323.9 bits (829), Expect = 4.4e-85
Identity = 157/157 (100.00%), Postives = 157/157 (100.00%), Query Frame = 0


Query: 37  MTVAPSLSRLHSPFLYCPLKPTSSASLSLTFSRNQRSPASYPRIRAIDLDQNTVVALSVG 96
           MTVAPSLSRLHSPFLYCPLKPTSSASLSLTFSRNQRSPASYPRIRAIDLDQNTVVALSVG
Sbjct: 1   MTVAPSLSRLHSPFLYCPLKPTSSASLSLTFSRNQRSPASYPRIRAIDLDQNTVVALSVG 60

Query: 97  LASLAVGIGIPVFYETQIDNAAKRENTQPCFPCTGSGAQRCRFCMGTGNVTVELGGDEKE 156
           LASLAVGIGIPVFYETQIDNAAKRENTQPCFPCTGSGAQRCRFCMGTGNVTVELGGDEKE
Sbjct: 61  LASLAVGIGIPVFYETQIDNAAKRENTQPCFPCTGSGAQRCRFCMGTGNVTVELGGDEKE 120

Query: 157 VSRCINCDGVGTLTCTTCQGSGIQPRYLDRREFKDDD 194
           VSRCINCDGVGTLTCTTCQGSGIQPRYLDRREFKDDD
Sbjct: 121 VSRCINCDGVGTLTCTTCQGSGIQPRYLDRREFKDDD 157

[Close]

BLAST of CmoCh09G001080 vs. ExPASy TrEMBL
Match: A0A1S3CRE4 (protein SPA, chloroplastic OS=Cucumis melo OX=3656 GN=LOC103503884 PE=4 SV=1)

HSP 1 Score: 312.4 bits (799), Expect = 1.3e-81
Identity = 150/157 (95.54%), Postives = 153/157 (97.45%), Query Frame = 0


Query: 37  MTVAPSLSRLHSPFLYCPLKPTSSASLSLTFSRNQRSPASYPRIRAIDLDQNTVVALSVG 96
           MTVAPSLSRLHSPFLYCPLKPTSS SLS+TFS NQRSP SYPRIRAIDLDQNTVVALSVG
Sbjct: 1   MTVAPSLSRLHSPFLYCPLKPTSSTSLSVTFSGNQRSPPSYPRIRAIDLDQNTVVALSVG 60

Query: 97  LASLAVGIGIPVFYETQIDNAAKRENTQPCFPCTGSGAQRCRFCMGTGNVTVELGGDEKE 156
           L S+AVGIGIPVFYETQIDNAAKRENTQPCFPC+GSGAQRCRFCMGTGNVTVELGGDEKE
Sbjct: 61  LVSVAVGIGIPVFYETQIDNAAKRENTQPCFPCSGSGAQRCRFCMGTGNVTVELGGDEKE 120

Query: 157 VSRCINCDGVGTLTCTTCQGSGIQPRYLDRREFKDDD 194
           VSRCINCDGVGTLTCTTCQGSGIQPRYLDRREFKDDD
Sbjct: 121 VSRCINCDGVGTLTCTTCQGSGIQPRYLDRREFKDDD 157

[Close]

BLAST of CmoCh09G001080 vs. ExPASy TrEMBL
Match: A0A6J1CMU6 (protein SPA, chloroplastic OS=Momordica charantia OX=3673 GN=LOC111012411 PE=4 SV=1)

HSP 1 Score: 310.5 bits (794), Expect = 5.1e-81
Identity = 149/157 (94.90%), Postives = 154/157 (98.09%), Query Frame = 0


Query: 37  MTVAPSLSRLHSPFLYCPLKPTSSASLSLTFSRNQRSPASYPRIRAIDLDQNTVVALSVG 96
           MT APSLSRLHSPFLY PLKPTS+ASLSLTFSRNQRSPASYPRIRAIDLDQNTVVALSVG
Sbjct: 1   MTTAPSLSRLHSPFLYSPLKPTSAASLSLTFSRNQRSPASYPRIRAIDLDQNTVVALSVG 60

Query: 97  LASLAVGIGIPVFYETQIDNAAKRENTQPCFPCTGSGAQRCRFCMGTGNVTVELGGDEKE 156
           L S+AVGIGIPVFYETQIDNAAKRENTQPCFPC+GSGAQ+CRFCMGTGNVTVELGGDEKE
Sbjct: 61  LVSVAVGIGIPVFYETQIDNAAKRENTQPCFPCSGSGAQKCRFCMGTGNVTVELGGDEKE 120

Query: 157 VSRCINCDGVGTLTCTTCQGSGIQPRYLDRREFKDDD 194
           VSRCINC+GVGTLTCTTCQGSGIQPRYLDRREFKDDD
Sbjct: 121 VSRCINCEGVGTLTCTTCQGSGIQPRYLDRREFKDDD 157

[Close]

BLAST of CmoCh09G001080 vs. ExPASy TrEMBL
Match: A0A0A0LJ55 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_3G872080 PE=4 SV=1)

HSP 1 Score: 308.9 bits (790), Expect = 1.5e-80
Identity = 147/157 (93.63%), Postives = 152/157 (96.82%), Query Frame = 0


Query: 37  MTVAPSLSRLHSPFLYCPLKPTSSASLSLTFSRNQRSPASYPRIRAIDLDQNTVVALSVG 96
           MTVAPSLSRLHSPFLYCPLKPT S SLS+TFS NQRSP SYPRIRAIDLDQNTVVALSVG
Sbjct: 1   MTVAPSLSRLHSPFLYCPLKPTPSTSLSVTFSGNQRSPPSYPRIRAIDLDQNTVVALSVG 60

Query: 97  LASLAVGIGIPVFYETQIDNAAKRENTQPCFPCTGSGAQRCRFCMGTGNVTVELGGDEKE 156
           L S+A+GIGIPVFYETQIDNAAKRENTQPCFPC+GSGAQRCRFCMGTGNVTVELGGD+KE
Sbjct: 61  LVSVAIGIGIPVFYETQIDNAAKRENTQPCFPCSGSGAQRCRFCMGTGNVTVELGGDDKE 120

Query: 157 VSRCINCDGVGTLTCTTCQGSGIQPRYLDRREFKDDD 194
           VSRCINCDGVGTLTCTTCQGSGIQPRYLDRREFKDDD
Sbjct: 121 VSRCINCDGVGTLTCTTCQGSGIQPRYLDRREFKDDD 157

[Close]

BLAST of CmoCh09G001080 vs. NCBI nr
Match: XP_022936404.1 (protein SPA, chloroplastic [Cucurbita moschata] >XP_022975871.1 protein SPA, chloroplastic [Cucurbita maxima] >XP_023535894.1 protein SPA, chloroplastic [Cucurbita pepo subsp. pepo] >KAG6591276.1 Protein SPA, chloroplastic, partial [Cucurbita argyrosperma subsp. sororia])

HSP 1 Score: 323.9 bits (829), Expect = 9.2e-85
Identity = 157/157 (100.00%), Postives = 157/157 (100.00%), Query Frame = 0


Query: 37  MTVAPSLSRLHSPFLYCPLKPTSSASLSLTFSRNQRSPASYPRIRAIDLDQNTVVALSVG 96
           MTVAPSLSRLHSPFLYCPLKPTSSASLSLTFSRNQRSPASYPRIRAIDLDQNTVVALSVG
Sbjct: 1   MTVAPSLSRLHSPFLYCPLKPTSSASLSLTFSRNQRSPASYPRIRAIDLDQNTVVALSVG 60

Query: 97  LASLAVGIGIPVFYETQIDNAAKRENTQPCFPCTGSGAQRCRFCMGTGNVTVELGGDEKE 156
           LASLAVGIGIPVFYETQIDNAAKRENTQPCFPCTGSGAQRCRFCMGTGNVTVELGGDEKE
Sbjct: 61  LASLAVGIGIPVFYETQIDNAAKRENTQPCFPCTGSGAQRCRFCMGTGNVTVELGGDEKE 120

Query: 157 VSRCINCDGVGTLTCTTCQGSGIQPRYLDRREFKDDD 194
           VSRCINCDGVGTLTCTTCQGSGIQPRYLDRREFKDDD
Sbjct: 121 VSRCINCDGVGTLTCTTCQGSGIQPRYLDRREFKDDD 157

[Close]

BLAST of CmoCh09G001080 vs. NCBI nr
Match: XP_038899789.1 (protein SPA, chloroplastic [Benincasa hispida])

HSP 1 Score: 313.2 bits (801), Expect = 1.6e-81
Identity = 149/157 (94.90%), Postives = 154/157 (98.09%), Query Frame = 0


Query: 37  MTVAPSLSRLHSPFLYCPLKPTSSASLSLTFSRNQRSPASYPRIRAIDLDQNTVVALSVG 96
           MTVAPS+SRLHSPFLYCPLKPTSS SLS+TFSRNQRSPA+YPRIRAIDLDQNTVVALSVG
Sbjct: 1   MTVAPSVSRLHSPFLYCPLKPTSSTSLSVTFSRNQRSPATYPRIRAIDLDQNTVVALSVG 60

Query: 97  LASLAVGIGIPVFYETQIDNAAKRENTQPCFPCTGSGAQRCRFCMGTGNVTVELGGDEKE 156
           L S+AVGIGIPVFYETQIDNAAKRENTQPCFPC+GSGAQRCRFCMGTGNVTVELGGDEKE
Sbjct: 61  LVSVAVGIGIPVFYETQIDNAAKRENTQPCFPCSGSGAQRCRFCMGTGNVTVELGGDEKE 120

Query: 157 VSRCINCDGVGTLTCTTCQGSGIQPRYLDRREFKDDD 194
           VSRCINCDG GTLTCTTCQGSGIQPRYLDRREFKDDD
Sbjct: 121 VSRCINCDGAGTLTCTTCQGSGIQPRYLDRREFKDDD 157

[Close]

BLAST of CmoCh09G001080 vs. NCBI nr
Match: XP_008466492.1 (PREDICTED: protein SPA, chloroplastic [Cucumis melo])

HSP 1 Score: 312.4 bits (799), Expect = 2.8e-81
Identity = 150/157 (95.54%), Postives = 153/157 (97.45%), Query Frame = 0


Query: 37  MTVAPSLSRLHSPFLYCPLKPTSSASLSLTFSRNQRSPASYPRIRAIDLDQNTVVALSVG 96
           MTVAPSLSRLHSPFLYCPLKPTSS SLS+TFS NQRSP SYPRIRAIDLDQNTVVALSVG
Sbjct: 1   MTVAPSLSRLHSPFLYCPLKPTSSTSLSVTFSGNQRSPPSYPRIRAIDLDQNTVVALSVG 60

Query: 97  LASLAVGIGIPVFYETQIDNAAKRENTQPCFPCTGSGAQRCRFCMGTGNVTVELGGDEKE 156
           L S+AVGIGIPVFYETQIDNAAKRENTQPCFPC+GSGAQRCRFCMGTGNVTVELGGDEKE
Sbjct: 61  LVSVAVGIGIPVFYETQIDNAAKRENTQPCFPCSGSGAQRCRFCMGTGNVTVELGGDEKE 120

Query: 157 VSRCINCDGVGTLTCTTCQGSGIQPRYLDRREFKDDD 194
           VSRCINCDGVGTLTCTTCQGSGIQPRYLDRREFKDDD
Sbjct: 121 VSRCINCDGVGTLTCTTCQGSGIQPRYLDRREFKDDD 157

[Close]

BLAST of CmoCh09G001080 vs. NCBI nr
Match: KAG7024161.1 (Protein SPA, chloroplastic [Cucurbita argyrosperma subsp. argyrosperma])

HSP 1 Score: 311.2 bits (796), Expect = 6.1e-81
Identity = 156/175 (89.14%), Postives = 157/175 (89.71%), Query Frame = 0


Query: 37  MTVAPSLSRLHSPFLYCPLKPTSSASLSLTFSRNQRSPASYPRIRAIDLDQNTVVALSVG 96
           MTVAPSLSRLHSPFLYCPLKPTSSASLSLTFSRNQRSPASYPRIRAIDLDQNTVVALSVG
Sbjct: 1   MTVAPSLSRLHSPFLYCPLKPTSSASLSLTFSRNQRSPASYPRIRAIDLDQNTVVALSVG 60

Query: 97  LASLAVGIGIPVFYETQIDNAAKRENTQPCFPCTGSGA------------------QRCR 156
           LASLAVGIGIPVFYETQIDNAAKRENTQPCFPCTGSGA                  +RCR
Sbjct: 61  LASLAVGIGIPVFYETQIDNAAKRENTQPCFPCTGSGARKLIHCFKSPSFHEMILGKRCR 120

Query: 157 FCMGTGNVTVELGGDEKEVSRCINCDGVGTLTCTTCQGSGIQPRYLDRREFKDDD 194
           FCMGTGNVTVELGGDEKEVSRCINCDGVGTLTCTTCQGSGIQPRYLDRREFKDDD
Sbjct: 121 FCMGTGNVTVELGGDEKEVSRCINCDGVGTLTCTTCQGSGIQPRYLDRREFKDDD 175

[Close]

BLAST of CmoCh09G001080 vs. NCBI nr
Match: XP_022142253.1 (protein SPA, chloroplastic [Momordica charantia])

HSP 1 Score: 310.5 bits (794), Expect = 1.0e-80
Identity = 149/157 (94.90%), Postives = 154/157 (98.09%), Query Frame = 0


Query: 37  MTVAPSLSRLHSPFLYCPLKPTSSASLSLTFSRNQRSPASYPRIRAIDLDQNTVVALSVG 96
           MT APSLSRLHSPFLY PLKPTS+ASLSLTFSRNQRSPASYPRIRAIDLDQNTVVALSVG
Sbjct: 1   MTTAPSLSRLHSPFLYSPLKPTSAASLSLTFSRNQRSPASYPRIRAIDLDQNTVVALSVG 60

Query: 97  LASLAVGIGIPVFYETQIDNAAKRENTQPCFPCTGSGAQRCRFCMGTGNVTVELGGDEKE 156
           L S+AVGIGIPVFYETQIDNAAKRENTQPCFPC+GSGAQ+CRFCMGTGNVTVELGGDEKE
Sbjct: 61  LVSVAVGIGIPVFYETQIDNAAKRENTQPCFPCSGSGAQKCRFCMGTGNVTVELGGDEKE 120

Query: 157 VSRCINCDGVGTLTCTTCQGSGIQPRYLDRREFKDDD 194
           VSRCINC+GVGTLTCTTCQGSGIQPRYLDRREFKDDD
Sbjct: 121 VSRCINCEGVGTLTCTTCQGSGIQPRYLDRREFKDDD 157

[Close]

BLAST of CmoCh09G001080 vs. TAIR 10
Match: AT1G75690.1 (DnaJ/Hsp40 cysteine-rich domain superfamily protein )

HSP 1 Score: 241.1 bits (614), Expect = 7.3e-64
Identity = 117/155 (75.48%), Postives = 135/155 (87.10%), Query Frame = 0


Query: 40  APSLSRLHSPFLYCPLKPTSSASLSLTFSRNQRSPA-SYPRIRAIDLDQNTVVALSVGLA 99
           APS  RLHSPF++CP+  T S+      +RN RSP+ SYPRI+A +LD NTVVA+SVG+A
Sbjct: 5   APSPPRLHSPFIHCPINFTPSS----FSARNLRSPSTSYPRIKA-ELDPNTVVAISVGVA 64

Query: 100 SLAVGIGIPVFYETQIDNAAKRENTQPCFPCTGSGAQRCRFCMGTGNVTVELGGDEKEVS 159
           S+A+GIGIPVFYETQIDNAAKRENTQPCFPC G+GAQ+CR C+G+GNVTVELGG EKEVS
Sbjct: 65  SVALGIGIPVFYETQIDNAAKRENTQPCFPCNGTGAQKCRLCVGSGNVTVELGGGEKEVS 124

Query: 160 RCINCDGVGTLTCTTCQGSGIQPRYLDRREFKDDD 194
            CINCDG G+LTCTTCQGSG+QPRYLDRREFKDDD
Sbjct: 125 NCINCDGAGSLTCTTCQGSGVQPRYLDRREFKDDD 154

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BLAST of CmoCh09G001080 vs. TAIR 10
Match: AT4G13670.1 (plastid transcriptionally active 5 )

HSP 1 Score: 42.4 bits (98), Expect = 5.0e-04
Identity = 30/101 (29.70%), Postives = 39/101 (38.61%), Query Frame = 0


Query: 81  RAIDLDQNTVVALSVGL---ASLAVGIGIPVFYETQIDNAAKRENTQPCFPCTGSGAQRC 140
           R +D+ QN V  L        S  +G   PV      D +        C  C G G   C
Sbjct: 289 REVDVTQNRVFLLGENRWEDPSRLIGRNKPV------DRSESTNTKTRCITCRGEGRLMC 348

Query: 141 RFCMGTGNVTVELGGDE--KEVSRCINCDGVGTLTCTTCQG 177
             C GTG   +E    E   E ++C  C+G+G   C  C G
Sbjct: 349 LECDGTGEPNIEPQFMEWVGEDTKCPYCEGLGYTVCDVCDG 383

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BLAST of CmoCh09G001080 vs. TAIR 10
Match: AT2G38000.1 (chaperone protein dnaJ-related )

HSP 1 Score: 41.6 bits (96), Expect = 8.5e-04
Identity = 27/91 (29.67%), Postives = 35/91 (38.46%), Query Frame = 0


Query: 109 FYETQIDNAAKRENTQPCFPCTGSG--------------------AQRCRFCMGTGNVTV 168
           + ETQ+      E  + C  CTG G                      +C  C G G V  
Sbjct: 185 YKETQV-LVPNSETVEKCTGCTGRGDVVCPTCNADGEPGFYKENQMMKCSTCYGRGLVAH 244

Query: 169 ELGGDEKEVSRCINCDGVGTLTCTTCQGSGI 180
           + G D    + C NC+G G L C TCQ  G+
Sbjct: 245 KDGSD----TICTNCNGKGKLPCPTCQSRGL 270

The following BLAST results are available for this feature:

BLAST of CmoCh09G001080 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
K4BVL1	7.1e-64	74.84	Protein SPA, chloroplastic OS=Solanum lycopersicum OX=4081 GN=SPA PE=2 SV=1	[more]
Q8GSJ6	1.0e-62	75.48	Protein disulfide-isomerase LQY1, chloroplastic OS=Arabidopsis thaliana OX=3702 ...	[more]

BLAST of CmoCh09G001080 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A6J1IFD3	4.4e-85	100.00	protein SPA, chloroplastic OS=Cucurbita maxima OX=3661 GN=LOC111476444 PE=4 SV=1	[more]
A0A6J1F877	4.4e-85	100.00	protein SPA, chloroplastic OS=Cucurbita moschata OX=3662 GN=LOC111443033 PE=4 SV...	[more]
A0A1S3CRE4	1.3e-81	95.54	protein SPA, chloroplastic OS=Cucumis melo OX=3656 GN=LOC103503884 PE=4 SV=1	[more]
A0A6J1CMU6	5.1e-81	94.90	protein SPA, chloroplastic OS=Momordica charantia OX=3673 GN=LOC111012411 PE=4 S...	[more]
A0A0A0LJ55	1.5e-80	93.63	Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_3G872080 PE=4 SV=1	[more]

BLAST of CmoCh09G001080 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_022936404.1	9.2e-85	100.00	protein SPA, chloroplastic [Cucurbita moschata] >XP_022975871.1 protein SPA, chl...	[more]
XP_038899789.1	1.6e-81	94.90	protein SPA, chloroplastic [Benincasa hispida]	[more]
XP_008466492.1	2.8e-81	95.54	PREDICTED: protein SPA, chloroplastic [Cucumis melo]	[more]
KAG7024161.1	6.1e-81	89.14	Protein SPA, chloroplastic [Cucurbita argyrosperma subsp. argyrosperma]	[more]
XP_022142253.1	1.0e-80	94.90	protein SPA, chloroplastic [Momordica charantia]	[more]

BLAST of CmoCh09G001080 vs. TAIR 10


Match Name	E-value	Identity	Description
AT1G75690.1	7.3e-64	75.48	DnaJ/Hsp40 cysteine-rich domain superfamily protein	[more]
AT4G13670.1	5.0e-04	29.70	plastid transcriptionally active 5	[more]
AT2G38000.1	8.5e-04	29.67	chaperone protein dnaJ-related	[more]

InterPro

Analysis Name: InterPro Annotations of Cucurbita moschata (Rifu) v1
Date Performed: 2021-10-25


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR035272	Protein of unknown function DUF5351	PFAM	PF17302	DUF5351	coord: 137..168 e-value: 1.3E-9 score: 38.1
None	No IPR available	PANTHER	PTHR15852:SF27	PROTEIN DISULFIDE-ISOMERASE LQY1, CHLOROPLASTIC	coord: 40..192
None	No IPR available	PANTHER	PTHR15852	PLASTID TRANSCRIPTIONALLY ACTIVE PROTEIN	coord: 40..192
IPR036410	Heat shock protein DnaJ, cysteine-rich domain superfamily	SUPERFAMILY	57938	DnaJ/Hsp40 cysteine-rich domain	coord: 121..180

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
CmoCh09G001080.1	CmoCh09G001080.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0010206	photosystem II repair
cellular_component	GO:0009507	chloroplast
cellular_component	GO:0016021	integral component of membrane
molecular_function	GO:0003756	protein disulfide isomerase activity