CmoCh08G012510 (gene) Cucurbita moschata (Rifu) v1

Overview


Name	CmoCh08G012510
Type	gene
Organism	Cucurbita moschata (Cucurbita moschata (Rifu) v1)
Description	transcription factor bHLH147-like
Location	Cmo_Chr08: 7898614 .. 7899219 (+)
RNA-Seq Expression	CmoCh08G012510
Synteny	CmoCh08G012510

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDSpolypeptide

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGGCGTCATCTGTTCTTTCCAACTCCGATCGCATGCGGGAGTCTTCAAGGAAGCAAAAGAAGAAGAAAAACCACGGCAACAGAGACCGTCATCAAAACCAGAACCATATTAACTGGAAATCTCAAGCTCAGAAAGAAATTTACTCGTCTAAGCTGGTACGAGCGTTGAATCAAGTGAGGCTCAGTCCTTCGAATGAGGCGCCCCGCCGTGGTAGAGCCGTACGCGAGGCCGCCGACAGAATCCTTGCCGTCGCCGCCAAGGGGAGAACCAGGTGGAGCCGAGCCATTCTAACGAACAGGTTGAAGCTCAAGTTCAGGAAGCCGAAGAAACAGAGAGCATCCACCGCTGGAATCAACCGCCCAAAGAAACCTAGAGTCAGCGTATTGCGGTTGAAAGGAAAAACGTTGCCGGCGGTGCAAAGGAAAGTTAGGGTTCTTGGACGGCTAGTTCCCGGTTGCCGGAAAGAACCTTTGCCGGTTATCCTAGAAGAGGCCACCGATTACATAGCTGCACTTGAAATGCAAGTTCGAGCTATGACTGCCCTCGCCGAGTTGCTCTCGGCCTCAACTTCTGTTGCAGGCTCTAGCTCCGCTCCTCCAAGCTGA

mRNA sequence

ATGGCGTCATCTGTTCTTTCCAACTCCGATCGCATGCGGGAGTCTTCAAGGAAGCAAAAGAAGAAGAAAAACCACGGCAACAGAGACCGTCATCAAAACCAGAACCATATTAACTGGAAATCTCAAGCTCAGAAAGAAATTTACTCGTCTAAGCTGGTACGAGCGTTGAATCAAGTGAGGCTCAGTCCTTCGAATGAGGCGCCCCGCCGTGGTAGAGCCGTACGCGAGGCCGCCGACAGAATCCTTGCCGTCGCCGCCAAGGGGAGAACCAGGTGGAGCCGAGCCATTCTAACGAACAGGTTGAAGCTCAAGTTCAGGAAGCCGAAGAAACAGAGAGCATCCACCGCTGGAATCAACCGCCCAAAGAAACCTAGAGTCAGCGTATTGCGGTTGAAAGGAAAAACGTTGCCGGCGGTGCAAAGGAAAGTTAGGGTTCTTGGACGGCTAGTTCCCGGTTGCCGGAAAGAACCTTTGCCGGTTATCCTAGAAGAGGCCACCGATTACATAGCTGCACTTGAAATGCAAGTTCGAGCTATGACTGCCCTCGCCGAGTTGCTCTCGGCCTCAACTTCTGTTGCAGGCTCTAGCTCCGCTCCTCCAAGCTGA

Coding sequence (CDS)

ATGGCGTCATCTGTTCTTTCCAACTCCGATCGCATGCGGGAGTCTTCAAGGAAGCAAAAGAAGAAGAAAAACCACGGCAACAGAGACCGTCATCAAAACCAGAACCATATTAACTGGAAATCTCAAGCTCAGAAAGAAATTTACTCGTCTAAGCTGGTACGAGCGTTGAATCAAGTGAGGCTCAGTCCTTCGAATGAGGCGCCCCGCCGTGGTAGAGCCGTACGCGAGGCCGCCGACAGAATCCTTGCCGTCGCCGCCAAGGGGAGAACCAGGTGGAGCCGAGCCATTCTAACGAACAGGTTGAAGCTCAAGTTCAGGAAGCCGAAGAAACAGAGAGCATCCACCGCTGGAATCAACCGCCCAAAGAAACCTAGAGTCAGCGTATTGCGGTTGAAAGGAAAAACGTTGCCGGCGGTGCAAAGGAAAGTTAGGGTTCTTGGACGGCTAGTTCCCGGTTGCCGGAAAGAACCTTTGCCGGTTATCCTAGAAGAGGCCACCGATTACATAGCTGCACTTGAAATGCAAGTTCGAGCTATGACTGCCCTCGCCGAGTTGCTCTCGGCCTCAACTTCTGTTGCAGGCTCTAGCTCCGCTCCTCCAAGCTGA

Protein sequence

MASSVLSNSDRMRESSRKQKKKKNHGNRDRHQNQNHINWKSQAQKEIYSSKLVRALNQVRLSPSNEAPRRGRAVREAADRILAVAAKGRTRWSRAILTNRLKLKFRKPKKQRASTAGINRPKKPRVSVLRLKGKTLPAVQRKVRVLGRLVPGCRKEPLPVILEEATDYIAALEMQVRAMTALAELLSASTSVAGSSSAPPS

Homology

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BLAST of CmoCh08G012510 vs. ExPASy Swiss-Prot
Match: Q9LSN7 (Transcription factor bHLH147 OS=Arabidopsis thaliana OX=3702 GN=BHLH147 PE=1 SV=1)

HSP 1 Score: 169.9 bits (429), Expect = 3.0e-41
Identity = 110/198 (55.56%), Postives = 140/198 (70.71%), Query Frame = 0


Query: 7   SNSDRMRESSRKQKKKKNHGNRDRHQNQNHI--NWKSQAQKEIYSSKLVRALNQVRL--- 66
           SNSDR R   RK+KKK +  + ++  + +     W+S+ Q++IYS+KLV AL ++R+   
Sbjct: 19  SNSDRSR---RKRKKKSSPSSVEKSPSPSISLEKWRSEKQQQIYSTKLVHALRELRISQQ 78

Query: 67  ---SPSNEAPRRGRAVREAADRILAVAAKGRTRWSRAILTNRLKLKFRKPKKQRAS---- 126
              S S+  PR GRAVRE ADR LAVAA+G+T WSRAIL+  +KLKFRK K+QR S    
Sbjct: 79  PSSSSSSSIPRGGRAVREVADRALAVAARGKTLWSRAILSKAVKLKFRKHKRQRISNPTT 138

Query: 127 ---TAGINRPKKPRVSVLRLKGKTLPAVQRKVRVLGRLVPGCRKEPLPVILEEATDYIAA 186
              T G  R KK R +VLRLK K LPAVQRKV+VL RLVPGCRK+ LPV+LEE TDYIAA
Sbjct: 139 TTLTTGSIRSKKQRATVLRLKAKGLPAVQRKVKVLSRLVPGCRKQSLPVVLEETTDYIAA 198

Query: 187 LEMQVRAMTALAELLSAS 190
           +EMQ+R MTA+   +S+S
Sbjct: 199 MEMQIRTMTAILSAVSSS 213

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BLAST of CmoCh08G012510 vs. ExPASy Swiss-Prot
Match: Q9C8Z9 (Transcription factor bHLH148 OS=Arabidopsis thaliana OX=3702 GN=BHLH148 PE=1 SV=1)

HSP 1 Score: 163.7 bits (413), Expect = 2.2e-39
Identity = 111/214 (51.87%), Postives = 139/214 (64.95%), Query Frame = 0


Query: 3   SSVLSNSDRMRESSRKQKKKKNHGNRDRHQNQNHINWKSQAQKEIYSSKLVRALNQVRL- 62
           +S  S+  R ++ S       +  +      + H  W+S+ Q+ IYS+KL +AL QVRL 
Sbjct: 12  TSTTSDLVRRKKRSSASSAASSRSSASSVSGEIHARWRSEKQQRIYSAKLFQALQQVRLN 71

Query: 63  -----SPSNEAPRRGRAVREAADRILAVAAKGRTRWSRAILTNRLKLKFRKPKKQRASTA 122
                S S  A +RG+AVREAADR LAV+A+GRT WSRAIL NR+KLKFRK ++ RA+ A
Sbjct: 72  SSASTSSSPTAQKRGKAVREAADRALAVSARGRTLWSRAILANRIKLKFRKQRRPRATMA 131

Query: 123 ----------GINRPKKPRVSVLRLKGKTLPAVQRKVRVLGRLVPGCRKEPLPVILEEAT 182
                       NR +K RVSVLRL  K++P V RKVRVLGRLVPGC K+ +PVILEEAT
Sbjct: 132 IPAMTTVVSSSSNRSRKRRVSVLRLNKKSIPDVNRKVRVLGRLVPGCGKQSVPVILEEAT 191

Query: 183 DYIAALEMQVRAMTALAELLSASTSVAGSSSAPP 201
           DYI ALEMQVRAM +L +LLS+        SAPP
Sbjct: 192 DYIQALEMQVRAMNSLVQLLSS------YGSAPP 219

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BLAST of CmoCh08G012510 vs. ExPASy Swiss-Prot
Match: O80482 (Transcription factor bHLH149 OS=Arabidopsis thaliana OX=3702 GN=BHLH149 PE=1 SV=1)

HSP 1 Score: 124.4 bits (311), Expect = 1.5e-27
Identity = 90/202 (44.55%), Postives = 130/202 (64.36%), Query Frame = 0


Query: 1   MASSVLSNSDRMRESSRKQKKKKNHGN----RDRHQNQNHI-NWKSQAQKEIYSSKLVRA 60
           M  S+  + +   ESSR++K + +         R  N+  +  WK+   ++IY+ KLV A
Sbjct: 1   MVESLFPSIENTGESSRRKKPRISETAEAEIEARRVNEESLKRWKTNRVQQIYACKLVEA 60

Query: 61  LNQVR----LSPSNEAPR----RGRAVREAADRILAVAAKGRTRWSRAILTNRLKLKFRK 120
           L +VR     + +NE  +      R +R+ ADR+LA +A+G TRWSRAIL +R++ K +K
Sbjct: 61  LRRVRQRSSTTSNNETDKLVSGAAREIRDTADRVLAASARGTTRWSRAILASRVRAKLKK 120

Query: 121 PKKQRASTAGINRPKKPRVSVLRLKGKTLPAVQRKVRVLGRLVPGCRKEPLPVILEEATD 180
            +K + ST G  + +K      R+K   LPAV+RK+++LGRLVPGCRK  +P +L+EATD
Sbjct: 121 HRKAKKST-GNCKSRKGLTETNRIK---LPAVERKLKILGRLVPGCRKVSVPNLLDEATD 180

Query: 181 YIAALEMQVRAMTALAELLSAS 190
           YIAALEMQVRAM ALAELL+A+
Sbjct: 181 YIAALEMQVRAMEALAELLTAA 198

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BLAST of CmoCh08G012510 vs. ExPASy Swiss-Prot
Match: Q9M9L6 (Transcription factor bHLH150 OS=Arabidopsis thaliana OX=3702 GN=BHLH150 PE=1 SV=1)

HSP 1 Score: 102.1 bits (253), Expect = 7.7e-21
Identity = 67/149 (44.97%), Postives = 91/149 (61.07%), Query Frame = 0


Query: 39  WKSQAQKEIYSSKLVRALNQVRLSPSNEAPRRGRAVREAADRILAVAAKGRTRWSRAILT 98
           W++   +++YS KL  AL         +  RR   VR+ AD++LA  A+G TRWSRAIL 
Sbjct: 63  WRATTAQKVYSLKLYDAL---------QRSRRSATVRDTADKVLATTARGATRWSRAILV 122

Query: 99  NRLKLKFRKPKKQRASTAGINRPKKPRVSVLRLKGKTLPAVQRKVRVLGRLVPGCRKEPL 158
           +R     R+ +  + ++A     +    S  R K   L AV  +VRVLG LVPGCR+  L
Sbjct: 123 SRFGTSLRRRRNTKPASALAAAIRGSGGSGRRRK---LSAVGNRVRVLGGLVPGCRRTAL 182

Query: 159 PVILEEATDYIAALEMQVRAMTALAELLS 188
           P +L+E  DYIAALEMQVRAMTAL+++LS
Sbjct: 183 PELLDETADYIAALEMQVRAMTALSKILS 199

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BLAST of CmoCh08G012510 vs. ExPASy TrEMBL
Match: A0A6J1EQM7 (transcription factor bHLH147-like OS=Cucurbita moschata OX=3662 GN=LOC111436924 PE=4 SV=1)

HSP 1 Score: 360.1 bits (923), Expect = 5.8e-96
Identity = 201/201 (100.00%), Postives = 201/201 (100.00%), Query Frame = 0


Query: 1   MASSVLSNSDRMRESSRKQKKKKNHGNRDRHQNQNHINWKSQAQKEIYSSKLVRALNQVR 60
           MASSVLSNSDRMRESSRKQKKKKNHGNRDRHQNQNHINWKSQAQKEIYSSKLVRALNQVR
Sbjct: 1   MASSVLSNSDRMRESSRKQKKKKNHGNRDRHQNQNHINWKSQAQKEIYSSKLVRALNQVR 60

Query: 61  LSPSNEAPRRGRAVREAADRILAVAAKGRTRWSRAILTNRLKLKFRKPKKQRASTAGINR 120
           LSPSNEAPRRGRAVREAADRILAVAAKGRTRWSRAILTNRLKLKFRKPKKQRASTAGINR
Sbjct: 61  LSPSNEAPRRGRAVREAADRILAVAAKGRTRWSRAILTNRLKLKFRKPKKQRASTAGINR 120

Query: 121 PKKPRVSVLRLKGKTLPAVQRKVRVLGRLVPGCRKEPLPVILEEATDYIAALEMQVRAMT 180
           PKKPRVSVLRLKGKTLPAVQRKVRVLGRLVPGCRKEPLPVILEEATDYIAALEMQVRAMT
Sbjct: 121 PKKPRVSVLRLKGKTLPAVQRKVRVLGRLVPGCRKEPLPVILEEATDYIAALEMQVRAMT 180

Query: 181 ALAELLSASTSVAGSSSAPPS 202
           ALAELLSASTSVAGSSSAPPS
Sbjct: 181 ALAELLSASTSVAGSSSAPPS 201

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BLAST of CmoCh08G012510 vs. ExPASy TrEMBL
Match: A0A6J1KED1 (transcription factor bHLH147-like OS=Cucurbita maxima OX=3661 GN=LOC111494233 PE=4 SV=1)

HSP 1 Score: 345.1 bits (884), Expect = 1.9e-91
Identity = 194/200 (97.00%), Postives = 195/200 (97.50%), Query Frame = 0


Query: 1   MASSVLSNSDRMRESSRKQKKKKNHGNRDRHQNQNHINWKSQAQKEIYSSKLVRALNQVR 60
           MASSVLSNSDRMRESSRKQKKKKNHGNRDRHQNQN INWKSQAQKEIYSSKLVRALNQVR
Sbjct: 1   MASSVLSNSDRMRESSRKQKKKKNHGNRDRHQNQNLINWKSQAQKEIYSSKLVRALNQVR 60

Query: 61  LSPSNEAPRRGRAVREAADRILAVAAKGRTRWSRAILTNRLKLKFRKPKKQRASTAGINR 120
           LSPSNEAPRRGRAVREAADRILAVAAKGRTRWSRAILTNRLKLKFRKPKKQR STAG NR
Sbjct: 61  LSPSNEAPRRGRAVREAADRILAVAAKGRTRWSRAILTNRLKLKFRKPKKQRVSTAGNNR 120

Query: 121 PKKPRVSVLRLKGKTLPAVQRKVRVLGRLVPGCRKEPLPVILEEATDYIAALEMQVRAMT 180
           PKKPRVSV RLKGKTLPAVQRKVRVLGRLVP CRKEPLPVILEEATDYIAALEMQVRAM+
Sbjct: 121 PKKPRVSVFRLKGKTLPAVQRKVRVLGRLVPSCRKEPLPVILEEATDYIAALEMQVRAMS 180

Query: 181 ALAELLSASTSVAGSSSAPP 201
           ALAELLSASTSVAGSSSAPP
Sbjct: 181 ALAELLSASTSVAGSSSAPP 200

[Close]

BLAST of CmoCh08G012510 vs. ExPASy TrEMBL
Match: A0A6J1H465 (transcription factor bHLH147-like OS=Cucurbita moschata OX=3662 GN=LOC111460328 PE=4 SV=1)

HSP 1 Score: 325.5 bits (833), Expect = 1.6e-85
Identity = 184/202 (91.09%), Postives = 193/202 (95.54%), Query Frame = 0


Query: 1   MASSVLSNSDRMRESSRKQKKKKNHGNRDRHQNQNHINWKSQAQKEIYSSKLVRALNQVR 60
           MASSV SNSDR RESSR+QKKKK+HGNRD HQNQNHI WKSQAQ+EIYSSKLVRALNQVR
Sbjct: 1   MASSVHSNSDRARESSRRQKKKKSHGNRDHHQNQNHIKWKSQAQQEIYSSKLVRALNQVR 60

Query: 61  LSPSNEAPRRGRAVREAADRILAVAAKGRTRWSRAILTNRLKLKFRKPKKQR-ASTAGIN 120
           LSP NEAPRRGRAVREAADR+LAVAAKGRTRWSRAILTNRLKLKFRKPK+QR ASTAG N
Sbjct: 61  LSPPNEAPRRGRAVREAADRVLAVAAKGRTRWSRAILTNRLKLKFRKPKRQRSASTAGNN 120

Query: 121 RPKKPRVSVLRLKGKTLPAVQRKVRVLGRLVPGCRKEPLPVILEEATDYIAALEMQVRAM 180
           R KKPRVSVLRL+GK+LPAVQRKVRVLGRLVPGCRKEPLPVILEEATDYIAALEMQVRAM
Sbjct: 121 RSKKPRVSVLRLRGKSLPAVQRKVRVLGRLVPGCRKEPLPVILEEATDYIAALEMQVRAM 180

Query: 181 TALAELLSASTSVAGSSSAPPS 202
           +ALAELLSASTS AGSSSAPP+
Sbjct: 181 SALAELLSASTSAAGSSSAPPN 202

[Close]

BLAST of CmoCh08G012510 vs. ExPASy TrEMBL
Match: A0A6J1L1P5 (transcription factor bHLH147-like OS=Cucurbita maxima OX=3661 GN=LOC111499053 PE=4 SV=1)

HSP 1 Score: 321.6 bits (823), Expect = 2.3e-84
Identity = 182/202 (90.10%), Postives = 191/202 (94.55%), Query Frame = 0


Query: 1   MASSVLSNSDRMRESSRKQKKKKNHGNRDRHQNQNHINWKSQAQKEIYSSKLVRALNQVR 60
           MASSV SNSDR RESSR+QKKKK+HGNRD HQNQNHI WKSQAQ+EIYSSKLVRALNQVR
Sbjct: 1   MASSVHSNSDRARESSRRQKKKKSHGNRDHHQNQNHIKWKSQAQQEIYSSKLVRALNQVR 60

Query: 61  LSPSNEAPRRGRAVREAADRILAVAAKGRTRWSRAILTNRLKLKFRKPKKQR-ASTAGIN 120
           LSP NE PRRGRAVREAADR+LAVAAKGRTRWSRAIL NRLKLKFRKPK+QR ASTAG N
Sbjct: 61  LSPPNEGPRRGRAVREAADRVLAVAAKGRTRWSRAILKNRLKLKFRKPKRQRSASTAGNN 120

Query: 121 RPKKPRVSVLRLKGKTLPAVQRKVRVLGRLVPGCRKEPLPVILEEATDYIAALEMQVRAM 180
           R KKPRVSVLRL+GK+LPAVQRKVRVLGRLVPGCRKEPLPVILEEATDYIAALEMQVRAM
Sbjct: 121 RSKKPRVSVLRLRGKSLPAVQRKVRVLGRLVPGCRKEPLPVILEEATDYIAALEMQVRAM 180

Query: 181 TALAELLSASTSVAGSSSAPPS 202
           +ALAELLSASTS AGSSSAPP+
Sbjct: 181 SALAELLSASTSAAGSSSAPPN 202

[Close]

BLAST of CmoCh08G012510 vs. ExPASy TrEMBL
Match: A0A0A0KCL4 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_6G327940 PE=4 SV=1)

HSP 1 Score: 310.1 bits (793), Expect = 6.9e-81
Identity = 185/206 (89.81%), Postives = 194/206 (94.17%), Query Frame = 0


Query: 1   MASSVLSNSDRMRE-SSRKQKKKKNHGNRDRHQNQN-HINWKSQAQKEIYSSKLVRALNQ 60
           MASSVLSNSDR RE SSRKQKKKK+HGNRD HQNQN HI WKSQAQ+EIYSSKLVRALNQ
Sbjct: 1   MASSVLSNSDRARESSSRKQKKKKSHGNRDHHQNQNHHIKWKSQAQQEIYSSKLVRALNQ 60

Query: 61  VRLSPSNEA-PRRGRAVREAADRILAVAAKGRTRWSRAILTNRLKLKFRK-PKKQRA-ST 120
           VRL PSNEA PRRGRAVREAADR+LAVAAKGRTRWSRAILTNRLKLKFRK PK+QR+ ST
Sbjct: 61  VRLGPSNEAPPRRGRAVREAADRVLAVAAKGRTRWSRAILTNRLKLKFRKAPKRQRSTST 120

Query: 121 AGINRPKKPRVSVLRLKGKTLPAVQRKVRVLGRLVPGCRKEPLPVILEEATDYIAALEMQ 180
           AG NR KKPRVSVLRL+GK+LPAVQRKVRVLGRLVPGCRKEPLPVILEEATDYIAALEMQ
Sbjct: 121 AGNNRSKKPRVSVLRLRGKSLPAVQRKVRVLGRLVPGCRKEPLPVILEEATDYIAALEMQ 180

Query: 181 VRAMTALAELLSASTSVAGSSSAPPS 202
           VRAM+ALAELLSASTS AGSSS+PPS
Sbjct: 181 VRAMSALAELLSASTSAAGSSSSPPS 206

[Close]

BLAST of CmoCh08G012510 vs. NCBI nr
Match: XP_022930482.1 (transcription factor bHLH147-like [Cucurbita moschata])

HSP 1 Score: 360.1 bits (923), Expect = 1.2e-95
Identity = 201/201 (100.00%), Postives = 201/201 (100.00%), Query Frame = 0


Query: 1   MASSVLSNSDRMRESSRKQKKKKNHGNRDRHQNQNHINWKSQAQKEIYSSKLVRALNQVR 60
           MASSVLSNSDRMRESSRKQKKKKNHGNRDRHQNQNHINWKSQAQKEIYSSKLVRALNQVR
Sbjct: 1   MASSVLSNSDRMRESSRKQKKKKNHGNRDRHQNQNHINWKSQAQKEIYSSKLVRALNQVR 60

Query: 61  LSPSNEAPRRGRAVREAADRILAVAAKGRTRWSRAILTNRLKLKFRKPKKQRASTAGINR 120
           LSPSNEAPRRGRAVREAADRILAVAAKGRTRWSRAILTNRLKLKFRKPKKQRASTAGINR
Sbjct: 61  LSPSNEAPRRGRAVREAADRILAVAAKGRTRWSRAILTNRLKLKFRKPKKQRASTAGINR 120

Query: 121 PKKPRVSVLRLKGKTLPAVQRKVRVLGRLVPGCRKEPLPVILEEATDYIAALEMQVRAMT 180
           PKKPRVSVLRLKGKTLPAVQRKVRVLGRLVPGCRKEPLPVILEEATDYIAALEMQVRAMT
Sbjct: 121 PKKPRVSVLRLKGKTLPAVQRKVRVLGRLVPGCRKEPLPVILEEATDYIAALEMQVRAMT 180

Query: 181 ALAELLSASTSVAGSSSAPPS 202
           ALAELLSASTSVAGSSSAPPS
Sbjct: 181 ALAELLSASTSVAGSSSAPPS 201

[Close]

BLAST of CmoCh08G012510 vs. NCBI nr
Match: XP_023514807.1 (transcription factor bHLH147-like [Cucurbita pepo subsp. pepo] >XP_023514808.1 transcription factor bHLH147-like [Cucurbita pepo subsp. pepo])

HSP 1 Score: 355.9 bits (912), Expect = 2.3e-94
Identity = 199/201 (99.00%), Postives = 200/201 (99.50%), Query Frame = 0


Query: 1   MASSVLSNSDRMRESSRKQKKKKNHGNRDRHQNQNHINWKSQAQKEIYSSKLVRALNQVR 60
           MASSVLSNSDRMRESSRKQKKKKNHGNRDRHQNQNHINWKSQAQKEIYSSKLVRALNQVR
Sbjct: 1   MASSVLSNSDRMRESSRKQKKKKNHGNRDRHQNQNHINWKSQAQKEIYSSKLVRALNQVR 60

Query: 61  LSPSNEAPRRGRAVREAADRILAVAAKGRTRWSRAILTNRLKLKFRKPKKQRASTAGINR 120
           LSPSNEAPRRGRAVREAADRILAVAAKGRTRWSRAILTNRLKLKFRKPKKQRASTAG NR
Sbjct: 61  LSPSNEAPRRGRAVREAADRILAVAAKGRTRWSRAILTNRLKLKFRKPKKQRASTAGNNR 120

Query: 121 PKKPRVSVLRLKGKTLPAVQRKVRVLGRLVPGCRKEPLPVILEEATDYIAALEMQVRAMT 180
           PKKPRVSVLRLKGKTLPAVQRKVRVLGRLVPGCRKEPLPVILEEATDYIAALEMQVRAM+
Sbjct: 121 PKKPRVSVLRLKGKTLPAVQRKVRVLGRLVPGCRKEPLPVILEEATDYIAALEMQVRAMS 180

Query: 181 ALAELLSASTSVAGSSSAPPS 202
           ALAELLSASTSVAGSSSAPPS
Sbjct: 181 ALAELLSASTSVAGSSSAPPS 201

[Close]

BLAST of CmoCh08G012510 vs. NCBI nr
Match: KAG6594020.1 (Transcription factor basic helix-loop-helix 147, partial [Cucurbita argyrosperma subsp. sororia])

HSP 1 Score: 355.1 bits (910), Expect = 3.9e-94
Identity = 199/201 (99.00%), Postives = 199/201 (99.00%), Query Frame = 0


Query: 1   MASSVLSNSDRMRESSRKQKKKKNHGNRDRHQNQNHINWKSQAQKEIYSSKLVRALNQVR 60
           MASSVLSNSDRMRESSRKQKKKKNHGNRDRHQNQNHINWKSQAQKEIYSSKLVRALNQVR
Sbjct: 1   MASSVLSNSDRMRESSRKQKKKKNHGNRDRHQNQNHINWKSQAQKEIYSSKLVRALNQVR 60

Query: 61  LSPSNEAPRRGRAVREAADRILAVAAKGRTRWSRAILTNRLKLKFRKPKKQRASTAGINR 120
           LSPSNEAPRRGRAVREAADRILAVAAKGRTRWSRAILTNRLKLKFRKPKKQRASTAG NR
Sbjct: 61  LSPSNEAPRRGRAVREAADRILAVAAKGRTRWSRAILTNRLKLKFRKPKKQRASTAGNNR 120

Query: 121 PKKPRVSVLRLKGKTLPAVQRKVRVLGRLVPGCRKEPLPVILEEATDYIAALEMQVRAMT 180
           PKKPRVSVLRLKGKTLPAVQRKVRVLGRLVPGCRKEP PVILEEATDYIAALEMQVRAMT
Sbjct: 121 PKKPRVSVLRLKGKTLPAVQRKVRVLGRLVPGCRKEPWPVILEEATDYIAALEMQVRAMT 180

Query: 181 ALAELLSASTSVAGSSSAPPS 202
           ALAELLSASTSVAGSSSAPPS
Sbjct: 181 ALAELLSASTSVAGSSSAPPS 201

[Close]

BLAST of CmoCh08G012510 vs. NCBI nr
Match: KAG7026360.1 (Transcription factor bHLH, partial [Cucurbita argyrosperma subsp. argyrosperma])

HSP 1 Score: 355.1 bits (910), Expect = 3.9e-94
Identity = 199/201 (99.00%), Postives = 199/201 (99.00%), Query Frame = 0


Query: 1   MASSVLSNSDRMRESSRKQKKKKNHGNRDRHQNQNHINWKSQAQKEIYSSKLVRALNQVR 60
           MASSVLSNSDRMRESSRKQKKKKNHGNRDRHQNQNHINWKSQAQKEIYSSKLVRALNQVR
Sbjct: 23  MASSVLSNSDRMRESSRKQKKKKNHGNRDRHQNQNHINWKSQAQKEIYSSKLVRALNQVR 82

Query: 61  LSPSNEAPRRGRAVREAADRILAVAAKGRTRWSRAILTNRLKLKFRKPKKQRASTAGINR 120
           LSPSNEAPRRGRAVREAADRILAVAAKGRTRWSRAILTNRLKLKFRKPKKQRASTAG NR
Sbjct: 83  LSPSNEAPRRGRAVREAADRILAVAAKGRTRWSRAILTNRLKLKFRKPKKQRASTAGNNR 142

Query: 121 PKKPRVSVLRLKGKTLPAVQRKVRVLGRLVPGCRKEPLPVILEEATDYIAALEMQVRAMT 180
           PKKPRVSVLRLKGKTLPAVQRKVRVLGRLVPGCRKEP PVILEEATDYIAALEMQVRAMT
Sbjct: 143 PKKPRVSVLRLKGKTLPAVQRKVRVLGRLVPGCRKEPWPVILEEATDYIAALEMQVRAMT 202

Query: 181 ALAELLSASTSVAGSSSAPPS 202
           ALAELLSASTSVAGSSSAPPS
Sbjct: 203 ALAELLSASTSVAGSSSAPPS 223

[Close]

BLAST of CmoCh08G012510 vs. NCBI nr
Match: XP_022999891.1 (transcription factor bHLH147-like [Cucurbita maxima])

HSP 1 Score: 345.1 bits (884), Expect = 4.0e-91
Identity = 194/200 (97.00%), Postives = 195/200 (97.50%), Query Frame = 0


Query: 1   MASSVLSNSDRMRESSRKQKKKKNHGNRDRHQNQNHINWKSQAQKEIYSSKLVRALNQVR 60
           MASSVLSNSDRMRESSRKQKKKKNHGNRDRHQNQN INWKSQAQKEIYSSKLVRALNQVR
Sbjct: 1   MASSVLSNSDRMRESSRKQKKKKNHGNRDRHQNQNLINWKSQAQKEIYSSKLVRALNQVR 60

Query: 61  LSPSNEAPRRGRAVREAADRILAVAAKGRTRWSRAILTNRLKLKFRKPKKQRASTAGINR 120
           LSPSNEAPRRGRAVREAADRILAVAAKGRTRWSRAILTNRLKLKFRKPKKQR STAG NR
Sbjct: 61  LSPSNEAPRRGRAVREAADRILAVAAKGRTRWSRAILTNRLKLKFRKPKKQRVSTAGNNR 120

Query: 121 PKKPRVSVLRLKGKTLPAVQRKVRVLGRLVPGCRKEPLPVILEEATDYIAALEMQVRAMT 180
           PKKPRVSV RLKGKTLPAVQRKVRVLGRLVP CRKEPLPVILEEATDYIAALEMQVRAM+
Sbjct: 121 PKKPRVSVFRLKGKTLPAVQRKVRVLGRLVPSCRKEPLPVILEEATDYIAALEMQVRAMS 180

Query: 181 ALAELLSASTSVAGSSSAPP 201
           ALAELLSASTSVAGSSSAPP
Sbjct: 181 ALAELLSASTSVAGSSSAPP 200

[Close]

BLAST of CmoCh08G012510 vs. TAIR 10
Match: AT3G17100.1 (sequence-specific DNA binding transcription factors )

HSP 1 Score: 169.9 bits (429), Expect = 2.1e-42
Identity = 110/198 (55.56%), Postives = 140/198 (70.71%), Query Frame = 0


Query: 7   SNSDRMRESSRKQKKKKNHGNRDRHQNQNHI--NWKSQAQKEIYSSKLVRALNQVRL--- 66
           SNSDR R   RK+KKK +  + ++  + +     W+S+ Q++IYS+KLV AL ++R+   
Sbjct: 19  SNSDRSR---RKRKKKSSPSSVEKSPSPSISLEKWRSEKQQQIYSTKLVHALRELRISQQ 78

Query: 67  ---SPSNEAPRRGRAVREAADRILAVAAKGRTRWSRAILTNRLKLKFRKPKKQRAS---- 126
              S S+  PR GRAVRE ADR LAVAA+G+T WSRAIL+  +KLKFRK K+QR S    
Sbjct: 79  PSSSSSSSIPRGGRAVREVADRALAVAARGKTLWSRAILSKAVKLKFRKHKRQRISNPTT 138

Query: 127 ---TAGINRPKKPRVSVLRLKGKTLPAVQRKVRVLGRLVPGCRKEPLPVILEEATDYIAA 186
              T G  R KK R +VLRLK K LPAVQRKV+VL RLVPGCRK+ LPV+LEE TDYIAA
Sbjct: 139 TTLTTGSIRSKKQRATVLRLKAKGLPAVQRKVKVLSRLVPGCRKQSLPVVLEETTDYIAA 198

Query: 187 LEMQVRAMTALAELLSAS 190
           +EMQ+R MTA+   +S+S
Sbjct: 199 MEMQIRTMTAILSAVSSS 213

[Close]

BLAST of CmoCh08G012510 vs. TAIR 10
Match: AT3G17100.2 (sequence-specific DNA binding transcription factors )

HSP 1 Score: 169.9 bits (429), Expect = 2.1e-42
Identity = 110/198 (55.56%), Postives = 140/198 (70.71%), Query Frame = 0


Query: 7   SNSDRMRESSRKQKKKKNHGNRDRHQNQNHI--NWKSQAQKEIYSSKLVRALNQVRL--- 66
           SNSDR R   RK+KKK +  + ++  + +     W+S+ Q++IYS+KLV AL ++R+   
Sbjct: 19  SNSDRSR---RKRKKKSSPSSVEKSPSPSISLEKWRSEKQQQIYSTKLVHALRELRISQQ 78

Query: 67  ---SPSNEAPRRGRAVREAADRILAVAAKGRTRWSRAILTNRLKLKFRKPKKQRAS---- 126
              S S+  PR GRAVRE ADR LAVAA+G+T WSRAIL+  +KLKFRK K+QR S    
Sbjct: 79  PSSSSSSSIPRGGRAVREVADRALAVAARGKTLWSRAILSKAVKLKFRKHKRQRISNPTT 138

Query: 127 ---TAGINRPKKPRVSVLRLKGKTLPAVQRKVRVLGRLVPGCRKEPLPVILEEATDYIAA 186
              T G  R KK R +VLRLK K LPAVQRKV+VL RLVPGCRK+ LPV+LEE TDYIAA
Sbjct: 139 TTLTTGSIRSKKQRATVLRLKAKGLPAVQRKVKVLSRLVPGCRKQSLPVVLEETTDYIAA 198

Query: 187 LEMQVRAMTALAELLSAS 190
           +EMQ+R MTA+   +S+S
Sbjct: 199 MEMQIRTMTAILSAVSSS 213

[Close]

BLAST of CmoCh08G012510 vs. TAIR 10
Match: AT3G06590.1 (basic helix-loop-helix (bHLH) DNA-binding superfamily protein )

HSP 1 Score: 163.7 bits (413), Expect = 1.5e-40
Identity = 111/214 (51.87%), Postives = 139/214 (64.95%), Query Frame = 0


Query: 3   SSVLSNSDRMRESSRKQKKKKNHGNRDRHQNQNHINWKSQAQKEIYSSKLVRALNQVRL- 62
           +S  S+  R ++ S       +  +      + H  W+S+ Q+ IYS+KL +AL QVRL 
Sbjct: 12  TSTTSDLVRRKKRSSASSAASSRSSASSVSGEIHARWRSEKQQRIYSAKLFQALQQVRLN 71

Query: 63  -----SPSNEAPRRGRAVREAADRILAVAAKGRTRWSRAILTNRLKLKFRKPKKQRASTA 122
                S S  A +RG+AVREAADR LAV+A+GRT WSRAIL NR+KLKFRK ++ RA+ A
Sbjct: 72  SSASTSSSPTAQKRGKAVREAADRALAVSARGRTLWSRAILANRIKLKFRKQRRPRATMA 131

Query: 123 ----------GINRPKKPRVSVLRLKGKTLPAVQRKVRVLGRLVPGCRKEPLPVILEEAT 182
                       NR +K RVSVLRL  K++P V RKVRVLGRLVPGC K+ +PVILEEAT
Sbjct: 132 IPAMTTVVSSSSNRSRKRRVSVLRLNKKSIPDVNRKVRVLGRLVPGCGKQSVPVILEEAT 191

Query: 183 DYIAALEMQVRAMTALAELLSASTSVAGSSSAPP 201
           DYI ALEMQVRAM +L +LLS+        SAPP
Sbjct: 192 DYIQALEMQVRAMNSLVQLLSS------YGSAPP 219

[Close]

BLAST of CmoCh08G012510 vs. TAIR 10
Match: AT3G06590.2 (basic helix-loop-helix (bHLH) DNA-binding superfamily protein )

HSP 1 Score: 163.7 bits (413), Expect = 1.5e-40
Identity = 111/214 (51.87%), Postives = 139/214 (64.95%), Query Frame = 0


Query: 3   SSVLSNSDRMRESSRKQKKKKNHGNRDRHQNQNHINWKSQAQKEIYSSKLVRALNQVRL- 62
           +S  S+  R ++ S       +  +      + H  W+S+ Q+ IYS+KL +AL QVRL 
Sbjct: 12  TSTTSDLVRRKKRSSASSAASSRSSASSVSGEIHARWRSEKQQRIYSAKLFQALQQVRLN 71

Query: 63  -----SPSNEAPRRGRAVREAADRILAVAAKGRTRWSRAILTNRLKLKFRKPKKQRASTA 122
                S S  A +RG+AVREAADR LAV+A+GRT WSRAIL NR+KLKFRK ++ RA+ A
Sbjct: 72  SSASTSSSPTAQKRGKAVREAADRALAVSARGRTLWSRAILANRIKLKFRKQRRPRATMA 131

Query: 123 ----------GINRPKKPRVSVLRLKGKTLPAVQRKVRVLGRLVPGCRKEPLPVILEEAT 182
                       NR +K RVSVLRL  K++P V RKVRVLGRLVPGC K+ +PVILEEAT
Sbjct: 132 IPAMTTVVSSSSNRSRKRRVSVLRLNKKSIPDVNRKVRVLGRLVPGCGKQSVPVILEEAT 191

Query: 183 DYIAALEMQVRAMTALAELLSASTSVAGSSSAPP 201
           DYI ALEMQVRAM +L +LLS+        SAPP
Sbjct: 192 DYIQALEMQVRAMNSLVQLLSS------YGSAPP 219

[Close]

BLAST of CmoCh08G012510 vs. TAIR 10
Match: AT1G09250.1 (basic helix-loop-helix (bHLH) DNA-binding superfamily protein )

HSP 1 Score: 124.4 bits (311), Expect = 1.0e-28
Identity = 90/202 (44.55%), Postives = 130/202 (64.36%), Query Frame = 0


Query: 1   MASSVLSNSDRMRESSRKQKKKKNHGN----RDRHQNQNHI-NWKSQAQKEIYSSKLVRA 60
           M  S+  + +   ESSR++K + +         R  N+  +  WK+   ++IY+ KLV A
Sbjct: 1   MVESLFPSIENTGESSRRKKPRISETAEAEIEARRVNEESLKRWKTNRVQQIYACKLVEA 60

Query: 61  LNQVR----LSPSNEAPR----RGRAVREAADRILAVAAKGRTRWSRAILTNRLKLKFRK 120
           L +VR     + +NE  +      R +R+ ADR+LA +A+G TRWSRAIL +R++ K +K
Sbjct: 61  LRRVRQRSSTTSNNETDKLVSGAAREIRDTADRVLAASARGTTRWSRAILASRVRAKLKK 120

Query: 121 PKKQRASTAGINRPKKPRVSVLRLKGKTLPAVQRKVRVLGRLVPGCRKEPLPVILEEATD 180
            +K + ST G  + +K      R+K   LPAV+RK+++LGRLVPGCRK  +P +L+EATD
Sbjct: 121 HRKAKKST-GNCKSRKGLTETNRIK---LPAVERKLKILGRLVPGCRKVSVPNLLDEATD 180

Query: 181 YIAALEMQVRAMTALAELLSAS 190
           YIAALEMQVRAM ALAELL+A+
Sbjct: 181 YIAALEMQVRAMEALAELLTAA 198

The following BLAST results are available for this feature:

BLAST of CmoCh08G012510 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
Q9LSN7	3.0e-41	55.56	Transcription factor bHLH147 OS=Arabidopsis thaliana OX=3702 GN=BHLH147 PE=1 SV=...	[more]
Q9C8Z9	2.2e-39	51.87	Transcription factor bHLH148 OS=Arabidopsis thaliana OX=3702 GN=BHLH148 PE=1 SV=...	[more]
O80482	1.5e-27	44.55	Transcription factor bHLH149 OS=Arabidopsis thaliana OX=3702 GN=BHLH149 PE=1 SV=...	[more]
Q9M9L6	7.7e-21	44.97	Transcription factor bHLH150 OS=Arabidopsis thaliana OX=3702 GN=BHLH150 PE=1 SV=...	[more]

BLAST of CmoCh08G012510 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A6J1EQM7	5.8e-96	100.00	transcription factor bHLH147-like OS=Cucurbita moschata OX=3662 GN=LOC111436924 ...	[more]
A0A6J1KED1	1.9e-91	97.00	transcription factor bHLH147-like OS=Cucurbita maxima OX=3661 GN=LOC111494233 PE...	[more]
A0A6J1H465	1.6e-85	91.09	transcription factor bHLH147-like OS=Cucurbita moschata OX=3662 GN=LOC111460328 ...	[more]
A0A6J1L1P5	2.3e-84	90.10	transcription factor bHLH147-like OS=Cucurbita maxima OX=3661 GN=LOC111499053 PE...	[more]
A0A0A0KCL4	6.9e-81	89.81	Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_6G327940 PE=4 SV=1	[more]

BLAST of CmoCh08G012510 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_022930482.1	1.2e-95	100.00	transcription factor bHLH147-like [Cucurbita moschata]	[more]
XP_023514807.1	2.3e-94	99.00	transcription factor bHLH147-like [Cucurbita pepo subsp. pepo] >XP_023514808.1 t...	[more]
KAG6594020.1	3.9e-94	99.00	Transcription factor basic helix-loop-helix 147, partial [Cucurbita argyrosperma...	[more]
KAG7026360.1	3.9e-94	99.00	Transcription factor bHLH, partial [Cucurbita argyrosperma subsp. argyrosperma]	[more]
XP_022999891.1	4.0e-91	97.00	transcription factor bHLH147-like [Cucurbita maxima]	[more]

BLAST of CmoCh08G012510 vs. TAIR 10


Match Name	E-value	Identity	Description
AT3G17100.1	2.1e-42	55.56	sequence-specific DNA binding transcription factors	[more]
AT3G17100.2	2.1e-42	55.56	sequence-specific DNA binding transcription factors	[more]
AT3G06590.1	1.5e-40	51.87	basic helix-loop-helix (bHLH) DNA-binding superfamily protein	[more]
AT3G06590.2	1.5e-40	51.87	basic helix-loop-helix (bHLH) DNA-binding superfamily protein	[more]
AT1G09250.1	1.0e-28	44.55	basic helix-loop-helix (bHLH) DNA-binding superfamily protein	[more]

InterPro

Analysis Name: InterPro Annotations of Cucurbita moschata (Rifu) v1
Date Performed: 2021-10-25


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 1..42
None	No IPR available	PANTHER	PTHR33124:SF78	TRANSCRIPTION FACTOR BHLH148-LIKE ISOFORM X1	coord: 15..200
IPR044660	Transcription factor IBH1-like	PANTHER	PTHR33124	TRANSCRIPTION FACTOR IBH1-LIKE 1	coord: 15..200
IPR044549	Transcription factor IBH1-like, bHLH domain	CDD	cd11444	bHLH_AtIBH1_like	coord: 128..183 e-value: 3.50715E-17 score: 70.344
IPR036638	Helix-loop-helix DNA-binding domain superfamily	SUPERFAMILY	47459	HLH, helix-loop-helix DNA-binding domain	coord: 142..189

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
CmoCh08G012510.1	CmoCh08G012510.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0006355	regulation of transcription, DNA-templated
cellular_component	GO:0005634	nucleus
molecular_function	GO:0046983	protein dimerization activity
molecular_function	GO:0000976	transcription cis-regulatory region binding