CmoCh08G011450 (gene) Cucurbita moschata (Rifu) v1
Overview
Sequences
The following sequences are available for this feature:
Legend: exonCDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below.ATGATGAACAAGCTCAGGTGAACTACAAAACCTAAAACTTAAGCCCACCTTGTATGTAAATTTTGATTTTTTTTTACCTTTCATTGAAACTGATGACGGTGTTATATGTTGGGATCATCAAATTTTGCCCCCTCTCATCATCATTACCCCTTGTGTCTTCTTGATCTTTTGGTCTGATTTTCTTTCCTGTACAAATTAAAACTTCTGGTATGGCAGTTCATTTGGTCTTGTTATTTAGGGTTCTTAGCACATGAACCTCCTAAAAAAAATTTTAAATTCTTGCGTTTGGAAAAAGGCTGTAATTTTCAACCCTACCCACCCCAATTTTGGCTCTCCCAATCTTTACTTATTTTTTGTAATATTCTTTCAAAACTTTCGAAGAGTATAGTAGCATGGAATAATTCATTTTCTGCTTTGTTCTTTACAATTTTACATTTTAATTTTATTTCTCACTTTGTTTTAGTTCATTTATCCTAACTTTTATTATTTTCTTTAATTGTTTATTTATTTATACTCTTTGTTTTGTTTGTTATATAAATGCTAGTTGTTCAATCATATAATATTCTTATTTTTCGGTGGCTTAATCATTAACCGTGTTTGACTTAAAACAATTTTTTGTTCGGTGACCTCTTAGCTAAAATGACCGTGTTGGTTTCTGGGAATATTTTTCACTCTTAATACTGTTTATTGATAAATGTTGTGGAAATGAAAAAAAGAAAATCTCGATGAAAATAGTTCTTTTAGAACTCAACAATCGCGGGAATGAAAATCGAATCATCAACCTCTAACACGTTTAATGTTGTAACTATTCGGCTAAAACGAATGCTAATAGAAGAGGCCCAATAACCTTGTTGGGCTAAGTGTAAGGCCTGGATCGAATCCAATTTGTAGGAGTCAGCCCAAATAACCTTATTGGGCCCAGAGTAGGGCCTGTATCGAAGTCCATTAGTAGGAGTCAGCCCAAATAACCTTATTGGGCCCAGAGTAGGGCCTTTATCGAAGTCCATTTGTAAGAGTCGGCCCAGATAACCTTATTGGGCCCAGAGTAGGGCCTTTATCGAAGTCCATTAGTAGGAGTCAGCCCAAATAATCTTATTGGGCCCATAGTAGGGCCTTTATCGAAGTCCATTAGTAGGAGTCAGCCCAAATAGCCTTATTGGGCCCAGAGTAGGGCCTTTATCGAAGTCCATTTGTAGGAGTCAACCCAAATAACCTTATTGGGCCCAGTAGAAGGCCTGTATCGAATCCCATTTGTAGGGGTCAGCGCAAACTATATGGGTATAAAATTGAAATTTCAATATAATAGAGGAGGCCCACTAATCTTATTGGGCCCAGAGTAAGGCCTGTGTCGGTTCCCTTTTGCACGCATCAGCGCACACTTTAAAGCCCAGCCCATCTACCCGCGCAAAATTTCCAGAAGTGGAAGTTCCATCAAGTGCGATCAAATCTTTCATTTCGTGATGACACGCGAAACTGAATTACAGTCTCTGCAAGACAAGAAGAGAAAGAAGAGCATCATGCAGAATTCTTGAGGTCGAGAGTAAAGCAATTTCTTGCTTGTTTTCGTGTTGTGCATTTCTCACATGCGGTTTCTGCTCCTCCATCGTCTCTGGAATCTTGAGGTGCTCCGCTAGGCTTGCATACTGCGGCCTGTTCGGAGTTTCCTTGGTGGTTTCATGGGTTCTCAGAGAGTTCGCAGCTCCTCTGACGGAGAAGATGCCATGTGAGTTTCATCACTTGCTTTAATTTTCTGTTATTCTAGCCGATTTTCAATTGTTTATTCGTACGTTCGATTTTCTTGGCTTCTTATGCTGAATATTGCGAGTGTCGTTATTGTAGCGATAGATTGTGGTTTCAATGATTCGCGAGCTTAATTTTTGGTTGTTTTTTTGTGTGCTATGTTGATTCCGAGTTTAAATCAATCGCAGTATGCTCGTCGGTTGTGAATTACGGTGTTTTCTGTAATTTTGGTTAAATGTGGCAACTCATTGCATCGCTGGGACCTCGGTCTAATTTTTCAAGGAATGATGAATTCACTCGAGAAAATAGGATACTTGAATTTAGAATTATTGTTGTGGCGGGCGGTTATTGAATGTATCCGGGATCCATATAGGTTGAAATGGAAGTTGGTTAAAGTTTTGATTAGTCAAAGAAGCAAGTCGTCTCTCAATTCTCAGGTTCTTTCAAAAAGAATAGAAAAGGTCATCTCCCAAGTTGAGTAAATGTCAGTTTGTCTCTTCTAAAAGTACTAATAAATAATAGGTAGACTCCCTAATTGGATCGAATAGGATCATCTTACTACAAATTTGTTTTAAAGTTCTTGGAACAAATACTATCCATTCCATAATTGATCTAAATAGGTTATATTTACTATTGTTTTCACTCTCTAATGCTACCTTATGCTTTCTATTTATCTTCTTAAATCCAGTAGTATTTAAAATTAATGGCAACTAGAGATATTGTCTTCTTTGGGCTTTCCTTCAAGATTTTAAAACGGGTCTACTAGGAAGAGATTTCCACATCCTTATAAGAAATGCTTCGTTCTCCTCTCCAACCGATGTGGGACCTCATACGAAAAGTGATGGTTAAATGTTATGAGAAGTATCAGGGCATCTGTACATATCGTGAATTAGAATTTGCAGGAGATATGATTGAATTAAACTTAAAAGCGAAGCATAAAAGATTTGATTGATTCTAAGGCTGACTTGAGGCTATTAAGTTTATGAAATGGTGCTTTCTGGAACTGTGATCCTTAAGATTCCAAAGTCACTGGCTAATTTCGATGTTATATGATGGAAATGCCAATGGTTCTATATTCTTCATTTTAACTTTTTAATAATCTCAGTTATGATTTTTGTCTTCGTAGATGTATAGAATGAAGATTCATGAACAAGATCAATAAAAAATTCTTCTGATATTGAGATGCAGTGTAAGAAAGAGAGGGAATTGAGTTGAGAGAACTGTTGTGTAAGGAATTCCTTACACTTCGTGCAGATACCTAAGACTAAACTTTCAGAAGAGTTGATTACGAATTGAGTAGCTTAAGGAAGAGGACTTGCAAAGTTTATTTGAAGAACATTTAGTAATATCGTATATTTGTACAAATTATGATTGCATCACAGGAAAAAAAGGGGAGAATATTTGGAACTCTGAATTTTTAAGGGGAAAAGATTGTTCAGTGCTGACATTATTGGCTTCTAATTTCTCATTGTAAGATCAGGTGGGATAACCTCTTCTCAAAGCAGAAGGACTTGAAGGATGGAAAGAACAAAAGGAATGAGAGGGAAAGGGAAAACCTGTCAGTTACTCCTATACATTCTTCCACCTGAGCTATGCTATGGCTGGGTTAGCCTGAATGAGAGCTCGAACCTTGTAGACATTGGCTGGACGTCGGTTTGGGAACGAATCTGCCCAGAGTGGGTCACTTCTGCTCTATATATTTGGTCACTTGTCACCCCTCCCACCATCAATTAAGATAGAGGAATGGAGCATTCCTTATAAGGTGTGGAAAACCTCTCTCTAACAAACGTGTTTTAAAACCTTCAGGGAAAGTCTGATAGGAAAAGCTCAAAGAGGACAATATCTGCTAGCGGTGGGCGTGGTTGTTACGCATTTTTCTTGATCGTGAGTTCTTTTACGTCTGTCATTCTGTTCCGAGTGTATGATTCACATACTTGACTTTTGGGCATCTTTTTAATTCCTTACCCATTCTGCTTGTTTTTCAGCATCCTTTGATGCTCTTTTAATAGTGGTATTGTTTCTACACCAAATCAAATATTTATTTATAATATCCAAATGGATAAGCTTTCTCTTTCACCTTTTACTTTATTTGCCACTTGTTCAAAGTTGAAATAGAAAATTTGATTTTCTTTAGGTATTTTGAATTGATTTCCAATTTTATTGGAATCTTTAAATGGTTATTACCATTTAAAAAAAAAAAAAGAATCACTTAAAATCATTTAAAAAAATTTTAAAAAATTTCCAGATCAAACTTTTATGTTTTATTTATTGAACTTTTTTTTTATAAAGTATGATATAATCTTCTACAAAAAAAAAAAAAAAAAAAAAAAANTGTTTTATTTATTGAACTTTTTTTTTATAAAGTATGATATAATCTTCTACAAAAAAAAAAAAAAGAAGAAAGAATATTAAATTACAAAAGCCAAACAAAAAAATCCCTAGAAGTTAAAAAATTTATGTATAAATCATTTTTGTTTAAAAAAAACAAAAAAAAAACATTCATTTTAAAAAATAATAATTAAAATAAACATCTTCCCTCATTTTAATTACCTTTATTTTTAGAGAATCATTAATTAATTTAACATCACGTGAACGCTTGGAAGCTCAATAGTCCAATTTAATTTCACTTTATTTCATTTACTTTTCCGCAAATAATAATAATAATAAGCCTTTATTTATTATTTTTCGTTGGAAACGAAAGTAGATGAAAAAATATATAAATAATATATCGTCTTTCACCATTCTCAGCCACTCTCCTCCGTGGCGCGTGTGTGATCCTCAAGCAGACGGTTCACGTTCGCCGGTCCGTCACCACCACTTCGCTAACGTGCGCCACTCTTCTTCTTCTTCTTCTTCTTCTTCTTCTTCCTTCTCAATCTTTCTTTTCTCTCATAGTCCCCTTTTTACAGGAAGATCCCTAATTTTGCCCTAATTGTGAACTCCATTCATTCCAATCTCTAACTGGGCTTTCTATAGAACATGCGCAATCTTCTGGTTCCGACAACCGCCATGCCTCCGTCCTCAATTCTCACCTCATCGTCGTCAATTTCCAAATCCAAGACTTGTGCAAACCCTAGCCCTAGCAATTCCCTTCTCTGTAAACACTCTCCATCCGCAACCCTTGATCTTCTTATCCTCATTCTCGTTCTGTTTTCCGGTACCTTTCTTGTAACGTCATATTTCTCTTACATTTTCAACTCTCTTTCGATTCTCTTGTCGTATTCGGCCCTGCAGCTTCCTCAATTTCCGTTTCCGTTTATTGTTGGGTTTTTGTTGTTTTTCTGTGTGATTGTTGGTGTGTTTGAGATTTGTTGTGGCGCTAGATCGAGGAAATGCGCGAAGCCGGGATGTAAAGGGTTGAAGAAGGCTATGGAGTTTGATCTGCAATTGCAAACGGAGGAGTGTGTGAAGGGTGGGTCGAAGGAGATTGATAAATTGCCGTGGAAGGGAGGTAGTGAGGCCAACCCGGATTATGAGTGCTTGAGGTCCGAGCTGAGGAAGATGGCACCACCCAATGGTCGAGCTATTTTGCTCTTTCGGGCGCGCTGTGGCTGCCCCATCGCGAAGCTTGAAGGCTGGGGGACTAAGCGCGGGCGGCGGCATAAGAAGTGA ATGATGAACAAGCTCAGTCTCTGCAAGACAAGAAGAGAAAGAAGAGCATCATGCAGAATTCTTGAGGTCGAGAGTAAAGCAATTTCTTGCTTGTTTTCGTGTTGTGCATTTCTCACATGCGGTTTCTGCTCCTCCATCGTCTCTGGAATCTTGAGGTGCTCCGCTAGGCTTGCATACTGCGGCCTGTTCGGAGTTTCCTTGGTGGTTTCATGGGTTCTCAGAGAGTTCGCAGCTCCTCTGACGGAGAAGATGCCATCCACTCTCCTCCGTGGCGCGTGTGTGATCCTCAAGCAGACGGTTCACGTTCGCCGGTCCGTCACCACCACTTCGCTAACGTGCGCCACTCTTCTTCTTCTTCTTCTTCTTCTTCTTCTTCCTTCTCAATCTTTCTTTTCTCTCATAAACATGCGCAATCTTCTGGTTCCGACAACCGCCATGCCTCCGTCCTCAATTCTCACCTCATCGTCGTCAATTTCCAAATCCAAGACTTGTGCAAACCCTAGCCCTAGCAATTCCCTTCTCTGTAAACACTCTCCATCCGCAACCCTTGATCTTCTTATCCTCATTCTCGTTCTGTTTTCCGGTACCTTTCTTGTAACGTCATATTTCTCTTACATTTTCAACTCTCTTTCGATTCTCTTGTCGTATTCGGCCCTGCAGCTTCCTCAATTTCCGTTTCCGTTTATTGTTGGGTTTTTGTTGTTTTTCTGTGTGATTGTTGGTGTGTTTGAGATTTGTTGTGGCGCTAGATCGAGGAAATGCGCGAAGCCGGGATGTAAAGGGTTGAAGAAGGCTATGGAGTTTGATCTGCAATTGCAAACGGAGGAGTGTGTGAAGGGTGGGTCGAAGGAGATTGATAAATTGCCGTGGAAGGGAGGTAGTGAGGCCAACCCGGATTATGAGTGCTTGAGGTCCGAGCTGAGGAAGATGGCACCACCCAATGGTCGAGCTATTTTGCTCTTTCGGGCGCGCTGTGGCTGCCCCATCGCGAAGCTTGAAGGCTGGGGGACTAAGCGCGGGCGGCGGCATAAGAAGTGA ATGATGAACAAGCTCAGTCTCTGCAAGACAAGAAGAGAAAGAAGAGCATCATGCAGAATTCTTGAGGTCGAGAGTAAAGCAATTTCTTGCTTGTTTTCGTGTTGTGCATTTCTCACATGCGGTTTCTGCTCCTCCATCGTCTCTGGAATCTTGAGGTGCTCCGCTAGGCTTGCATACTGCGGCCTGTTCGGAGTTTCCTTGGTGGTTTCATGGGTTCTCAGAGAGTTCGCAGCTCCTCTGACGGAGAAGATGCCATCCACTCTCCTCCGTGGCGCGTGTGTGATCCTCAAGCAGACGGTTCACGTTCGCCGGTCCGTCACCACCACTTCGCTAACGTGCGCCACTCTTCTTCTTCTTCTTCTTCTTCTTCTTCTTCCTTCTCAATCTTTCTTTTCTCTCATAAACATGCGCAATCTTCTGGTTCCGACAACCGCCATGCCTCCGTCCTCAATTCTCACCTCATCGTCGTCAATTTCCAAATCCAAGACTTGTGCAAACCCTAGCCCTAGCAATTCCCTTCTCTGTAAACACTCTCCATCCGCAACCCTTGATCTTCTTATCCTCATTCTCGTTCTGTTTTCCGGTACCTTTCTTGTAACGTCATATTTCTCTTACATTTTCAACTCTCTTTCGATTCTCTTGTCGTATTCGGCCCTGCAGCTTCCTCAATTTCCGTTTCCGTTTATTGTTGGGTTTTTGTTGTTTTTCTGTGTGATTGTTGGTGTGTTTGAGATTTGTTGTGGCGCTAGATCGAGGAAATGCGCGAAGCCGGGATGTAAAGGGTTGAAGAAGGCTATGGAGTTTGATCTGCAATTGCAAACGGAGGAGTGTGTGAAGGGTGGGTCGAAGGAGATTGATAAATTGCCGTGGAAGGGAGGTAGTGAGGCCAACCCGGATTATGAGTGCTTGAGGTCCGAGCTGAGGAAGATGGCACCACCCAATGGTCGAGCTATTTTGCTCTTTCGGGCGCGCTGTGGCTGCCCCATCGCGAAGCTTGAAGGCTGGGGGACTAAGCGCGGGCGGCGGCATAAGAAGTGA MMNKLSLCKTRRERRASCRILEVESKAISCLFSCCAFLTCGFCSSIVSGILRCSARLAYCGLFGVSLVVSWVLREFAAPLTEKMPSTLLRGACVILKQTVHVRRSVTTTSLTCATLLLLLLLLLLPSQSFFSLINMRNLLVPTTAMPPSSILTSSSSISKSKTCANPSPSNSLLCKHSPSATLDLLILILVLFSGTFLVTSYFSYIFNSLSILLSYSALQLPQFPFPFIVGFLLFFCVIVGVFEICCGARSRKCAKPGCKGLKKAMEFDLQLQTEECVKGGSKEIDKLPWKGGSEANPDYECLRSELRKMAPPNGRAILLFRARCGCPIAKLEGWGTKRGRRHKK Homology
BLAST of CmoCh08G011450 vs. ExPASy Swiss-Prot
Match: P0C8Q9 (Uncharacterized protein At5g19025 OS=Arabidopsis thaliana OX=3702 GN=At5g19025 PE=2 SV=3) HSP 1 Score: 247.7 bits (631), Expect = 2.0e-64 Identity = 138/236 (58.47%), Postives = 163/236 (69.07%), Query Frame = 0
BLAST of CmoCh08G011450 vs. ExPASy TrEMBL
Match: A0A6J1EWI4 (uncharacterized protein At5g19025-like isoform X2 OS=Cucurbita moschata OX=3662 GN=LOC111436777 PE=4 SV=1) HSP 1 Score: 413.3 bits (1061), Expect = 9.9e-112 Identity = 210/210 (100.00%), Postives = 210/210 (100.00%), Query Frame = 0
BLAST of CmoCh08G011450 vs. ExPASy TrEMBL
Match: A0A6J1ER23 (uncharacterized protein At5g19025-like isoform X1 OS=Cucurbita moschata OX=3662 GN=LOC111436777 PE=4 SV=1) HSP 1 Score: 411.8 bits (1057), Expect = 2.9e-111 Identity = 209/209 (100.00%), Postives = 209/209 (100.00%), Query Frame = 0
BLAST of CmoCh08G011450 vs. ExPASy TrEMBL
Match: A0A6J1KGM5 (uncharacterized protein At5g19025-like isoform X2 OS=Cucurbita maxima OX=3661 GN=LOC111494167 PE=4 SV=1) HSP 1 Score: 411.0 bits (1055), Expect = 4.9e-111 Identity = 209/210 (99.52%), Postives = 209/210 (99.52%), Query Frame = 0
BLAST of CmoCh08G011450 vs. ExPASy TrEMBL
Match: A0A6J1KI58 (uncharacterized protein At5g19025-like isoform X1 OS=Cucurbita maxima OX=3661 GN=LOC111494167 PE=4 SV=1) HSP 1 Score: 409.5 bits (1051), Expect = 1.4e-110 Identity = 208/209 (99.52%), Postives = 208/209 (99.52%), Query Frame = 0
BLAST of CmoCh08G011450 vs. ExPASy TrEMBL
Match: A0A0A0KEK4 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_6G238650 PE=4 SV=1) HSP 1 Score: 390.6 bits (1002), Expect = 6.9e-105 Identity = 198/209 (94.74%), Postives = 202/209 (96.65%), Query Frame = 0
BLAST of CmoCh08G011450 vs. NCBI nr
Match: XP_022930275.1 (uncharacterized protein At5g19025-like isoform X2 [Cucurbita moschata]) HSP 1 Score: 413.3 bits (1061), Expect = 2.1e-111 Identity = 210/210 (100.00%), Postives = 210/210 (100.00%), Query Frame = 0
BLAST of CmoCh08G011450 vs. NCBI nr
Match: XP_023513615.1 (uncharacterized protein At5g19025-like isoform X2 [Cucurbita pepo subsp. pepo]) HSP 1 Score: 413.3 bits (1061), Expect = 2.1e-111 Identity = 210/210 (100.00%), Postives = 210/210 (100.00%), Query Frame = 0
BLAST of CmoCh08G011450 vs. NCBI nr
Match: KAG7026261.1 (hypothetical protein SDJN02_12760 [Cucurbita argyrosperma subsp. argyrosperma]) HSP 1 Score: 413.3 bits (1061), Expect = 2.1e-111 Identity = 210/210 (100.00%), Postives = 210/210 (100.00%), Query Frame = 0
BLAST of CmoCh08G011450 vs. NCBI nr
Match: XP_022930274.1 (uncharacterized protein At5g19025-like isoform X1 [Cucurbita moschata]) HSP 1 Score: 411.8 bits (1057), Expect = 6.0e-111 Identity = 209/209 (100.00%), Postives = 209/209 (100.00%), Query Frame = 0
BLAST of CmoCh08G011450 vs. NCBI nr
Match: XP_023513614.1 (uncharacterized protein At5g19025-like isoform X1 [Cucurbita pepo subsp. pepo]) HSP 1 Score: 411.8 bits (1057), Expect = 6.0e-111 Identity = 209/209 (100.00%), Postives = 209/209 (100.00%), Query Frame = 0
BLAST of CmoCh08G011450 vs. TAIR 10
Match: AT3G06180.1 (Ribosomal protein L34e superfamily protein ) HSP 1 Score: 257.3 bits (656), Expect = 1.8e-68 Identity = 138/217 (63.59%), Postives = 166/217 (76.50%), Query Frame = 0
BLAST of CmoCh08G011450 vs. TAIR 10
Match: AT5G19025.1 (Ribosomal protein L34e superfamily protein ) HSP 1 Score: 247.7 bits (631), Expect = 1.4e-65 Identity = 138/236 (58.47%), Postives = 163/236 (69.07%), Query Frame = 0
BLAST of CmoCh08G011450 vs. TAIR 10
Match: AT3G01170.1 (Ribosomal protein L34e superfamily protein ) HSP 1 Score: 111.3 bits (277), Expect = 1.6e-24 Identity = 75/198 (37.88%), Postives = 113/198 (57.07%), Query Frame = 0
BLAST of CmoCh08G011450 vs. TAIR 10
Match: AT5G15260.1 (Ribosomal protein L34e superfamily protein ) HSP 1 Score: 106.3 bits (264), Expect = 5.0e-23 Identity = 83/226 (36.73%), Postives = 126/226 (55.75%), Query Frame = 0
BLAST of CmoCh08G011450 vs. TAIR 10
Match: AT3G06170.1 (Serinc-domain containing serine and sphingolipid biosynthesis protein ) HSP 1 Score: 85.5 bits (210), Expect = 9.1e-17 Identity = 41/56 (73.21%), Postives = 45/56 (80.36%), Query Frame = 0
The following BLAST results are available for this feature:
InterPro
Analysis Name: InterPro Annotations of Cucurbita moschata (Rifu) v1
Date Performed: 2021-10-25
Relationships
The following mRNA feature(s) are a part of this gene:
GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
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