CmoCh08G010370 (gene) Cucurbita moschata (Rifu) v1

Overview


Name	CmoCh08G010370
Type	gene
Organism	Cucurbita moschata (Cucurbita moschata (Rifu) v1)
Description	heterogeneous nuclear ribonucleoprotein 1-like
Location	Cmo_Chr08: 6727187 .. 6729385 (+)
RNA-Seq Expression	CmoCh08G010370
Synteny	CmoCh08G010370

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonfive_prime_UTRCDSpolypeptide

Hold the cursor over a type above to highlight its positions in the sequence below.

CTCAGATTCACCAGAGCTCTCTCTCTCTTCCCCTTTTCTGTTCTCTTTCTCTTTTCAAGCCCCAGTCGGCTGCAAACCCTCTTCCGAAATCCGTAACCCATAAACGAAATTCAATTTTTGCAGGAAGAACAGAGCCGTGAATCGATTTTTCCATTTGGGGTTTTTGAGAAACAGAGAGAAAAAGGGGCAATGGATTCGGATCAGGGGAAGCTTTTTATTGGTGGGATTTCATGGGAGACCTCTGAGGATAAGTTAAAGGACCACTTCAACAGCTATGGTGAAGTGATGCATACCGTTGTTATGAGGGATAAGATCACTAGCAAACCTAGAGGGTTTGGATTCGTCGTCTTTGCAGATCCCTCTGTTCTTGATCGAGTTCTCCAGGATAAGCACACTATCGATGGTAAAACGGTGCGTCAGAATCTTGTTTTTGTTTTCGTTATTCGATGTCGAGATTTTGGGTCTTTTTGGTTCGTCATAATAGCATTTGTGTTCCTTTGATTTGGCCTGGATACCTCATTTGAGTTCTAGGGGTTTTCGATTCCATAATGATATTAAATACTTTCCTTTTGGGTATCACATATCTGATGTTATTGGCTTTTTAGGGTTGCTCATATTGATGCATTTGCACCTCTCGTTACTGAGCTTTTTAGGGTTGTTTTTGGTGTAATTTGTTGGTTTGGTGCATTGCTTTTTTACGAGGAGAGGTATTGACAAAAGGGTCGGTTGTGTTCTGCATTTTCGTTTCATCATAGCTTATGTTTTCATATGATTGTGTATATTCTCTTGATAGTTAGTTCTTGGTAGGAATCTGTTGACTTCAACTGTGAAGTGTTGTCACGAGTTTTCTTTTGTTAACATTAGTGAAACCGAAACCGTTACCTGTCGGTAGATCTGTTTCGGTTTCGGGGCTAGTATTTACACTGTTGCTATAACTTTCTCTCATTTGGTATCTTATCTTCTGGAAATATCTTACCTTCCTATCGAGTCGTTTTTTTGAAGAACTTTTTAGCATTTGTAATTTATATTCTTTTCTAGGTTGAGGCTAAGAGGGCCTTATCACGAGAGGAACAGCAGACCCCTGCGAGAGCGGGCAATTTGAACGCTACTAGAAATTCTGGTGGTGGAAATATGAGAACCAAAAAAATTTTTGTTGGGGGATTGCCTCCAACATTGACTGAAGAAGGGTTTAAGGAGTATTTTGAGACTTATGGCGATGTAACTGATGTAGTAGTCATGTACGATCAAAATACTAGGCGTCCACGGGGATTTGGATTTATATCTTTTGATACTGAAGAAGCTGTTGACAGAGTTTTGCACAAGACATTTCATGATTTGAATGGTAAACAAGTAGAAGTTAAGCGTGCCCTTCCCAAAGATGCCAATCCAGGTGCAGGTGGCCGCTCGATGGGTGGCAGTGCAGGCAGTGGTGGTTATCAAACTTATGGGTCATCTGGTGGTGTCAATTCAAATTCGTATGATAGTCGTATGGATTCGAATAGGTACATGCAATCTCAGGGCTCTAGTGGAGGTTTCCCACCTTATGGATCCTCTGGATATAACAATCCCGGGTATGGTTATGGTTCATCAAACAATGGTATGGGATACGGTGGTTATGGAAACTATAGTGGTTCAAATACTGGGTATGGTGCCCCTTCTGCTGTTGCTTATGGTAACCCAAATGTCGCCAATGCTGGTTATGCAAGCGGTCCTCAAGGTGGACCTAGAAGTTCGTGGTCCGCTCAAGCTCCCTCTGGATATGGAGCCATGGGGTATGGGAATGCAGCTCCGTGGGGAGGTGCCCCTGGGGGCAATGCTGGAGCTGGCAGTGGTGGACCTGGATCTGCACCCACAGGTCATTCTCCCGGTGGAGCTGCTGGGTATGGCAATCAGGGTTATGGATATGGTGGGTTTGGGAATCAAGGTTATGGTTACGGTGGAGGTGATGGTTCGTACGGGAGTCAATCTGGTTACGGTACAGGTGGAGGACGTTCTGGTAGTGCCTCAAATAGCAATGTCGGGGGTGGTCCAAGTGGGGGAGAATTACAAGGGAACAGTGGTGGTTACATGAATAGTGGCTATGGCGATGCTAATGGAAACACTGGTTATGGAAATGCTGGTTGGAGATCCGATGGCGGGCAAGTAGGTTATACCGGTGGTTATGGTGGCGCACAAGCTCGACACTCTCAACAACAGTAA

mRNA sequence

CTCAGATTCACCAGAGCTCTCTCTCTCTTCCCCTTTTCTGTTCTCTTTCTCTTTTCAAGCCCCAGTCGGCTGCAAACCCTCTTCCGAAATCCGTAACCCATAAACGAAATTCAATTTTTGCAGGAAGAACAGAGCCGTGAATCGATTTTTCCATTTGGGGTTTTTGAGAAACAGAGAGAAAAAGGGGCAATGGATTCGGATCAGGGGAAGCTTTTTATTGGTGGGATTTCATGGGAGACCTCTGAGGATAAGTTAAAGGACCACTTCAACAGCTATGGTGAAGTGATGCATACCGTTGTTATGAGGGATAAGATCACTAGCAAACCTAGAGGGTTTGGATTCGTCGTCTTTGCAGATCCCTCTGTTCTTGATCGAGTTCTCCAGGATAAGCACACTATCGATGGTAAAACGGTTGAGGCTAAGAGGGCCTTATCACGAGAGGAACAGCAGACCCCTGCGAGAGCGGGCAATTTGAACGCTACTAGAAATTCTGGTGGTGGAAATATGAGAACCAAAAAAATTTTTGTTGGGGGATTGCCTCCAACATTGACTGAAGAAGGGTTTAAGGAGTATTTTGAGACTTATGGCGATGTAACTGATGTAGTAGTCATGTACGATCAAAATACTAGGCGTCCACGGGGATTTGGATTTATATCTTTTGATACTGAAGAAGCTGTTGACAGAGTTTTGCACAAGACATTTCATGATTTGAATGGTAAACAAGTAGAAGTTAAGCGTGCCCTTCCCAAAGATGCCAATCCAGGTGCAGGTGGCCGCTCGATGGGTGGCAGTGCAGGCAGTGGTGGTTATCAAACTTATGGGTCATCTGGTGGTGTCAATTCAAATTCGTATGATAGTCGTATGGATTCGAATAGGTACATGCAATCTCAGGGCTCTAGTGGAGGTTTCCCACCTTATGGATCCTCTGGATATAACAATCCCGGGTATGGTTATGGTTCATCAAACAATGGTATGGGATACGGTGGTTATGGAAACTATAGTGGTTCAAATACTGGGTATGGTGCCCCTTCTGCTGTTGCTTATGGTAACCCAAATGTCGCCAATGCTGGTTATGCAAGCGGTCCTCAAGGTGGACCTAGAAGTTCGTGGTCCGCTCAAGCTCCCTCTGGATATGGAGCCATGGGGTATGGGAATGCAGCTCCGTGGGGAGGTGCCCCTGGGGGCAATGCTGGAGCTGGCAGTGGTGGACCTGGATCTGCACCCACAGGTCATTCTCCCGGTGGAGCTGCTGGGTATGGCAATCAGGGTTATGGATATGGTGGGTTTGGGAATCAAGGTTATGGTTACGGTGGAGGTGATGGTTCGTACGGGAGTCAATCTGGTTACGGTACAGGTGGAGGACGTTCTGGTAGTGCCTCAAATAGCAATGTCGGGGGTGGTCCAAGTGGGGGAGAATTACAAGGGAACAGTGGTGGTTACATGAATAGTGGCTATGGCGATGCTAATGGAAACACTGGTTATGGAAATGCTGGTTGGAGATCCGATGGCGGGCAAGTAGGTTATACCGGTGGTTATGGTGGCGCACAAGCTCGACACTCTCAACAACAGTAA

Coding sequence (CDS)

ATGGATTCGGATCAGGGGAAGCTTTTTATTGGTGGGATTTCATGGGAGACCTCTGAGGATAAGTTAAAGGACCACTTCAACAGCTATGGTGAAGTGATGCATACCGTTGTTATGAGGGATAAGATCACTAGCAAACCTAGAGGGTTTGGATTCGTCGTCTTTGCAGATCCCTCTGTTCTTGATCGAGTTCTCCAGGATAAGCACACTATCGATGGTAAAACGGTTGAGGCTAAGAGGGCCTTATCACGAGAGGAACAGCAGACCCCTGCGAGAGCGGGCAATTTGAACGCTACTAGAAATTCTGGTGGTGGAAATATGAGAACCAAAAAAATTTTTGTTGGGGGATTGCCTCCAACATTGACTGAAGAAGGGTTTAAGGAGTATTTTGAGACTTATGGCGATGTAACTGATGTAGTAGTCATGTACGATCAAAATACTAGGCGTCCACGGGGATTTGGATTTATATCTTTTGATACTGAAGAAGCTGTTGACAGAGTTTTGCACAAGACATTTCATGATTTGAATGGTAAACAAGTAGAAGTTAAGCGTGCCCTTCCCAAAGATGCCAATCCAGGTGCAGGTGGCCGCTCGATGGGTGGCAGTGCAGGCAGTGGTGGTTATCAAACTTATGGGTCATCTGGTGGTGTCAATTCAAATTCGTATGATAGTCGTATGGATTCGAATAGGTACATGCAATCTCAGGGCTCTAGTGGAGGTTTCCCACCTTATGGATCCTCTGGATATAACAATCCCGGGTATGGTTATGGTTCATCAAACAATGGTATGGGATACGGTGGTTATGGAAACTATAGTGGTTCAAATACTGGGTATGGTGCCCCTTCTGCTGTTGCTTATGGTAACCCAAATGTCGCCAATGCTGGTTATGCAAGCGGTCCTCAAGGTGGACCTAGAAGTTCGTGGTCCGCTCAAGCTCCCTCTGGATATGGAGCCATGGGGTATGGGAATGCAGCTCCGTGGGGAGGTGCCCCTGGGGGCAATGCTGGAGCTGGCAGTGGTGGACCTGGATCTGCACCCACAGGTCATTCTCCCGGTGGAGCTGCTGGGTATGGCAATCAGGGTTATGGATATGGTGGGTTTGGGAATCAAGGTTATGGTTACGGTGGAGGTGATGGTTCGTACGGGAGTCAATCTGGTTACGGTACAGGTGGAGGACGTTCTGGTAGTGCCTCAAATAGCAATGTCGGGGGTGGTCCAAGTGGGGGAGAATTACAAGGGAACAGTGGTGGTTACATGAATAGTGGCTATGGCGATGCTAATGGAAACACTGGTTATGGAAATGCTGGTTGGAGATCCGATGGCGGGCAAGTAGGTTATACCGGTGGTTATGGTGGCGCACAAGCTCGACACTCTCAACAACAGTAA

Protein sequence

MDSDQGKLFIGGISWETSEDKLKDHFNSYGEVMHTVVMRDKITSKPRGFGFVVFADPSVLDRVLQDKHTIDGKTVEAKRALSREEQQTPARAGNLNATRNSGGGNMRTKKIFVGGLPPTLTEEGFKEYFETYGDVTDVVVMYDQNTRRPRGFGFISFDTEEAVDRVLHKTFHDLNGKQVEVKRALPKDANPGAGGRSMGGSAGSGGYQTYGSSGGVNSNSYDSRMDSNRYMQSQGSSGGFPPYGSSGYNNPGYGYGSSNNGMGYGGYGNYSGSNTGYGAPSAVAYGNPNVANAGYASGPQGGPRSSWSAQAPSGYGAMGYGNAAPWGGAPGGNAGAGSGGPGSAPTGHSPGGAAGYGNQGYGYGGFGNQGYGYGGGDGSYGSQSGYGTGGGRSGSASNSNVGGGPSGGELQGNSGGYMNSGYGDANGNTGYGNAGWRSDGGQVGYTGGYGGAQARHSQQQ

Homology

[Close]

BLAST of CmoCh08G010370 vs. ExPASy Swiss-Prot
Match: Q8W034 (Heterogeneous nuclear ribonucleoprotein 1 OS=Arabidopsis thaliana OX=3702 GN=RNP1 PE=1 SV=1)

HSP 1 Score: 445.7 bits (1145), Expect = 6.5e-124
Identity = 270/459 (58.82%), Postives = 313/459 (68.19%), Query Frame = 0


Query: 1   MDSDQGKLFIGGISWETSEDKLKDHFNSYGEVMHTVVMRDKITSKPRGFGFVVFADPSVL 60
           MDSDQGKLF+GGISWET EDKL++HF +YGEV   +VMRDK+T +PRGFGFV+F+DPSVL
Sbjct: 1   MDSDQGKLFVGGISWETDEDKLREHFTNYGEVSQAIVMRDKLTGRPRGFGFVIFSDPSVL 60

Query: 61  DRVLQDKHTIDGKTVEAKRALSREEQQTPARAGNLNATRNSGG-GNMRTKKIFVGGLPPT 120
           DRVLQ+KH+ID + V+ KRA+SREEQQ   R GNLN +R+SGG    +TKKIFVGGLPPT
Sbjct: 61  DRVLQEKHSIDTREVDVKRAMSREEQQVSGRTGNLNTSRSSGGDAYNKTKKIFVGGLPPT 120

Query: 121 LTEEGFKEYFETYGDVTDVVVMYDQNTRRPRGFGFISFDTEEAVDRVLHKTFHDLNGKQV 180
           LT+E F++YFE YG VTDV +MYDQ T RPRGFGF+SFD+E+AVD VLHKTFHDL+GKQV
Sbjct: 121 LTDEEFRQYFEVYGPVTDVAIMYDQATNRPRGFGFVSFDSEDAVDSVLHKTFHDLSGKQV 180

Query: 181 EVKRALPKDANPGAGGRSMGGSAGSGGYQTYGSSGGVNSNSYDSRMDSNRYMQSQGSSGG 240
           EVKRALPKDANPG GGRSMGG  GSGGYQ YG     N +SYD RMDSNR++Q Q    G
Sbjct: 181 EVKRALPKDANPGGGGRSMGG-GGSGGYQGYGG----NESSYDGRMDSNRFLQHQSVGNG 240

Query: 241 FPPYGSSGYNNPGYGYGSSNNGMGYGGYGNYSGSNTGYGAPSAVAYGNPNVANAGYASGP 300
            P YGSSGY   G GYG+ +NG GYG YG Y+GS  GYGA +   YG  N+  AGY S  
Sbjct: 241 LPSYGSSGY---GAGYGNGSNGAGYGAYGGYTGSAGGYGAGATAGYGATNIPGAGYGSST 300

Query: 301 QGGPRSSWSAQAPSGYGAMGYGNAAPWGGAPGGNAGAGSGGPGSAPTGHSPGGAAGYGNQ 360
              PR+SW   A SGYG  GYG+         G A +G G PG+AP   SP   +GY NQ
Sbjct: 301 GVAPRNSWDTPASSGYGNPGYGS---------GAAHSGYGVPGAAPPTQSP---SGYSNQ 360

Query: 361 GYGYGGFGNQGYGYGGGDGSYGSQSGYGTGGGRSGSASNSNVGGGPSGGELQGNSGGYMN 420
           GYGYG       GY G D  YG+Q+ YG  GGR     ++N G           SGGYM 
Sbjct: 361 GYGYG-------GYSGSDSGYGNQAAYGVVGGRPSGGGSNNPG-----------SGGYMG 411

Query: 421 SGYGDANGNTGYGNAGWRSDGGQVGYTGGYGGAQARHSQ 459
            GYGD +         WRSD  Q GY GGY   Q R  Q
Sbjct: 421 GGYGDGS---------WRSDPSQ-GYGGGYNDGQGRQGQ 411

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BLAST of CmoCh08G010370 vs. ExPASy Swiss-Prot
Match: P51990 (Heterogeneous nuclear ribonucleoprotein A2 homolog 2 OS=Xenopus laevis OX=8355 PE=2 SV=1)

HSP 1 Score: 162.5 bits (410), Expect = 1.1e-38
Identity = 127/361 (35.18%), Postives = 184/361 (50.97%), Query Frame = 0


Query: 7   KLFIGGISWETSEDKLKDHFNSYGEVMHTVVMRDKITSKPRGFGFVVFADPSVLDRVLQD 66
           KLFIGG+S+ET+E+ L++ +  +G++   VVMRD  + + RGFGFV F+  + +D  +  
Sbjct: 10  KLFIGGLSFETTEESLRNFYEQWGQLTDCVVMRDPASKRSRGFGFVTFSCMNEVDAAMSA 69

Query: 67  K-HTIDGKTVEAKRALSREEQQTPARAGNLNATRNSGGGNMRTKKIFVGGLPPTLTEEGF 126
           + HTIDG+ VE KRA++REE   P             G ++  KK+FVGG+     E   
Sbjct: 70  RPHTIDGRVVEPKRAVAREESAKP-------------GAHVTVKKLFVGGIKEDTEEHHL 129

Query: 127 KEYFETYGDVTDVVVMYDQNTRRPRGFGFISFDTEEAVDRVLHKTFHDLNGKQVEVKRAL 186
           +EYFE YG +    ++ D+ + + RGFGF++F+  + VD+++ + +H +NG   EV++AL
Sbjct: 130 REYFEEYGKIESTEIITDKQSGKKRGFGFVTFNDHDPVDKIVLQKYHTINGHNAEVRKAL 189

Query: 187 PK--------------------------DANPGAGGRSMGGSAGSGGYQTYGSS-GGVNS 246
            K                          +   G GG   GGS G GG + YG    G   
Sbjct: 190 SKQEMQDVQNTRNNRGGNFGFGDSRGGGNFGSGPGGNFRGGSDGYGGGRGYGDGYNGYGG 249

Query: 247 NSYDSRMDSNRYMQSQGSSGGFPPYGSSGYNNPGYGYGSS--NNGMGY-GGYGNYSGSNT 306
               + +D  + + S G+ GG P YG+ G    GYG G S  N G GY GGY NY G N 
Sbjct: 250 GQGGTYLDEKQNLYSSGNFGGGPSYGAGG-GRGGYGGGPSYGNQGGGYGGGYDNYGGGNY 309

Query: 307 GYGAPSAVAYGNPNVANAGY----ASGPQGGPRSSWSAQAPSGYGAMGYGNAAPWGGAPG 333
           G G  +   +GN N  ++ Y    + G  GG RS         YG  G G+ A  GG  G
Sbjct: 310 G-GGGNYNDFGNYNQQSSSYGPMKSGGNFGGNRSMGGPYGGGNYGP-GNGSGASGGGGYG 354

[Close]

BLAST of CmoCh08G010370 vs. ExPASy Swiss-Prot
Match: P51989 (Heterogeneous nuclear ribonucleoprotein A2 homolog 1 OS=Xenopus laevis OX=8355 PE=2 SV=1)

HSP 1 Score: 158.7 bits (400), Expect = 1.6e-37
Identity = 128/356 (35.96%), Postives = 180/356 (50.56%), Query Frame = 0


Query: 7   KLFIGGISWETSEDKLKDHFNSYGEVMHTVVMRDKITSKPRGFGFVVFADPSVLDRVLQD 66
           KLFIGG+S+ET+E+ L++++  +G +   VVMRD  + + RGFGFV F+  + +D  +  
Sbjct: 10  KLFIGGLSFETTEESLRNYYEQWGTLTDCVVMRDPASKRSRGFGFVTFSCMNEVDAAMAT 69

Query: 67  K-HTIDGKTVEAKRALSREEQQTPARAGNLNATRNSGGGNMRTKKIFVGGLPPTLTEEGF 126
           + HTIDG+ VE KRA++REE   P             G ++  KK+FVGG+     E   
Sbjct: 70  RPHTIDGRVVEPKRAVAREESAKP-------------GAHVTVKKLFVGGIKEDTEEHHL 129

Query: 127 KEYFETYGDVTDVVVMYDQNTRRPRGFGFISFDTEEAVDRVLHKTFHDLNGKQVEVKRAL 186
           +EYFE YG +  + ++ D+ + + RGF F++FD  + VD+++ + +H +NG   EV++AL
Sbjct: 130 REYFEEYGKIDSIEIITDKQSGKKRGFAFVTFDDHDPVDKIVLQKYHTINGHNAEVRKAL 189

Query: 187 PKD-------------ANPGAGGRSMGGSAGS-------GGYQTYGSSGGVNSNSYDSRM 246
            K               N G G    GG+ GS       GG   YG   G   N Y+   
Sbjct: 190 SKQEMQDVQNTRNNRGGNFGFGDSRGGGNFGSGPGGNFRGGSDGYGGGRGYGDNGYNGYG 249

Query: 247 DSNRYMQSQGSSGGFPPYGSSGYNNPGYGYGSSNNGMGY-GGYGNYSGSNTGYGAPSAVA 306
                 Q  G+ GG P YG       G G G  N G GY GGY NY G N G G  +   
Sbjct: 250 GG----QGGGNYGGGPSYGGGRGGGYGGGAGYGNQGGGYGGGYDNYGGGNYG-GGGNYND 309

Query: 307 YGNPNVANAGYASGPQGGPRSSWSAQAPSGYGAMGYGNAAPWGGAPGGNAGAGSGG 341
           +GN N  ++ Y     GG   ++      G G  G GN  P G A GGN G G GG
Sbjct: 310 FGNYNQQSSNYGPMKSGG---NFGGNRSMGGGPYGGGNYGP-GNASGGN-GGGYGG 342

[Close]

BLAST of CmoCh08G010370 vs. ExPASy Swiss-Prot
Match: Q8BG05 (Heterogeneous nuclear ribonucleoprotein A3 OS=Mus musculus OX=10090 GN=Hnrnpa3 PE=1 SV=1)

HSP 1 Score: 143.3 bits (360), Expect = 6.9e-33
Identity = 130/379 (34.30%), Postives = 183/379 (48.28%), Query Frame = 0


Query: 7   KLFIGGISWETSEDKLKDHFNSYGEVMHTVVMRDKITSKPRGFGFVVFADPSVLDRVLQD 66
           KLFIGG+S+ET++D L++HF  +G +   VVMRD  T + RGFGFV ++    +D  +  
Sbjct: 36  KLFIGGLSFETTDDSLREHFEKWGTLTDCVVMRDPQTKRSRGFGFVTYSCVEEVDAAMCA 95

Query: 67  K-HTIDGKTVEAKRALSREEQQTPARAGNLNATRNSGGGNMRTKKIFVGGLPPTLTEEGF 126
           + H +DG+ VE KRA+SRE+   P             G ++  KKIFVGG+     E   
Sbjct: 96  RPHKVDGRVVEPKRAVSREDSVKP-------------GAHLTVKKIFVGGIKEDTEEYNL 155

Query: 127 KEYFETYGDVTDVVVMYDQNTRRPRGFGFISFDTEEAVDRVLHKTFHDLNGKQVEVKRAL 186
           ++YFE YG +  + VM D+ + + RGF F++FD  + VD+++ + +H +NG   EVK+AL
Sbjct: 156 RDYFEKYGKIETIEVMEDRQSGKKRGFAFVTFDDHDTVDKIVVQKYHTINGHNCEVKKAL 215

Query: 187 PKDANPGAGGRSMGGSAGSGGYQTYGSSGGVNSNSYDSRMDSNRYMQSQGSSGGFPPYGS 246
            K     AG +  G   GSG +   G + G    ++             G+ GG   YG 
Sbjct: 216 SKQEMQSAGSQ-RGRGGGSGNFMGRGGNFGGGGGNFG----------RGGNFGGRGGYGG 275

Query: 247 SGYNNPGYGYGSSNNGM-GYGGYGNYSGSNTGYGAPSAVAYGNPNVANAGYASGPQGGPR 306
            G  + G  YG  + G  G+GG G   G   GY +      G P   N G   G  GG  
Sbjct: 276 GGGGSRG-SYGGGDGGYNGFGGDGGNYGGGPGYSSRGGYGGGGPGYGNQGGGYGGGGG-- 335

Query: 307 SSWSAQAPSGYGAMGYGNAAPWGGAPGGNAGAGSGGPGSAPTGHSPGGAAGYGNQGYGYG 366
                    GY   G      +GG    N      G   +  G   GG+ G  + G  YG
Sbjct: 336 ------GYDGYNEGGNFGGGNYGGGGNYNDFGNYSGQQQSNYGPMKGGSFGGRSSGSPYG 377

Query: 367 GFGNQGYGYGGGDGSYGSQ 384
           G    GYG GGG G YGS+
Sbjct: 396 G----GYGSGGGSGGYGSR 377

[Close]

BLAST of CmoCh08G010370 vs. ExPASy Swiss-Prot
Match: Q6URK4 (Heterogeneous nuclear ribonucleoprotein A3 OS=Rattus norvegicus OX=10116 GN=Hnrnpa3 PE=1 SV=1)

HSP 1 Score: 143.3 bits (360), Expect = 6.9e-33
Identity = 130/379 (34.30%), Postives = 183/379 (48.28%), Query Frame = 0


Query: 7   KLFIGGISWETSEDKLKDHFNSYGEVMHTVVMRDKITSKPRGFGFVVFADPSVLDRVLQD 66
           KLFIGG+S+ET++D L++HF  +G +   VVMRD  T + RGFGFV ++    +D  +  
Sbjct: 36  KLFIGGLSFETTDDSLREHFEKWGTLTDCVVMRDPQTKRSRGFGFVTYSCVEEVDAAMCA 95

Query: 67  K-HTIDGKTVEAKRALSREEQQTPARAGNLNATRNSGGGNMRTKKIFVGGLPPTLTEEGF 126
           + H +DG+ VE KRA+SRE+   P             G ++  KKIFVGG+     E   
Sbjct: 96  RPHKVDGRVVEPKRAVSREDSVKP-------------GAHLTVKKIFVGGIKEDTEEYNL 155

Query: 127 KEYFETYGDVTDVVVMYDQNTRRPRGFGFISFDTEEAVDRVLHKTFHDLNGKQVEVKRAL 186
           ++YFE YG +  + VM D+ + + RGF F++FD  + VD+++ + +H +NG   EVK+AL
Sbjct: 156 RDYFEKYGKIETIEVMEDRQSGKKRGFAFVTFDDHDTVDKIVVQKYHTINGHNCEVKKAL 215

Query: 187 PKDANPGAGGRSMGGSAGSGGYQTYGSSGGVNSNSYDSRMDSNRYMQSQGSSGGFPPYGS 246
            K     AG +  G   GSG +   G + G    ++             G+ GG   YG 
Sbjct: 216 SKQEMQSAGSQ-RGRGGGSGNFMGRGGNFGGGGGNFG----------RGGNFGGRGGYGG 275

Query: 247 SGYNNPGYGYGSSNNGM-GYGGYGNYSGSNTGYGAPSAVAYGNPNVANAGYASGPQGGPR 306
            G  + G  YG  + G  G+GG G   G   GY +      G P   N G   G  GG  
Sbjct: 276 GGGGSRG-SYGGGDGGYNGFGGDGGNYGGGPGYSSRGGYGGGGPGYGNQGGGYGGGGG-- 335

Query: 307 SSWSAQAPSGYGAMGYGNAAPWGGAPGGNAGAGSGGPGSAPTGHSPGGAAGYGNQGYGYG 366
                    GY   G      +GG    N      G   +  G   GG+ G  + G  YG
Sbjct: 336 ------GYDGYNEGGNFGGGNYGGGGNYNDFGNYSGQQQSNYGPMKGGSFGGRSSGSPYG 377

Query: 367 GFGNQGYGYGGGDGSYGSQ 384
           G    GYG GGG G YGS+
Sbjct: 396 G----GYGSGGGSGGYGSR 377

[Close]

BLAST of CmoCh08G010370 vs. ExPASy TrEMBL
Match: A0A6J1HK79 (heterogeneous nuclear ribonucleoprotein 1-like OS=Cucurbita moschata OX=3662 GN=LOC111464301 PE=4 SV=1)

HSP 1 Score: 865.5 bits (2235), Expect = 9.8e-248
Identity = 460/460 (100.00%), Postives = 460/460 (100.00%), Query Frame = 0


Query: 1   MDSDQGKLFIGGISWETSEDKLKDHFNSYGEVMHTVVMRDKITSKPRGFGFVVFADPSVL 60
           MDSDQGKLFIGGISWETSEDKLKDHFNSYGEVMHTVVMRDKITSKPRGFGFVVFADPSVL
Sbjct: 1   MDSDQGKLFIGGISWETSEDKLKDHFNSYGEVMHTVVMRDKITSKPRGFGFVVFADPSVL 60

Query: 61  DRVLQDKHTIDGKTVEAKRALSREEQQTPARAGNLNATRNSGGGNMRTKKIFVGGLPPTL 120
           DRVLQDKHTIDGKTVEAKRALSREEQQTPARAGNLNATRNSGGGNMRTKKIFVGGLPPTL
Sbjct: 61  DRVLQDKHTIDGKTVEAKRALSREEQQTPARAGNLNATRNSGGGNMRTKKIFVGGLPPTL 120

Query: 121 TEEGFKEYFETYGDVTDVVVMYDQNTRRPRGFGFISFDTEEAVDRVLHKTFHDLNGKQVE 180
           TEEGFKEYFETYGDVTDVVVMYDQNTRRPRGFGFISFDTEEAVDRVLHKTFHDLNGKQVE
Sbjct: 121 TEEGFKEYFETYGDVTDVVVMYDQNTRRPRGFGFISFDTEEAVDRVLHKTFHDLNGKQVE 180

Query: 181 VKRALPKDANPGAGGRSMGGSAGSGGYQTYGSSGGVNSNSYDSRMDSNRYMQSQGSSGGF 240
           VKRALPKDANPGAGGRSMGGSAGSGGYQTYGSSGGVNSNSYDSRMDSNRYMQSQGSSGGF
Sbjct: 181 VKRALPKDANPGAGGRSMGGSAGSGGYQTYGSSGGVNSNSYDSRMDSNRYMQSQGSSGGF 240

Query: 241 PPYGSSGYNNPGYGYGSSNNGMGYGGYGNYSGSNTGYGAPSAVAYGNPNVANAGYASGPQ 300
           PPYGSSGYNNPGYGYGSSNNGMGYGGYGNYSGSNTGYGAPSAVAYGNPNVANAGYASGPQ
Sbjct: 241 PPYGSSGYNNPGYGYGSSNNGMGYGGYGNYSGSNTGYGAPSAVAYGNPNVANAGYASGPQ 300

Query: 301 GGPRSSWSAQAPSGYGAMGYGNAAPWGGAPGGNAGAGSGGPGSAPTGHSPGGAAGYGNQG 360
           GGPRSSWSAQAPSGYGAMGYGNAAPWGGAPGGNAGAGSGGPGSAPTGHSPGGAAGYGNQG
Sbjct: 301 GGPRSSWSAQAPSGYGAMGYGNAAPWGGAPGGNAGAGSGGPGSAPTGHSPGGAAGYGNQG 360

Query: 361 YGYGGFGNQGYGYGGGDGSYGSQSGYGTGGGRSGSASNSNVGGGPSGGELQGNSGGYMNS 420
           YGYGGFGNQGYGYGGGDGSYGSQSGYGTGGGRSGSASNSNVGGGPSGGELQGNSGGYMNS
Sbjct: 361 YGYGGFGNQGYGYGGGDGSYGSQSGYGTGGGRSGSASNSNVGGGPSGGELQGNSGGYMNS 420

Query: 421 GYGDANGNTGYGNAGWRSDGGQVGYTGGYGGAQARHSQQQ 461
           GYGDANGNTGYGNAGWRSDGGQVGYTGGYGGAQARHSQQQ
Sbjct: 421 GYGDANGNTGYGNAGWRSDGGQVGYTGGYGGAQARHSQQQ 460

[Close]

BLAST of CmoCh08G010370 vs. ExPASy TrEMBL
Match: A0A6J1KMT7 (heterogeneous nuclear ribonucleoprotein 1-like OS=Cucurbita maxima OX=3661 GN=LOC111494753 PE=4 SV=1)

HSP 1 Score: 858.6 bits (2217), Expect = 1.2e-245
Identity = 457/460 (99.35%), Postives = 457/460 (99.35%), Query Frame = 0


Query: 1   MDSDQGKLFIGGISWETSEDKLKDHFNSYGEVMHTVVMRDKITSKPRGFGFVVFADPSVL 60
           MDSDQGKLFIGGISWETSEDKLKDHFNSYGEVMHTVVMRDKITSKPRGFGFVVFADPSVL
Sbjct: 1   MDSDQGKLFIGGISWETSEDKLKDHFNSYGEVMHTVVMRDKITSKPRGFGFVVFADPSVL 60

Query: 61  DRVLQDKHTIDGKTVEAKRALSREEQQTPARAGNLNATRNSGGGNMRTKKIFVGGLPPTL 120
           DRVLQDKHTIDGKTVEAKRALSREEQQTPARAGNLNATRNSGGGNMRTKKIFVGGLPPTL
Sbjct: 61  DRVLQDKHTIDGKTVEAKRALSREEQQTPARAGNLNATRNSGGGNMRTKKIFVGGLPPTL 120

Query: 121 TEEGFKEYFETYGDVTDVVVMYDQNTRRPRGFGFISFDTEEAVDRVLHKTFHDLNGKQVE 180
           TEEGFKEYFETYGDVTDVVVMYDQNTRRPRGFGFISFDTEEAVDRVLHKTFHDLNGKQVE
Sbjct: 121 TEEGFKEYFETYGDVTDVVVMYDQNTRRPRGFGFISFDTEEAVDRVLHKTFHDLNGKQVE 180

Query: 181 VKRALPKDANPGAGGRSMGGSAGSGGYQTYGSSGGVNSNSYDSRMDSNRYMQSQGSSGGF 240
           VKRALPKDANPGAGGRSMGGSA SGGYQTYGSSGGVNSNSYDSRMDSNRYMQSQGSSGGF
Sbjct: 181 VKRALPKDANPGAGGRSMGGSASSGGYQTYGSSGGVNSNSYDSRMDSNRYMQSQGSSGGF 240

Query: 241 PPYGSSGYNNPGYGYGSSNNGMGYGGYGNYSGSNTGYGAPSAVAYGNPNVANAGYASGPQ 300
           PPYGSSGYNNPGYGYGSSNNGMGYGGYGNYSGSNTGYGAPSAVAYGNPNVANAGYASGPQ
Sbjct: 241 PPYGSSGYNNPGYGYGSSNNGMGYGGYGNYSGSNTGYGAPSAVAYGNPNVANAGYASGPQ 300

Query: 301 GGPRSSWSAQAPSGYGAMGYGNAAPWGGAPGGNAGAGSGGPGSAPTGHSPGGAAGYGNQG 360
           GGPRSSWSAQAPSGYGAMGYGNAAPWGGAPGGNAGAGSGGPGSAPTGHSPGGAAGYGNQG
Sbjct: 301 GGPRSSWSAQAPSGYGAMGYGNAAPWGGAPGGNAGAGSGGPGSAPTGHSPGGAAGYGNQG 360

Query: 361 YGYGGFGNQGYGYGGGDGSYGSQSGYGTGGGRSGSASNSNVGGGPSGGELQGNSGGYMNS 420
           YGYGGFGNQGYGYGGGDGSYGSQSGYGTGGGRSGSASNSNVGGGPSGGELQGNSGGYMNS
Sbjct: 361 YGYGGFGNQGYGYGGGDGSYGSQSGYGTGGGRSGSASNSNVGGGPSGGELQGNSGGYMNS 420

Query: 421 GYGDANGNTGYGNAGWRSDGGQVGYTGGYGGAQARHSQQQ 461
           GYGDANGNTGYGNAGWRSDGGQVGYTGGYGG QAR SQQQ
Sbjct: 421 GYGDANGNTGYGNAGWRSDGGQVGYTGGYGGGQARQSQQQ 460

[Close]

BLAST of CmoCh08G010370 vs. ExPASy TrEMBL
Match: A0A6J1CDB1 (heterogeneous nuclear ribonucleoprotein 1-like OS=Momordica charantia OX=3673 GN=LOC111009685 PE=4 SV=1)

HSP 1 Score: 798.5 bits (2061), Expect = 1.5e-227
Identity = 425/464 (91.59%), Postives = 441/464 (95.04%), Query Frame = 0


Query: 1   MDSDQGKLFIGGISWETSEDKLKDHFNSYGEVMHTVVMRDKITSKPRGFGFVVFADPSVL 60
           MDSDQGKLFIGGISWETSEDKLKD+F +YG+V+HTVVMRDKITS+PRGFGFVVFADP++L
Sbjct: 1   MDSDQGKLFIGGISWETSEDKLKDYFGNYGDVLHTVVMRDKITSRPRGFGFVVFADPAIL 60

Query: 61  DRVLQDKHTIDGKTVEAKRALSREEQQTPARAGNLNATRN----SGGGNMRTKKIFVGGL 120
           DRVLQ+KHTIDGKTVEAKRALSREEQQTPARAGN NATRN    SGGG+MRTKKIFVGGL
Sbjct: 61  DRVLQEKHTIDGKTVEAKRALSREEQQTPARAGNSNATRNSGGGSGGGSMRTKKIFVGGL 120

Query: 121 PPTLTEEGFKEYFETYGDVTDVVVMYDQNTRRPRGFGFISFDTEEAVDRVLHKTFHDLNG 180
           PPTLTEEGFKEYFE YG VTDVVVMYDQNTRRPRGFGFISFDTEEAVDRVLHKTFHDLNG
Sbjct: 121 PPTLTEEGFKEYFEAYGHVTDVVVMYDQNTRRPRGFGFISFDTEEAVDRVLHKTFHDLNG 180

Query: 181 KQVEVKRALPKDANPGAGGRSMGGSAGSGGYQTYGSSGGVNSNSYDSRMDSNRYMQSQGS 240
           KQVEVKRALPKDANPGAGGRSMGG AG GGYQ+YGSSGG NSNSYD+RMDSNRYMQSQGS
Sbjct: 181 KQVEVKRALPKDANPGAGGRSMGGGAGGGGYQSYGSSGGANSNSYDNRMDSNRYMQSQGS 240

Query: 241 SGGFPPYGSSGYNNPGYGYGSSNNGMGYGGYGNYSGSNTGYGAPSAVAYGNPNVANAGYA 300
           SGGFPPYGSSGYNNPGYGYGSSNNGMGYGGYGNYSGSNTGYGAP+AVAYGNPNVANAGY 
Sbjct: 241 SGGFPPYGSSGYNNPGYGYGSSNNGMGYGGYGNYSGSNTGYGAPAAVAYGNPNVANAGYG 300

Query: 301 SGPQGGPRSSWSAQAPSGYGAMGYGNAAPWGGAPGGNAGAGSGGPGSAPTGHSPGGAAGY 360
           SGPQGGPRS+WS QAPSGYGAMGYGNAAPWGGA G NAGAGSGGPGSAPTGHSPGGAAGY
Sbjct: 301 SGPQGGPRSTWSGQAPSGYGAMGYGNAAPWGGAAGNNAGAGSGGPGSAPTGHSPGGAAGY 360

Query: 361 GNQGYGYGGFGNQGYGYGGGDGSYGSQSGYGTGGGRSGSASNSNVGGGPSGGELQGNSGG 420
           GNQGYGYGGFGNQGYGYGGGDGSYGSQSGYG  GGRSGSASNSNVGGGPSGGELQGNSGG
Sbjct: 361 GNQGYGYGGFGNQGYGYGGGDGSYGSQSGYGAAGGRSGSASNSNVGGGPSGGELQGNSGG 420

Query: 421 YMNSGYGDANGNTGYGNAGWRSDGGQVGYTGGYGGAQARHSQQQ 461
           YM +GYGDANGN+GYGNA WRSDGGQVGYTGGY   QAR +QQQ
Sbjct: 421 YMGNGYGDANGNSGYGNAAWRSDGGQVGYTGGYAAGQARQAQQQ 464

[Close]

BLAST of CmoCh08G010370 vs. ExPASy TrEMBL
Match: A0A6J1H3Z2 (heterogeneous nuclear ribonucleoprotein 1-like OS=Cucurbita moschata OX=3662 GN=LOC111460283 PE=4 SV=1)

HSP 1 Score: 794.3 bits (2050), Expect = 2.8e-226
Identity = 429/465 (92.26%), Postives = 440/465 (94.62%), Query Frame = 0


Query: 1   MDSDQGKLFIGGISWETSEDKLKDHFNSYGEVMHTVVMRDKITSKPRGFGFVVFADPSVL 60
           MDSDQGKLFIGGISWETSEDKLKD+F++YGEVMHTVVMRDKITS+PRGFGFVVF+DPSVL
Sbjct: 1   MDSDQGKLFIGGISWETSEDKLKDYFSNYGEVMHTVVMRDKITSRPRGFGFVVFSDPSVL 60

Query: 61  DRVLQDKHTIDGKTVEAKRALSREEQQTPARAGNLNATRNS----GGGNMRTKKIFVGGL 120
           DRVLQDKHTIDGKTVEAKRALSREEQQTPARA N NATRNS    GGGNMRTKKIFVGGL
Sbjct: 61  DRVLQDKHTIDGKTVEAKRALSREEQQTPARASNSNATRNSGGGGGGGNMRTKKIFVGGL 120

Query: 121 PPTLTEEGFKEYFETYGDVTDVVVMYDQNTRRPRGFGFISFDTEEAVDRVLHKTFHDLNG 180
           PPTLTEEGFKEYFE YG VTDVVVMYDQNTRRPRGFGFISFDTEEAVDRVLHKTFHDLNG
Sbjct: 121 PPTLTEEGFKEYFEAYGHVTDVVVMYDQNTRRPRGFGFISFDTEEAVDRVLHKTFHDLNG 180

Query: 181 KQVEVKRALPKDANPGAGGRSMGGSAGSGGYQTYGSSGGVNSNSYDSRMDSNRYMQSQGS 240
           KQVEVKRALPKDANPGAGGRSMGG    GGYQ YGSSGGVNSNSYDS MDS+RYMQSQGS
Sbjct: 181 KQVEVKRALPKDANPGAGGRSMGG----GGYQGYGSSGGVNSNSYDSHMDSSRYMQSQGS 240

Query: 241 SGGFPPYGSSGYNNPGYGYGSSNNGMGYGGYGNYSGSNTGYGAPSAVAYGNPNVANAGYA 300
            GGFPPYGSSGY+NPGYGYGSSNNGMGYGGYGNYSGSNTGYGAP+AVAYGNPN ANAGY 
Sbjct: 241 GGGFPPYGSSGYSNPGYGYGSSNNGMGYGGYGNYSGSNTGYGAPAAVAYGNPNAANAGYG 300

Query: 301 SGPQGGPRSSWSAQAPSGYGAMGYGNAAPWGGAPGGNAGAGSGGPGSAPTGHSPGGAAGY 360
           SGPQGGPRSSWS QAPSGYGAMGYGNAAPWGGAPGGNAGAGSGGPGSAPTGHSPGGAAGY
Sbjct: 301 SGPQGGPRSSWSTQAPSGYGAMGYGNAAPWGGAPGGNAGAGSGGPGSAPTGHSPGGAAGY 360

Query: 361 GNQGYGYGGFGNQGYGYGGGDGSYGSQSGYGTGGGRSGSASNSNVGGGPSGGELQGNSGG 420
           GNQGYGYGG GNQGYGYGGGDGSYGSQSGYGTGGGRSGSASNSNVGGGPSGGE+QGNSGG
Sbjct: 361 GNQGYGYGGLGNQGYGYGGGDGSYGSQSGYGTGGGRSGSASNSNVGGGPSGGEIQGNSGG 420

Query: 421 YMNSGYGDANG-NTGYGNAGWRSDGGQVGYTGGYGGAQARHSQQQ 461
           YM +GYGDANG NTGYGNA WRSDGGQVGYTGGY G QAR +QQQ
Sbjct: 421 YMGNGYGDANGNNTGYGNAAWRSDGGQVGYTGGYAGGQARQAQQQ 461

[Close]

BLAST of CmoCh08G010370 vs. ExPASy TrEMBL
Match: A0A6J1KWS0 (heterogeneous nuclear ribonucleoprotein 1-like OS=Cucurbita maxima OX=3661 GN=LOC111498928 PE=4 SV=1)

HSP 1 Score: 786.9 bits (2031), Expect = 4.4e-224
Identity = 426/464 (91.81%), Postives = 437/464 (94.18%), Query Frame = 0


Query: 1   MDSDQGKLFIGGISWETSEDKLKDHFNSYGEVMHTVVMRDKITSKPRGFGFVVFADPSVL 60
           MDSDQGKLFIGGISWETSEDKLKD+F++YGEVMHTVVMRDKITS+PRGFGFVVF+DPSVL
Sbjct: 1   MDSDQGKLFIGGISWETSEDKLKDYFSNYGEVMHTVVMRDKITSRPRGFGFVVFSDPSVL 60

Query: 61  DRVLQDKHTIDGKTVEAKRALSREEQQTPARAGNLNATRNS---GGGNMRTKKIFVGGLP 120
           DRVLQDKHTIDGKTVEAKRALSREEQQTPARA N NATRNS   GGGNMRTKKIFVGGLP
Sbjct: 61  DRVLQDKHTIDGKTVEAKRALSREEQQTPARASNSNATRNSGGGGGGNMRTKKIFVGGLP 120

Query: 121 PTLTEEGFKEYFETYGDVTDVVVMYDQNTRRPRGFGFISFDTEEAVDRVLHKTFHDLNGK 180
           PTLTEEGFKEYFE YG VTDVVVMYDQNTRRPRGFGFISFDTEEAVDRVLHKTFHDLNGK
Sbjct: 121 PTLTEEGFKEYFEAYGHVTDVVVMYDQNTRRPRGFGFISFDTEEAVDRVLHKTFHDLNGK 180

Query: 181 QVEVKRALPKDANPGAGGRSMGGSAGSGGYQTYGSSGGVNSNSYDSRMDSNRYMQSQGSS 240
           QVEVKRALPKDANPGAGG SMGGS    GYQ YGSSGGVNSNSYDSRMDS+RYMQSQGS 
Sbjct: 181 QVEVKRALPKDANPGAGGHSMGGS----GYQGYGSSGGVNSNSYDSRMDSSRYMQSQGSG 240

Query: 241 GGFPPYGSSGYNNPGYGYGSSNNGMGYGGYGNYSGSNTGYGAPSAVAYGNPNVANAGYAS 300
           GGFPPYGSSGY+NPGYGYGSSNNGMGYGGYG+YS SNTGYGAP+AVAYGNPN ANAGY S
Sbjct: 241 GGFPPYGSSGYSNPGYGYGSSNNGMGYGGYGSYSSSNTGYGAPAAVAYGNPNAANAGYGS 300

Query: 301 GPQGGPRSSWSAQAPSGYGAMGYGNAAPWGGAPGGNAGAGSGGPGSAPTGHSPGGAAGYG 360
           GPQGGPRSSWS QAPSGYGAMGYGNAAPWGGAPGGNAGAGSGGPGSAPTGHSPGGAAGYG
Sbjct: 301 GPQGGPRSSWSTQAPSGYGAMGYGNAAPWGGAPGGNAGAGSGGPGSAPTGHSPGGAAGYG 360

Query: 361 NQGYGYGGFGNQGYGYGGGDGSYGSQSGYGTGGGRSGSASNSNVGGGPSGGELQGNSGGY 420
           NQGYGYGG GNQGYGYGGGDGSYGSQSGYG GGGRSGSASNSNVGG PSGGELQGNSGGY
Sbjct: 361 NQGYGYGGLGNQGYGYGGGDGSYGSQSGYGAGGGRSGSASNSNVGGAPSGGELQGNSGGY 420

Query: 421 MNSGYGDANG-NTGYGNAGWRSDGGQVGYTGGYGGAQARHSQQQ 461
           M +GYGDANG NTGYGNA WRSDGGQVGYTGGY G QAR +QQQ
Sbjct: 421 MGNGYGDANGNNTGYGNAAWRSDGGQVGYTGGYAGGQARQAQQQ 460

[Close]

BLAST of CmoCh08G010370 vs. NCBI nr
Match: XP_022964215.1 (heterogeneous nuclear ribonucleoprotein 1-like [Cucurbita moschata])

HSP 1 Score: 865.5 bits (2235), Expect = 2.0e-247
Identity = 460/460 (100.00%), Postives = 460/460 (100.00%), Query Frame = 0


Query: 1   MDSDQGKLFIGGISWETSEDKLKDHFNSYGEVMHTVVMRDKITSKPRGFGFVVFADPSVL 60
           MDSDQGKLFIGGISWETSEDKLKDHFNSYGEVMHTVVMRDKITSKPRGFGFVVFADPSVL
Sbjct: 1   MDSDQGKLFIGGISWETSEDKLKDHFNSYGEVMHTVVMRDKITSKPRGFGFVVFADPSVL 60

Query: 61  DRVLQDKHTIDGKTVEAKRALSREEQQTPARAGNLNATRNSGGGNMRTKKIFVGGLPPTL 120
           DRVLQDKHTIDGKTVEAKRALSREEQQTPARAGNLNATRNSGGGNMRTKKIFVGGLPPTL
Sbjct: 61  DRVLQDKHTIDGKTVEAKRALSREEQQTPARAGNLNATRNSGGGNMRTKKIFVGGLPPTL 120

Query: 121 TEEGFKEYFETYGDVTDVVVMYDQNTRRPRGFGFISFDTEEAVDRVLHKTFHDLNGKQVE 180
           TEEGFKEYFETYGDVTDVVVMYDQNTRRPRGFGFISFDTEEAVDRVLHKTFHDLNGKQVE
Sbjct: 121 TEEGFKEYFETYGDVTDVVVMYDQNTRRPRGFGFISFDTEEAVDRVLHKTFHDLNGKQVE 180

Query: 181 VKRALPKDANPGAGGRSMGGSAGSGGYQTYGSSGGVNSNSYDSRMDSNRYMQSQGSSGGF 240
           VKRALPKDANPGAGGRSMGGSAGSGGYQTYGSSGGVNSNSYDSRMDSNRYMQSQGSSGGF
Sbjct: 181 VKRALPKDANPGAGGRSMGGSAGSGGYQTYGSSGGVNSNSYDSRMDSNRYMQSQGSSGGF 240

Query: 241 PPYGSSGYNNPGYGYGSSNNGMGYGGYGNYSGSNTGYGAPSAVAYGNPNVANAGYASGPQ 300
           PPYGSSGYNNPGYGYGSSNNGMGYGGYGNYSGSNTGYGAPSAVAYGNPNVANAGYASGPQ
Sbjct: 241 PPYGSSGYNNPGYGYGSSNNGMGYGGYGNYSGSNTGYGAPSAVAYGNPNVANAGYASGPQ 300

Query: 301 GGPRSSWSAQAPSGYGAMGYGNAAPWGGAPGGNAGAGSGGPGSAPTGHSPGGAAGYGNQG 360
           GGPRSSWSAQAPSGYGAMGYGNAAPWGGAPGGNAGAGSGGPGSAPTGHSPGGAAGYGNQG
Sbjct: 301 GGPRSSWSAQAPSGYGAMGYGNAAPWGGAPGGNAGAGSGGPGSAPTGHSPGGAAGYGNQG 360

Query: 361 YGYGGFGNQGYGYGGGDGSYGSQSGYGTGGGRSGSASNSNVGGGPSGGELQGNSGGYMNS 420
           YGYGGFGNQGYGYGGGDGSYGSQSGYGTGGGRSGSASNSNVGGGPSGGELQGNSGGYMNS
Sbjct: 361 YGYGGFGNQGYGYGGGDGSYGSQSGYGTGGGRSGSASNSNVGGGPSGGELQGNSGGYMNS 420

Query: 421 GYGDANGNTGYGNAGWRSDGGQVGYTGGYGGAQARHSQQQ 461
           GYGDANGNTGYGNAGWRSDGGQVGYTGGYGGAQARHSQQQ
Sbjct: 421 GYGDANGNTGYGNAGWRSDGGQVGYTGGYGGAQARHSQQQ 460

[Close]

BLAST of CmoCh08G010370 vs. NCBI nr
Match: KAG7026154.1 (Heterogeneous nuclear ribonucleoprotein 1 [Cucurbita argyrosperma subsp. argyrosperma])

HSP 1 Score: 862.4 bits (2227), Expect = 1.7e-246
Identity = 459/460 (99.78%), Postives = 459/460 (99.78%), Query Frame = 0


Query: 1   MDSDQGKLFIGGISWETSEDKLKDHFNSYGEVMHTVVMRDKITSKPRGFGFVVFADPSVL 60
           MDSDQGKLFIGGISWETSEDKLKDHFNSYGEVMHTVVMRDKITSKPRGFGFVVFADPSVL
Sbjct: 1   MDSDQGKLFIGGISWETSEDKLKDHFNSYGEVMHTVVMRDKITSKPRGFGFVVFADPSVL 60

Query: 61  DRVLQDKHTIDGKTVEAKRALSREEQQTPARAGNLNATRNSGGGNMRTKKIFVGGLPPTL 120
           DRVLQDKHTIDGKTVEAKRALSREEQQTPARAGNLNATRNSGGGNMRTKKIFVGGLPPTL
Sbjct: 61  DRVLQDKHTIDGKTVEAKRALSREEQQTPARAGNLNATRNSGGGNMRTKKIFVGGLPPTL 120

Query: 121 TEEGFKEYFETYGDVTDVVVMYDQNTRRPRGFGFISFDTEEAVDRVLHKTFHDLNGKQVE 180
           TEEGFKEYFETYGDVTDVVVMYDQNTRRPRGFGFISFDTEEAVDRVLHKTFHDLNGKQVE
Sbjct: 121 TEEGFKEYFETYGDVTDVVVMYDQNTRRPRGFGFISFDTEEAVDRVLHKTFHDLNGKQVE 180

Query: 181 VKRALPKDANPGAGGRSMGGSAGSGGYQTYGSSGGVNSNSYDSRMDSNRYMQSQGSSGGF 240
           VKRALPKDANPGAGGRSMGGSAGSGGYQTYGSSGGVNSNSYDSRMDSNRYMQSQGSSGGF
Sbjct: 181 VKRALPKDANPGAGGRSMGGSAGSGGYQTYGSSGGVNSNSYDSRMDSNRYMQSQGSSGGF 240

Query: 241 PPYGSSGYNNPGYGYGSSNNGMGYGGYGNYSGSNTGYGAPSAVAYGNPNVANAGYASGPQ 300
           PPYGSSGYNNPGYGYGSSNNGMGYGGYGNYSGSNTGYGAPSAVAYGNPNVANAGYASGPQ
Sbjct: 241 PPYGSSGYNNPGYGYGSSNNGMGYGGYGNYSGSNTGYGAPSAVAYGNPNVANAGYASGPQ 300

Query: 301 GGPRSSWSAQAPSGYGAMGYGNAAPWGGAPGGNAGAGSGGPGSAPTGHSPGGAAGYGNQG 360
           GGPRSSWSAQAPSGYGAMGYGNAAPWGGAPGGNAGAGSGGPGSAPTGHSPGGAAGYGNQG
Sbjct: 301 GGPRSSWSAQAPSGYGAMGYGNAAPWGGAPGGNAGAGSGGPGSAPTGHSPGGAAGYGNQG 360

Query: 361 YGYGGFGNQGYGYGGGDGSYGSQSGYGTGGGRSGSASNSNVGGGPSGGELQGNSGGYMNS 420
           YGYGGFGNQGYGYGGGDGSYGSQSGYGTGGGRSGSASNSNVGGGPSGGELQGNSGGYMNS
Sbjct: 361 YGYGGFGNQGYGYGGGDGSYGSQSGYGTGGGRSGSASNSNVGGGPSGGELQGNSGGYMNS 420

Query: 421 GYGDANGNTGYGNAGWRSDGGQVGYTGGYGGAQARHSQQQ 461
           GYGDANGNTGYGNAGWRSDGGQVGYTGGYGGAQAR SQQQ
Sbjct: 421 GYGDANGNTGYGNAGWRSDGGQVGYTGGYGGAQARQSQQQ 460

[Close]

BLAST of CmoCh08G010370 vs. NCBI nr
Match: XP_023514049.1 (heterogeneous nuclear ribonucleoprotein 1-like [Cucurbita pepo subsp. pepo])

HSP 1 Score: 860.1 bits (2221), Expect = 8.5e-246
Identity = 458/460 (99.57%), Postives = 458/460 (99.57%), Query Frame = 0


Query: 1   MDSDQGKLFIGGISWETSEDKLKDHFNSYGEVMHTVVMRDKITSKPRGFGFVVFADPSVL 60
           MDSDQGKLFIGGISWETSEDKLKDHFNSYGEVMHTVVMRDKITSKPRGFGFVVFADPSVL
Sbjct: 1   MDSDQGKLFIGGISWETSEDKLKDHFNSYGEVMHTVVMRDKITSKPRGFGFVVFADPSVL 60

Query: 61  DRVLQDKHTIDGKTVEAKRALSREEQQTPARAGNLNATRNSGGGNMRTKKIFVGGLPPTL 120
           DRVLQDKHTIDGKTVEAKRALSREEQQTPARAGNLNATRNSGGGNMRTKKIFVGGLPPTL
Sbjct: 61  DRVLQDKHTIDGKTVEAKRALSREEQQTPARAGNLNATRNSGGGNMRTKKIFVGGLPPTL 120

Query: 121 TEEGFKEYFETYGDVTDVVVMYDQNTRRPRGFGFISFDTEEAVDRVLHKTFHDLNGKQVE 180
           TEEGFKEYFETYGDVTDVVVMYDQNTRRPRGFGFISFDTEEAVDRVLHKTFHDLNGKQVE
Sbjct: 121 TEEGFKEYFETYGDVTDVVVMYDQNTRRPRGFGFISFDTEEAVDRVLHKTFHDLNGKQVE 180

Query: 181 VKRALPKDANPGAGGRSMGGSAGSGGYQTYGSSGGVNSNSYDSRMDSNRYMQSQGSSGGF 240
           VKRALPKDANPGAGGRSMGGSAGSGGYQTYGSSGGVNSNSYDSRMDSNRYMQSQGSSGGF
Sbjct: 181 VKRALPKDANPGAGGRSMGGSAGSGGYQTYGSSGGVNSNSYDSRMDSNRYMQSQGSSGGF 240

Query: 241 PPYGSSGYNNPGYGYGSSNNGMGYGGYGNYSGSNTGYGAPSAVAYGNPNVANAGYASGPQ 300
           PPYGSSGYNNPGYGYGSSNNGMGYGGYGNYSGSNTGYGAPSAVAYGNPNVANAGYASGPQ
Sbjct: 241 PPYGSSGYNNPGYGYGSSNNGMGYGGYGNYSGSNTGYGAPSAVAYGNPNVANAGYASGPQ 300

Query: 301 GGPRSSWSAQAPSGYGAMGYGNAAPWGGAPGGNAGAGSGGPGSAPTGHSPGGAAGYGNQG 360
           GGPRSSWSAQAPSGYGAMGYGNAAPWGGAPGGNAGAGSGGPGSAPTGHSPGGAAGYGNQG
Sbjct: 301 GGPRSSWSAQAPSGYGAMGYGNAAPWGGAPGGNAGAGSGGPGSAPTGHSPGGAAGYGNQG 360

Query: 361 YGYGGFGNQGYGYGGGDGSYGSQSGYGTGGGRSGSASNSNVGGGPSGGELQGNSGGYMNS 420
           YGYGGFGNQGYGYG GDGSYGSQSGYGTGGGRSGSASNSNVGGGPSGGELQGNSGGYMNS
Sbjct: 361 YGYGGFGNQGYGYGAGDGSYGSQSGYGTGGGRSGSASNSNVGGGPSGGELQGNSGGYMNS 420

Query: 421 GYGDANGNTGYGNAGWRSDGGQVGYTGGYGGAQARHSQQQ 461
           GYGDANGNTGYGNAGWRSDGGQVGYTGGYGGAQAR SQQQ
Sbjct: 421 GYGDANGNTGYGNAGWRSDGGQVGYTGGYGGAQARQSQQQ 460

[Close]

BLAST of CmoCh08G010370 vs. NCBI nr
Match: XP_023000503.1 (heterogeneous nuclear ribonucleoprotein 1-like [Cucurbita maxima])

HSP 1 Score: 858.6 bits (2217), Expect = 2.5e-245
Identity = 457/460 (99.35%), Postives = 457/460 (99.35%), Query Frame = 0


Query: 1   MDSDQGKLFIGGISWETSEDKLKDHFNSYGEVMHTVVMRDKITSKPRGFGFVVFADPSVL 60
           MDSDQGKLFIGGISWETSEDKLKDHFNSYGEVMHTVVMRDKITSKPRGFGFVVFADPSVL
Sbjct: 1   MDSDQGKLFIGGISWETSEDKLKDHFNSYGEVMHTVVMRDKITSKPRGFGFVVFADPSVL 60

Query: 61  DRVLQDKHTIDGKTVEAKRALSREEQQTPARAGNLNATRNSGGGNMRTKKIFVGGLPPTL 120
           DRVLQDKHTIDGKTVEAKRALSREEQQTPARAGNLNATRNSGGGNMRTKKIFVGGLPPTL
Sbjct: 61  DRVLQDKHTIDGKTVEAKRALSREEQQTPARAGNLNATRNSGGGNMRTKKIFVGGLPPTL 120

Query: 121 TEEGFKEYFETYGDVTDVVVMYDQNTRRPRGFGFISFDTEEAVDRVLHKTFHDLNGKQVE 180
           TEEGFKEYFETYGDVTDVVVMYDQNTRRPRGFGFISFDTEEAVDRVLHKTFHDLNGKQVE
Sbjct: 121 TEEGFKEYFETYGDVTDVVVMYDQNTRRPRGFGFISFDTEEAVDRVLHKTFHDLNGKQVE 180

Query: 181 VKRALPKDANPGAGGRSMGGSAGSGGYQTYGSSGGVNSNSYDSRMDSNRYMQSQGSSGGF 240
           VKRALPKDANPGAGGRSMGGSA SGGYQTYGSSGGVNSNSYDSRMDSNRYMQSQGSSGGF
Sbjct: 181 VKRALPKDANPGAGGRSMGGSASSGGYQTYGSSGGVNSNSYDSRMDSNRYMQSQGSSGGF 240

Query: 241 PPYGSSGYNNPGYGYGSSNNGMGYGGYGNYSGSNTGYGAPSAVAYGNPNVANAGYASGPQ 300
           PPYGSSGYNNPGYGYGSSNNGMGYGGYGNYSGSNTGYGAPSAVAYGNPNVANAGYASGPQ
Sbjct: 241 PPYGSSGYNNPGYGYGSSNNGMGYGGYGNYSGSNTGYGAPSAVAYGNPNVANAGYASGPQ 300

Query: 301 GGPRSSWSAQAPSGYGAMGYGNAAPWGGAPGGNAGAGSGGPGSAPTGHSPGGAAGYGNQG 360
           GGPRSSWSAQAPSGYGAMGYGNAAPWGGAPGGNAGAGSGGPGSAPTGHSPGGAAGYGNQG
Sbjct: 301 GGPRSSWSAQAPSGYGAMGYGNAAPWGGAPGGNAGAGSGGPGSAPTGHSPGGAAGYGNQG 360

Query: 361 YGYGGFGNQGYGYGGGDGSYGSQSGYGTGGGRSGSASNSNVGGGPSGGELQGNSGGYMNS 420
           YGYGGFGNQGYGYGGGDGSYGSQSGYGTGGGRSGSASNSNVGGGPSGGELQGNSGGYMNS
Sbjct: 361 YGYGGFGNQGYGYGGGDGSYGSQSGYGTGGGRSGSASNSNVGGGPSGGELQGNSGGYMNS 420

Query: 421 GYGDANGNTGYGNAGWRSDGGQVGYTGGYGGAQARHSQQQ 461
           GYGDANGNTGYGNAGWRSDGGQVGYTGGYGG QAR SQQQ
Sbjct: 421 GYGDANGNTGYGNAGWRSDGGQVGYTGGYGGGQARQSQQQ 460

[Close]

BLAST of CmoCh08G010370 vs. NCBI nr
Match: KAG6593820.1 (Heterogeneous nuclear ribonucleoprotein 1, partial [Cucurbita argyrosperma subsp. sororia])

HSP 1 Score: 832.4 bits (2149), Expect = 1.9e-237
Identity = 442/442 (100.00%), Postives = 442/442 (100.00%), Query Frame = 0


Query: 1   MDSDQGKLFIGGISWETSEDKLKDHFNSYGEVMHTVVMRDKITSKPRGFGFVVFADPSVL 60
           MDSDQGKLFIGGISWETSEDKLKDHFNSYGEVMHTVVMRDKITSKPRGFGFVVFADPSVL
Sbjct: 113 MDSDQGKLFIGGISWETSEDKLKDHFNSYGEVMHTVVMRDKITSKPRGFGFVVFADPSVL 172

Query: 61  DRVLQDKHTIDGKTVEAKRALSREEQQTPARAGNLNATRNSGGGNMRTKKIFVGGLPPTL 120
           DRVLQDKHTIDGKTVEAKRALSREEQQTPARAGNLNATRNSGGGNMRTKKIFVGGLPPTL
Sbjct: 173 DRVLQDKHTIDGKTVEAKRALSREEQQTPARAGNLNATRNSGGGNMRTKKIFVGGLPPTL 232

Query: 121 TEEGFKEYFETYGDVTDVVVMYDQNTRRPRGFGFISFDTEEAVDRVLHKTFHDLNGKQVE 180
           TEEGFKEYFETYGDVTDVVVMYDQNTRRPRGFGFISFDTEEAVDRVLHKTFHDLNGKQVE
Sbjct: 233 TEEGFKEYFETYGDVTDVVVMYDQNTRRPRGFGFISFDTEEAVDRVLHKTFHDLNGKQVE 292

Query: 181 VKRALPKDANPGAGGRSMGGSAGSGGYQTYGSSGGVNSNSYDSRMDSNRYMQSQGSSGGF 240
           VKRALPKDANPGAGGRSMGGSAGSGGYQTYGSSGGVNSNSYDSRMDSNRYMQSQGSSGGF
Sbjct: 293 VKRALPKDANPGAGGRSMGGSAGSGGYQTYGSSGGVNSNSYDSRMDSNRYMQSQGSSGGF 352

Query: 241 PPYGSSGYNNPGYGYGSSNNGMGYGGYGNYSGSNTGYGAPSAVAYGNPNVANAGYASGPQ 300
           PPYGSSGYNNPGYGYGSSNNGMGYGGYGNYSGSNTGYGAPSAVAYGNPNVANAGYASGPQ
Sbjct: 353 PPYGSSGYNNPGYGYGSSNNGMGYGGYGNYSGSNTGYGAPSAVAYGNPNVANAGYASGPQ 412

Query: 301 GGPRSSWSAQAPSGYGAMGYGNAAPWGGAPGGNAGAGSGGPGSAPTGHSPGGAAGYGNQG 360
           GGPRSSWSAQAPSGYGAMGYGNAAPWGGAPGGNAGAGSGGPGSAPTGHSPGGAAGYGNQG
Sbjct: 413 GGPRSSWSAQAPSGYGAMGYGNAAPWGGAPGGNAGAGSGGPGSAPTGHSPGGAAGYGNQG 472

Query: 361 YGYGGFGNQGYGYGGGDGSYGSQSGYGTGGGRSGSASNSNVGGGPSGGELQGNSGGYMNS 420
           YGYGGFGNQGYGYGGGDGSYGSQSGYGTGGGRSGSASNSNVGGGPSGGELQGNSGGYMNS
Sbjct: 473 YGYGGFGNQGYGYGGGDGSYGSQSGYGTGGGRSGSASNSNVGGGPSGGELQGNSGGYMNS 532

Query: 421 GYGDANGNTGYGNAGWRSDGGQ 443
           GYGDANGNTGYGNAGWRSDGGQ
Sbjct: 533 GYGDANGNTGYGNAGWRSDGGQ 554

[Close]

BLAST of CmoCh08G010370 vs. TAIR 10
Match: AT4G14300.1 (RNA-binding (RRM/RBD/RNP motifs) family protein )

HSP 1 Score: 445.7 bits (1145), Expect = 4.6e-125
Identity = 270/459 (58.82%), Postives = 313/459 (68.19%), Query Frame = 0


Query: 1   MDSDQGKLFIGGISWETSEDKLKDHFNSYGEVMHTVVMRDKITSKPRGFGFVVFADPSVL 60
           MDSDQGKLF+GGISWET EDKL++HF +YGEV   +VMRDK+T +PRGFGFV+F+DPSVL
Sbjct: 1   MDSDQGKLFVGGISWETDEDKLREHFTNYGEVSQAIVMRDKLTGRPRGFGFVIFSDPSVL 60

Query: 61  DRVLQDKHTIDGKTVEAKRALSREEQQTPARAGNLNATRNSGG-GNMRTKKIFVGGLPPT 120
           DRVLQ+KH+ID + V+ KRA+SREEQQ   R GNLN +R+SGG    +TKKIFVGGLPPT
Sbjct: 61  DRVLQEKHSIDTREVDVKRAMSREEQQVSGRTGNLNTSRSSGGDAYNKTKKIFVGGLPPT 120

Query: 121 LTEEGFKEYFETYGDVTDVVVMYDQNTRRPRGFGFISFDTEEAVDRVLHKTFHDLNGKQV 180
           LT+E F++YFE YG VTDV +MYDQ T RPRGFGF+SFD+E+AVD VLHKTFHDL+GKQV
Sbjct: 121 LTDEEFRQYFEVYGPVTDVAIMYDQATNRPRGFGFVSFDSEDAVDSVLHKTFHDLSGKQV 180

Query: 181 EVKRALPKDANPGAGGRSMGGSAGSGGYQTYGSSGGVNSNSYDSRMDSNRYMQSQGSSGG 240
           EVKRALPKDANPG GGRSMGG  GSGGYQ YG     N +SYD RMDSNR++Q Q    G
Sbjct: 181 EVKRALPKDANPGGGGRSMGG-GGSGGYQGYGG----NESSYDGRMDSNRFLQHQSVGNG 240

Query: 241 FPPYGSSGYNNPGYGYGSSNNGMGYGGYGNYSGSNTGYGAPSAVAYGNPNVANAGYASGP 300
            P YGSSGY   G GYG+ +NG GYG YG Y+GS  GYGA +   YG  N+  AGY S  
Sbjct: 241 LPSYGSSGY---GAGYGNGSNGAGYGAYGGYTGSAGGYGAGATAGYGATNIPGAGYGSST 300

Query: 301 QGGPRSSWSAQAPSGYGAMGYGNAAPWGGAPGGNAGAGSGGPGSAPTGHSPGGAAGYGNQ 360
              PR+SW   A SGYG  GYG+         G A +G G PG+AP   SP   +GY NQ
Sbjct: 301 GVAPRNSWDTPASSGYGNPGYGS---------GAAHSGYGVPGAAPPTQSP---SGYSNQ 360

Query: 361 GYGYGGFGNQGYGYGGGDGSYGSQSGYGTGGGRSGSASNSNVGGGPSGGELQGNSGGYMN 420
           GYGYG       GY G D  YG+Q+ YG  GGR     ++N G           SGGYM 
Sbjct: 361 GYGYG-------GYSGSDSGYGNQAAYGVVGGRPSGGGSNNPG-----------SGGYMG 411

Query: 421 SGYGDANGNTGYGNAGWRSDGGQVGYTGGYGGAQARHSQ 459
            GYGD +         WRSD  Q GY GGY   Q R  Q
Sbjct: 421 GGYGDGS---------WRSDPSQ-GYGGGYNDGQGRQGQ 411

[Close]

BLAST of CmoCh08G010370 vs. TAIR 10
Match: AT2G33410.1 (RNA-binding (RRM/RBD/RNP motifs) family protein )

HSP 1 Score: 430.6 bits (1106), Expect = 1.5e-120
Identity = 265/462 (57.36%), Postives = 320/462 (69.26%), Query Frame = 0


Query: 1   MDSDQGKLFIGGISWETSEDKLKDHFNSYGEVMHTVVMRDKITSKPRGFGFVVFADPSVL 60
           M+SDQGKLFIGGISW+T E+ L+++F+++GEV+   VMR+K T +PRGFGFV F+DP+V+
Sbjct: 1   MESDQGKLFIGGISWDTDENLLREYFSNFGEVLQVTVMREKATGRPRGFGFVAFSDPAVI 60

Query: 61  DRVLQDKHTIDGKTVEAKRALSREEQQTPARAGNLNATRN-SGGGNMRTKKIFVGGLPPT 120
           DRVLQDKH ID + V+ KRA+SREEQ    R+G  NA+RN   G N+RTKKIFVGGLPP 
Sbjct: 61  DRVLQDKHHIDNRDVDVKRAMSREEQSPAGRSGTFNASRNFDSGANVRTKKIFVGGLPPA 120

Query: 121 LTEEGFKEYFETYGDVTDVVVMYDQNTRRPRGFGFISFDTEEAVDRVLHKTFHDLNGKQV 180
           LT + F+ YFETYG V+D V+M DQ T+RPRGFGF+SFD+E++VD VLHKTFHDLNGKQV
Sbjct: 121 LTSDEFRAYFETYGPVSDAVIMIDQTTQRPRGFGFVSFDSEDSVDLVLHKTFHDLNGKQV 180

Query: 181 EVKRALPKDANPGAGGRSMGGSAGSGGYQTYGSSGGVNSNSYDSRMDSNRYMQSQGSSGG 240
           EVKRALPKDANPG       GS G+GG+  YG SGG   + Y+ R+DSNRYMQ Q +  G
Sbjct: 181 EVKRALPKDANPGIASGGGRGSGGAGGFPGYGGSGG---SGYEGRVDSNRYMQPQNTGSG 240

Query: 241 FPPYGSSGYNNPGYGYGSSNNGMGYGGYGNYSGSNTGYGAPSAVAYGNPNVANAGYASGP 300
           +PPYG SGY   GYGYGS  NG+GYGG+G       GYG P+   YGNP+V  AG+ S  
Sbjct: 241 YPPYGGSGYGT-GYGYGS--NGVGYGGFG-------GYGNPAGAPYGNPSVPGAGFGS-- 300

Query: 301 QGGPRSSWSAQAPSGYGAMGYGNAAPWGGAPGGNAGAGSGGPGSAPTGHSPGGAAGYGNQ 360
             GPRSSW AQAPSGYG +GYGNAAPWG         GSGGPGSA  G + G +AGY   
Sbjct: 301 --GPRSSWGAQAPSGYGNVGYGNAAPWG---------GSGGPGSAVMGQA-GASAGY--- 360

Query: 361 GYGYGGFGNQGYGYGGGDGSYGSQSGYGTGGGRSGSASNSNVGGGPSGGELQGNSGGYMN 420
                  G+QGYGYGG D SYG+ S YG  GGRSG+  N++ GG                
Sbjct: 361 -------GSQGYGYGGNDSSYGTPSAYGAVGGRSGNMPNNHGGG---------------- 404

Query: 421 SGYGDA-NGNTGYGNAGWRSDGGQVGYTGGYGGAQARHSQQQ 461
            GY DA +G+ GYGN   + + GQ GY GGYG    R +QQQ
Sbjct: 421 -GYADALDGSGGYGN--HQGNNGQAGYGGGYG--SGRQAQQQ 404

[Close]

BLAST of CmoCh08G010370 vs. TAIR 10
Match: AT3G07810.1 (RNA-binding (RRM/RBD/RNP motifs) family protein )

HSP 1 Score: 207.6 bits (527), Expect = 2.1e-53
Identity = 194/486 (39.92%), Postives = 265/486 (54.53%), Query Frame = 0


Query: 1   MDSDQGKLFIGGISWETSEDKLKDHFNSYGEVMHTVVMRDKITSKPRGFGFVVFADPSVL 60
           M SD GKLFIGGISW+T+E++LK++F+S+GEV+  V+++D+ T + RGFGFVVFADP+V 
Sbjct: 1   MQSDNGKLFIGGISWDTNEERLKEYFSSFGEVIEAVILKDRTTGRARGFGFVVFADPAVA 60

Query: 61  DRVLQDKHTIDGKTVEAKRALSREEQQTPARAGNLNATRNSGGGNMRTKKIFVGGLPPTL 120
           + V+ +KH IDG+ VEAK+A+ R++Q    R+ N ++ + S GG  RT+KIFVGGLP ++
Sbjct: 61  EIVITEKHNIDGRLVEAKKAVPRDDQNMVNRS-NSSSIQGSPGGPGRTRKIFVGGLPSSV 120

Query: 121 TEEGFKEYFETYGDVTDVVVMYDQNTRRPRGFGFISFDTEEAVDRVLHKTFHDLNGKQVE 180
           TE  FK YFE +G  TDVVVMYD NT+RPRGFGFI++D+EEAV++VL KTFH+LNGK VE
Sbjct: 121 TESDFKTYFEQFGTTTDVVVMYDHNTQRPRGFGFITYDSEEAVEKVLLKTFHELNGKMVE 180

Query: 181 VKRALPKDANPGAGGRSMGGSAGSGGYQT----YGSSGGVNS---NSYDSRMDSNRYMQS 240
           VKRA+PK+ +PG     +G     G  +      G + G N      Y  RMD       
Sbjct: 181 VKRAVPKELSPGPSRSPLGAGYSYGVNRVNNLLNGYAQGFNPAAVGGYGLRMD------- 240

Query: 241 QGSSGGFPPYGS--SGYNNPGYGYGSSNN-----GMGYGGYGNYSGSNTGYGAPSAVAY- 300
               G F P G+  SG+ N   GYG + N       G+ G  NY+G N  YG   +  Y 
Sbjct: 241 ----GRFSPVGAGRSGFANYSSGYGMNVNFDQGLPTGFTGGTNYNG-NVDYGRGMSPYYI 300

Query: 301 GNPNVAN--AGYASGPQGGPRSSWSAQAPSGYGAMG-----------YGNAAPWGGAPGG 360
           GN N      GY  G  GG  S +S+   + +G  G             N    G + G 
Sbjct: 301 GNTNRFGPAVGYEGGNGGGNSSFFSSVTRNLWGNNGGLNYNNNNTNSNSNTYMGGSSSGN 360

Query: 361 NAGAGSGGPGSAPTGHSPGGAAGYGNQG--YGYGGFGNQGYGYGGGDGSYGSQSGYGTGG 420
           N  +G  G      G   GG     N+   +GYGG G  G+G   G G Y +++      
Sbjct: 361 NTLSGPFGNSGVNWGAPGGGNNAVSNENVKFGYGGNGESGFGL--GTGGYAARNPGANKA 420

Query: 421 GRSGSASNSNVGGGPSGGELQGNSGGYMNSGYGDANGNTG-YGNAGWRS----DGGQVGY 452
             S S S+++            N+ GY  +G  +  GN   Y +  WRS      G   +
Sbjct: 421 APSSSFSSASA----------TNNTGYDTAGLAEFYGNGAVYSDPTWRSPTPETEGPAPF 461

[Close]

BLAST of CmoCh08G010370 vs. TAIR 10
Match: AT3G07810.2 (RNA-binding (RRM/RBD/RNP motifs) family protein )

HSP 1 Score: 207.6 bits (527), Expect = 2.1e-53
Identity = 194/486 (39.92%), Postives = 265/486 (54.53%), Query Frame = 0


Query: 1   MDSDQGKLFIGGISWETSEDKLKDHFNSYGEVMHTVVMRDKITSKPRGFGFVVFADPSVL 60
           M SD GKLFIGGISW+T+E++LK++F+S+GEV+  V+++D+ T + RGFGFVVFADP+V 
Sbjct: 1   MQSDNGKLFIGGISWDTNEERLKEYFSSFGEVIEAVILKDRTTGRARGFGFVVFADPAVA 60

Query: 61  DRVLQDKHTIDGKTVEAKRALSREEQQTPARAGNLNATRNSGGGNMRTKKIFVGGLPPTL 120
           + V+ +KH IDG+ VEAK+A+ R++Q    R+ N ++ + S GG  RT+KIFVGGLP ++
Sbjct: 61  EIVITEKHNIDGRLVEAKKAVPRDDQNMVNRS-NSSSIQGSPGGPGRTRKIFVGGLPSSV 120

Query: 121 TEEGFKEYFETYGDVTDVVVMYDQNTRRPRGFGFISFDTEEAVDRVLHKTFHDLNGKQVE 180
           TE  FK YFE +G  TDVVVMYD NT+RPRGFGFI++D+EEAV++VL KTFH+LNGK VE
Sbjct: 121 TESDFKTYFEQFGTTTDVVVMYDHNTQRPRGFGFITYDSEEAVEKVLLKTFHELNGKMVE 180

Query: 181 VKRALPKDANPGAGGRSMGGSAGSGGYQT----YGSSGGVNS---NSYDSRMDSNRYMQS 240
           VKRA+PK+ +PG     +G     G  +      G + G N      Y  RMD       
Sbjct: 181 VKRAVPKELSPGPSRSPLGAGYSYGVNRVNNLLNGYAQGFNPAAVGGYGLRMD------- 240

Query: 241 QGSSGGFPPYGS--SGYNNPGYGYGSSNN-----GMGYGGYGNYSGSNTGYGAPSAVAY- 300
               G F P G+  SG+ N   GYG + N       G+ G  NY+G N  YG   +  Y 
Sbjct: 241 ----GRFSPVGAGRSGFANYSSGYGMNVNFDQGLPTGFTGGTNYNG-NVDYGRGMSPYYI 300

Query: 301 GNPNVAN--AGYASGPQGGPRSSWSAQAPSGYGAMG-----------YGNAAPWGGAPGG 360
           GN N      GY  G  GG  S +S+   + +G  G             N    G + G 
Sbjct: 301 GNTNRFGPAVGYEGGNGGGNSSFFSSVTRNLWGNNGGLNYNNNNTNSNSNTYMGGSSSGN 360

Query: 361 NAGAGSGGPGSAPTGHSPGGAAGYGNQG--YGYGGFGNQGYGYGGGDGSYGSQSGYGTGG 420
           N  +G  G      G   GG     N+   +GYGG G  G+G   G G Y +++      
Sbjct: 361 NTLSGPFGNSGVNWGAPGGGNNAVSNENVKFGYGGNGESGFGL--GTGGYAARNPGANKA 420

Query: 421 GRSGSASNSNVGGGPSGGELQGNSGGYMNSGYGDANGNTG-YGNAGWRS----DGGQVGY 452
             S S S+++            N+ GY  +G  +  GN   Y +  WRS      G   +
Sbjct: 421 APSSSFSSASA----------TNNTGYDTAGLAEFYGNGAVYSDPTWRSPTPETEGPAPF 461

[Close]

BLAST of CmoCh08G010370 vs. TAIR 10
Match: AT4G26650.1 (RNA-binding (RRM/RBD/RNP motifs) family protein )

HSP 1 Score: 188.7 bits (478), Expect = 1.0e-47
Identity = 186/458 (40.61%), Postives = 247/458 (53.93%), Query Frame = 0


Query: 3   SDQGKLFIGGISWETSEDKLKDHFNSYGEVMHTVVMRDKITSKPRGFGFVVFADPSVLDR 62
           SD GKLFIGGISW+T E++L+++F  YG+++  V+MRD+ T + RGFGF+VFADPSV +R
Sbjct: 12  SDLGKLFIGGISWDTDEERLQEYFGKYGDLVEAVIMRDRTTGRARGFGFIVFADPSVAER 71

Query: 63  VLQDKHTIDGKTVEAKRALSREEQQTPARAGN----LNATRNSGGGNMRTKKIFVGGLPP 122
           V+ DKH IDG+TVEAK+A+ R++QQ   R  +    ++ +    GG  RTKKIFVGGLP 
Sbjct: 72  VIMDKHIIDGRTVEAKKAVPRDDQQVLKRHASPMHLISPSHGGNGGGARTKKIFVGGLPS 131

Query: 123 TLTEEGFKEYFETYGDVTDVVVMYDQNTRRPRGFGFISFDTEEAVDRVLHKTFHDLNGKQ 182
           ++TE  FK YF+ +G + DVVVMYD NT+RPRGFGFI+FD+EE+VD VLHKTFH+LNGK 
Sbjct: 132 SITEAEFKNYFDQFGTIADVVVMYDHNTQRPRGFGFITFDSEESVDMVLHKTFHELNGKM 191

Query: 183 VEVKRALPKDANPGAGGRS-MGGSAGSGGYQTYGSSGGVNSNSYDSRMDSNRYMQSQGSS 242
           VEVKRA+PK+ +     RS + G   + G     SS     NS+    ++N    + GS+
Sbjct: 192 VEVKRAVPKELSSTTPNRSPLIGYGNNYGVVPNRSSANSYFNSFPPGYNNN----NLGSA 251

Query: 243 GGFPPYGSSGYNNPGYGYGSSNNGMGYGGYGNYSGSNTGYGAPSAVAYGNPNVANAGYAS 302
           G F P GS       +G G +          N+ G+  GY       Y N   A+    +
Sbjct: 252 GRFSPIGSGRNAFSSFGLGLNQE---LNLNSNFDGNTLGYSRIPGNQYFNS--ASPNRYN 311

Query: 303 GPQGGPRSSWSAQAPSGYGAMGYGNAAPWGGAPGGNAGAGSGGPGSAPTGHSPGGAAGYG 362
            P G  R   SA  PS      +GN +   G PG N G   G       G+    +    
Sbjct: 312 SPIGYNRGD-SAYNPSNRDL--WGNRSDSSG-PGWNLGVSVGN----NRGNWGLSSVVSD 371

Query: 363 NQGYG--YG-GFGNQGYGYGGGDGSYGSQSG--YGTGGGRSGSASNSNVGGGPSGGELQG 422
           N GYG  YG G G  G  + G    +    G  Y      S S    ++    S  EL G
Sbjct: 372 NNGYGRSYGAGSGLSGLSFAGNTNGFDGSIGELYRGSSVYSDSTWQQSMPHHQSSNELDG 431

Query: 423 NSGGYMNSGYG-DANGNTGYGNAGWRSDGGQVGYTGGY 450
            S  Y   G+G D  G+    NA         GY+G Y
Sbjct: 432 LSRSY---GFGIDNVGSDPSANA-------SEGYSGNY 442

The following BLAST results are available for this feature:

BLAST of CmoCh08G010370 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
Q8W034	6.5e-124	58.82	Heterogeneous nuclear ribonucleoprotein 1 OS=Arabidopsis thaliana OX=3702 GN=RNP...	[more]
P51990	1.1e-38	35.18	Heterogeneous nuclear ribonucleoprotein A2 homolog 2 OS=Xenopus laevis OX=8355 P...	[more]
P51989	1.6e-37	35.96	Heterogeneous nuclear ribonucleoprotein A2 homolog 1 OS=Xenopus laevis OX=8355 P...	[more]
Q8BG05	6.9e-33	34.30	Heterogeneous nuclear ribonucleoprotein A3 OS=Mus musculus OX=10090 GN=Hnrnpa3 P...	[more]
Q6URK4	6.9e-33	34.30	Heterogeneous nuclear ribonucleoprotein A3 OS=Rattus norvegicus OX=10116 GN=Hnrn...	[more]

BLAST of CmoCh08G010370 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A6J1HK79	9.8e-248	100.00	heterogeneous nuclear ribonucleoprotein 1-like OS=Cucurbita moschata OX=3662 GN=...	[more]
A0A6J1KMT7	1.2e-245	99.35	heterogeneous nuclear ribonucleoprotein 1-like OS=Cucurbita maxima OX=3661 GN=LO...	[more]
A0A6J1CDB1	1.5e-227	91.59	heterogeneous nuclear ribonucleoprotein 1-like OS=Momordica charantia OX=3673 GN...	[more]
A0A6J1H3Z2	2.8e-226	92.26	heterogeneous nuclear ribonucleoprotein 1-like OS=Cucurbita moschata OX=3662 GN=...	[more]
A0A6J1KWS0	4.4e-224	91.81	heterogeneous nuclear ribonucleoprotein 1-like OS=Cucurbita maxima OX=3661 GN=LO...	[more]

BLAST of CmoCh08G010370 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_022964215.1	2.0e-247	100.00	heterogeneous nuclear ribonucleoprotein 1-like [Cucurbita moschata]	[more]
KAG7026154.1	1.7e-246	99.78	Heterogeneous nuclear ribonucleoprotein 1 [Cucurbita argyrosperma subsp. argyros...	[more]
XP_023514049.1	8.5e-246	99.57	heterogeneous nuclear ribonucleoprotein 1-like [Cucurbita pepo subsp. pepo]	[more]
XP_023000503.1	2.5e-245	99.35	heterogeneous nuclear ribonucleoprotein 1-like [Cucurbita maxima]	[more]
KAG6593820.1	1.9e-237	100.00	Heterogeneous nuclear ribonucleoprotein 1, partial [Cucurbita argyrosperma subsp...	[more]

BLAST of CmoCh08G010370 vs. TAIR 10


Match Name	E-value	Identity	Description
AT4G14300.1	4.6e-125	58.82	RNA-binding (RRM/RBD/RNP motifs) family protein	[more]
AT2G33410.1	1.5e-120	57.36	RNA-binding (RRM/RBD/RNP motifs) family protein	[more]
AT3G07810.1	2.1e-53	39.92	RNA-binding (RRM/RBD/RNP motifs) family protein	[more]
AT3G07810.2	2.1e-53	39.92	RNA-binding (RRM/RBD/RNP motifs) family protein	[more]
AT4G26650.1	1.0e-47	40.61	RNA-binding (RRM/RBD/RNP motifs) family protein	[more]

InterPro

Analysis Name: InterPro Annotations of Cucurbita moschata (Rifu) v1
Date Performed: 2021-10-25


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR000504	RNA recognition motif domain	SMART	SM00360	rrm1_1	coord: 7..78 e-value: 1.5E-19 score: 81.0 coord: 110..182 e-value: 5.1E-25 score: 99.1
IPR000504	RNA recognition motif domain	PFAM	PF00076	RRM_1	coord: 111..169 e-value: 2.2E-16 score: 59.4 coord: 8..75 e-value: 1.7E-14 score: 53.4
IPR000504	RNA recognition motif domain	PROSITE	PS50102	RRM	coord: 6..82 score: 16.329578
IPR000504	RNA recognition motif domain	PROSITE	PS50102	RRM	coord: 109..186 score: 18.751446
IPR012677	Nucleotide-binding alpha-beta plait domain superfamily	GENE3D	3.30.70.330		coord: 86..204 e-value: 1.1E-26 score: 95.4
IPR012677	Nucleotide-binding alpha-beta plait domain superfamily	GENE3D	3.30.70.330		coord: 4..85 e-value: 1.2E-23 score: 85.2
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 381..435
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 183..243
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 87..105
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 202..243
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 79..109
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 377..460
None	No IPR available	PANTHER	PTHR48035	HETEROGENEOUS NUCLEAR RIBONUCLEOPROTEIN 1	coord: 1..458
None	No IPR available	PANTHER	PTHR48035:SF2	HETEROGENEOUS NUCLEAR RIBONUCLEOPROTEIN 1	coord: 1..458
None	No IPR available	CDD	cd12325	RRM1_hnRNPA_hnRNPD_like	coord: 8..78 e-value: 3.82961E-35 score: 123.465
IPR034131	DAZ-associated protein 1, RNA recognition motif 2	CDD	cd12327	RRM2_DAZAP1	coord: 107..186 e-value: 4.43718E-45 score: 149.823
IPR035979	RNA-binding domain superfamily	SUPERFAMILY	54928	RNA-binding domain, RBD	coord: 3..106
IPR035979	RNA-binding domain superfamily	SUPERFAMILY	54928	RNA-binding domain, RBD	coord: 108..215

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
CmoCh08G010370.1	CmoCh08G010370.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
molecular_function	GO:0003723	RNA binding
molecular_function	GO:0003676	nucleic acid binding