CmoCh08G010160 (gene) Cucurbita moschata (Rifu) v1
Overview
Sequences
The following sequences are available for this feature:
Legend: exonCDSpolypeptidethree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below.ATGAATTTTACTTACCCAAAGTCCAGAAATGCCAAAGAAGAAGAAGAACTCTTTAGGTAATTTTATCAAACCGCAAACTGAATTCTCTCCTTGAATATTTCTATATGCTAAATATTACCCATTGTAGGAAGCTGGAAACAGAGAAGCATCGAAGGGATCTATGGATGATTGGAAATGGATTGGGTTACCTTGAAAATCCAGACACTGTCGATCACATCATCCAAGACCCCAGAAGGTTCTTCATCGAACTCCGGCGCTGGCTCGTCGGACCACCAACGGCGGCGTGTCTTCCGGCTGGTTCCGAAGCGAATGCCGGGGTCGAAGCCTTGCTGGGCGGCTTCTTCGTCTTCATTTCTGCGTCTGAACTTCTGGGAACCGAAGGATTCGGCATTGGAGTCCCAAGGACGGTAGTGGGTTGTCGCAGAGGAGAAGCGAAAGCGAGAAGAATGATTGGGGAAAATGGATCGCCATGGATGAGTGAAGCTGAAGCTGGTGGGATGAAGAAGGAGGGCCTTCATTTCGCCACGTTATCCGTTTTGTAATTGCTTCCCTATCCTCCTCTCTTAAACCTCTCTCTCCTTCTATCTATGGCCCATAGTGGGTCGTGGAATGTTCTCTTTCTATAAAATTTTACATTTTTATTTAAAGATTTGATATTTAACCAAAGAACTGGGAGAGATTTTAAAAATTAAGGAACAAGAGAAAGGATTAAAAGATATATATATATATATATATATATGTATGTAAAAGGATCTATCCGATCATAGATGAGTTGTAGATAAACGTTTTCGATTGTATACTTAGAGTGAGAATTTTTTTAATTTTTTTCTAAAATTTAAGGGTATTAATATTAATATTAAAAATTTAACGATATTTTTTAAAGGTGATATTAAAGGTTAGTATAAATATTAGGGATAAGATTTTTTTTTTTTTTTTTACTTTTTAATAATTTAAGAATATTTTTTAAATAAAGGATTAATATGAATATATTTTTAATTATTACTATTTCTAAGTTTAATTTTGAAATCTCGTATGTATATATATATATATATATATATATTGATATTTTAGACGGTTAAAATATTATAGTAAAAATGGAGAATTTAAAACAAAGTTAATAATAATAATAATAATCATAAAGCTGGAAGCGTGATTGTGAGGGCTCGATATATCTATCCCTTTGCTTCTCCAGTTCGGCACAAAGACGAAGCAAGAAAAATAAGAGCGAAACAGAACTCAGAAATAAAAGTTGGGCGGCTCGAAGCGTGATTGTGAGGGCTCGATCAGGTAAGTATCTTGATTGATTACAATTTCTTTGCCTCTACATTTTCTTGTTTCTTGTGATTTGAAGCTGTTGTAATTCGCTTCGCCTCTCGATTTTCTTGTTTCTTGTGATTTGAAGCTGTTGTAATTCGCTTCGCCTCGTTCAAAATTCTACTCCGGTGAGTTGCTAATCAAAAGATGTCCATGTTTCATTAATGAAATCTTCTTTGATCTTGATCATTTTCCAGTCGTTCATTATATAGAAGCCTAAAAGAGATCGAATGATTGTTTCGCTTTTTATTTCGATTTTGTGAAGTTCCGAAGAAACATATTGGTTTTGTTATTGATTGATTGCAGCAGCGAGAGGAGAAATGAGGCCTACACCGATGGAGTTCTTTGCGGAGATGGAAGAACAGGGATCGACGGTAGCGATGGACGTGGATGATGTCGATCCACTTGAGATATTAGGCGAGGGAGTGATCTCAGCAGAGAACAAGCTCGCCGATGCCGATTTCTTCAACTCCTTCGAGGACGATTTTGATGACTCCGACATCAACTGAAACAAGATGATTGATGCTAGTATGTCCTACTGCTTTTTAGGGATTTCAGCACTTCTAGTTTCTTGGCGATAAATTGAAAATTGGAGACTGATTGCTTTTGAGTACTTGATTGGTTATGGCATATTTGCTTGCTTTTCCCTCAACCACAATAATCAACCGTGTAATCTTTGTCATTAGTTACAAGGAAAATTAAGGAGGTGTTTGTATGTAGTAGACAATTCCTGCAACTATGTGCTCCATTCTGATGTTTAGTAATCTATTTTGGACTTTGAGGAAGTCCATAGGTTAGCCTGAATATCCTTCGAGTATAACTGGCTTGGATAGGTTAGCCTGAATATCCTTCGAGTATAACTGGCTTGGATGTCAAAAACTTGCTGCTTGCTAGTAAGGAATAAGGATAAGCTCATCCCTATCTGTTATTCTTCATTTCTGTTAGTCTACATTTACTAGTGTAATGAATAGGCGAATCTCACTGTACTTTTATCTGATAAGAATCCCATTTGAAACGAAGAAGGGACTTTATTTAGGGGGAAAAAGCTATCTCTTTTTTGTGATATACGAAGAGAGTTTCACCATGGATTTAGAACGGCGCAATTGCGCCATTGTGTCATATTACAGTTGTCTTGTAAGCTATAGGTTTTCTCATGAAGGGTCAGCATACGGTTAATTCTTGAATGAGTTGTTCCTAAATATCCTCTGTGAAGTACATAGAATTTTTCTATACTCTTTGGAACTACCCCATTAGATACTGGCAATAGGTCTGCTTTGACCAACAACAATGTAGAAACCGAATTAGAATTGATGGTAGGTTTCATGTGTACCCCTCCTTTTTTCTCGAATGGAATCAAGTGGATAGAGTTGAAATAAGTTGTTATTAAGGGTTAAATCGTGGCGAATGAACTATACCCATGGTATCTCAAGCCAGCTTAATTTAAATCCTCCCTATGGGTAAGTTTTCCTTTATTTCTGTTTCTAGAGCCAAGAATCCAGCATTTGGATGTATGAGGTAGTGGAACTTGGAAAGTCCAATGTTTTAATTAAACCATTTGGTAGTTAGTTTTTTCTGAGTTCATTGTTGTAACCTCATGCCAATTACCACCTAGTGTTGGGGGTCAGCATGATTACCGAAGTTTTTGCATGCTAAAACAATGTGTCTTGGGGAAAGTTTTATTGAGTTCTTGTTGTAACATGATGCCATTTACCATATAGGTGGAGGTTTGACATGATAAGCAAATTCAGATGATCCGATGTCTCGATTTTTTGAGTAGGTGATAATCTAGAATAACGTTTAGATTAACACGAGTTCGCAGTTTTTGTCTACTAGGAGAAGGTTAAAACATCAATGCAGCTTTCTTGATGTAATTTTTGCAGTAGGCTGAATGTAGCTGAGTTGATGCAGCTGGGACTTGGAATGTTTATTAGTAGATAGCTCATGAGGATAGGCACTAGACAGATAGTGAAGTATATGATGGATTTGCAATCTCACTCGAAATCACAAACACCTCTAGAAACTGCTCAGCATTTTGTAATTTTCTTTATTTCCATCGGGAGAGTAATAAGTTTCATAAACGGGTCTTTTTATCTTTTGATAGCGTGTCCTTTTATAATGGAATTTATCCTTTGTTTTTTCCTTCTCATTCACTCGGGTCTCTTTCGCTTCATCGATTTTGTCCAGATCCTCCTTTTCTTCCGAAAAAAGGGAAGGAGAAGTAAATTGTGCTCGGTGTCATATGAAACCTTTTCTCTTTTAAGGTCAACCATGAACCATGGAATCTAATGAGCAAGTTTCTGGTTCATGAAGATTATGTATTATGTACAGGACGAAAAATTCCACATTAATCAATGTTTGCTATTGTCCACTTTTCTAGTATTTTCATAGACATCATTTCTCTT ATGAATTTTACTTACCCAAAGTCCAGAAATGCCAAAGAAGAAGAAGAACTCTTTAGGAAGCTGGAAACAGAGAAGCATCGAAGGGATCTATGGATGATTGGAAATGGATTGGGTTACCTTGAAAATCCAGACACTGTCGATCACATCATCCAAGACCCCAGAAGGTTCTTCATCGAACTCCGGCGCTGGCTCGTCGGACCACCAACGGCGGCGTGTCTTCCGGCTGGTTCCGAAGCGAATGCCGGGGTCGAAGCCTTGCTGGGCGGCTTCTTCGTCTTCATTTCTGCGTCTGAACTTCTGGGAACCGAAGGATTCGGCATTGGAGTCCCAAGGACGGTAGTGGGTTGTCGCAGAGGAGAAGCGAAAGCGAGAAGAATGATTGGGGAAAATGGATCGCCATGGATGAGTGAAGCTGAAGCTGGTGGGATGAAGAAGGAGGGCCTTCATTTCGCCACGTTATCCGTTTTTTCGGCACAAAGACGAAGCAAGAAAAATAAGAGCGAAACAGAACTCAGAAATAAAAGTTGGGCGGCTCGAAGCGTGATTGTGAGGGCTCGATCAGCAGCGAGAGGAGAAATGAGGCCTACACCGATGGAGTTCTTTGCGGAGATGGAAGAACAGGGATCGACGGTAGCGATGGACGTGGATGATGTCGATCCACTTGAGATATTAGGCGAGGGAGTGATCTCAGCAGAGAACAAGCTCGCCGATGCCGATTTCTTCAACTCCTTCGAGGACGATTTTGATGACTCCGACATCAACTGAAACAAGATGATTGATGCTATAGGCTGAATGTAGCTGAGTTGATGCAGCTGGGACTTGGAATGTTTATTAGTAGATAGCTCATGAGGATAGGCACTAGACAGATAGTGAAGTATATGATGGATTTGCAATCTCACTCGAAATCACAAACACCTCTAGAAACTGCTCAGCATTTTGTAATTTTCTTTATTTCCATCGGGAGAGTAATAAGTTTCATAAACGGGTCTTTTTATCTTTTGATAGCGTGTCCTTTTATAATGGAATTTATCCTTTGTTTTTTCCTTCTCATTCACTCGGGTCTCTTTCGCTTCATCGATTTTGTCCAGATCCTCCTTTTCTTCCGAAAAAAGGGAAGGAGAAGTAAATTGTGCTCGGTGTCATATGAAACCTTTTCTCTTTTAAGGTCAACCATGAACCATGGAATCTAATGAGCAAGTTTCTGGTTCATGAAGATTATGTATTATGTACAGGACGAAAAATTCCACATTAATCAATGTTTGCTATTGTCCACTTTTCTAGTATTTTCATAGACATCATTTCTCTT ATGAATTTTACTTACCCAAAGTCCAGAAATGCCAAAGAAGAAGAAGAACTCTTTAGGAAGCTGGAAACAGAGAAGCATCGAAGGGATCTATGGATGATTGGAAATGGATTGGGTTACCTTGAAAATCCAGACACTGTCGATCACATCATCCAAGACCCCAGAAGGTTCTTCATCGAACTCCGGCGCTGGCTCGTCGGACCACCAACGGCGGCGTGTCTTCCGGCTGGTTCCGAAGCGAATGCCGGGGTCGAAGCCTTGCTGGGCGGCTTCTTCGTCTTCATTTCTGCGTCTGAACTTCTGGGAACCGAAGGATTCGGCATTGGAGTCCCAAGGACGGTAGTGGGTTGTCGCAGAGGAGAAGCGAAAGCGAGAAGAATGATTGGGGAAAATGGATCGCCATGGATGAGTGAAGCTGAAGCTGGTGGGATGAAGAAGGAGGGCCTTCATTTCGCCACGTTATCCGTTTTTTCGGCACAAAGACGAAGCAAGAAAAATAAGAGCGAAACAGAACTCAGAAATAAAAGTTGGGCGGCTCGAAGCGTGATTGTGAGGGCTCGATCAGCAGCGAGAGGAGAAATGAGGCCTACACCGATGGAGTTCTTTGCGGAGATGGAAGAACAGGGATCGACGGTAGCGATGGACGTGGATGATGTCGATCCACTTGAGATATTAGGCGAGGGAGTGATCTCAGCAGAGAACAAGCTCGCCGATGCCGATTTCTTCAACTCCTTCGAGGACGATTTTGATGACTCCGACATCAACTGA MNFTYPKSRNAKEEEELFRKLETEKHRRDLWMIGNGLGYLENPDTVDHIIQDPRRFFIELRRWLVGPPTAACLPAGSEANAGVEALLGGFFVFISASELLGTEGFGIGVPRTVVGCRRGEAKARRMIGENGSPWMSEAEAGGMKKEGLHFATLSVFSAQRRSKKNKSETELRNKSWAARSVIVRARSAARGEMRPTPMEFFAEMEEQGSTVAMDVDDVDPLEILGEGVISAENKLADADFFNSFEDDFDDSDIN Homology
BLAST of CmoCh08G010160 vs. ExPASy Swiss-Prot
Match: Q9T0H2 (Small acidic protein 1 OS=Arabidopsis thaliana OX=3702 GN=SMAP1 PE=1 SV=1) HSP 1 Score: 80.9 bits (198), Expect = 2.3e-14 Identity = 37/62 (59.68%), Postives = 52/62 (83.87%), Query Frame = 0
BLAST of CmoCh08G010160 vs. ExPASy Swiss-Prot
Match: Q1ECS0 (Small acidic protein 2 OS=Arabidopsis thaliana OX=3702 GN=SMAP2 PE=2 SV=1) HSP 1 Score: 47.8 bits (112), Expect = 2.2e-04 Identity = 32/69 (46.38%), Postives = 41/69 (59.42%), Query Frame = 0
BLAST of CmoCh08G010160 vs. ExPASy TrEMBL
Match: A0A6J1KE12 (small acidic protein 1 OS=Cucurbita maxima OX=3661 GN=LOC111494814 PE=4 SV=1) HSP 1 Score: 122.5 bits (306), Expect = 2.6e-24 Identity = 62/62 (100.00%), Postives = 62/62 (100.00%), Query Frame = 0
BLAST of CmoCh08G010160 vs. ExPASy TrEMBL
Match: A0A6J1HIH2 (small acidic protein 1 OS=Cucurbita moschata OX=3662 GN=LOC111464345 PE=4 SV=1) HSP 1 Score: 122.5 bits (306), Expect = 2.6e-24 Identity = 62/62 (100.00%), Postives = 62/62 (100.00%), Query Frame = 0
BLAST of CmoCh08G010160 vs. ExPASy TrEMBL
Match: A0A6J1CAH2 (small acidic protein 1 OS=Momordica charantia OX=3673 GN=LOC111009862 PE=4 SV=1) HSP 1 Score: 117.5 bits (293), Expect = 8.3e-23 Identity = 59/62 (95.16%), Postives = 60/62 (96.77%), Query Frame = 0
BLAST of CmoCh08G010160 vs. ExPASy TrEMBL
Match: A0A0A0LNK1 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_2G166190 PE=4 SV=1) HSP 1 Score: 116.7 bits (291), Expect = 1.4e-22 Identity = 59/62 (95.16%), Postives = 61/62 (98.39%), Query Frame = 0
BLAST of CmoCh08G010160 vs. ExPASy TrEMBL
Match: A0A5A7SMJ5 (Small acidic protein 1 OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold96G00640 PE=4 SV=1) HSP 1 Score: 116.3 bits (290), Expect = 1.8e-22 Identity = 58/62 (93.55%), Postives = 61/62 (98.39%), Query Frame = 0
BLAST of CmoCh08G010160 vs. NCBI nr
Match: KAG7026130.1 (hypothetical protein SDJN02_12629, partial [Cucurbita argyrosperma subsp. argyrosperma]) HSP 1 Score: 304.3 bits (778), Expect = 9.9e-79 Identity = 152/157 (96.82%), Postives = 152/157 (96.82%), Query Frame = 0
BLAST of CmoCh08G010160 vs. NCBI nr
Match: KAG6593800.1 (Small acidic protein 2, partial [Cucurbita argyrosperma subsp. sororia]) HSP 1 Score: 183.3 bits (464), Expect = 2.5e-42 Identity = 97/98 (98.98%), Postives = 98/98 (100.00%), Query Frame = 0
BLAST of CmoCh08G010160 vs. NCBI nr
Match: KAG7026131.1 (Small acidic protein 1, partial [Cucurbita argyrosperma subsp. argyrosperma]) HSP 1 Score: 183.3 bits (464), Expect = 2.5e-42 Identity = 97/98 (98.98%), Postives = 98/98 (100.00%), Query Frame = 0
BLAST of CmoCh08G010160 vs. NCBI nr
Match: XP_022964281.1 (small acidic protein 1 [Cucurbita moschata] >XP_022964282.1 small acidic protein 1 [Cucurbita moschata] >XP_022964283.1 small acidic protein 1 [Cucurbita moschata] >XP_022964284.1 small acidic protein 1 [Cucurbita moschata] >XP_023000574.1 small acidic protein 1 [Cucurbita maxima] >XP_023000575.1 small acidic protein 1 [Cucurbita maxima] >XP_023000576.1 small acidic protein 1 [Cucurbita maxima] >XP_023000577.1 small acidic protein 1 [Cucurbita maxima]) HSP 1 Score: 122.5 bits (306), Expect = 5.3e-24 Identity = 62/62 (100.00%), Postives = 62/62 (100.00%), Query Frame = 0
BLAST of CmoCh08G010160 vs. NCBI nr
Match: XP_038875245.1 (small acidic protein 1 [Benincasa hispida]) HSP 1 Score: 121.3 bits (303), Expect = 1.2e-23 Identity = 61/62 (98.39%), Postives = 62/62 (100.00%), Query Frame = 0
BLAST of CmoCh08G010160 vs. TAIR 10
Match: AT4G13520.1 (small acidic protein 1 ) HSP 1 Score: 80.9 bits (198), Expect = 1.7e-15 Identity = 37/62 (59.68%), Postives = 52/62 (83.87%), Query Frame = 0
BLAST of CmoCh08G010160 vs. TAIR 10
Match: AT3G24280.1 (small acidic protein 2 ) HSP 1 Score: 47.8 bits (112), Expect = 1.6e-05 Identity = 32/69 (46.38%), Postives = 41/69 (59.42%), Query Frame = 0
The following BLAST results are available for this feature:
Relationships
The following mRNA feature(s) are a part of this gene:
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