CmoCh08G009710 (gene) Cucurbita moschata (Rifu) v1

Overview


Name	CmoCh08G009710
Type	gene
Organism	Cucurbita moschata (Cucurbita moschata (Rifu) v1)
Description	chaperone protein dnaJ 20, chloroplastic-like
Location	Cmo_Chr08: 6303263 .. 6305106 (-)
RNA-Seq Expression	CmoCh08G009710
Synteny	CmoCh08G009710

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonfive_prime_UTRpolypeptideCDSthree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

CCGTAACGGGGGAAGCCAATTCAGACAAGAAATTCACAGGAATTTTTCTGCTTTTGCTCATTCCGTACTTACTTCCGCAGTCGACGAACCAGCGAGTGGTGAAGGTTCATCAGAGGAAGATTTCAGTGACATAATCGGAAGAAGAAATCACAGAGATGCGTGGTTACGGTTTGGCTTTATCTGGTACTGATTCACGTTGCTTTGTACCGGCGATGCCTTCGATTTTCTCTCCGAGAAGAGCCTCTCCGTCGGTAGGAAATTCGCAGGTTCTGTTTCCGAAATCGACACGGACTCCTTCTCTTTGCGTCAGAGCGAAGGCAGCCGTCGTCGACGAGGCGGTTGTCTCCGACGCTGTTGAGATTAGCTTCTACGATCTTTTAGGAATACCGGAGTCGGGGTCTATGGCGGAGATTAAGCAGGCGTACAAGCAGTTGGCTCTGAAATATCATCCGGACGTCTCGCCGCCGGATAGGATCGAGGAGTATACCAGAAAGTTCATCAAGGTTCAGGAGGCGTACGAGACGTTGTCTGATCCTAGTATGAGAGCTTTGTATGATAGAGACATGTTGGGAGGCCTTCACCTTGCTTTCTCTTCTCGAAGACGTGGCAACAACGAGGTACATTTCTTGCCGATTTTTGAGGTCAATTTGGTTTCTGAATCAATTAGGAATCGGATGCCTTCTCTACCTTATTTCATGGCAAATTATTTCGTTTTATTGAGTTGATTTTTGACCTGATTCGAACAATTTCGCGTCCTGATCCTGAATTAATTTCTATGACCTATTCGTTGATTCAACCTGGATTTCTGCAACCTCTCAATCGAGCTTTTCAATTGTTTATCCTACGCGTTCTGCTTGTACATGAATCGGCGTAGGGATTGCGGCTGCAAAAATCTTATGATTTGTTTTTGTATAGGTAATTAGATGAAGAACATAATCTGGTATTTCTTTAAAAAAAAAAAAAACTATTAGTTGAAACATAATTTACAAACTACAGAGGTATATTGACGATATACAAATGTTCTTTGAGGAATTTATTTTAGCAATTGATTAACCATAATTTTAGGATCTTTTGATTCTATCCTCTGTCTCACTTGCTAGTTGCTTAAGCTTGCCGCATGCTTCTATTATACTTTTCAAAATGCCAAAGTCACACAAGACGTTTTAGCGTTAAAATTCTTTACTTCACCATCGTTTCTTAAAATAATCTGTTCTTAATTCAAATGACTCAAGTGTTTCAAAACAGGGATAATCAAGACAAAATTATGATTCCTGGATATAATCATATGGCAGATATCAATTCTCGTAGTTTCTATATCAGAATTTCCTAAATTAAATATGCACTTGTCTGATTCTTTCCTTGAATTACTCAGGAAATGGAAGTGAAAAGTGGGTGGAAGAGCCGTTGGCAGGATCAGCTATCAGGCTTGAGGAGAAGAAGCATGAACAAAGATTCAGGAGCAAGCATGTCGTGGGGAGCTCGAATGCGCAGGCAAAGGGACGAGCTTAACGACGACGACGACGACATGTAATTTGGTTTCTCCCTTGCTCTAAAACTTTCAACCTTCCTGCACATAGCTGATACAATATACAATAGCTGGATTCAAGAGCTTAATTAGCACTCTTTATACACAGCCTACTGAGTACTAGAACTTCTACTTCCACTATGAAACCCAAATTGTTTAGAGCCCAAAAATTGGGAAGTTTTTCATAGGGAATGTAAATCACTAGCAAACTAGTATTCAATGTATATATATATGGAAATTAAAATTTCTCGAGTACTTTGAGTTTCTAAACTGATCTCAGAATAATCTATCAGTGTTTACTTGATCATTCCTTGCTTGA

mRNA sequence

CCGTAACGGGGGAAGCCAATTCAGACAAGAAATTCACAGGAATTTTTCTGCTTTTGCTCATTCCGTACTTACTTCCGCAGTCGACGAACCAGCGAGTGGTGAAGGTTCATCAGAGGAAGATTTCAGTGACATAATCGGAAGAAGAAATCACAGAGATGCGTGGTTACGGTTTGGCTTTATCTGGTACTGATTCACGTTGCTTTGTACCGGCGATGCCTTCGATTTTCTCTCCGAGAAGAGCCTCTCCGTCGGTAGGAAATTCGCAGGTTCTGTTTCCGAAATCGACACGGACTCCTTCTCTTTGCGTCAGAGCGAAGGCAGCCGTCGTCGACGAGGCGGTTGTCTCCGACGCTGTTGAGATTAGCTTCTACGATCTTTTAGGAATACCGGAGTCGGGGTCTATGGCGGAGATTAAGCAGGCGTACAAGCAGTTGGCTCTGAAATATCATCCGGACGTCTCGCCGCCGGATAGGATCGAGGAGTATACCAGAAAGTTCATCAAGGTTCAGGAGGCGTACGAGACGTTGTCTGATCCTAGTATGAGAGCTTTGTATGATAGAGACATGTTGGGAGGCCTTCACCTTGCTTTCTCTTCTCGAAGACGTGGCAACAACGAGGAAATGGAAGTGAAAAGTGGGTGGAAGAGCCGTTGGCAGGATCAGCTATCAGGCTTGAGGAGAAGAAGCATGAACAAAGATTCAGGAGCAAGCATGTCGTGGGGAGCTCGAATGCGCAGGCAAAGGGACGAGCTTAACGACGACGACGACGACATGTAATTTGGTTTCTCCCTTGCTCTAAAACTTTCAACCTTCCTGCACATAGCTGATACAATATACAATAGCTGGATTCAAGAGCTTAATTAGCACTCTTTATACACAGCCTACTGAGTACTAGAACTTCTACTTCCACTATGAAACCCAAATTGTTTAGAGCCCAAAAATTGGGAAGTTTTTCATAGGGAATGTAAATCACTAGCAAACTAGTATTCAATGTATATATATATGGAAATTAAAATTTCTCGAGTACTTTGAGTTTCTAAACTGATCTCAGAATAATCTATCAGTGTTTACTTGATCATTCCTTGCTTGA

Coding sequence (CDS)

ATGCGTGGTTACGGTTTGGCTTTATCTGGTACTGATTCACGTTGCTTTGTACCGGCGATGCCTTCGATTTTCTCTCCGAGAAGAGCCTCTCCGTCGGTAGGAAATTCGCAGGTTCTGTTTCCGAAATCGACACGGACTCCTTCTCTTTGCGTCAGAGCGAAGGCAGCCGTCGTCGACGAGGCGGTTGTCTCCGACGCTGTTGAGATTAGCTTCTACGATCTTTTAGGAATACCGGAGTCGGGGTCTATGGCGGAGATTAAGCAGGCGTACAAGCAGTTGGCTCTGAAATATCATCCGGACGTCTCGCCGCCGGATAGGATCGAGGAGTATACCAGAAAGTTCATCAAGGTTCAGGAGGCGTACGAGACGTTGTCTGATCCTAGTATGAGAGCTTTGTATGATAGAGACATGTTGGGAGGCCTTCACCTTGCTTTCTCTTCTCGAAGACGTGGCAACAACGAGGAAATGGAAGTGAAAAGTGGGTGGAAGAGCCGTTGGCAGGATCAGCTATCAGGCTTGAGGAGAAGAAGCATGAACAAAGATTCAGGAGCAAGCATGTCGTGGGGAGCTCGAATGCGCAGGCAAAGGGACGAGCTTAACGACGACGACGACGACATGTAA

Protein sequence

MRGYGLALSGTDSRCFVPAMPSIFSPRRASPSVGNSQVLFPKSTRTPSLCVRAKAAVVDEAVVSDAVEISFYDLLGIPESGSMAEIKQAYKQLALKYHPDVSPPDRIEEYTRKFIKVQEAYETLSDPSMRALYDRDMLGGLHLAFSSRRRGNNEEMEVKSGWKSRWQDQLSGLRRRSMNKDSGASMSWGARMRRQRDELNDDDDDM

Homology

[Close]

BLAST of CmoCh08G009710 vs. ExPASy Swiss-Prot
Match: Q9SDN0 (Chaperone protein dnaJ 20, chloroplastic OS=Arabidopsis thaliana OX=3702 GN=ATJ20 PE=1 SV=2)

HSP 1 Score: 174.9 bits (442), Expect = 9.6e-43
Identity = 93/157 (59.24%), Postives = 115/157 (73.25%), Query Frame = 0


Query: 44  TRTPSLCVRAKAAVVDEAVVSDAVEISFYDLLGIPESGSMAEIKQAYKQLALKYHPDVSP 103
           TRT     R ++ +  +  V  + ++SFYDLLG+ ES ++ EIKQAYKQLA KYHPDVSP
Sbjct: 40  TRTRFSSTRIQSRLTHDDPVKQSEDLSFYDLLGVTESVTLPEIKQAYKQLARKYHPDVSP 99

Query: 104 PDRIEEYTRKFIKVQEAYETLSDPSMRALYDRDMLGGLHLAFSSRR--RGNNEEMEVKSG 163
           PDR+EEYT +FI+VQEAYETLSDP  R LYDRD+  G   +FS RR  R + E +E KS 
Sbjct: 100 PDRVEEYTDRFIRVQEAYETLSDPRRRVLYDRDLSMGFSFSFSGRRQNRYDQEVVEEKSE 159

Query: 164 WKSRWQDQLSGLRRRSMNKDSGASMSWGARMRRQRDE 199
           WK++WQ QLSGLRRRS  KD+  +MSW ARMRRQ+ E
Sbjct: 160 WKAKWQTQLSGLRRRSNQKDNN-TMSWAARMRRQQQE 195

[Close]

BLAST of CmoCh08G009710 vs. ExPASy Swiss-Prot
Match: Q9WZV3 (Chaperone protein DnaJ OS=Thermotoga maritima (strain ATCC 43589 / DSM 3109 / JCM 10099 / NBRC 100826 / MSB8) OX=243274 GN=dnaJ PE=3 SV=1)

HSP 1 Score: 72.8 bits (177), Expect = 5.1e-12
Identity = 32/65 (49.23%), Postives = 48/65 (73.85%), Query Frame = 0


Query: 71  FYDLLGIPESGSMAEIKQAYKQLALKYHPDVSPPDRIEEYTRKFIKVQEAYETLSDPSMR 130
           +Y++LG+P   +  EIK+AYK+L  ++HPD  P +R +E  ++F ++QEAYE LSDP  R
Sbjct: 8   YYEILGVPRDATQEEIKRAYKRLVKEWHPDRHPENR-KEAEQRFKEIQEAYEVLSDPQKR 67

Query: 131 ALYDR 136
           A+YDR
Sbjct: 68  AMYDR 71

[Close]

BLAST of CmoCh08G009710 vs. ExPASy Swiss-Prot
Match: A5IIT4 (Chaperone protein DnaJ OS=Thermotoga petrophila (strain ATCC BAA-488 / DSM 13995 / JCM 10881 / RKU-1) OX=390874 GN=dnaJ PE=3 SV=1)

HSP 1 Score: 72.8 bits (177), Expect = 5.1e-12
Identity = 32/65 (49.23%), Postives = 48/65 (73.85%), Query Frame = 0


Query: 71  FYDLLGIPESGSMAEIKQAYKQLALKYHPDVSPPDRIEEYTRKFIKVQEAYETLSDPSMR 130
           +Y++LG+P   +  EIK+AYK+L  ++HPD  P +R +E  ++F ++QEAYE LSDP  R
Sbjct: 8   YYEILGVPRDATQEEIKRAYKRLVKEWHPDRHPENR-KEAEQRFKEIQEAYEVLSDPQKR 67

Query: 131 ALYDR 136
           A+YDR
Sbjct: 68  AMYDR 71

[Close]

BLAST of CmoCh08G009710 vs. ExPASy Swiss-Prot
Match: B1LCI2 (Chaperone protein DnaJ OS=Thermotoga sp. (strain RQ2) OX=126740 GN=dnaJ PE=3 SV=1)

HSP 1 Score: 72.8 bits (177), Expect = 5.1e-12
Identity = 32/65 (49.23%), Postives = 48/65 (73.85%), Query Frame = 0


Query: 71  FYDLLGIPESGSMAEIKQAYKQLALKYHPDVSPPDRIEEYTRKFIKVQEAYETLSDPSMR 130
           +Y++LG+P   +  EIK+AYK+L  ++HPD  P +R +E  ++F ++QEAYE LSDP  R
Sbjct: 8   YYEILGVPRDATQEEIKRAYKRLVKEWHPDRHPENR-KEAEQRFKEIQEAYEVLSDPQKR 67

Query: 131 ALYDR 136
           A+YDR
Sbjct: 68  AMYDR 71

[Close]

BLAST of CmoCh08G009710 vs. ExPASy Swiss-Prot
Match: Q05646 (Chaperone protein DnaJ OS=Erysipelothrix rhusiopathiae OX=1648 GN=dnaJ PE=2 SV=1)

HSP 1 Score: 72.4 bits (176), Expect = 6.7e-12
Identity = 36/65 (55.38%), Postives = 47/65 (72.31%), Query Frame = 0


Query: 71  FYDLLGIPESGSMAEIKQAYKQLALKYHPDVSPPDRIEEYTRKFIKVQEAYETLSDPSMR 130
           FY++LG+ +S + AEIK+AY+QLA KYHPD++  D  E    KF +VQEAYE LSD   R
Sbjct: 7   FYEILGVSKSATDAEIKKAYRQLAKKYHPDINKEDGAE---AKFKEVQEAYEVLSDSQKR 66

Query: 131 ALYDR 136
           A YD+
Sbjct: 67  ANYDQ 68

[Close]

BLAST of CmoCh08G009710 vs. ExPASy TrEMBL
Match: A0A6J1HHM6 (chaperone protein dnaJ 20, chloroplastic-like OS=Cucurbita moschata OX=3662 GN=LOC111464407 PE=4 SV=1)

HSP 1 Score: 406.4 bits (1043), Expect = 7.3e-110
Identity = 206/206 (100.00%), Postives = 206/206 (100.00%), Query Frame = 0


Query: 1   MRGYGLALSGTDSRCFVPAMPSIFSPRRASPSVGNSQVLFPKSTRTPSLCVRAKAAVVDE 60
           MRGYGLALSGTDSRCFVPAMPSIFSPRRASPSVGNSQVLFPKSTRTPSLCVRAKAAVVDE
Sbjct: 1   MRGYGLALSGTDSRCFVPAMPSIFSPRRASPSVGNSQVLFPKSTRTPSLCVRAKAAVVDE 60

Query: 61  AVVSDAVEISFYDLLGIPESGSMAEIKQAYKQLALKYHPDVSPPDRIEEYTRKFIKVQEA 120
           AVVSDAVEISFYDLLGIPESGSMAEIKQAYKQLALKYHPDVSPPDRIEEYTRKFIKVQEA
Sbjct: 61  AVVSDAVEISFYDLLGIPESGSMAEIKQAYKQLALKYHPDVSPPDRIEEYTRKFIKVQEA 120

Query: 121 YETLSDPSMRALYDRDMLGGLHLAFSSRRRGNNEEMEVKSGWKSRWQDQLSGLRRRSMNK 180
           YETLSDPSMRALYDRDMLGGLHLAFSSRRRGNNEEMEVKSGWKSRWQDQLSGLRRRSMNK
Sbjct: 121 YETLSDPSMRALYDRDMLGGLHLAFSSRRRGNNEEMEVKSGWKSRWQDQLSGLRRRSMNK 180

Query: 181 DSGASMSWGARMRRQRDELNDDDDDM 207
           DSGASMSWGARMRRQRDELNDDDDDM
Sbjct: 181 DSGASMSWGARMRRQRDELNDDDDDM 206

[Close]

BLAST of CmoCh08G009710 vs. ExPASy TrEMBL
Match: A0A6J1KFW2 (chaperone protein dnaJ 20, chloroplastic OS=Cucurbita maxima OX=3661 GN=LOC111494708 PE=4 SV=1)

HSP 1 Score: 388.3 bits (996), Expect = 2.0e-104
Identity = 195/206 (94.66%), Postives = 202/206 (98.06%), Query Frame = 0


Query: 1   MRGYGLALSGTDSRCFVPAMPSIFSPRRASPSVGNSQVLFPKSTRTPSLCVRAKAAVVDE 60
           MRGYGLALSGTDSRCFVPAMP IFSPRRASPSVGNSQVLFPKSTR PSLCVRAKAAVV+E
Sbjct: 1   MRGYGLALSGTDSRCFVPAMPPIFSPRRASPSVGNSQVLFPKSTRNPSLCVRAKAAVVNE 60

Query: 61  AVVSDAVEISFYDLLGIPESGSMAEIKQAYKQLALKYHPDVSPPDRIEEYTRKFIKVQEA 120
           A+VSDAVEISFYDLLGIPESGSMAEIKQAYKQ+ALKYHPDVSPPDRIEEYTRKFIKVQEA
Sbjct: 61  ALVSDAVEISFYDLLGIPESGSMAEIKQAYKQMALKYHPDVSPPDRIEEYTRKFIKVQEA 120

Query: 121 YETLSDPSMRALYDRDMLGGLHLAFSSRRRGNNEEMEVKSGWKSRWQDQLSGLRRRSMNK 180
           YETLSDP MRALYDRDMLGGLHLAFS+RRRGNNEEMEVKSGWKS WQDQLSGLRRRSMNK
Sbjct: 121 YETLSDPRMRALYDRDMLGGLHLAFSARRRGNNEEMEVKSGWKSLWQDQLSGLRRRSMNK 180

Query: 181 DSGASMSWGARMRRQRDELNDDDDDM 207
           DSGASMSWGARMRRQRDELNDD+D++
Sbjct: 181 DSGASMSWGARMRRQRDELNDDEDEV 206

[Close]

BLAST of CmoCh08G009710 vs. ExPASy TrEMBL
Match: A0A6J1H3S2 (chaperone protein dnaJ 20, chloroplastic-like OS=Cucurbita moschata OX=3662 GN=LOC111460232 PE=4 SV=1)

HSP 1 Score: 327.8 bits (839), Expect = 3.3e-86
Identity = 167/205 (81.46%), Postives = 183/205 (89.27%), Query Frame = 0


Query: 1   MRGYGLALSGTDSRCFVPAMPSIFSPRRASPSVGNSQVLFPKSTRTPSLCVRAKAAVVDE 60
           MR  GLALSGTDSRC++PAMP IFSP RA P  GNSQVLFPK TR PS CVRAKA VV+E
Sbjct: 1   MRSCGLALSGTDSRCYLPAMPPIFSPMRACPPEGNSQVLFPKLTRPPSACVRAKATVVNE 60

Query: 61  AVVSDAVEISFYDLLGIPESGSMAEIKQAYKQLALKYHPDVSPPDRIEEYTRKFIKVQEA 120
           A+VSDAVEISFY+LLG+PESGSM EIKQAYKQ+A KYHPDVSPPDRIEEYTRKFIKVQEA
Sbjct: 61  ALVSDAVEISFYELLGVPESGSMVEIKQAYKQMARKYHPDVSPPDRIEEYTRKFIKVQEA 120

Query: 121 YETLSDPSMRALYDRDMLGGLHLAFSSRRRG-NNEEMEVKSGWKSRWQDQLSGLRRRSMN 180
           YETLSDP MR LYDRDM  GLHLAFS+RRRG N+EEM+ K GWKSRWQDQLS L+RRSMN
Sbjct: 121 YETLSDPVMRDLYDRDMARGLHLAFSARRRGYNHEEMDEKGGWKSRWQDQLSELKRRSMN 180

Query: 181 KDSGASMSWGARMRRQRDELNDDDD 205
           K+S A+MSWGARMRRQRDEL++DD+
Sbjct: 181 KNSRANMSWGARMRRQRDELHNDDN 205

[Close]

BLAST of CmoCh08G009710 vs. ExPASy TrEMBL
Match: A0A6J1KVG4 (chaperone protein dnaJ 20, chloroplastic-like OS=Cucurbita maxima OX=3661 GN=LOC111499073 PE=4 SV=1)

HSP 1 Score: 324.7 bits (831), Expect = 2.8e-85
Identity = 166/205 (80.98%), Postives = 180/205 (87.80%), Query Frame = 0


Query: 1   MRGYGLALSGTDSRCFVPAMPSIFSPRRASPSVGNSQVLFPKSTRTPSLCVRAKAAVVDE 60
           MR  GLALSGTDSRC++PAMP IFSP RA P  GNSQVLFPK TR PS CVRAKA VV E
Sbjct: 1   MRSCGLALSGTDSRCYLPAMPPIFSPMRACPLDGNSQVLFPKLTRPPSACVRAKATVVKE 60

Query: 61  AVVSDAVEISFYDLLGIPESGSMAEIKQAYKQLALKYHPDVSPPDRIEEYTRKFIKVQEA 120
            +VSDA+EISFY+LLG+PESGSM EIKQAYKQ+A KYHPDVSPPDRIEEYTRKFIKVQEA
Sbjct: 61  TLVSDAIEISFYELLGVPESGSMVEIKQAYKQMARKYHPDVSPPDRIEEYTRKFIKVQEA 120

Query: 121 YETLSDPSMRALYDRDMLGGLHLAFSSRRRG-NNEEMEVKSGWKSRWQDQLSGLRRRSMN 180
           YETLSDP MR LYDRDM  GLHLAFS+RRRG N+EEME K GWKSRWQDQLS L+RRSMN
Sbjct: 121 YETLSDPVMRDLYDRDMARGLHLAFSARRRGYNHEEMEEKGGWKSRWQDQLSELKRRSMN 180

Query: 181 KDSGASMSWGARMRRQRDELNDDDD 205
           K+S A+MSWGARMRRQ DEL+DDD+
Sbjct: 181 KNSRANMSWGARMRRQGDELHDDDN 205

[Close]

BLAST of CmoCh08G009710 vs. ExPASy TrEMBL
Match: A0A6J1CE65 (chaperone protein dnaJ 20, chloroplastic-like OS=Momordica charantia OX=3673 GN=LOC111009883 PE=4 SV=1)

HSP 1 Score: 302.0 bits (772), Expect = 1.9e-78
Identity = 155/198 (78.28%), Postives = 174/198 (87.88%), Query Frame = 0


Query: 1   MRGYGLALSGTDSRCFVPAMPSIFSPRRASPSVGNSQVLFPKSTRTPSLCVRAKAAVVDE 60
           MR YGLALSGTDSRC++PAMP IFSPRRASP  GNSQV FPKS R PS  VRAK AVV+E
Sbjct: 1   MRCYGLALSGTDSRCYLPAMPPIFSPRRASPXEGNSQVSFPKSVRHPSASVRAK-AVVNE 60

Query: 61  AVVSDAVEISFYDLLGIPESGSMAEIKQAYKQLALKYHPDVSPPDRIEEYTRKFIKVQEA 120
            +VS+AVE+SFY+LLG+PESGS+ EIKQAYKQ+A KYHPDVSPPDRIEEYTRKFIKVQEA
Sbjct: 61  VLVSEAVELSFYELLGVPESGSLVEIKQAYKQMARKYHPDVSPPDRIEEYTRKFIKVQEA 120

Query: 121 YETLSDPSMRALYDRDMLGGLHLAFSSRRRGNN-EEMEVKSGWKSRWQDQLSGLRRRSMN 180
           YETLSDP  RALYDRDM  GLHLAFS+RRR +N E+ME KSGWK+RW+DQLS L+RRSM 
Sbjct: 121 YETLSDPGTRALYDRDMARGLHLAFSARRRHDNCEDMEEKSGWKNRWEDQLSELKRRSMY 180

Query: 181 KDSGASMSWGARMRRQRD 198
           KDS  +MSWGARMRRQ++
Sbjct: 181 KDSRENMSWGARMRRQKN 197

[Close]

BLAST of CmoCh08G009710 vs. NCBI nr
Match: XP_022964372.1 (chaperone protein dnaJ 20, chloroplastic-like [Cucurbita moschata])

HSP 1 Score: 406.4 bits (1043), Expect = 1.5e-109
Identity = 206/206 (100.00%), Postives = 206/206 (100.00%), Query Frame = 0


Query: 1   MRGYGLALSGTDSRCFVPAMPSIFSPRRASPSVGNSQVLFPKSTRTPSLCVRAKAAVVDE 60
           MRGYGLALSGTDSRCFVPAMPSIFSPRRASPSVGNSQVLFPKSTRTPSLCVRAKAAVVDE
Sbjct: 1   MRGYGLALSGTDSRCFVPAMPSIFSPRRASPSVGNSQVLFPKSTRTPSLCVRAKAAVVDE 60

Query: 61  AVVSDAVEISFYDLLGIPESGSMAEIKQAYKQLALKYHPDVSPPDRIEEYTRKFIKVQEA 120
           AVVSDAVEISFYDLLGIPESGSMAEIKQAYKQLALKYHPDVSPPDRIEEYTRKFIKVQEA
Sbjct: 61  AVVSDAVEISFYDLLGIPESGSMAEIKQAYKQLALKYHPDVSPPDRIEEYTRKFIKVQEA 120

Query: 121 YETLSDPSMRALYDRDMLGGLHLAFSSRRRGNNEEMEVKSGWKSRWQDQLSGLRRRSMNK 180
           YETLSDPSMRALYDRDMLGGLHLAFSSRRRGNNEEMEVKSGWKSRWQDQLSGLRRRSMNK
Sbjct: 121 YETLSDPSMRALYDRDMLGGLHLAFSSRRRGNNEEMEVKSGWKSRWQDQLSGLRRRSMNK 180

Query: 181 DSGASMSWGARMRRQRDELNDDDDDM 207
           DSGASMSWGARMRRQRDELNDDDDDM
Sbjct: 181 DSGASMSWGARMRRQRDELNDDDDDM 206

[Close]

BLAST of CmoCh08G009710 vs. NCBI nr
Match: KAG6593757.1 (Chaperone protein dnaJ 20, chloroplastic, partial [Cucurbita argyrosperma subsp. sororia])

HSP 1 Score: 392.5 bits (1007), Expect = 2.2e-105
Identity = 199/206 (96.60%), Postives = 202/206 (98.06%), Query Frame = 0


Query: 1   MRGYGLALSGTDSRCFVPAMPSIFSPRRASPSVGNSQVLFPKSTRTPSLCVRAKAAVVDE 60
           MRGYGLALSGTDSRCFVPAMP IFSPRRAS SVGNSQVLFPKSTRTPSLCVRAKAAVVDE
Sbjct: 1   MRGYGLALSGTDSRCFVPAMPPIFSPRRASSSVGNSQVLFPKSTRTPSLCVRAKAAVVDE 60

Query: 61  AVVSDAVEISFYDLLGIPESGSMAEIKQAYKQLALKYHPDVSPPDRIEEYTRKFIKVQEA 120
           AVVSDAVEISFYDLLGIPESGSMAEIKQAYKQLA KYHPDVSPPDRIEEYTRKFIKVQEA
Sbjct: 61  AVVSDAVEISFYDLLGIPESGSMAEIKQAYKQLARKYHPDVSPPDRIEEYTRKFIKVQEA 120

Query: 121 YETLSDPSMRALYDRDMLGGLHLAFSSRRRGNNEEMEVKSGWKSRWQDQLSGLRRRSMNK 180
           YETLSDPSMRALYDRDMLGGLHLAFS+RRRGNNEEMEVKSGWKSRWQDQLSGLR RSMNK
Sbjct: 121 YETLSDPSMRALYDRDMLGGLHLAFSARRRGNNEEMEVKSGWKSRWQDQLSGLRTRSMNK 180

Query: 181 DSGASMSWGARMRRQRDELNDDDDDM 207
           DSGASMSWGARMRRQRDELNDD+DD+
Sbjct: 181 DSGASMSWGARMRRQRDELNDDEDDV 206

[Close]

BLAST of CmoCh08G009710 vs. NCBI nr
Match: KAG7026089.1 (Chaperone protein dnaJ 20, chloroplastic [Cucurbita argyrosperma subsp. argyrosperma])

HSP 1 Score: 389.8 bits (1000), Expect = 1.5e-104
Identity = 198/206 (96.12%), Postives = 201/206 (97.57%), Query Frame = 0


Query: 1   MRGYGLALSGTDSRCFVPAMPSIFSPRRASPSVGNSQVLFPKSTRTPSLCVRAKAAVVDE 60
           MRGYGLALSGTDSRCFVPAMP IFSPRRAS SVGNSQVLFPKSTRTPSLCVRAKAAVVDE
Sbjct: 1   MRGYGLALSGTDSRCFVPAMPPIFSPRRASSSVGNSQVLFPKSTRTPSLCVRAKAAVVDE 60

Query: 61  AVVSDAVEISFYDLLGIPESGSMAEIKQAYKQLALKYHPDVSPPDRIEEYTRKFIKVQEA 120
           AVVSDAVEISFYDLLGIPESGSMAEIKQAYKQLA KYHPDVSPP RIEEYTRKFIKVQEA
Sbjct: 61  AVVSDAVEISFYDLLGIPESGSMAEIKQAYKQLARKYHPDVSPPGRIEEYTRKFIKVQEA 120

Query: 121 YETLSDPSMRALYDRDMLGGLHLAFSSRRRGNNEEMEVKSGWKSRWQDQLSGLRRRSMNK 180
           YETLSDPSMRALYDRDMLGGLHLAFS+RRRGNNEEMEVKSGWKSRWQDQLSGLR RSMNK
Sbjct: 121 YETLSDPSMRALYDRDMLGGLHLAFSARRRGNNEEMEVKSGWKSRWQDQLSGLRTRSMNK 180

Query: 181 DSGASMSWGARMRRQRDELNDDDDDM 207
           DSGASMSWGARMRRQRDELNDD+DD+
Sbjct: 181 DSGASMSWGARMRRQRDELNDDEDDV 206

[Close]

BLAST of CmoCh08G009710 vs. NCBI nr
Match: XP_023000441.1 (chaperone protein dnaJ 20, chloroplastic [Cucurbita maxima])

HSP 1 Score: 388.3 bits (996), Expect = 4.2e-104
Identity = 195/206 (94.66%), Postives = 202/206 (98.06%), Query Frame = 0


Query: 1   MRGYGLALSGTDSRCFVPAMPSIFSPRRASPSVGNSQVLFPKSTRTPSLCVRAKAAVVDE 60
           MRGYGLALSGTDSRCFVPAMP IFSPRRASPSVGNSQVLFPKSTR PSLCVRAKAAVV+E
Sbjct: 1   MRGYGLALSGTDSRCFVPAMPPIFSPRRASPSVGNSQVLFPKSTRNPSLCVRAKAAVVNE 60

Query: 61  AVVSDAVEISFYDLLGIPESGSMAEIKQAYKQLALKYHPDVSPPDRIEEYTRKFIKVQEA 120
           A+VSDAVEISFYDLLGIPESGSMAEIKQAYKQ+ALKYHPDVSPPDRIEEYTRKFIKVQEA
Sbjct: 61  ALVSDAVEISFYDLLGIPESGSMAEIKQAYKQMALKYHPDVSPPDRIEEYTRKFIKVQEA 120

Query: 121 YETLSDPSMRALYDRDMLGGLHLAFSSRRRGNNEEMEVKSGWKSRWQDQLSGLRRRSMNK 180
           YETLSDP MRALYDRDMLGGLHLAFS+RRRGNNEEMEVKSGWKS WQDQLSGLRRRSMNK
Sbjct: 121 YETLSDPRMRALYDRDMLGGLHLAFSARRRGNNEEMEVKSGWKSLWQDQLSGLRRRSMNK 180

Query: 181 DSGASMSWGARMRRQRDELNDDDDDM 207
           DSGASMSWGARMRRQRDELNDD+D++
Sbjct: 181 DSGASMSWGARMRRQRDELNDDEDEV 206

[Close]

BLAST of CmoCh08G009710 vs. NCBI nr
Match: XP_023513423.1 (chaperone protein dnaJ 20, chloroplastic-like [Cucurbita pepo subsp. pepo])

HSP 1 Score: 386.3 bits (991), Expect = 1.6e-103
Identity = 196/206 (95.15%), Postives = 201/206 (97.57%), Query Frame = 0


Query: 1   MRGYGLALSGTDSRCFVPAMPSIFSPRRASPSVGNSQVLFPKSTRTPSLCVRAKAAVVDE 60
           MRGYGLALSGTDSR  +PAMP IFSPRRAS SVGNSQVLFPKSTRTPSLCVRAKAAVVDE
Sbjct: 1   MRGYGLALSGTDSRSLLPAMPPIFSPRRASSSVGNSQVLFPKSTRTPSLCVRAKAAVVDE 60

Query: 61  AVVSDAVEISFYDLLGIPESGSMAEIKQAYKQLALKYHPDVSPPDRIEEYTRKFIKVQEA 120
           AVVSDAVEISFYDLLGIPESGSMAEIKQAYKQLA KYHPDVSPPDRIEEYTRKFIKVQEA
Sbjct: 61  AVVSDAVEISFYDLLGIPESGSMAEIKQAYKQLARKYHPDVSPPDRIEEYTRKFIKVQEA 120

Query: 121 YETLSDPSMRALYDRDMLGGLHLAFSSRRRGNNEEMEVKSGWKSRWQDQLSGLRRRSMNK 180
           YETLSDPSMRALYDRDMLGGLHLAFS+RRRGNNEEMEVKSGWKSRW+DQLSGLRRRSMNK
Sbjct: 121 YETLSDPSMRALYDRDMLGGLHLAFSARRRGNNEEMEVKSGWKSRWEDQLSGLRRRSMNK 180

Query: 181 DSGASMSWGARMRRQRDELNDDDDDM 207
           DSGASMSWGARMRRQRDELNDD+DD+
Sbjct: 181 DSGASMSWGARMRRQRDELNDDEDDV 206

[Close]

BLAST of CmoCh08G009710 vs. TAIR 10
Match: AT4G13830.2 (DNAJ-like 20 )

HSP 1 Score: 174.9 bits (442), Expect = 6.8e-44
Identity = 93/157 (59.24%), Postives = 115/157 (73.25%), Query Frame = 0


Query: 44  TRTPSLCVRAKAAVVDEAVVSDAVEISFYDLLGIPESGSMAEIKQAYKQLALKYHPDVSP 103
           TRT     R ++ +  +  V  + ++SFYDLLG+ ES ++ EIKQAYKQLA KYHPDVSP
Sbjct: 40  TRTRFSSTRIQSRLTHDDPVKQSEDLSFYDLLGVTESVTLPEIKQAYKQLARKYHPDVSP 99

Query: 104 PDRIEEYTRKFIKVQEAYETLSDPSMRALYDRDMLGGLHLAFSSRR--RGNNEEMEVKSG 163
           PDR+EEYT +FI+VQEAYETLSDP  R LYDRD+  G   +FS RR  R + E +E KS 
Sbjct: 100 PDRVEEYTDRFIRVQEAYETLSDPRRRVLYDRDLSMGFSFSFSGRRQNRYDQEVVEEKSE 159

Query: 164 WKSRWQDQLSGLRRRSMNKDSGASMSWGARMRRQRDE 199
           WK++WQ QLSGLRRRS  KD+  +MSW ARMRRQ+ E
Sbjct: 160 WKAKWQTQLSGLRRRSNQKDNN-TMSWAARMRRQQQE 195

[Close]

BLAST of CmoCh08G009710 vs. TAIR 10
Match: AT4G13830.1 (DNAJ-like 20 )

HSP 1 Score: 129.4 bits (324), Expect = 3.3e-30
Identity = 63/113 (55.75%), Postives = 82/113 (72.57%), Query Frame = 0


Query: 44  TRTPSLCVRAKAAVVDEAVVSDAVEISFYDLLGIPESGSMAEIKQAYKQLALKYHPDVSP 103
           TRT     R ++ +  +  V  + ++SFYDLLG+ ES ++ EIKQAYKQLA KYHPDVSP
Sbjct: 40  TRTRFSSTRIQSRLTHDDPVKQSEDLSFYDLLGVTESVTLPEIKQAYKQLARKYHPDVSP 99

Query: 104 PDRIEEYTRKFIKVQEAYETLSDPSMRALYDRDMLGGLHLAFSSRRRGNNEEM 157
           PDR+EEYT +FI+VQEAYETLSDP  R LYDRD+  G   +FS RR+   +++
Sbjct: 100 PDRVEEYTDRFIRVQEAYETLSDPRRRVLYDRDLSMGFSFSFSGRRQNRYDQV 152

[Close]

BLAST of CmoCh08G009710 vs. TAIR 10
Match: AT3G62600.1 (DNAJ heat shock family protein )

HSP 1 Score: 68.6 bits (166), Expect = 6.9e-12
Identity = 36/82 (43.90%), Postives = 53/82 (64.63%), Query Frame = 0


Query: 70  SFYDLLGIPESGSMAEIKQAYKQLALKYHPDVSPPDRIEEYTRKFIKVQEAYETLSDPSM 129
           S+YD+L +P+  S  +IK+AY++LALKYHPD +  +  EE TRKF ++  AYE LSD   
Sbjct: 26  SYYDVLQVPKGASDEQIKRAYRKLALKYHPDKNQGN--EEATRKFAEINNAYEVLSDEEK 85

Query: 130 RALYDRDMLGGLHLAFSSRRRG 152
           R +Y++    GL    ++  RG
Sbjct: 86  REIYNKYGEEGLKQFSANGGRG 105

[Close]

BLAST of CmoCh08G009710 vs. TAIR 10
Match: AT1G59980.1 (ARG1-like 2 )

HSP 1 Score: 64.7 bits (156), Expect = 1.0e-10
Identity = 31/63 (49.21%), Postives = 42/63 (66.67%), Query Frame = 0


Query: 72  YDLLGIPESGSMAEIKQAYKQLALKYHPDVSPPDRIEEYTRKFIKVQEAYETLSDPSMRA 131
           Y++LGIP + +  EIK AY+++AL+YHPD +P D +      F +V  AYE LSDP  R 
Sbjct: 25  YEVLGIPSNSTDQEIKSAYRRMALRYHPDKNPDDPVA--AEMFKEVTFAYEVLSDPENRR 84

Query: 132 LYD 135
           LYD
Sbjct: 85  LYD 85

[Close]

BLAST of CmoCh08G009710 vs. TAIR 10
Match: AT5G01390.1 (DNAJ heat shock family protein )

HSP 1 Score: 64.7 bits (156), Expect = 1.0e-10
Identity = 31/76 (40.79%), Postives = 52/76 (68.42%), Query Frame = 0


Query: 69  ISFYDLLGIPESGSMAEIKQAYKQLALKYHPDVSPPDRIEEYTRKFIKVQEAYETLSDPS 128
           + FY +L +  S +  E+K+AY++LA+K+HPD +P ++ +E   KF ++ EAY+ LSDP 
Sbjct: 3   VDFYKVLEVDRSANDDELKKAYRKLAMKWHPDKNPNNK-KEAEAKFKQISEAYDVLSDPQ 62

Query: 129 MRALYDRDMLGGLHLA 145
            RA+Y++    GL+ A
Sbjct: 63  KRAIYEQYGEEGLNQA 77

The following BLAST results are available for this feature:

BLAST of CmoCh08G009710 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
Q9SDN0	9.6e-43	59.24	Chaperone protein dnaJ 20, chloroplastic OS=Arabidopsis thaliana OX=3702 GN=ATJ2...	[more]
Q9WZV3	5.1e-12	49.23	Chaperone protein DnaJ OS=Thermotoga maritima (strain ATCC 43589 / DSM 3109 / JC...	[more]
A5IIT4	5.1e-12	49.23	Chaperone protein DnaJ OS=Thermotoga petrophila (strain ATCC BAA-488 / DSM 13995...	[more]
B1LCI2	5.1e-12	49.23	Chaperone protein DnaJ OS=Thermotoga sp. (strain RQ2) OX=126740 GN=dnaJ PE=3 SV=...	[more]
Q05646	6.7e-12	55.38	Chaperone protein DnaJ OS=Erysipelothrix rhusiopathiae OX=1648 GN=dnaJ PE=2 SV=1	[more]

BLAST of CmoCh08G009710 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A6J1HHM6	7.3e-110	100.00	chaperone protein dnaJ 20, chloroplastic-like OS=Cucurbita moschata OX=3662 GN=L...	[more]
A0A6J1KFW2	2.0e-104	94.66	chaperone protein dnaJ 20, chloroplastic OS=Cucurbita maxima OX=3661 GN=LOC11149...	[more]
A0A6J1H3S2	3.3e-86	81.46	chaperone protein dnaJ 20, chloroplastic-like OS=Cucurbita moschata OX=3662 GN=L...	[more]
A0A6J1KVG4	2.8e-85	80.98	chaperone protein dnaJ 20, chloroplastic-like OS=Cucurbita maxima OX=3661 GN=LOC...	[more]
A0A6J1CE65	1.9e-78	78.28	chaperone protein dnaJ 20, chloroplastic-like OS=Momordica charantia OX=3673 GN=...	[more]

BLAST of CmoCh08G009710 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_022964372.1	1.5e-109	100.00	chaperone protein dnaJ 20, chloroplastic-like [Cucurbita moschata]	[more]
KAG6593757.1	2.2e-105	96.60	Chaperone protein dnaJ 20, chloroplastic, partial [Cucurbita argyrosperma subsp....	[more]
KAG7026089.1	1.5e-104	96.12	Chaperone protein dnaJ 20, chloroplastic [Cucurbita argyrosperma subsp. argyrosp...	[more]
XP_023000441.1	4.2e-104	94.66	chaperone protein dnaJ 20, chloroplastic [Cucurbita maxima]	[more]
XP_023513423.1	1.6e-103	95.15	chaperone protein dnaJ 20, chloroplastic-like [Cucurbita pepo subsp. pepo]	[more]

BLAST of CmoCh08G009710 vs. TAIR 10


Match Name	E-value	Identity	Description
AT4G13830.2	6.8e-44	59.24	DNAJ-like 20	[more]
AT4G13830.1	3.3e-30	55.75	DNAJ-like 20	[more]
AT3G62600.1	6.9e-12	43.90	DNAJ heat shock family protein	[more]
AT1G59980.1	1.0e-10	49.21	ARG1-like 2	[more]
AT5G01390.1	1.0e-10	40.79	DNAJ heat shock family protein	[more]

InterPro

Analysis Name: InterPro Annotations of Cucurbita moschata (Rifu) v1
Date Performed: 2021-10-25


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR001623	DnaJ domain	PRINTS	PR00625	JDOMAIN	coord: 109..129 score: 41.42 coord: 90..105 score: 51.19 coord: 72..90 score: 43.13
IPR001623	DnaJ domain	SMART	SM00271	dnaj_3	coord: 69..129 e-value: 8.2E-22 score: 88.5
IPR001623	DnaJ domain	PFAM	PF00226	DnaJ	coord: 71..134 e-value: 1.9E-21 score: 75.9
IPR001623	DnaJ domain	PROSITE	PS50076	DNAJ_2	coord: 70..137 score: 19.840027
IPR001623	DnaJ domain	CDD	cd06257	DnaJ	coord: 71..126 e-value: 4.75581E-22 score: 82.9785
IPR036869	Chaperone J-domain superfamily	GENE3D	1.10.287.110	DnaJ domain	coord: 58..163 e-value: 1.3E-22 score: 82.0
IPR036869	Chaperone J-domain superfamily	SUPERFAMILY	46565	Chaperone J-domain	coord: 69..140
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 173..206
None	No IPR available	PANTHER	PTHR45090:SF4	CHAPERONE PROTEIN DNAJ 20, CHLOROPLASTIC	coord: 9..199
None	No IPR available	PANTHER	PTHR45090	CHAPERONE PROTEIN DNAJ 20 CHLOROPLASTIC	coord: 9..199
IPR018253	DnaJ domain, conserved site	PROSITE	PS00636	DNAJ_1	coord: 114..133

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
CmoCh08G009710.1	CmoCh08G009710.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0061077	chaperone-mediated protein folding
cellular_component	GO:0009507	chloroplast