CmoCh08G009050 (gene) Cucurbita moschata (Rifu) v1

Overview
NameCmoCh08G009050
Typegene
OrganismCucurbita moschata (Cucurbita moschata (Rifu) v1)
DescriptionUbiquitin-related modifier 1 homolog
LocationCmo_Chr08: 5893941 .. 5896209 (-)
RNA-Seq ExpressionCmoCh08G009050
SyntenyCmoCh08G009050
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonfive_prime_UTRpolypeptideCDSthree_prime_UTR
Hold the cursor over a type above to highlight its positions in the sequence below.
CTTCTCTGTAGGGTTTTAGGGTTCCGGTGAAGAAAATTGAAAATGCAACTAACCCTTGAATTTGGGTAAGTCTCTCTCTCTCTCTCTCTCTCTCTAAGGAAATTTTCCCAGTTGTTTGTTTAGTGAGATACAGGAGAAAATTAGTGGTACTGGGTAGAAAATTTTAGTGGATTTTGTTTCCGGGAAAGTTGGAAATCATAAGATATATAAGATCGCGTTCTTTCGTGGTTTTACGTTTTTCGCAGCTCAAACTTGGATTGTTATAGCGTTGTTTATCTGTGAATATAGATTGTGTTCTCAATTTCGACAAACTCTCAAGTTCTTGATCGTAGTGTGTTTTTATGAGTCGTGATATTGGAACTAACTGAAAATTTTGCTTGAATCTCCAGTTGCTTCATTGCCTCCATATTGTAATCATTCTGGTTTTGTTCATTTTATTAACGTAGATTTGTTCATATTGTAATCATTCTGGTTTTGTGTTCAAGTTCTCTTTGTGTTTGATGTTGCTTTTAATTGGATTTGTATTTGTTTCTATAGCTGATGTAATTATCAGATGTAAAGTATGTTGGTTCAACAATTCATCAGTTTGTTTGATGGAAACTTTTGGTTTCGTTCATAGACTACACGGGTTTCGTATTGTCGACCTCATTCGTTCTTTCAATCTCCATCTCCCCATTGAAGCCGAAAAAAGAAGGAAAATAGACTGTGGGCATGTCTTGAGTAGCCTTTTCTGCAATATTAGGAATGATACTTTTATATGCTTCTAGGTTGTATTTTAATTGAACTTTTTTATGAATTTAGAGGGTGGGGAAATGATATGAGTGAAGATACATTTACAATGTAAATCAACATCAACCGACAATGTGCCTCTCCCTTCCGAATCCGAAGTGCGTTATGTGAGCTTTACAATCTGTCACATCTATGTACAGATCAATGGATTTTGGGAGGTGATTTTAATGTGATCAAATGGTCATTTGAGAAGTCAAATGGCAAACCAATTACGAAAAGAAATTCATATACAGGAGCATTCTGGTTGGCTCCCCTCTCGAACGAAAAATACACTTGGTCCAGCTTTTGTGGACAGCCTGCTATGACCCTTAAGGATCGTTTTTTAGTCTTTGGCCCTTGTATTGATAGATTCAACATTGCTTTGGGCAAGCGGGTTCCTCATATCACCTCTGATCATTATTTGATTCTCATGACCTTTGGACATCAAAGATGGGGCCTGAACATGTGGATGTGGCACCACTCCTTCGAGCCTTTGTTGAGACGAAAACAACAGCTGAGATATTATCCAAAGATGGCACTAGTTTGGTCTTGGATAGTGATAGTGAGTTCGAATTTATTGTATTTTTTACAGAAAGTTATACACCAAGGGTCGAGGTAGTAGACTTCCTCCAATCATTAGAAATCGGGATCGTCTTTTGTAACTTGTGGCGCCCTTTGCCTTTTAGTACATTTCATACTTGAAGTTACCATATTCTCATAGAAAAAAAAGTATGTCATTTGTTCGGTTCATATGATCGACATGACAGTAATATTAATGTTTAAATGCAGTGGGGGATTGGAGTTGCTATGTGACTCTGTGAAGATCCATAATATCAGCATCAATCCTGAAAATGGAGCGGGAAAGGTAAACCATATTTTCCAATAAGTTAATGAACGATTCTAGTCGAGATCATCAGATTCATATTTTCCTGTTTCTCCTTTCACGTCTCTGTTTATTTGTCTAATGTTTTCGTTTAAAACGCGTCTCAGTTGGTCATGAAAGATTTGCTCTCTTGGGTCCGTTCTAATCTGATCAAGGAGCGGCCGGAAATGTTTATGAAAGGCAACACCGTGTAAGTAAAAGAAACATCTCGTTTATGAAAGCCGAAACTTTTTGAAGAATTGTGAGTATTATTAAGGTTGTAGCTGACAGTGGCATGGTTTGGAATGTGGTGCAGAAGACCTGGTGTTCTGGTGCTTGTAAATGATTGTGATTGGGAGCTGAGCGGGCAGCTTGACACAACATTAGAAGAGAAAGACGTGGTTGTGTTCATATCCACCTTGCATGGAGGCTAACTTCATCAGGAATGTCTTTATCTGCTTCTATCTACTAAATACTTGTCTAAGATGATATGATATGGTACTTTAGGCCATTTTAACCTTAAAAATCTGCATTTTTCCCCGAAATTCGTCCGACCATATGATAATCAGATTTTGCACGATGTTGAATAACTGAATAAAAGTGGCTACTAATTACAAAAGTTAATGGTTCGATTTTCCA

mRNA sequence

CTTCTCTGTAGGGTTTTAGGGTTCCGGTGAAGAAAATTGAAAATGCAACTAACCCTTGAATTTGGTGGGGGATTGGAGTTGCTATGTGACTCTGTGAAGATCCATAATATCAGCATCAATCCTGAAAATGGAGCGGGAAAGTTGGTCATGAAAGATTTGCTCTCTTGGGTCCGTTCTAATCTGATCAAGGAGCGGCCGGAAATGTTTATGAAAGGCAACACCGTAAGACCTGGTGTTCTGGTGCTTGTAAATGATTGTGATTGGGAGCTGAGCGGGCAGCTTGACACAACATTAGAAGAGAAAGACGTGGTTGTGTTCATATCCACCTTGCATGGAGGCTAACTTCATCAGGAATGTCTTTATCTGCTTCTATCTACTAAATACTTGTCTAAGATGATATGATATGGTACTTTAGGCCATTTTAACCTTAAAAATCTGCATTTTTCCCCGAAATTCGTCCGACCATATGATAATCAGATTTTGCACGATGTTGAATAACTGAATAAAAGTGGCTACTAATTACAAAAGTTAATGGTTCGATTTTCCA

Coding sequence (CDS)

ATGCAACTAACCCTTGAATTTGGTGGGGGATTGGAGTTGCTATGTGACTCTGTGAAGATCCATAATATCAGCATCAATCCTGAAAATGGAGCGGGAAAGTTGGTCATGAAAGATTTGCTCTCTTGGGTCCGTTCTAATCTGATCAAGGAGCGGCCGGAAATGTTTATGAAAGGCAACACCGTAAGACCTGGTGTTCTGGTGCTTGTAAATGATTGTGATTGGGAGCTGAGCGGGCAGCTTGACACAACATTAGAAGAGAAAGACGTGGTTGTGTTCATATCCACCTTGCATGGAGGCTAA

Protein sequence

MQLTLEFGGGLELLCDSVKIHNISINPENGAGKLVMKDLLSWVRSNLIKERPEMFMKGNTVRPGVLVLVNDCDWELSGQLDTTLEEKDVVVFISTLHGG
Homology
[Close]
BLAST of CmoCh08G009050 vs. ExPASy Swiss-Prot
Match: B3H7G2 (Ubiquitin-related modifier 1 homolog 2 OS=Arabidopsis thaliana OX=3702 GN=URM1-2 PE=3 SV=1)

HSP 1 Score: 179.9 bits (455), Expect = 1.4e-44
Identity = 84/99 (84.85%), Postives = 91/99 (91.92%), Query Frame = 0 

Query: 1   MQLTLEFGGGLELLCDSVKIHNISINPENGAGKLVMKDLLSWVRSNLIKERPEMFMKGNT 60
           MQ TLEFGGGLELLCDSVKIH ++IN  N +  L MKDLLSWVR+NLIKERPEMFMKG+T
Sbjct: 1   MQFTLEFGGGLELLCDSVKIHKVNINLLNDSDILTMKDLLSWVRTNLIKERPEMFMKGDT 60

Query: 61  VRPGVLVLVNDCDWELSGQLDTTLEEKDVVVFISTLHGG 100
           VRPGVLVLVNDCDWELSGQLDTTLE+KDV+VFISTLHGG
Sbjct: 61  VRPGVLVLVNDCDWELSGQLDTTLEDKDVIVFISTLHGG 99

[Close]
BLAST of CmoCh08G009050 vs. ExPASy Swiss-Prot
Match: A0MDQ1 (Ubiquitin-related modifier 1 homolog 1 OS=Arabidopsis thaliana OX=3702 GN=URM1-1 PE=3 SV=2)

HSP 1 Score: 171.0 bits (432), Expect = 6.7e-42
Identity = 81/101 (80.20%), Postives = 89/101 (88.12%), Query Frame = 0 

Query: 1   MQLTLEFGGGLELLCDSVKIHNISINPENGAGK--LVMKDLLSWVRSNLIKERPEMFMKG 60
           MQLTLEFGGGLELLCDS KIH ++++  NGA      MK LLSWVR+NLIKERPEMFMKG
Sbjct: 1   MQLTLEFGGGLELLCDSEKIHKVNVDLPNGADSDDFTMKHLLSWVRTNLIKERPEMFMKG 60

Query: 61  NTVRPGVLVLVNDCDWELSGQLDTTLEEKDVVVFISTLHGG 100
           +TVRPGVLVLVNDCDWELSGQLDT +E+KDVVVFISTLHGG
Sbjct: 61  DTVRPGVLVLVNDCDWELSGQLDTVIEDKDVVVFISTLHGG 101

[Close]
BLAST of CmoCh08G009050 vs. ExPASy Swiss-Prot
Match: Q7GBC8 (Ubiquitin-related modifier 1 homolog OS=Oryza sativa subsp. indica OX=39946 GN=URM1 PE=3 SV=1)

HSP 1 Score: 160.6 bits (405), Expect = 9.0e-39
Identity = 74/100 (74.00%), Postives = 86/100 (86.00%), Query Frame = 0 

Query: 1   MQLTLEFGGGLELLCD-SVKIHNISINPENGAGKLVMKDLLSWVRSNLIKERPEMFMKGN 60
           M LTLEFGGGLELL + S K+H + + P +G GK+VMK LL+WV+SNLIKERPEMF+KG+
Sbjct: 1   MHLTLEFGGGLELLLEKSTKVHKVDLQPNDGDGKVVMKGLLAWVKSNLIKERPEMFLKGD 60

Query: 61  TVRPGVLVLVNDCDWELSGQLDTTLEEKDVVVFISTLHGG 100
           +VRPGVLVL+NDCDWEL G LD  LEEKDVVVFISTLHGG
Sbjct: 61  SVRPGVLVLINDCDWELCGGLDAELEEKDVVVFISTLHGG 100

[Close]
BLAST of CmoCh08G009050 vs. ExPASy Swiss-Prot
Match: Q0D6M1 (Ubiquitin-related modifier 1 homolog OS=Oryza sativa subsp. japonica OX=39947 GN=URM1 PE=3 SV=1)

HSP 1 Score: 160.6 bits (405), Expect = 9.0e-39
Identity = 74/100 (74.00%), Postives = 86/100 (86.00%), Query Frame = 0 

Query: 1   MQLTLEFGGGLELLCD-SVKIHNISINPENGAGKLVMKDLLSWVRSNLIKERPEMFMKGN 60
           M LTLEFGGGLELL + S K+H + + P +G GK+VMK LL+WV+SNLIKERPEMF+KG+
Sbjct: 1   MHLTLEFGGGLELLLEKSTKVHKVDLQPNDGDGKVVMKGLLAWVKSNLIKERPEMFLKGD 60

Query: 61  TVRPGVLVLVNDCDWELSGQLDTTLEEKDVVVFISTLHGG 100
           +VRPGVLVL+NDCDWEL G LD  LEEKDVVVFISTLHGG
Sbjct: 61  SVRPGVLVLINDCDWELCGGLDAELEEKDVVVFISTLHGG 100

[Close]
BLAST of CmoCh08G009050 vs. ExPASy Swiss-Prot
Match: B6SXH2 (Ubiquitin-related modifier 1 homolog OS=Zea mays OX=4577 GN=URM1 PE=3 SV=1)

HSP 1 Score: 152.1 bits (383), Expect = 3.2e-36
Identity = 72/101 (71.29%), Postives = 84/101 (83.17%), Query Frame = 0 

Query: 1   MQLTLEFGGGLELLCD-SVKIHNISI-NPENGAGKLVMKDLLSWVRSNLIKERPEMFMKG 60
           M LTLEFGGGLELL + S K+H + +  P++G GK+ MK LLSWV+ NLIKERPEMF+K 
Sbjct: 1   MHLTLEFGGGLELLLENSTKVHKVEVTTPKDGQGKVTMKFLLSWVKENLIKERPEMFLKA 60

Query: 61  NTVRPGVLVLVNDCDWELSGQLDTTLEEKDVVVFISTLHGG 100
           ++VRPGVLVL+NDCDWEL G LD  LEEKDVVVFISTLHGG
Sbjct: 61  DSVRPGVLVLINDCDWELCGGLDAELEEKDVVVFISTLHGG 101

[Close]
BLAST of CmoCh08G009050 vs. ExPASy TrEMBL
Match: A0A6J1HIP6 (Ubiquitin-related modifier 1 homolog OS=Cucurbita moschata OX=3662 GN=LOC111464389 PE=3 SV=1)

HSP 1 Score: 208.0 bits (528), Expect = 1.8e-50
Identity = 99/99 (100.00%), Postives = 99/99 (100.00%), Query Frame = 0 

Query: 1   MQLTLEFGGGLELLCDSVKIHNISINPENGAGKLVMKDLLSWVRSNLIKERPEMFMKGNT 60
           MQLTLEFGGGLELLCDSVKIHNISINPENGAGKLVMKDLLSWVRSNLIKERPEMFMKGNT
Sbjct: 1   MQLTLEFGGGLELLCDSVKIHNISINPENGAGKLVMKDLLSWVRSNLIKERPEMFMKGNT 60

Query: 61  VRPGVLVLVNDCDWELSGQLDTTLEEKDVVVFISTLHGG 100
           VRPGVLVLVNDCDWELSGQLDTTLEEKDVVVFISTLHGG
Sbjct: 61  VRPGVLVLVNDCDWELSGQLDTTLEEKDVVVFISTLHGG 99

[Close]
BLAST of CmoCh08G009050 vs. ExPASy TrEMBL
Match: A0A6J1KGQ8 (Ubiquitin-related modifier 1 homolog OS=Cucurbita maxima OX=3661 GN=LOC111494196 PE=3 SV=1)

HSP 1 Score: 204.1 bits (518), Expect = 2.6e-49
Identity = 96/99 (96.97%), Postives = 98/99 (98.99%), Query Frame = 0 

Query: 1   MQLTLEFGGGLELLCDSVKIHNISINPENGAGKLVMKDLLSWVRSNLIKERPEMFMKGNT 60
           MQLTLEFGGGLELLCDSVKIHN+SINPENG GKLVMKDLLSWVRSNLIKERPEMFMKG+T
Sbjct: 1   MQLTLEFGGGLELLCDSVKIHNVSINPENGVGKLVMKDLLSWVRSNLIKERPEMFMKGDT 60

Query: 61  VRPGVLVLVNDCDWELSGQLDTTLEEKDVVVFISTLHGG 100
           VRPGVLVLVNDCDWELSGQLDTTLEEKDVVVFISTLHGG
Sbjct: 61  VRPGVLVLVNDCDWELSGQLDTTLEEKDVVVFISTLHGG 99

[Close]
BLAST of CmoCh08G009050 vs. ExPASy TrEMBL
Match: A0A1S3CCC7 (Ubiquitin-related modifier 1 homolog OS=Cucumis melo OX=3656 GN=LOC103499050 PE=3 SV=1)

HSP 1 Score: 198.7 bits (504), Expect = 1.1e-47
Identity = 92/99 (92.93%), Postives = 98/99 (98.99%), Query Frame = 0 

Query: 1   MQLTLEFGGGLELLCDSVKIHNISINPENGAGKLVMKDLLSWVRSNLIKERPEMFMKGNT 60
           MQLTLEFGGGLELLC+SVKIHN+SI+PENG GKL+MKDLLSWVR+NLIKERPEMFMKG+T
Sbjct: 1   MQLTLEFGGGLELLCNSVKIHNVSIDPENGVGKLIMKDLLSWVRANLIKERPEMFMKGDT 60

Query: 61  VRPGVLVLVNDCDWELSGQLDTTLEEKDVVVFISTLHGG 100
           VRPGVLVLVNDCDWELSGQLDTTLEEKDVVVFISTLHGG
Sbjct: 61  VRPGVLVLVNDCDWELSGQLDTTLEEKDVVVFISTLHGG 99

[Close]
BLAST of CmoCh08G009050 vs. ExPASy TrEMBL
Match: A0A6J1KZL7 (Ubiquitin-related modifier 1 homolog OS=Cucurbita maxima OX=3661 GN=LOC111499031 PE=3 SV=1)

HSP 1 Score: 196.4 bits (498), Expect = 5.5e-47
Identity = 91/99 (91.92%), Postives = 97/99 (97.98%), Query Frame = 0 

Query: 1   MQLTLEFGGGLELLCDSVKIHNISINPENGAGKLVMKDLLSWVRSNLIKERPEMFMKGNT 60
           MQLTLEFGGGLELLCDSVKIH++S++PENGAG L+MKDLLSWVRSNLIKERPEMFMKG+T
Sbjct: 1   MQLTLEFGGGLELLCDSVKIHDVSVDPENGAGTLIMKDLLSWVRSNLIKERPEMFMKGDT 60

Query: 61  VRPGVLVLVNDCDWELSGQLDTTLEEKDVVVFISTLHGG 100
           VRPGVLVLVNDCDWELSGQLDT LEEKDVVVFISTLHGG
Sbjct: 61  VRPGVLVLVNDCDWELSGQLDTPLEEKDVVVFISTLHGG 99

[Close]
BLAST of CmoCh08G009050 vs. ExPASy TrEMBL
Match: A0A6J1H5M9 (Ubiquitin-related modifier 1 homolog OS=Cucurbita moschata OX=3662 GN=LOC111460265 PE=3 SV=1)

HSP 1 Score: 196.4 bits (498), Expect = 5.5e-47
Identity = 91/99 (91.92%), Postives = 97/99 (97.98%), Query Frame = 0 

Query: 1   MQLTLEFGGGLELLCDSVKIHNISINPENGAGKLVMKDLLSWVRSNLIKERPEMFMKGNT 60
           MQLTLEFGGGLELLCDSVKIH++S++PENGAG L+MKDLLSWVRSNLIKERPEMFMKG+T
Sbjct: 1   MQLTLEFGGGLELLCDSVKIHDVSVDPENGAGTLIMKDLLSWVRSNLIKERPEMFMKGDT 60

Query: 61  VRPGVLVLVNDCDWELSGQLDTTLEEKDVVVFISTLHGG 100
           VRPGVLVLVNDCDWELSGQLDT LEEKDVVVFISTLHGG
Sbjct: 61  VRPGVLVLVNDCDWELSGQLDTPLEEKDVVVFISTLHGG 99

[Close]
BLAST of CmoCh08G009050 vs. NCBI nr
Match: XP_022964356.1 (ubiquitin-related modifier 1 homolog 2 [Cucurbita moschata])

HSP 1 Score: 208.0 bits (528), Expect = 3.8e-50
Identity = 99/99 (100.00%), Postives = 99/99 (100.00%), Query Frame = 0 

Query: 1   MQLTLEFGGGLELLCDSVKIHNISINPENGAGKLVMKDLLSWVRSNLIKERPEMFMKGNT 60
           MQLTLEFGGGLELLCDSVKIHNISINPENGAGKLVMKDLLSWVRSNLIKERPEMFMKGNT
Sbjct: 1   MQLTLEFGGGLELLCDSVKIHNISINPENGAGKLVMKDLLSWVRSNLIKERPEMFMKGNT 60

Query: 61  VRPGVLVLVNDCDWELSGQLDTTLEEKDVVVFISTLHGG 100
           VRPGVLVLVNDCDWELSGQLDTTLEEKDVVVFISTLHGG
Sbjct: 61  VRPGVLVLVNDCDWELSGQLDTTLEEKDVVVFISTLHGG 99

[Close]
BLAST of CmoCh08G009050 vs. NCBI nr
Match: KAG6593693.1 (Ubiquitin-related modifier 1-like 2, partial [Cucurbita argyrosperma subsp. sororia])

HSP 1 Score: 205.7 bits (522), Expect = 1.9e-49
Identity = 97/99 (97.98%), Postives = 99/99 (100.00%), Query Frame = 0 

Query: 1   MQLTLEFGGGLELLCDSVKIHNISINPENGAGKLVMKDLLSWVRSNLIKERPEMFMKGNT 60
           MQLTLEFGGGLELLCDSVKIHN+SINPENGAGKLVMKDLLSWVRSNLIKERPEMFMKG+T
Sbjct: 1   MQLTLEFGGGLELLCDSVKIHNVSINPENGAGKLVMKDLLSWVRSNLIKERPEMFMKGDT 60

Query: 61  VRPGVLVLVNDCDWELSGQLDTTLEEKDVVVFISTLHGG 100
           VRPGVLVLVNDCDWELSGQLDTTLEEKDVVVFISTLHGG
Sbjct: 61  VRPGVLVLVNDCDWELSGQLDTTLEEKDVVVFISTLHGG 99

[Close]
BLAST of CmoCh08G009050 vs. NCBI nr
Match: XP_022999845.1 (ubiquitin-related modifier 1 homolog 2 [Cucurbita maxima])

HSP 1 Score: 204.1 bits (518), Expect = 5.4e-49
Identity = 96/99 (96.97%), Postives = 98/99 (98.99%), Query Frame = 0 

Query: 1   MQLTLEFGGGLELLCDSVKIHNISINPENGAGKLVMKDLLSWVRSNLIKERPEMFMKGNT 60
           MQLTLEFGGGLELLCDSVKIHN+SINPENG GKLVMKDLLSWVRSNLIKERPEMFMKG+T
Sbjct: 1   MQLTLEFGGGLELLCDSVKIHNVSINPENGVGKLVMKDLLSWVRSNLIKERPEMFMKGDT 60

Query: 61  VRPGVLVLVNDCDWELSGQLDTTLEEKDVVVFISTLHGG 100
           VRPGVLVLVNDCDWELSGQLDTTLEEKDVVVFISTLHGG
Sbjct: 61  VRPGVLVLVNDCDWELSGQLDTTLEEKDVVVFISTLHGG 99

[Close]
BLAST of CmoCh08G009050 vs. NCBI nr
Match: XP_023514461.1 (ubiquitin-related modifier 1 homolog 2 [Cucurbita pepo subsp. pepo])

HSP 1 Score: 202.6 bits (514), Expect = 1.6e-48
Identity = 96/99 (96.97%), Postives = 98/99 (98.99%), Query Frame = 0 

Query: 1   MQLTLEFGGGLELLCDSVKIHNISINPENGAGKLVMKDLLSWVRSNLIKERPEMFMKGNT 60
           MQLTLEFGGGLELLCDSVKIHN+SIN ENGAGKLVMKDLLSWVRSNLIKERPEMFMKG+T
Sbjct: 1   MQLTLEFGGGLELLCDSVKIHNVSINSENGAGKLVMKDLLSWVRSNLIKERPEMFMKGDT 60

Query: 61  VRPGVLVLVNDCDWELSGQLDTTLEEKDVVVFISTLHGG 100
           VRPGVLVLVNDCDWELSGQLDTTLEEKDVVVFISTLHGG
Sbjct: 61  VRPGVLVLVNDCDWELSGQLDTTLEEKDVVVFISTLHGG 99

[Close]
BLAST of CmoCh08G009050 vs. NCBI nr
Match: XP_038876423.1 (ubiquitin-related modifier 1 homolog 2 isoform X1 [Benincasa hispida])

HSP 1 Score: 200.7 bits (509), Expect = 6.0e-48
Identity = 93/99 (93.94%), Postives = 98/99 (98.99%), Query Frame = 0 

Query: 1   MQLTLEFGGGLELLCDSVKIHNISINPENGAGKLVMKDLLSWVRSNLIKERPEMFMKGNT 60
           MQLTLEFGGGLELLCDSVKIHN+SI+PENG GKL+MKDLLSWVR+NLIKERPEMFMKG+T
Sbjct: 1   MQLTLEFGGGLELLCDSVKIHNVSIDPENGVGKLIMKDLLSWVRTNLIKERPEMFMKGDT 60

Query: 61  VRPGVLVLVNDCDWELSGQLDTTLEEKDVVVFISTLHGG 100
           VRPGVLVLVNDCDWELSGQLDTTLEEKDVVVFISTLHGG
Sbjct: 61  VRPGVLVLVNDCDWELSGQLDTTLEEKDVVVFISTLHGG 99

[Close]
BLAST of CmoCh08G009050 vs. TAIR 10
Match: AT3G61113.1 (Ubiquitin related modifier 1 )

HSP 1 Score: 179.9 bits (455), Expect = 1.0e-45
Identity = 84/99 (84.85%), Postives = 91/99 (91.92%), Query Frame = 0 

Query: 1   MQLTLEFGGGLELLCDSVKIHNISINPENGAGKLVMKDLLSWVRSNLIKERPEMFMKGNT 60
           MQ TLEFGGGLELLCDSVKIH ++IN  N +  L MKDLLSWVR+NLIKERPEMFMKG+T
Sbjct: 1   MQFTLEFGGGLELLCDSVKIHKVNINLLNDSDILTMKDLLSWVRTNLIKERPEMFMKGDT 60

Query: 61  VRPGVLVLVNDCDWELSGQLDTTLEEKDVVVFISTLHGG 100
           VRPGVLVLVNDCDWELSGQLDTTLE+KDV+VFISTLHGG
Sbjct: 61  VRPGVLVLVNDCDWELSGQLDTTLEDKDVIVFISTLHGG 99

[Close]
BLAST of CmoCh08G009050 vs. TAIR 10
Match: AT2G45695.1 (Ubiquitin related modifier 1 )

HSP 1 Score: 171.0 bits (432), Expect = 4.7e-43
Identity = 81/101 (80.20%), Postives = 89/101 (88.12%), Query Frame = 0 

Query: 1   MQLTLEFGGGLELLCDSVKIHNISINPENGAGK--LVMKDLLSWVRSNLIKERPEMFMKG 60
           MQLTLEFGGGLELLCDS KIH ++++  NGA      MK LLSWVR+NLIKERPEMFMKG
Sbjct: 1   MQLTLEFGGGLELLCDSEKIHKVNVDLPNGADSDDFTMKHLLSWVRTNLIKERPEMFMKG 60

Query: 61  NTVRPGVLVLVNDCDWELSGQLDTTLEEKDVVVFISTLHGG 100
           +TVRPGVLVLVNDCDWELSGQLDT +E+KDVVVFISTLHGG
Sbjct: 61  DTVRPGVLVLVNDCDWELSGQLDTVIEDKDVVVFISTLHGG 101

The following BLAST results are available for this feature:
BLAST of CmoCh08G009050 vs. ExPASy Swiss-Prot
Match NameE-valueIdentityDescription
B3H7G21.4e-4484.85Ubiquitin-related modifier 1 homolog 2 OS=Arabidopsis thaliana OX=3702 GN=URM1-2... [more]
A0MDQ16.7e-4280.20Ubiquitin-related modifier 1 homolog 1 OS=Arabidopsis thaliana OX=3702 GN=URM1-1... [more]
Q7GBC89.0e-3974.00Ubiquitin-related modifier 1 homolog OS=Oryza sativa subsp. indica OX=39946 GN=U... [more]
Q0D6M19.0e-3974.00Ubiquitin-related modifier 1 homolog OS=Oryza sativa subsp. japonica OX=39947 GN... [more]
B6SXH23.2e-3671.29Ubiquitin-related modifier 1 homolog OS=Zea mays OX=4577 GN=URM1 PE=3 SV=1[more]
BLAST of CmoCh08G009050 vs. ExPASy TrEMBL
Match NameE-valueIdentityDescription
A0A6J1HIP61.8e-50100.00Ubiquitin-related modifier 1 homolog OS=Cucurbita moschata OX=3662 GN=LOC1114643... [more]
A0A6J1KGQ82.6e-4996.97Ubiquitin-related modifier 1 homolog OS=Cucurbita maxima OX=3661 GN=LOC111494196... [more]
A0A1S3CCC71.1e-4792.93Ubiquitin-related modifier 1 homolog OS=Cucumis melo OX=3656 GN=LOC103499050 PE=... [more]
A0A6J1KZL75.5e-4791.92Ubiquitin-related modifier 1 homolog OS=Cucurbita maxima OX=3661 GN=LOC111499031... [more]
A0A6J1H5M95.5e-4791.92Ubiquitin-related modifier 1 homolog OS=Cucurbita moschata OX=3662 GN=LOC1114602... [more]
BLAST of CmoCh08G009050 vs. NCBI nr
Match NameE-valueIdentityDescription
XP_022964356.13.8e-50100.00ubiquitin-related modifier 1 homolog 2 [Cucurbita moschata][more]
KAG6593693.11.9e-4997.98Ubiquitin-related modifier 1-like 2, partial [Cucurbita argyrosperma subsp. soro... [more]
XP_022999845.15.4e-4996.97ubiquitin-related modifier 1 homolog 2 [Cucurbita maxima][more]
XP_023514461.11.6e-4896.97ubiquitin-related modifier 1 homolog 2 [Cucurbita pepo subsp. pepo][more]
XP_038876423.16.0e-4893.94ubiquitin-related modifier 1 homolog 2 isoform X1 [Benincasa hispida][more]
BLAST of CmoCh08G009050 vs. TAIR 10
Match NameE-valueIdentityDescription
AT3G61113.11.0e-4584.85Ubiquitin related modifier 1 [more]
AT2G45695.14.7e-4380.20Ubiquitin related modifier 1 [more]
InterPro
Analysis Name: InterPro Annotations of Cucurbita moschata (Rifu) v1
Date Performed: 2021-10-25
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR012675Beta-grasp domain superfamilyGENE3D3.10.20.30coord: 1..99
e-value: 1.5E-37
score: 129.9
IPR015221Ubiquitin-related modifier 1PFAMPF09138Urm1coord: 3..99
e-value: 2.6E-35
score: 120.7
IPR015221Ubiquitin-related modifier 1PIRSFPIRSF037379Urm1coord: 1..99
e-value: 1.2E-38
score: 129.4
IPR015221Ubiquitin-related modifier 1PANTHERPTHR14986RURM1 PROTEINcoord: 1..99
IPR015221Ubiquitin-related modifier 1HAMAPMF_03048Urm1coord: 1..99
score: 34.387688
IPR015221Ubiquitin-related modifier 1CDDcd01764Ubl_Urm1coord: 3..99
e-value: 6.43854E-48
score: 145.747
IPR016155Molybdopterin synthase/thiamin biosynthesis sulphur carrier, beta-graspSUPERFAMILY54285MoaD/ThiScoord: 1..99

Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
CmoCh08G009050.1CmoCh08G009050.1mRNA


GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0032447 protein urmylation
biological_process GO:0034227 tRNA thio-modification
biological_process GO:0002098 tRNA wobble uridine modification
cellular_component GO:0005829 cytosol
cellular_component GO:0005634 nucleus
cellular_component GO:0005737 cytoplasm
molecular_function GO:0031386 protein tag