CmoCh08G008330 (gene) Cucurbita moschata (Rifu) v1
Overview
Sequences
The following sequences are available for this feature:
Legend: exonfive_prime_UTRCDSpolypeptidethree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below.TTTTTTTTTTTTTTTTTTTTTTTTGGATCTGAATTTTTGTTCTTCCCCTCTGCTTCAGCCATTGGTGAGAGTGAGAAATTTGTTAATTTTAATTTTTATTGTTATTAAAATAAGGGAAGTGATTTTTTATGTGAAAATTATGCGTTTTTTTTTTTTTTTTTTTTTTTNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNGTTTTTTTTTTTTTTTTTTTTTTTTTTTGGATCTGAATTTTTGTTCTTCCCCTCTGCTTCAGCCATTGGTGAGAGTGAGAAATTTGTTAATTTTAATTTTTATTGTTATTAAAATAAGGGAAGTGATTTTTTATGTGAAAATTATGCGTTTTTTTTTTTTTTTTTTTTTTTATAAATTTTCTCCGACATTGCAGGTACTTTGCCTCGAAATTTTAAAAGAAAATGTTGGAATATGAATGGGGATCAACGAACGCGCCGCCGATTCTTCTCCCCGGCGACGAATCCGAACCCGCTTTCAACCCGGAAGCGCCTCACTCTCACCATTTACCCACTTTCATCGACCATCACCACCACAACACTTTCTTCCCGACTCTGACTCCGCCGCCGTTCACTACCCACTTCGGCGGGTTCGACGACCACCCACATAGCTTCATAATGGGTCCTTCTCATCATTACGATACTGTGGCCGACGCCGTCCATGGCGGAGGTGTCGGAGGGGAGGAGTTTGTGGTGGTGCCCAAGAGTGAGGAGGTTTGTCGGAGTATAACGGCGGTTCCTGTAGATTTCGCGGCGAGGATAGGGCTAAATTTAGGGGGGAGAACCTATTTCTCGTCTGAGGAGGAGGAGTTCGTGAATCAATTGTACCGGAGAGCGAGAACCGGTGGCGAACCGGGTTCGGGGAACTGGTCGGCTCGGTGCCAAGCGGAGGGGTGTAATGCGGATCTGAGCCAAGCCAAACAATACCACCGACGGCATAAAGTTTGTGAGTTTCATTCTAAAGCTTCCACCGTCATCACCGCCGGGTTGACTCAGAGGTTCTGTCAGCAATGCAGCAGGTTCGTTCCCCCTTCCTTCTAAAATTCCTAAACTACCCTCGTAGTCTGTCATTTCAAAATCTCTCCGTAAACATTTAGCGTTATGATCGTTTGGTTAATTAAAAATTATGTTATCGAAATACGTCCGAATTAAACCGAGATGAAATAGTACACGGAGCTTTAATGTGTAGCTACTCCGACATTAAAATTAGTTGAATTAATCTTTCATTATAGTACCTAGGCTTCCAACTACTTAAATATTTCACCCAACTTAGTGAGTCAAGTGTGTAAAATGACATGAATACCCTTGTTAGAGGTCAATCATTGGTTGGCCGTATTGTGGAGTAAATCCCGAGGGTAATTCCGTCCGTAGGAAAAAATTCCTGTAGTTTTCAGGTTTGACGGTGGCTCTAGACTTGCCCCCCTTCACAAAAGACCTAGAGCCACTTTCCAGAGATAGCTGCACATGTGCCCAAAATACCGAAAATACCCTCGCGATACCAAAATAATGATTGGCCTTCCGTACAAAGAAAAAAAGAAACCCGGAGGGCATTTTCGTACCCCGATTTTATTTTTGGTTTAATAAAATGTGTGTGTTTGGAATGAAGAACCAAACATAGGTCAAAGTCAAAGGTTAGAAGCGGGGCCCACGTCCATTATTGTAATAATAATATACATGAAAAACTATGTATATTATGTGTATGATAATATTGAAAAATGGATGGTGGAGGGTTTGTTACAGGTTTCATGTGCTGGCCGAGTTTGATAACGGAAAACGGAGTTGTCGGAAGAGGTTGGCGGATCACAACCGTCGACGGCGGAAGACACAACAAATTTCCAATCAAGGAAGCCCCAAGACGCAGCGCCTTCAAACTACTACTACTACTACTTCTTCAACCGAACAGTCGGCGTGGTCGGTGACCGTGGCAGTGTCTCCGGCGAAGATGTCGTTGGAGTGCCTTAACCAACGCCCATATTAGACAACGAATTTAATGATATTAATATGTGTATTGTGTAGGTAGCTTTTATCTTAACCTTCTTTATTTTAGTTTTAATAAGAATACATTTTGTGTAATATTATGAATTTCATTTAGTAGTAGTAGTGATGCTCTCATTTGGGTGTGCAACTATGGG TTTTTTTTTTTTTTTTTTTTTTTTGGATCTGAATTTTTGTTCTTCCCCTCTGCTTCAGCCATTGGTACTTTGCCTCGAAATTTTAAAAGAAAATGTTGGAATATGAATGGGGATCAACGAACGCGCCGCCGATTCTTCTCCCCGGCGACGAATCCGAACCCGCTTTCAACCCGGAAGCGCCTCACTCTCACCATTTACCCACTTTCATCGACCATCACCACCACAACACTTTCTTCCCGACTCTGACTCCGCCGCCGTTCACTACCCACTTCGGCGGGTTCGACGACCACCCACATAGCTTCATAATGGGTCCTTCTCATCATTACGATACTGTGGCCGACGCCGTCCATGGCGGAGGTGTCGGAGGGGAGGAGTTTGTGGTGGTGCCCAAGAGTGAGGAGGTTTGTCGGAGTATAACGGCGGTTCCTGTAGATTTCGCGGCGAGGATAGGGCTAAATTTAGGGGGGAGAACCTATTTCTCGTCTGAGGAGGAGGAGTTCGTGAATCAATTGTACCGGAGAGCGAGAACCGGTGGCGAACCGGGTTCGGGGAACTGGTCGGCTCGGTGCCAAGCGGAGGGGTGTAATGCGGATCTGAGCCAAGCCAAACAATACCACCGACGGCATAAAGTTTGTGAGTTTCATTCTAAAGCTTCCACCGTCATCACCGCCGGGTTGACTCAGAGGTTCTGTCAGCAATGCAGCAGGTTTCATGTGCTGGCCGAGTTTGATAACGGAAAACGGAGTTGTCGGAAGAGGTTGGCGGATCACAACCGTCGACGGCGGAAGACACAACAAATTTCCAATCAAGGAAGCCCCAAGACGCAGCGCCTTCAAACTACTACTACTACTACTTCTTCAACCGAACAGTCGGCGTGGTCGGTGACCGTGGCAGTGTCTCCGGCGAAGATGTCGTTGGAGTGCCTTAACCAACGCCCATATTAGACAACGAATTTAATGATATTAATATGTGTATTGTGTAGGTAGCTTTTATCTTAACCTTCTTTATTTTAGTTTTAATAAGAATACATTTTGTGTAATATTATGAATTTCATTTAGTAGTAGTAGTGATGCTCTCATTTGGGTGTGCAACTATGGG ATGTTGGAATATGAATGGGGATCAACGAACGCGCCGCCGATTCTTCTCCCCGGCGACGAATCCGAACCCGCTTTCAACCCGGAAGCGCCTCACTCTCACCATTTACCCACTTTCATCGACCATCACCACCACAACACTTTCTTCCCGACTCTGACTCCGCCGCCGTTCACTACCCACTTCGGCGGGTTCGACGACCACCCACATAGCTTCATAATGGGTCCTTCTCATCATTACGATACTGTGGCCGACGCCGTCCATGGCGGAGGTGTCGGAGGGGAGGAGTTTGTGGTGGTGCCCAAGAGTGAGGAGGTTTGTCGGAGTATAACGGCGGTTCCTGTAGATTTCGCGGCGAGGATAGGGCTAAATTTAGGGGGGAGAACCTATTTCTCGTCTGAGGAGGAGGAGTTCGTGAATCAATTGTACCGGAGAGCGAGAACCGGTGGCGAACCGGGTTCGGGGAACTGGTCGGCTCGGTGCCAAGCGGAGGGGTGTAATGCGGATCTGAGCCAAGCCAAACAATACCACCGACGGCATAAAGTTTGTGAGTTTCATTCTAAAGCTTCCACCGTCATCACCGCCGGGTTGACTCAGAGGTTCTGTCAGCAATGCAGCAGGTTTCATGTGCTGGCCGAGTTTGATAACGGAAAACGGAGTTGTCGGAAGAGGTTGGCGGATCACAACCGTCGACGGCGGAAGACACAACAAATTTCCAATCAAGGAAGCCCCAAGACGCAGCGCCTTCAAACTACTACTACTACTACTTCTTCAACCGAACAGTCGGCGTGGTCGGTGACCGTGGCAGTGTCTCCGGCGAAGATGTCGTTGGAGTGCCTTAACCAACGCCCATATTAG MLEYEWGSTNAPPILLPGDESEPAFNPEAPHSHHLPTFIDHHHHNTFFPTLTPPPFTTHFGGFDDHPHSFIMGPSHHYDTVADAVHGGGVGGEEFVVVPKSEEVCRSITAVPVDFAARIGLNLGGRTYFSSEEEEFVNQLYRRARTGGEPGSGNWSARCQAEGCNADLSQAKQYHRRHKVCEFHSKASTVITAGLTQRFCQQCSRFHVLAEFDNGKRSCRKRLADHNRRRRKTQQISNQGSPKTQRLQTTTTTTSSTEQSAWSVTVAVSPAKMSLECLNQRPY Homology
BLAST of CmoCh08G008330 vs. ExPASy Swiss-Prot
Match: Q8GXL3 (Squamosa promoter-binding-like protein 8 OS=Arabidopsis thaliana OX=3702 GN=SPL8 PE=1 SV=2) HSP 1 Score: 212.2 bits (539), Expect = 7.5e-54 Identity = 147/331 (44.41%), Postives = 181/331 (54.68%), Query Frame = 0
BLAST of CmoCh08G008330 vs. ExPASy Swiss-Prot
Match: A2YFT9 (Squamosa promoter-binding-like protein 10 OS=Oryza sativa subsp. indica OX=39946 GN=SPL10 PE=2 SV=1) HSP 1 Score: 156.8 bits (395), Expect = 3.7e-37 Identity = 82/122 (67.21%), Postives = 90/122 (73.77%), Query Frame = 0
BLAST of CmoCh08G008330 vs. ExPASy Swiss-Prot
Match: Q0DAE8 (Squamosa promoter-binding-like protein 10 OS=Oryza sativa subsp. japonica OX=39947 GN=SPL10 PE=2 SV=1) HSP 1 Score: 156.8 bits (395), Expect = 3.7e-37 Identity = 82/122 (67.21%), Postives = 90/122 (73.77%), Query Frame = 0
BLAST of CmoCh08G008330 vs. ExPASy Swiss-Prot
Match: Q0E3F8 (Squamosa promoter-binding-like protein 5 OS=Oryza sativa subsp. japonica OX=39947 GN=SPL5 PE=2 SV=1) HSP 1 Score: 144.8 bits (364), Expect = 1.5e-33 Identity = 89/184 (48.37%), Postives = 105/184 (57.07%), Query Frame = 0
BLAST of CmoCh08G008330 vs. ExPASy Swiss-Prot
Match: Q01KM7 (Squamosa promoter-binding-like protein 8 OS=Oryza sativa subsp. indica OX=39946 GN=SPL8 PE=2 SV=1) HSP 1 Score: 133.3 bits (334), Expect = 4.4e-30 Identity = 107/292 (36.64%), Postives = 132/292 (45.21%), Query Frame = 0
BLAST of CmoCh08G008330 vs. ExPASy TrEMBL
Match: A0A6J1HM09 (squamosa promoter-binding-like protein 8 OS=Cucurbita moschata OX=3662 GN=LOC111464198 PE=4 SV=1) HSP 1 Score: 580.9 bits (1496), Expect = 3.0e-162 Identity = 283/283 (100.00%), Postives = 283/283 (100.00%), Query Frame = 0
BLAST of CmoCh08G008330 vs. ExPASy TrEMBL
Match: A0A6J1KHB5 (squamosa promoter-binding-like protein 8 OS=Cucurbita maxima OX=3661 GN=LOC111494369 PE=4 SV=1) HSP 1 Score: 554.7 bits (1428), Expect = 2.3e-154 Identity = 272/284 (95.77%), Postives = 275/284 (96.83%), Query Frame = 0
BLAST of CmoCh08G008330 vs. ExPASy TrEMBL
Match: A0A1S3C8D3 (squamosa promoter-binding-like protein 8 OS=Cucumis melo OX=3656 GN=LOC103497656 PE=4 SV=1) HSP 1 Score: 399.4 bits (1025), Expect = 1.2e-107 Identity = 209/305 (68.52%), Postives = 237/305 (77.70%), Query Frame = 0
BLAST of CmoCh08G008330 vs. ExPASy TrEMBL
Match: A0A0A0KA35 (SBP-type domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_6G109120 PE=4 SV=1) HSP 1 Score: 385.6 bits (989), Expect = 1.8e-103 Identity = 206/304 (67.76%), Postives = 231/304 (75.99%), Query Frame = 0
BLAST of CmoCh08G008330 vs. ExPASy TrEMBL
Match: A0A2I4HD80 (squamosa promoter-binding-like protein 8 OS=Juglans regia OX=51240 GN=LOC109016106 PE=4 SV=1) HSP 1 Score: 264.6 bits (675), Expect = 4.7e-67 Identity = 168/311 (54.02%), Postives = 196/311 (63.02%), Query Frame = 0
BLAST of CmoCh08G008330 vs. NCBI nr
Match: XP_022964056.1 (squamosa promoter-binding-like protein 8 [Cucurbita moschata] >XP_022964057.1 squamosa promoter-binding-like protein 8 [Cucurbita moschata] >XP_022964058.1 squamosa promoter-binding-like protein 8 [Cucurbita moschata] >XP_022964059.1 squamosa promoter-binding-like protein 8 [Cucurbita moschata]) HSP 1 Score: 580.9 bits (1496), Expect = 6.1e-162 Identity = 283/283 (100.00%), Postives = 283/283 (100.00%), Query Frame = 0
BLAST of CmoCh08G008330 vs. NCBI nr
Match: KAG6593615.1 (Squamosa promoter-binding-like protein 8, partial [Cucurbita argyrosperma subsp. sororia]) HSP 1 Score: 570.9 bits (1470), Expect = 6.3e-159 Identity = 281/285 (98.60%), Postives = 281/285 (98.60%), Query Frame = 0
BLAST of CmoCh08G008330 vs. NCBI nr
Match: KAG7025960.1 (Squamosa promoter-binding-like protein 8 [Cucurbita argyrosperma subsp. argyrosperma]) HSP 1 Score: 568.2 bits (1463), Expect = 4.1e-158 Identity = 279/284 (98.24%), Postives = 280/284 (98.59%), Query Frame = 0
BLAST of CmoCh08G008330 vs. NCBI nr
Match: XP_023513854.1 (squamosa promoter-binding-like protein 8 [Cucurbita pepo subsp. pepo] >XP_023513855.1 squamosa promoter-binding-like protein 8 [Cucurbita pepo subsp. pepo]) HSP 1 Score: 564.7 bits (1454), Expect = 4.5e-157 Identity = 277/283 (97.88%), Postives = 278/283 (98.23%), Query Frame = 0
BLAST of CmoCh08G008330 vs. NCBI nr
Match: XP_023000065.1 (squamosa promoter-binding-like protein 8 [Cucurbita maxima] >XP_023000066.1 squamosa promoter-binding-like protein 8 [Cucurbita maxima] >XP_023000067.1 squamosa promoter-binding-like protein 8 [Cucurbita maxima]) HSP 1 Score: 554.7 bits (1428), Expect = 4.7e-154 Identity = 272/284 (95.77%), Postives = 275/284 (96.83%), Query Frame = 0
BLAST of CmoCh08G008330 vs. TAIR 10
Match: AT1G02065.1 (squamosa promoter binding protein-like 8 ) HSP 1 Score: 212.2 bits (539), Expect = 5.3e-55 Identity = 147/331 (44.41%), Postives = 181/331 (54.68%), Query Frame = 0
BLAST of CmoCh08G008330 vs. TAIR 10
Match: AT1G02065.2 (squamosa promoter binding protein-like 8 ) HSP 1 Score: 158.3 bits (399), Expect = 9.1e-39 Identity = 109/254 (42.91%), Postives = 132/254 (51.97%), Query Frame = 0
BLAST of CmoCh08G008330 vs. TAIR 10
Match: AT3G60030.1 (squamosa promoter-binding protein-like 12 ) HSP 1 Score: 125.6 bits (314), Expect = 6.5e-29 Identity = 65/119 (54.62%), Postives = 79/119 (66.39%), Query Frame = 0
BLAST of CmoCh08G008330 vs. TAIR 10
Match: AT2G47070.1 (squamosa promoter binding protein-like 1 ) HSP 1 Score: 120.9 bits (302), Expect = 1.6e-27 Identity = 55/77 (71.43%), Postives = 62/77 (80.52%), Query Frame = 0
BLAST of CmoCh08G008330 vs. TAIR 10
Match: AT1G20980.1 (squamosa promoter binding protein-like 14 ) HSP 1 Score: 120.6 bits (301), Expect = 2.1e-27 Identity = 66/118 (55.93%), Postives = 75/118 (63.56%), Query Frame = 0
The following BLAST results are available for this feature:
InterPro
Analysis Name: InterPro Annotations of Cucurbita moschata (Rifu) v1
Date Performed: 2021-10-25
Relationships
The following mRNA feature(s) are a part of this gene:
GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
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