CmoCh08G007830 (gene) Cucurbita moschata (Rifu) v1

Overview


Name	CmoCh08G007830
Type	gene
Organism	Cucurbita moschata (Cucurbita moschata (Rifu) v1)
Description	oligouridylate-binding protein 1B-like
Location	Cmo_Chr08: 4938940 .. 4943534 (+)
RNA-Seq Expression	CmoCh08G007830
Synteny	CmoCh08G007830

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonfive_prime_UTRCDSpolypeptide

Hold the cursor over a type above to highlight its positions in the sequence below.

AGTACCCGCAATCGAATCCTCTTTCCCCCCAACCCCGAAAAGCCTTTCCCTCTCTAATTTTTCTCGCCTTTGTTCGACTCTTAACCCTAACCCCTCCTCTTCCCGGTAAAATTTTTCGTTAATTTTGACGGAAAATTGATCGAGGAAATAAGAATGCAACATCAGAGATTGAAGCAACAACAACAACAAGCTTTGATGCAGCAAGCTTTGCTTCAGCAACAATCTCTTTATCATCCTGGTCTTTTAGCTCCCCCTCAGGTTCGACTTCTTCTTTGTTTTTGTTTTCGTTCACATTTTTATGATCTACACCTTTTGTTTTGTTCAATTCTGCATGTTGTTTGTGTGTTTGGGTTGTCAATCTCGGAGATGTGTCTCTGAAGTTACGGCCGATTTGGTGCTTGCTGTTGTAGCGGTGTTTCGCTAATTGTGTATGGTTTTGAGTTGTGGATGCTTGAAGTTTTGTGATGGATATTGGAGTTTTTGTTTCTTTTTAGTTGTGGGTTTCTGCTGGGAAACCTTGAGCTCGTTTGGAATTTTTGTTTTTTGTTTTTTGTTTTTTTGTTCTTAATTAATGAAGACATAGGACCCATTTGTATGCTCAAGGGCAGTCAATGATGGTAGGATGTTCCATGCAGTGGTTCACTTCTGGGGCTTAAATTTTCCATTTGGTGTATATTCTGTCGATGCAAGATGTTTGTGTTGCATTTTTTATTTTCTATTTTTCAATTCGTTCTGGGGTGCAGGTAGATTATATTATTTTATTCATCACTTCCCATCCTTGTTGATGACAGCTGACTTATAATACTAGACTTGAAGTTACATACGATGTTGTGAAGTTTTGAGTGCTTGGTCGCTGGTCTGTCTTTCCTGATACTTTGATTGTTTTCTTTTTTCATACTTGTGTGGTCTCTGTCTCTTCAATGTACTGATTGAAATTCCATCGTGGTTCAGCCGTCGTTTTGTAACAAGATTTCTTTTAATTGGCATAATTGCTTTCTTTTTGTCCTCCACTCATTTCATAAAGGCACATTAGTTTCTTTCTTCCTTTTTATATCTTTTGTTGTTTCCATTGCACAGCTTGAACCAATTCCAAGTGGAAATTTACCCCCAGGCTTTGATCCAAGCACCTGCCGCAGTGTGTAAGTGATTTTCAAGGCGCTTTATCCCCTTAATGCCATCTCCTCTTTTTTGTCTGCATTATGAATCCTATGTTTGCTTGCAGTTCTCACGTCTCTCTATCACAGATTTGTTATTGACTGTCAAGTTCTCTTGCTTTTAGTATCTATTATTCCCAAGTCACTGGATGCCCAATTGTTTGATTTTCTGAACTTTTGCTTTAACATTATTTCTCAAATATCAATCAAGTTTCTAGGTGTTTTTATTTTATTTATTTATTTTTTATTATTTTTTTTTTTTTTATGTATACGTATATGACTGTAGTTGATTACTTATGTATCTTTTGTATTTTCTTTGTTTTCTTTTCCTTTTGAAAACTTTTAGTTTCTTTAATTTCGAGGAAATGCAGGTACGTGGGAAATATACATACACAAGTAACAGAGCCACTTCTTCAAGAGGTTTTCGGGAGTACAGGCCTTGTTGAAAACTGCAAGCTTGTCAGGAAGGAGAAGGTTGGTCCAACGGAGCTCATAAAACATTTTATATACCTCTCTCTCTCTCTTTTTATATATATATATTTTTTTCTTATAATAGGTTAAATCTAATTGTTTCTTTCCTTGTCTATTAACATCCTTGTTGCCACTGCTTTATGCAGTCATCCTATGGATTTATTCACTATTTTGATCGCAGATCGGCTGCTATGGCTATTTTGTCACTTAATGGGAGGCATTTGTAAGCATAAAACTAAATTTGGTATTTTCCATGCTTTGTACCTCTGTTTCTTCCCTTGATATGTGCTTTACAGGTTTGGGCAGCCTATCAAAGTAAATTGGGCTTATGCTAGTGGTCAAAGAGAGGATACATCAGGTTTTGGATCTGTTTTGAATTAATGGTTGTGAGTTGCCACTTCTTTATTAATTCCTTCTATATTCACCCGTTTTTTTTTTTTTTTTTTTGTGCACAGGTCATTTCAACATCTTTGTGGGTGATCTTAGTCCTGAAGTTACTGATTCTACTCTGTTTGCATGCTTCTCTGTATTCCCTAGCTGTTCGTAAGCTTCAGCTCCTGAAAACTAATTTTTATTTGATTGTTTCTTTGAATTTAAGTTAAGTTAGAGGAAAAGATCATGCTCTCATCCTGGGGGTGAGTAGTTTTTTGTTAATAATTTTTTGTTTTTAACCATCAATATCTGATATTATGTATAATTGGTTTCAGCGATGCGAGAGTTATGTGGGATCAGAAGACTGGGCGTTCAAGGGGATTTGGTTTTGTTTCCTTTCGCAACCAACAGGTTCAAGCTACATCTACTTCAAATATGTTATTTTCTATTATTTCTCTTTTCGTTACTAAATTATGCTCCCTTTCCAGGATGCTCAAAGTGCAATAAATGACCTGACTGGTAAGGACTATGGTTTAAATTACCTTGTAGTAGATTGTCAATTGTAGACTAATTAGTTCACAACATTTGTAAGAAAGAATAGCTTGATGGTCTCTTCATCTGCTATTTCATTTAATTTTGTGGTATATTGTTATCGTGCATAACAACATGAAAGCAAGTAGTGTCTTGTCTTTGACCTTCGAAATTGACATCTTTCCAATAATTACTTTAATAATTGTAAGGGTCTTCTTACCATCTTTGCATCCTACTTCTCACTACATATGATCTGCTTCAGGTAAGTGGCTTGGAAGTCGACAGATTCGCTGCAACTGGGCTACCAAAGGTGCTGGATCCAATGAAGACAAGCAGAGCTCAGATGTTAAAAGCATTGCAGAACTTACGAATGGATCATCTGGTTAGTGTTCGTTCCAGAACATTAATGATGCTTTTCAATTCTTTCATTATAACCTACAAGTTTAGAATGTCTCACTTTTGTTGTTTTGTATTGAGAATTGATCCACCCCCCCCCCCCCCCCCNCCCCCCAAGCTTTTGACAATACTGCACGTATTTTGAAATTTCTGCAGAAGATGGTAAAGAGACGGTTAATAGTGATGCCCCGGAGAACAATCCTCAGTACACTACTGTTTATGTTGGCAATCTTGCTCCAGAGGCAAGATACCTCATCCTATCTAGAAGTTTAATCTTGCAGTGTTTATTTTGTTGTCTGATGTGGGTGATATTTAGGAGTTATTGCTCATCTGACAACTACTAGCTTTCTGGATTTTTGAATAATTGTTCCTTGTTTGTTTATACAGGCGACGCAGGTTGATCTTCATCGCCATTTTCATGCTCTTGGGGCTGGTGTGATTGAGGAGGTTCGCATCCAGCGCGATAAAGGTTTTGGTTTTGTTAGATATAGCACTCATGCTGAGGCAGCTTTGGCTATTCAGATGGGGAATACTCAGTCATTTCTTTGCGGAAAACAGATCAAGGTTTTGTTTTATGCTCATAATATCAAAGTTTCTATTCTTTCTATTGGAACAATAGCTGCTGCACATTTTTCATAGAGCTGCTAGCAACGACTGCATGTATGCTTGAATGTGCAAGACTAATTTATACAACGCTTGGTTGTATGTTTGCAGTGCTCTTGGGGAAGCAAACCAACTCCACCTGGAACTATCTCGAACCCACTTCCTCCGCCTGCAGCAGTTCCGATGCAGGGGCTGTCCGCAACTGACCTCTTAACATATGAGCGGCAACTGGCAATGAGCAAAATGGGGGGCGTCCATGCTCTTATGCACCACCCCCAGGCTCCACATCCTTTAAAGCAGGCAGCAGCCATGGGGATGGGTGGTGCTGCTGGCTCAAGTCAAGCCATCTATGATGGTGGGTTTCAGAACGTTGCTGCAGCTCAGCAGCTCATGTATTATCAGTAAGAGGCTGAGGAGGAGGAGAGATGTATACAAAATGGAGTGCTTGGTTGAATCTCATCTTTTTTTTCTTTTCTTTTCTTTTCTTTTCTTTTCTTTTCTTTTTTTCTTGTGGAGAGTTGTCTGATGAGCCTTAGTGTATGATCCTTTTTTACTTTTTAATTTGTGTTTGAGTTTTCAGTAGTGTTTATGGAAAGATGATATCATTGTGTACCCGAGTATCCTTGGTGGTGGTGGTGGTATTTAGGAGAGGACACACTAGTTGGGTATAGCCTTGGTATTCTAGTTTTTCTTTCTTTTTTTTTTCTTTCTTTCTCGTCTTCTCTATTTCCTCTTCCTTTTATGTGAAGATATGATGATGATGATGATTGTTTTGTGCCATTACACACAGACTGCAACAAAAGAACATGCAACTTCCTCACCCTTGCTGTTCAATGTTTATTATGCTGCCAAGTTGGTGCAGTTAAAATTGTATCTGAATTAAGGGGCGTGTATTCAACCTGACAATCTAGATTAACCCATCCCGATTTATAGGGGTTGGGTTGGATATGGGACAAAAAAAAAAAAAACTTGCAAAAATAATTTATTATATATATATATTAAGAAACTTAGAGTGTTCATTGATCGTAGTACTTCAGCTTTACTATAACTTGGGCACGACTCTACTAG

mRNA sequence

AGTACCCGCAATCGAATCCTCTTTCCCCCCAACCCCGAAAAGCCTTTCCCTCTCTAATTTTTCTCGCCTTTGTTCGACTCTTAACCCTAACCCCTCCTCTTCCCGGTAAAATTTTTCGTTAATTTTGACGGAAAATTGATCGAGGAAATAAGAATGCAACATCAGAGATTGAAGCAACAACAACAACAAGCTTTGATGCAGCAAGCTTTGCTTCAGCAACAATCTCTTTATCATCCTGGTCTTTTAGCTCCCCCTCAGCTTGAACCAATTCCAAGTGGAAATTTACCCCCAGGCTTTGATCCAAGCACCTGCCGCAGTGTGTACGTGGGAAATATACATACACAAGTAACAGAGCCACTTCTTCAAGAGGTTTTCGGGAGTACAGGCCTTGTTGAAAACTGCAAGCTTGTCAGGAAGGAGAAGTCATCCTATGGATTTATTCACTATTTTGATCGCAGATCGGCTGCTATGGCTATTTTGTCACTTAATGGGAGGCATTTGTTTGGGCAGCCTATCAAAGTAAATTGGGCTTATGCTAGTGGTCAAAGAGAGGATACATCAGGTCATTTCAACATCTTTGTGGGTGATCTTAGTCCTGAAGTTACTGATTCTACTCTGTTTGCATGCTTCTCTGTATTCCCTAGCTGTTCCGATGCGAGAGTTATGTGGGATCAGAAGACTGGGCGTTCAAGGGGATTTGGTTTTGTTTCCTTTCGCAACCAACAGGATGCTCAAAGTGCAATAAATGACCTGACTGGTAAGTGGCTTGGAAGTCGACAGATTCGCTGCAACTGGGCTACCAAAGGTGCTGGATCCAATGAAGACAAGCAGAGCTCAGATGTTAAAAGCATTGCAGAACTTACGAATGGATCATCTGAAGATGGTAAAGAGACGGTTAATAGTGATGCCCCGGAGAACAATCCTCAGTACACTACTGTTTATGTTGGCAATCTTGCTCCAGAGGCAAGATACCTCATCCTATCTAGAAGTTTAATCTTGCAGTGTTTATTTTGTTGTCTGATGTGGGCGACGCAGGTTGATCTTCATCGCCATTTTCATGCTCTTGGGGCTGGTGTGATTGAGGAGGTTCGCATCCAGCGCGATAAAGGTTTTGGTTTTGTTAGATATAGCACTCATGCTGAGGCAGCTTTGGCTATTCAGATGGGGAATACTCAGTCATTTCTTTGCGGAAAACAGATCAAGTGCTCTTGGGGAAGCAAACCAACTCCACCTGGAACTATCTCGAACCCACTTCCTCCGCCTGCAGCAGTTCCGATGCAGGGGCTGTCCGCAACTGACCTCTTAACATATGAGCGGCAACTGGCAATGAGCAAAATGGGGGGCGTCCATGCTCTTATGCACCACCCCCAGGCTCCACATCCTTTAAAGCAGGCAGCAGCCATGGGGATGGGTGGTGCTGCTGGCTCAAGTCAAGCCATCTATGATGGTGGGTTTCAGAACGTTGCTGCAGCTCAGCAGCTCATTAGTGTTTATGGAAAGATGATATCATTGTGTACCCGAGTATCCTTGGTGGTGGTGGTGTACTTCAGCTTTACTATAACTTGGGCACGACTCTACTAG

Coding sequence (CDS)

ATGCAACATCAGAGATTGAAGCAACAACAACAACAAGCTTTGATGCAGCAAGCTTTGCTTCAGCAACAATCTCTTTATCATCCTGGTCTTTTAGCTCCCCCTCAGCTTGAACCAATTCCAAGTGGAAATTTACCCCCAGGCTTTGATCCAAGCACCTGCCGCAGTGTGTACGTGGGAAATATACATACACAAGTAACAGAGCCACTTCTTCAAGAGGTTTTCGGGAGTACAGGCCTTGTTGAAAACTGCAAGCTTGTCAGGAAGGAGAAGTCATCCTATGGATTTATTCACTATTTTGATCGCAGATCGGCTGCTATGGCTATTTTGTCACTTAATGGGAGGCATTTGTTTGGGCAGCCTATCAAAGTAAATTGGGCTTATGCTAGTGGTCAAAGAGAGGATACATCAGGTCATTTCAACATCTTTGTGGGTGATCTTAGTCCTGAAGTTACTGATTCTACTCTGTTTGCATGCTTCTCTGTATTCCCTAGCTGTTCCGATGCGAGAGTTATGTGGGATCAGAAGACTGGGCGTTCAAGGGGATTTGGTTTTGTTTCCTTTCGCAACCAACAGGATGCTCAAAGTGCAATAAATGACCTGACTGGTAAGTGGCTTGGAAGTCGACAGATTCGCTGCAACTGGGCTACCAAAGGTGCTGGATCCAATGAAGACAAGCAGAGCTCAGATGTTAAAAGCATTGCAGAACTTACGAATGGATCATCTGAAGATGGTAAAGAGACGGTTAATAGTGATGCCCCGGAGAACAATCCTCAGTACACTACTGTTTATGTTGGCAATCTTGCTCCAGAGGCAAGATACCTCATCCTATCTAGAAGTTTAATCTTGCAGTGTTTATTTTGTTGTCTGATGTGGGCGACGCAGGTTGATCTTCATCGCCATTTTCATGCTCTTGGGGCTGGTGTGATTGAGGAGGTTCGCATCCAGCGCGATAAAGGTTTTGGTTTTGTTAGATATAGCACTCATGCTGAGGCAGCTTTGGCTATTCAGATGGGGAATACTCAGTCATTTCTTTGCGGAAAACAGATCAAGTGCTCTTGGGGAAGCAAACCAACTCCACCTGGAACTATCTCGAACCCACTTCCTCCGCCTGCAGCAGTTCCGATGCAGGGGCTGTCCGCAACTGACCTCTTAACATATGAGCGGCAACTGGCAATGAGCAAAATGGGGGGCGTCCATGCTCTTATGCACCACCCCCAGGCTCCACATCCTTTAAAGCAGGCAGCAGCCATGGGGATGGGTGGTGCTGCTGGCTCAAGTCAAGCCATCTATGATGGTGGGTTTCAGAACGTTGCTGCAGCTCAGCAGCTCATTAGTGTTTATGGAAAGATGATATCATTGTGTACCCGAGTATCCTTGGTGGTGGTGGTGTACTTCAGCTTTACTATAACTTGGGCACGACTCTACTAG

Protein sequence

MQHQRLKQQQQQALMQQALLQQQSLYHPGLLAPPQLEPIPSGNLPPGFDPSTCRSVYVGNIHTQVTEPLLQEVFGSTGLVENCKLVRKEKSSYGFIHYFDRRSAAMAILSLNGRHLFGQPIKVNWAYASGQREDTSGHFNIFVGDLSPEVTDSTLFACFSVFPSCSDARVMWDQKTGRSRGFGFVSFRNQQDAQSAINDLTGKWLGSRQIRCNWATKGAGSNEDKQSSDVKSIAELTNGSSEDGKETVNSDAPENNPQYTTVYVGNLAPEARYLILSRSLILQCLFCCLMWATQVDLHRHFHALGAGVIEEVRIQRDKGFGFVRYSTHAEAALAIQMGNTQSFLCGKQIKCSWGSKPTPPGTISNPLPPPAAVPMQGLSATDLLTYERQLAMSKMGGVHALMHHPQAPHPLKQAAAMGMGGAAGSSQAIYDGGFQNVAAAQQLISVYGKMISLCTRVSLVVVVYFSFTITWARLY

Homology

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BLAST of CmoCh08G007830 vs. ExPASy Swiss-Prot
Match: Q9LQI9 (Oligouridylate-binding protein 1B OS=Arabidopsis thaliana OX=3702 GN=UBP1B PE=1 SV=1)

HSP 1 Score: 686.8 bits (1771), Expect = 1.7e-196
Identity = 343/444 (77.25%), Postives = 377/444 (84.91%), Query Frame = 0


Query: 1   MQHQRLKQQQQQALMQQALLQQQSLYHPGLLAPPQLEPIPSGNLPPGFDPSTCRSVYVGN 60
           MQ  + +QQQQQ +MQQAL+QQQSLYHPGLLAPPQ+EPIPSGNLPPGFDPSTCRSVYVGN
Sbjct: 1   MQRLKQQQQQQQVMMQQALMQQQSLYHPGLLAPPQIEPIPSGNLPPGFDPSTCRSVYVGN 60

Query: 61  IHTQVTEPLLQEVFGSTGLVENCKLVRKEKSSYGFIHYFDRRSAAMAILSLNGRHLFGQP 120
           IH QVTEPLLQEVF  TG VE+CKL+RKEKSSYGF+HYFDRRSA +AILSLNGRHLFGQP
Sbjct: 61  IHIQVTEPLLQEVFAGTGPVESCKLIRKEKSSYGFVHYFDRRSAGLAILSLNGRHLFGQP 120

Query: 121 IKVNWAYASGQREDTSGHFNIFVGDLSPEVTDSTLFACFSVFPSCSDARVMWDQKTGRSR 180
           IKVNWAYASGQREDTS HFNIFVGDLSPEVTD+ LF CFSV+P+CSDARVMWDQKTGRSR
Sbjct: 121 IKVNWAYASGQREDTSSHFNIFVGDLSPEVTDAMLFTCFSVYPTCSDARVMWDQKTGRSR 180

Query: 181 GFGFVSFRNQQDAQSAINDLTGKWLGSRQIRCNWATKGAGSNEDKQSSDVKSIAELTNGS 240
           GFGFVSFRNQQDAQ+AI+++TGKWLGSRQIRCNWATKGA S EDKQSSD KS+ ELT+G 
Sbjct: 181 GFGFVSFRNQQDAQTAIDEITGKWLGSRQIRCNWATKGATSGEDKQSSDSKSVVELTSGV 240

Query: 241 SEDGKETVNSDAPENNPQYTTVYVGNLAPEARYLILSRSLILQCLFCCLMWATQVDLHRH 300
           SEDGK+T N +APENN QYTTVYVGNLAPE                      +QVDLHRH
Sbjct: 241 SEDGKDTTNGEAPENNAQYTTVYVGNLAPE---------------------VSQVDLHRH 300

Query: 301 FHALGAGVIEEVRIQRDKGFGFVRYSTHAEAALAIQMGNTQSFLCGKQIKCSWGSKPTPP 360
           FH+LGAGVIEEVR+QRDKGFGFVRYSTH EAALAIQMGNT S+L G+Q+KCSWGSKPTP 
Sbjct: 301 FHSLGAGVIEEVRVQRDKGFGFVRYSTHVEAALAIQMGNTHSYLSGRQMKCSWGSKPTPA 360

Query: 361 GTISNPLPPPAAVPMQGLSATDLLTYERQLAMSKMGGVHALMHHPQAPHPLKQAAAMGMG 420
           GT SNPLPPPA  P+ G SA+DLL YERQLAMSKM G++ +MHHPQ  H  KQAA     
Sbjct: 361 GTASNPLPPPAPAPIPGFSASDLLAYERQLAMSKMAGMNPMMHHPQGQHAFKQAAM---- 416

Query: 421 GAAGSSQAIYDGGFQNVAAAQQLI 445
           GA GS+QAIYDGG+QN   AQQL+
Sbjct: 421 GATGSNQAIYDGGYQN---AQQLM 416

[Close]

BLAST of CmoCh08G007830 vs. ExPASy Swiss-Prot
Match: Q9LJH8 (Oligouridylate-binding protein 1C OS=Arabidopsis thaliana OX=3702 GN=UBP1C PE=1 SV=1)

HSP 1 Score: 666.0 bits (1717), Expect = 3.2e-190
Identity = 341/449 (75.95%), Postives = 379/449 (84.41%), Query Frame = 0


Query: 1   MQHQRLK----QQQQQALM-QQALLQQQSLYHPGLLAPPQLEPIPSGNLPPGFDPSTCRS 60
           MQ+ RLK    QQQQQA+M QQAL+QQ SLYHPG+LAPPQLEP+PSGNLPPGFDPSTCRS
Sbjct: 1   MQNPRLKQHQQQQQQQAMMQQQALMQQHSLYHPGVLAPPQLEPVPSGNLPPGFDPSTCRS 60

Query: 61  VYVGNIHTQVTEPLLQEVFGSTGLVENCKLVRKEKSSYGFIHYFDRRSAAMAILSLNGRH 120
           VYVGNIHTQVTEPLLQE+F STG VE+ KL+RK+KSSYGF+HYFDRRSAA+AILSLNGRH
Sbjct: 61  VYVGNIHTQVTEPLLQEIFTSTGPVESSKLIRKDKSSYGFVHYFDRRSAALAILSLNGRH 120

Query: 121 LFGQPIKVNWAYASGQREDTSGHFNIFVGDLSPEVTDSTLFACFSVFPSCSDARVMWDQK 180
           LFGQPIKVNWAYA+GQREDTS HFNIFVGDLSPEVTD+TL+  FSVF SCSDARVMWDQK
Sbjct: 121 LFGQPIKVNWAYATGQREDTSSHFNIFVGDLSPEVTDATLYQSFSVFSSCSDARVMWDQK 180

Query: 181 TGRSRGFGFVSFRNQQDAQSAINDLTGKWLGSRQIRCNWATKGAGSNEDKQSSDVKSIAE 240
           TGRSRGFGFVSFRNQQDAQ+AIN++ GKWL SRQIRCNWATKGA S +DK SSD KS+ E
Sbjct: 181 TGRSRGFGFVSFRNQQDAQTAINEMNGKWLSSRQIRCNWATKGATSGDDKLSSDGKSVVE 240

Query: 241 LTNGSSEDGKETVNSDAPENNPQYTTVYVGNLAPEARYLILSRSLILQCLFCCLMWATQV 300
           LT GSSEDGKET+N + PENN Q+TTVYVGNLAPE                      TQ+
Sbjct: 241 LTTGSSEDGKETLNEETPENNSQFTTVYVGNLAPE---------------------VTQL 300

Query: 301 DLHRHFHALGAGVIEEVRIQRDKGFGFVRYSTHAEAALAIQMGNTQSFLCGKQIKCSWGS 360
           DLHR+FHALGAGVIEEVR+QRDKGFGFVRY+TH EAALAIQMGNTQ +L  +QIKCSWG+
Sbjct: 301 DLHRYFHALGAGVIEEVRVQRDKGFGFVRYNTHPEAALAIQMGNTQPYLFNRQIKCSWGN 360

Query: 361 KPTPPGTISNPLPPPAAVPMQGLSATDLLTYERQLAMSKMGGVHALMHHPQAPHPLKQAA 420
           KPTPPGT SNPLPPPA  P+ GLSA DLL YERQLA+SKM  V+ALMH  Q  HPL+QA 
Sbjct: 361 KPTPPGTASNPLPPPAPAPVPGLSAADLLNYERQLALSKMASVNALMHQ-QGQHPLRQAH 420

Query: 421 AMGMGGAAGSSQAIYDGGFQNVAAAQQLI 445
            +    AAG++ A+YDGGFQNVAAAQQL+
Sbjct: 421 GI---NAAGATAAMYDGGFQNVAAAQQLM 424

[Close]

BLAST of CmoCh08G007830 vs. ExPASy Swiss-Prot
Match: Q9SYG4 (Oligouridylate-binding protein 1A OS=Arabidopsis thaliana OX=3702 GN=UBP1A PE=1 SV=1)

HSP 1 Score: 619.8 bits (1597), Expect = 2.6e-176
Identity = 313/448 (69.87%), Postives = 361/448 (80.58%), Query Frame = 0


Query: 2   QHQRLKQQQQQALMQQALLQQQ-SLYHPGLLAPPQLEPIPSGNLPPGFDPSTCRSVYVGN 61
           Q Q+ +QQ QQA++QQA++QQ  SLYHPG++APPQ+EP+PSGNLPPGFDP+TCRSVY GN
Sbjct: 10  QQQQQQQQHQQAMIQQAMMQQHPSLYHPGVMAPPQMEPLPSGNLPPGFDPTTCRSVYAGN 69

Query: 62  IHTQVTEPLLQEVFGSTGLVENCKLVRKEKSSYGFIHYFDRRSAAMAILSLNGRHLFGQP 121
           IHTQVTE LLQE+F STG +E+CKL+RK+KSSYGF+HYFDRR A+MAI++LNGRH+FGQP
Sbjct: 70  IHTQVTEILLQEIFASTGPIESCKLIRKDKSSYGFVHYFDRRCASMAIMTLNGRHIFGQP 129

Query: 122 IKVNWAYASGQREDTSGHFNIFVGDLSPEVTDSTLFACFSVFPSCSDARVMWDQKTGRSR 181
           +KVNWAYA+GQREDTS HFNIFVGDLSPEVTD+ LF  FS F SCSDARVMWDQKTGRSR
Sbjct: 130 MKVNWAYATGQREDTSSHFNIFVGDLSPEVTDAALFDSFSAFNSCSDARVMWDQKTGRSR 189

Query: 182 GFGFVSFRNQQDAQSAINDLTGKWLGSRQIRCNWATKGAGSNEDKQSSDVKSIAELTNGS 241
           GFGFVSFRNQQDAQ+AIN++ GKW+ SRQIRCNWATKGA   EDK SSD KS+ ELTNGS
Sbjct: 190 GFGFVSFRNQQDAQTAINEMNGKWVSSRQIRCNWATKGATFGEDKHSSDGKSVVELTNGS 249

Query: 242 SEDGKETVNSDAPENNPQYTTVYVGNLAPEARYLILSRSLILQCLFCCLMWATQVDLHRH 301
           SEDG+E  N DAPENNPQ+TTVYVGNL+PE                      TQ+DLHR 
Sbjct: 250 SEDGRELSNEDAPENNPQFTTVYVGNLSPE---------------------VTQLDLHRL 309

Query: 302 FHALGAGVIEEVRIQRDKGFGFVRYSTHAEAALAIQMGNTQSFLCGKQIKCSWGSKPTPP 361
           F+ LGAGVIEEVR+QRDKGFGFVRY+TH EAALAIQMGN Q FL  +QI+CSWG+KPTP 
Sbjct: 310 FYTLGAGVIEEVRVQRDKGFGFVRYNTHDEAALAIQMGNAQPFLFSRQIRCSWGNKPTPS 369

Query: 362 GTISNPLPPPAAVPMQGLSATDLLTYERQLAMSKMGGVHALMHHPQAPHPLKQAAAMGMG 421
           GT SNPLPPPA   +  LSA DLL YERQLA++KM        HPQA H L+QA   G+G
Sbjct: 370 GTASNPLPPPAPASVPSLSAMDLLAYERQLALAKM--------HPQAQHSLRQA---GLG 425

Query: 422 -GAAGSSQAIYDGGFQNVAAAQQLISVY 448
              AG + A+YDGG+QNVAAA Q +  Y
Sbjct: 430 VNVAGGTAAMYDGGYQNVAAAHQQLMYY 425

[Close]

BLAST of CmoCh08G007830 vs. ExPASy Swiss-Prot
Match: Q9M427 (Oligouridylate-binding protein 1 OS=Nicotiana plumbaginifolia OX=4092 GN=UBP1 PE=2 SV=1)

HSP 1 Score: 604.0 bits (1556), Expect = 1.5e-171
Identity = 318/442 (71.95%), Postives = 351/442 (79.41%), Query Frame = 0


Query: 1   MQHQRLKQQQQQALMQQALLQQQSLYHPGLLAPPQLEPIPSGNLPPGFDPSTCRSVYVGN 60
           MQ QRLKQQQQQALM      QQSLYHPGLLAPPQ+EPI SGNLPPGFD STCRSVYVGN
Sbjct: 2   MQQQRLKQQQQQALM------QQSLYHPGLLAPPQIEPILSGNLPPGFDSSTCRSVYVGN 61

Query: 61  IHTQVTEPLLQEVFGSTGLVENCKLVRKEKSSYGFIHYFDRRSAAMAILSLNGRHLFGQP 120
           IH QVTEPLLQEVF STG +E CKL+RK+KSSYGF+ YFDRRSAA+AI++LNGRHLFGQP
Sbjct: 62  IHPQVTEPLLQEVFASTGPLEGCKLIRKDKSSYGFVDYFDRRSAALAIVTLNGRHLFGQP 121

Query: 121 IKVNWAYASGQREDTSGHFNIFVGDLSPEVTDSTLFACFSVFPSCSDARVMWDQKTGRSR 180
           IKVNWAYAS QREDTS H+NIFVGDLSPEVTD+TLFACFSV+ SCSDARVMWDQKTGRSR
Sbjct: 122 IKVNWAYASAQREDTSNHYNIFVGDLSPEVTDATLFACFSVYTSCSDARVMWDQKTGRSR 181

Query: 181 GFGFVSFRNQQDAQSAINDLTGKWLGSRQIRCNWATKGAGSNEDKQSSDVKSIAELTNGS 240
           GFGFVSFRNQQ+AQSAINDL GKWLGSRQIRCNWA KGAG+   +Q+SD KS+ ELT+G+
Sbjct: 182 GFGFVSFRNQQEAQSAINDLNGKWLGSRQIRCNWAAKGAGA-VGEQNSDAKSVVELTSGT 241

Query: 241 SEDGKE-TVNSDAPENNPQYTTVYVGNLAPEARYLILSRSLILQCLFCCLMWATQVDLHR 300
           S+DG+E  VN DAPENNPQYTTVYVGNLAPE                      T VDLHR
Sbjct: 242 SDDGQEKVVNEDAPENNPQYTTVYVGNLAPE---------------------VTSVDLHR 301

Query: 301 HFHALGAGVIEEVRIQRDKGFGFVRYSTHAEAALAIQMGNTQSFLCGKQIKCSWGSKPTP 360
           HFHALGAGVIE+VRIQRDKGFGFVRYS+HAEAA AIQ+GN +  L GK +KCSWGSKPTP
Sbjct: 302 HFHALGAGVIEDVRIQRDKGFGFVRYSSHAEAARAIQLGNAR-LLFGKPVKCSWGSKPTP 361

Query: 361 PGTISNPLPPPAAVPMQGLSATDLLTYERQLAMSKMGGVHALMHHPQAPHPLKQAAAMGM 420
           PG+ SNPLPPPA   + GLSA DL  Y+RQLA++KM G  A M  PQ             
Sbjct: 362 PGSSSNPLPPPAIGQIPGLSAMDLAAYQRQLALAKMAGAQAFM-QPQGQRI--------- 401

Query: 421 GGAAGSSQAIYDGGFQNVAAAQ 442
            GA G  Q IYDGG+  +A+ Q
Sbjct: 422 -GAPG--QGIYDGGYGGIASTQ 401

[Close]

BLAST of CmoCh08G007830 vs. ExPASy Swiss-Prot
Match: Q6YZW2 (RNA-binding protein 208 OS=Oryza sativa subsp. japonica OX=39947 GN=RBP-208 PE=1 SV=1)

HSP 1 Score: 491.9 bits (1265), Expect = 8.2e-138
Identity = 273/463 (58.96%), Postives = 326/463 (70.41%), Query Frame = 0


Query: 2   QHQRLK-QQQQQALMQQALLQQQSLYHPGLLAP------PQLEPIPSGNLPPGFDPSTCR 61
           Q QRL+ QQQQQAL+ Q  LQQQ  Y  G+LA        Q+EPI +GNLPPGFDPSTCR
Sbjct: 14  QQQRLRQQQQQQALLMQQALQQQQQYQSGVLAAAAAAAMTQMEPISNGNLPPGFDPSTCR 73

Query: 62  SVYVGNIHTQVTEPLLQEVFGSTGLVENCKLVRKEKSSYGFIHYFDRRSAAMAILSLNGR 121
           SVYVGN+H  VTE LL EVF S+GLVE CKL+RKEKSS+GF+ Y+DRRSAA+AI++L+GR
Sbjct: 74  SVYVGNVHPNVTESLLIEVFQSSGLVERCKLIRKEKSSFGFVDYYDRRSAALAIMTLHGR 133

Query: 122 HLFGQPIKVNWAYASGQREDTSGHFNIFVGDLSPEVTDSTLFACFSVFPSCSDARVMWDQ 181
           H+ GQ IKVNWAYAS QREDTSGHF+IFVGDLS EV D+TL+ACFS +PSCSDARVMWD 
Sbjct: 134 HICGQAIKVNWAYASTQREDTSGHFHIFVGDLSSEVNDATLYACFSAYPSCSDARVMWDN 193

Query: 182 KTGRSRGFGFVSFRNQQDAQSAINDLTGKWLGSRQIRCNWATKGAGSNEDKQSSDVKSIA 241
           KTGRSRG+GFVSFRNQQ+A++AI ++TGKWLGSRQIRCNWATK   + E+KQ +D  +  
Sbjct: 194 KTGRSRGYGFVSFRNQQEAETAITEMTGKWLGSRQIRCNWATK--NNAEEKQETDNHNAV 253

Query: 242 ELTNGSS-----EDGKETVNSDAPENNPQYTTVYVGNLAPEARYLILSRSLILQCLFCCL 301
            LTNGSS     E  ++T + + PENNP  TTVYVGNL  E                   
Sbjct: 254 VLTNGSSSNPGMEASQDTGSKENPENNPDCTTVYVGNLGHE------------------- 313

Query: 302 MWATQVDLHRHFHALGAGVIEEVRIQRDKGFGFVRYSTHAEAALAIQMGNTQSFLCGKQI 361
               + +LHRHF+ LG G IEEVR+Q+DKGFGFVRYS H EAALAIQM N    + GK I
Sbjct: 314 --VNRDELHRHFYNLGVGAIEEVRVQQDKGFGFVRYSNHGEAALAIQMAN-GLVVRGKPI 373

Query: 362 KCSWGSKPTPPGTISNPLPPP----AAVPM----QGLSATDLLTYERQLAMSKMGGVHAL 421
           KCSWG+KPTPPGT S PLPPP      VPM    QG SA D++ Y+RQL +S++      
Sbjct: 374 KCSWGNKPTPPGTSSKPLPPPLPSYQPVPMAGVPQGFSAADIVAYQRQLTLSQVAAGQIA 433

Query: 422 MHHPQAPHPLKQAAAMGMGGAAGSSQAIYDGGFQNVAAAQQLI 445
             H         A  +  G  A  SQA+YD G+ N ++AQQL+
Sbjct: 434 GQH-------GLAGQVSAGLLAAGSQALYD-GYPNQSSAQQLM 444

[Close]

BLAST of CmoCh08G007830 vs. ExPASy TrEMBL
Match: A0A6J1HJ29 (oligouridylate-binding protein 1B-like OS=Cucurbita moschata OX=3662 GN=LOC111464510 PE=4 SV=1)

HSP 1 Score: 833.2 bits (2151), Expect = 5.5e-238
Identity = 422/444 (95.05%), Postives = 423/444 (95.27%), Query Frame = 0


Query: 1   MQHQRLKQQQQQALMQQALLQQQSLYHPGLLAPPQLEPIPSGNLPPGFDPSTCRSVYVGN 60
           MQHQRLKQQQQQALMQQALLQQQSLYHPGLLAPPQLEPIPSGNLPPGFDPSTCRSVYVGN
Sbjct: 1   MQHQRLKQQQQQALMQQALLQQQSLYHPGLLAPPQLEPIPSGNLPPGFDPSTCRSVYVGN 60

Query: 61  IHTQVTEPLLQEVFGSTGLVENCKLVRKEKSSYGFIHYFDRRSAAMAILSLNGRHLFGQP 120
           IHTQVTEPLLQEVFGSTGLVENCKLVRKEKSSYGFIHYFDRRSAAMAILSLNGRHLFGQP
Sbjct: 61  IHTQVTEPLLQEVFGSTGLVENCKLVRKEKSSYGFIHYFDRRSAAMAILSLNGRHLFGQP 120

Query: 121 IKVNWAYASGQREDTSGHFNIFVGDLSPEVTDSTLFACFSVFPSCSDARVMWDQKTGRSR 180
           IKVNWAYASGQREDTSGHFNIFVGDLSPEVTDSTLFACFSVFPSCSDARVMWDQKTGRSR
Sbjct: 121 IKVNWAYASGQREDTSGHFNIFVGDLSPEVTDSTLFACFSVFPSCSDARVMWDQKTGRSR 180

Query: 181 GFGFVSFRNQQDAQSAINDLTGKWLGSRQIRCNWATKGAGSNEDKQSSDVKSIAELTNGS 240
           GFGFVSFRNQQDAQSAINDLTGKWLGSRQIRCNWATKGAGSNEDKQSSDVKSIAELTNGS
Sbjct: 181 GFGFVSFRNQQDAQSAINDLTGKWLGSRQIRCNWATKGAGSNEDKQSSDVKSIAELTNGS 240

Query: 241 SEDGKETVNSDAPENNPQYTTVYVGNLAPEARYLILSRSLILQCLFCCLMWATQVDLHRH 300
           SEDGKETVNSDAPENNPQYTTVYVGNLAPE                     ATQVDLHRH
Sbjct: 241 SEDGKETVNSDAPENNPQYTTVYVGNLAPE---------------------ATQVDLHRH 300

Query: 301 FHALGAGVIEEVRIQRDKGFGFVRYSTHAEAALAIQMGNTQSFLCGKQIKCSWGSKPTPP 360
           FHALGAGVIEEVRIQRDKGFGFVRYSTHAEAALAIQMGNTQSFLCGKQIKCSWGSKPTPP
Sbjct: 301 FHALGAGVIEEVRIQRDKGFGFVRYSTHAEAALAIQMGNTQSFLCGKQIKCSWGSKPTPP 360

Query: 361 GTISNPLPPPAAVPMQGLSATDLLTYERQLAMSKMGGVHALMHHPQAPHPLKQAAAMGMG 420
           GTISNPLPPPAAVPMQGLSATDLLTYERQLAMSKMGGVHALMHHPQAPHPLKQAAAMGMG
Sbjct: 361 GTISNPLPPPAAVPMQGLSATDLLTYERQLAMSKMGGVHALMHHPQAPHPLKQAAAMGMG 420

Query: 421 GAAGSSQAIYDGGFQNVAAAQQLI 445
           GAAGSSQAIYDGGFQNVAAAQQL+
Sbjct: 421 GAAGSSQAIYDGGFQNVAAAQQLM 423

[Close]

BLAST of CmoCh08G007830 vs. ExPASy TrEMBL
Match: A0A6J1KJ93 (oligouridylate-binding protein 1B-like OS=Cucurbita maxima OX=3661 GN=LOC111494510 PE=4 SV=1)

HSP 1 Score: 819.7 bits (2116), Expect = 6.3e-234
Identity = 418/444 (94.14%), Postives = 419/444 (94.37%), Query Frame = 0


Query: 1   MQHQRLKQQQQQALMQQALLQQQSLYHPGLLAPPQLEPIPSGNLPPGFDPSTCRSVYVGN 60
           MQHQRLKQQQQQALMQQALLQQQSLYHPGLLAPPQLEPIPSGNLP GFDPSTCRSVYVGN
Sbjct: 1   MQHQRLKQQQQQALMQQALLQQQSLYHPGLLAPPQLEPIPSGNLPLGFDPSTCRSVYVGN 60

Query: 61  IHTQVTEPLLQEVFGSTGLVENCKLVRKEKSSYGFIHYFDRRSAAMAILSLNGRHLFGQP 120
           IHTQVTEPLLQEVFGSTGLVENCKLVRKEKSSYGFIHYFDRRSAAMAILSLNGRHLFGQP
Sbjct: 61  IHTQVTEPLLQEVFGSTGLVENCKLVRKEKSSYGFIHYFDRRSAAMAILSLNGRHLFGQP 120

Query: 121 IKVNWAYASGQREDTSGHFNIFVGDLSPEVTDSTLFACFSVFPSCSDARVMWDQKTGRSR 180
           IKVNWAYASGQREDTSGHFNIFVGDLSPEVTDSTLFACFSVFPSCSDARVMWDQKTGRSR
Sbjct: 121 IKVNWAYASGQREDTSGHFNIFVGDLSPEVTDSTLFACFSVFPSCSDARVMWDQKTGRSR 180

Query: 181 GFGFVSFRNQQDAQSAINDLTGKWLGSRQIRCNWATKGAGSNEDKQSSDVKSIAELTNGS 240
           GFGFVSFRNQQDAQSAINDLTGKWLGSRQIRCNWATKGAGSNEDKQSSDVKSIAELTNGS
Sbjct: 181 GFGFVSFRNQQDAQSAINDLTGKWLGSRQIRCNWATKGAGSNEDKQSSDVKSIAELTNGS 240

Query: 241 SEDGKETVNSDAPENNPQYTTVYVGNLAPEARYLILSRSLILQCLFCCLMWATQVDLHRH 300
           SEDGKETVNSDAPENNPQYTTVYVGNLAPE                      TQVDLHRH
Sbjct: 241 SEDGKETVNSDAPENNPQYTTVYVGNLAPE---------------------VTQVDLHRH 300

Query: 301 FHALGAGVIEEVRIQRDKGFGFVRYSTHAEAALAIQMGNTQSFLCGKQIKCSWGSKPTPP 360
           FHALG GVIEEVRIQRDKGFGFVRYSTHAEAALAIQMGNTQSFLCGKQIKCSWGSKPTPP
Sbjct: 301 FHALG-GVIEEVRIQRDKGFGFVRYSTHAEAALAIQMGNTQSFLCGKQIKCSWGSKPTPP 360

Query: 361 GTISNPLPPPAAVPMQGLSATDLLTYERQLAMSKMGGVHALMHHPQAPHPLKQAAAMGMG 420
           GTISNPLPPPAAVPMQGLSATDLL YERQLAMSKMGGVHALMHHPQAPHPLKQAAAMGMG
Sbjct: 361 GTISNPLPPPAAVPMQGLSATDLLAYERQLAMSKMGGVHALMHHPQAPHPLKQAAAMGMG 420

Query: 421 GAAGSSQAIYDGGFQNVAAAQQLI 445
           GAAGSSQAIYDGGFQNVAAAQQL+
Sbjct: 421 GAAGSSQAIYDGGFQNVAAAQQLM 422

[Close]

BLAST of CmoCh08G007830 vs. ExPASy TrEMBL
Match: A0A6J1GPY9 (oligouridylate-binding protein 1B-like OS=Cucurbita moschata OX=3662 GN=LOC111456407 PE=4 SV=1)

HSP 1 Score: 787.7 bits (2033), Expect = 2.7e-224
Identity = 404/444 (90.99%), Postives = 412/444 (92.79%), Query Frame = 0


Query: 1   MQHQRLKQQQQQALMQQALLQQQSLYHPGLLAPPQLEPIPSGNLPPGFDPSTCRSVYVGN 60
           MQHQRLKQQQQQALMQQALLQQQSLYHPGLLA PQLEPIPSGNLPPGFDPSTCRSVYVGN
Sbjct: 1   MQHQRLKQQQQQALMQQALLQQQSLYHPGLLAHPQLEPIPSGNLPPGFDPSTCRSVYVGN 60

Query: 61  IHTQVTEPLLQEVFGSTGLVENCKLVRKEKSSYGFIHYFDRRSAAMAILSLNGRHLFGQP 120
           +HTQVTEPLLQEVFGSTG+VE+CKLVRKEKSSYGFIHYFDRRSAAMAILSLNGRHLFGQP
Sbjct: 61  VHTQVTEPLLQEVFGSTGVVESCKLVRKEKSSYGFIHYFDRRSAAMAILSLNGRHLFGQP 120

Query: 121 IKVNWAYASGQREDTSGHFNIFVGDLSPEVTDSTLFACFSVFPSCSDARVMWDQKTGRSR 180
           IKVNWAYASGQREDTSGHFNIFVGDLSPEVTDSTLFACFSVFPSCSDARVMWDQKTGRSR
Sbjct: 121 IKVNWAYASGQREDTSGHFNIFVGDLSPEVTDSTLFACFSVFPSCSDARVMWDQKTGRSR 180

Query: 181 GFGFVSFRNQQDAQSAINDLTGKWLGSRQIRCNWATKGAGSNEDKQSSDVKSIAELTNGS 240
           GFGFVSFRNQQDAQSAINDLTGKWLGSRQIRCNWATKGAGSNEDKQSSDVKSIAELTNGS
Sbjct: 181 GFGFVSFRNQQDAQSAINDLTGKWLGSRQIRCNWATKGAGSNEDKQSSDVKSIAELTNGS 240

Query: 241 SEDGKETVNSDAPENNPQYTTVYVGNLAPEARYLILSRSLILQCLFCCLMWATQVDLHRH 300
           SEDGKETVNSDAPENNPQYTTVYVGNLAPE                     ATQVDLHRH
Sbjct: 241 SEDGKETVNSDAPENNPQYTTVYVGNLAPE---------------------ATQVDLHRH 300

Query: 301 FHALGAGVIEEVRIQRDKGFGFVRYSTHAEAALAIQMGNTQSFLCGKQIKCSWGSKPTPP 360
           FHALGAGVIEEVRIQRDKGFGFVRYSTHAEA+LAIQMGNTQS+LCGKQIKCSWGSKPTPP
Sbjct: 301 FHALGAGVIEEVRIQRDKGFGFVRYSTHAEASLAIQMGNTQSYLCGKQIKCSWGSKPTPP 360

Query: 361 GTISNPLPPPAAVPMQGLSATDLLTYERQLAMSKMGGVHALMHHPQAPHPLKQAAAMGMG 420
           GTISNPLPPPAA  + GLSATD+L YERQLAMSKMGGVHALM  PQ PHPLKQAA  GM 
Sbjct: 361 GTISNPLPPPAAGSIPGLSATDILAYERQLAMSKMGGVHALM-QPQIPHPLKQAAMGGM- 420

Query: 421 GAAGSSQAIYDGGFQNVAAAQQLI 445
           GAAGSSQAIYDGGFQNVAAAQQL+
Sbjct: 421 GAAGSSQAIYDGGFQNVAAAQQLM 421

[Close]

BLAST of CmoCh08G007830 vs. ExPASy TrEMBL
Match: A0A5D3BY51 (Oligouridylate-binding protein 1B-like OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold347G001410 PE=4 SV=1)

HSP 1 Score: 786.9 bits (2031), Expect = 4.6e-224
Identity = 407/444 (91.67%), Postives = 414/444 (93.24%), Query Frame = 0


Query: 1   MQHQRLKQQQQQALMQQALLQQQSLYHPGLLAPPQLEPIPSGNLPPGFDPSTCRSVYVGN 60
           MQHQRLKQQQQQALMQQALLQQQSLYHPGLLA PQLEPIPSGNLPPGFDPSTCRSVYVGN
Sbjct: 1   MQHQRLKQQQQQALMQQALLQQQSLYHPGLLAHPQLEPIPSGNLPPGFDPSTCRSVYVGN 60

Query: 61  IHTQVTEPLLQEVFGSTGLVENCKLVRKEKSSYGFIHYFDRRSAAMAILSLNGRHLFGQP 120
           +HTQVTEPLLQEVFGSTGLVE+CKLVRKEKSSYGFIHYFDRRSAAMAILSLNGRHLFGQP
Sbjct: 61  VHTQVTEPLLQEVFGSTGLVESCKLVRKEKSSYGFIHYFDRRSAAMAILSLNGRHLFGQP 120

Query: 121 IKVNWAYASGQREDTSGHFNIFVGDLSPEVTDSTLFACFSVFPSCSDARVMWDQKTGRSR 180
           IKVNWAYASGQREDTSGHFNIFVGDLSPEVTDSTLFACFSVF SCSDARVMWDQKTGRSR
Sbjct: 121 IKVNWAYASGQREDTSGHFNIFVGDLSPEVTDSTLFACFSVFSSCSDARVMWDQKTGRSR 180

Query: 181 GFGFVSFRNQQDAQSAINDLTGKWLGSRQIRCNWATKGAGSNEDKQSSDVKSIAELTNGS 240
           GFGFVSFRNQQDAQSAINDLTGKWLGSRQIRCNWATKGAGSN+DKQSSDVKSIAELTNGS
Sbjct: 181 GFGFVSFRNQQDAQSAINDLTGKWLGSRQIRCNWATKGAGSNDDKQSSDVKSIAELTNGS 240

Query: 241 SEDGKETVNSDAPENNPQYTTVYVGNLAPEARYLILSRSLILQCLFCCLMWATQVDLHRH 300
           SEDGKETV+SDAPENNPQYTTVYVGNLAPE                     ATQVDLHRH
Sbjct: 241 SEDGKETVSSDAPENNPQYTTVYVGNLAPE---------------------ATQVDLHRH 300

Query: 301 FHALGAGVIEEVRIQRDKGFGFVRYSTHAEAALAIQMGNTQSFLCGKQIKCSWGSKPTPP 360
           FH+LGAGVIEEVRIQRDKGFGFVRYSTHAEAALAIQMGNTQSFLCGKQIKCSWGSKPTPP
Sbjct: 301 FHSLGAGVIEEVRIQRDKGFGFVRYSTHAEAALAIQMGNTQSFLCGKQIKCSWGSKPTPP 360

Query: 361 GTISNPLPPPAAVPMQGLSATDLLTYERQLAMSKMGGVHALMHHPQAPHPLKQAAAMGMG 420
           GTISNPLPPPAA PM GLS +DLL YERQLAMSKMGGVHALM HPQAPHPLKQ AAMGM 
Sbjct: 361 GTISNPLPPPAAAPM-GLSTSDLLAYERQLAMSKMGGVHALM-HPQAPHPLKQ-AAMGM- 419

Query: 421 GAAGSSQAIYDGGFQNVAAAQQLI 445
           GAAGSSQAIYDGGFQNVAAAQQL+
Sbjct: 421 GAAGSSQAIYDGGFQNVAAAQQLM 419

[Close]

BLAST of CmoCh08G007830 vs. ExPASy TrEMBL
Match: A0A0A0K9E9 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_7G448800 PE=4 SV=1)

HSP 1 Score: 786.9 bits (2031), Expect = 4.6e-224
Identity = 407/444 (91.67%), Postives = 414/444 (93.24%), Query Frame = 0


Query: 1   MQHQRLKQQQQQALMQQALLQQQSLYHPGLLAPPQLEPIPSGNLPPGFDPSTCRSVYVGN 60
           MQHQRLKQQQQQALMQQALLQQQSLYHPGLLA PQLEPIPSGNLPPGFDPSTCRSVYVGN
Sbjct: 1   MQHQRLKQQQQQALMQQALLQQQSLYHPGLLAHPQLEPIPSGNLPPGFDPSTCRSVYVGN 60

Query: 61  IHTQVTEPLLQEVFGSTGLVENCKLVRKEKSSYGFIHYFDRRSAAMAILSLNGRHLFGQP 120
           +HTQVTEPLLQEVFGSTGLVE+CKLVRKEKSSYGFIHYFDRRSAAMAILSLNGRHLFGQP
Sbjct: 61  VHTQVTEPLLQEVFGSTGLVESCKLVRKEKSSYGFIHYFDRRSAAMAILSLNGRHLFGQP 120

Query: 121 IKVNWAYASGQREDTSGHFNIFVGDLSPEVTDSTLFACFSVFPSCSDARVMWDQKTGRSR 180
           IKVNWAYASGQREDTSGHFNIFVGDLSPEVTDSTLFACFSVF SCSDARVMWDQKTGRSR
Sbjct: 121 IKVNWAYASGQREDTSGHFNIFVGDLSPEVTDSTLFACFSVFSSCSDARVMWDQKTGRSR 180

Query: 181 GFGFVSFRNQQDAQSAINDLTGKWLGSRQIRCNWATKGAGSNEDKQSSDVKSIAELTNGS 240
           GFGFVSFRNQQDAQSAINDLTGKWLGSRQIRCNWATKGAGSN+DKQSSDVKSIAELTNGS
Sbjct: 181 GFGFVSFRNQQDAQSAINDLTGKWLGSRQIRCNWATKGAGSNDDKQSSDVKSIAELTNGS 240

Query: 241 SEDGKETVNSDAPENNPQYTTVYVGNLAPEARYLILSRSLILQCLFCCLMWATQVDLHRH 300
           SEDGKETV+SDAPENNPQYTTVYVGNLAPE                     ATQVDLHRH
Sbjct: 241 SEDGKETVSSDAPENNPQYTTVYVGNLAPE---------------------ATQVDLHRH 300

Query: 301 FHALGAGVIEEVRIQRDKGFGFVRYSTHAEAALAIQMGNTQSFLCGKQIKCSWGSKPTPP 360
           FH+LGAGVIEEVRIQRDKGFGFVRYSTHAEAALAIQMGNTQSFLCGKQIKCSWGSKPTPP
Sbjct: 301 FHSLGAGVIEEVRIQRDKGFGFVRYSTHAEAALAIQMGNTQSFLCGKQIKCSWGSKPTPP 360

Query: 361 GTISNPLPPPAAVPMQGLSATDLLTYERQLAMSKMGGVHALMHHPQAPHPLKQAAAMGMG 420
           GTISNPLPPPAA PM GLS +DLL YERQLAMSKMGGVHALM HPQAPHPLKQ AAMGM 
Sbjct: 361 GTISNPLPPPAAAPM-GLSTSDLLAYERQLAMSKMGGVHALM-HPQAPHPLKQ-AAMGM- 419

Query: 421 GAAGSSQAIYDGGFQNVAAAQQLI 445
           GAAGSSQAIYDGGFQNVAAAQQL+
Sbjct: 421 GAAGSSQAIYDGGFQNVAAAQQLM 419

[Close]

BLAST of CmoCh08G007830 vs. NCBI nr
Match: KAG7025906.1 (Oligouridylate-binding protein 1B [Cucurbita argyrosperma subsp. argyrosperma])

HSP 1 Score: 852.0 bits (2200), Expect = 2.4e-243
Identity = 432/449 (96.21%), Postives = 437/449 (97.33%), Query Frame = 0


Query: 1   MQHQRLKQQQQQALMQQALLQQQSLYHPGLLAPPQLEPIPSGNLPPGFDPSTCRSVYVGN 60
           MQHQRLKQQQQQALMQQALLQQQSLYHPGLLAPPQLEPIPSGNLPPGFDPSTCRSVYVGN
Sbjct: 1   MQHQRLKQQQQQALMQQALLQQQSLYHPGLLAPPQLEPIPSGNLPPGFDPSTCRSVYVGN 60

Query: 61  IHTQVTEPLLQEVFGSTGLVENCKLVRKEKSSYGFIHYFDRRSAAMAILSLNGRHLFGQP 120
           IHTQVTEPLLQEVFGSTGLVENCKLVRKEKSSYGFIHYFDRRSAAMAILSLNGRHLFGQP
Sbjct: 61  IHTQVTEPLLQEVFGSTGLVENCKLVRKEKSSYGFIHYFDRRSAAMAILSLNGRHLFGQP 120

Query: 121 IKVNWAYASGQREDTSGHFNIFVGDLSPEVTDSTLFACFSVFPSCSDARVMWDQKTGRSR 180
           IKVNWAYASGQREDTSGHFNIFVGDLSPEVTDSTLFACFSVFPSCSDARVMWDQKTGRSR
Sbjct: 121 IKVNWAYASGQREDTSGHFNIFVGDLSPEVTDSTLFACFSVFPSCSDARVMWDQKTGRSR 180

Query: 181 GFGFVSFRNQQDAQSAINDLTGKWLGSRQIRCNWATKGAGSNEDKQSSDVKSIAELTNGS 240
           GFGFVSFRNQQDAQSAINDLTGKWLGSRQIRCNWATKGAGSNEDKQSSDVKSIAELTNGS
Sbjct: 181 GFGFVSFRNQQDAQSAINDLTGKWLGSRQIRCNWATKGAGSNEDKQSSDVKSIAELTNGS 240

Query: 241 SEDGKETVNSDAPENNPQYTTVYVGNLAPEARYLILSRS-----LILQCLFCCLMWATQV 300
           SEDGKETVNSDAPENNPQYTTVYVGNLAPEARYLILS +     +I+ CLF   + ATQV
Sbjct: 241 SEDGKETVNSDAPENNPQYTTVYVGNLAPEARYLILSGTFWSYKIIVPCLF---IQATQV 300

Query: 301 DLHRHFHALGAGVIEEVRIQRDKGFGFVRYSTHAEAALAIQMGNTQSFLCGKQIKCSWGS 360
           DLHRHFHALGAGVIEEVRIQRDKGFGFVRYSTHAEAALAIQMGNTQSFLCGKQIKCSWGS
Sbjct: 301 DLHRHFHALGAGVIEEVRIQRDKGFGFVRYSTHAEAALAIQMGNTQSFLCGKQIKCSWGS 360

Query: 361 KPTPPGTISNPLPPPAAVPMQGLSATDLLTYERQLAMSKMGGVHALMHHPQAPHPLKQAA 420
           KPTPPGTISNPLPPPAAVPMQGLSATDLL YERQLAMSKMGGVHALMHHPQAPHPLKQAA
Sbjct: 361 KPTPPGTISNPLPPPAAVPMQGLSATDLLAYERQLAMSKMGGVHALMHHPQAPHPLKQAA 420

Query: 421 AMGMGGAAGSSQAIYDGGFQNVAAAQQLI 445
           AMGMGGAAGSSQAIYDGGFQNVAAAQQL+
Sbjct: 421 AMGMGGAAGSSQAIYDGGFQNVAAAQQLM 446

[Close]

BLAST of CmoCh08G007830 vs. NCBI nr
Match: XP_022964506.1 (oligouridylate-binding protein 1B-like [Cucurbita moschata])

HSP 1 Score: 833.2 bits (2151), Expect = 1.1e-237
Identity = 422/444 (95.05%), Postives = 423/444 (95.27%), Query Frame = 0


Query: 1   MQHQRLKQQQQQALMQQALLQQQSLYHPGLLAPPQLEPIPSGNLPPGFDPSTCRSVYVGN 60
           MQHQRLKQQQQQALMQQALLQQQSLYHPGLLAPPQLEPIPSGNLPPGFDPSTCRSVYVGN
Sbjct: 1   MQHQRLKQQQQQALMQQALLQQQSLYHPGLLAPPQLEPIPSGNLPPGFDPSTCRSVYVGN 60

Query: 61  IHTQVTEPLLQEVFGSTGLVENCKLVRKEKSSYGFIHYFDRRSAAMAILSLNGRHLFGQP 120
           IHTQVTEPLLQEVFGSTGLVENCKLVRKEKSSYGFIHYFDRRSAAMAILSLNGRHLFGQP
Sbjct: 61  IHTQVTEPLLQEVFGSTGLVENCKLVRKEKSSYGFIHYFDRRSAAMAILSLNGRHLFGQP 120

Query: 121 IKVNWAYASGQREDTSGHFNIFVGDLSPEVTDSTLFACFSVFPSCSDARVMWDQKTGRSR 180
           IKVNWAYASGQREDTSGHFNIFVGDLSPEVTDSTLFACFSVFPSCSDARVMWDQKTGRSR
Sbjct: 121 IKVNWAYASGQREDTSGHFNIFVGDLSPEVTDSTLFACFSVFPSCSDARVMWDQKTGRSR 180

Query: 181 GFGFVSFRNQQDAQSAINDLTGKWLGSRQIRCNWATKGAGSNEDKQSSDVKSIAELTNGS 240
           GFGFVSFRNQQDAQSAINDLTGKWLGSRQIRCNWATKGAGSNEDKQSSDVKSIAELTNGS
Sbjct: 181 GFGFVSFRNQQDAQSAINDLTGKWLGSRQIRCNWATKGAGSNEDKQSSDVKSIAELTNGS 240

Query: 241 SEDGKETVNSDAPENNPQYTTVYVGNLAPEARYLILSRSLILQCLFCCLMWATQVDLHRH 300
           SEDGKETVNSDAPENNPQYTTVYVGNLAPE                     ATQVDLHRH
Sbjct: 241 SEDGKETVNSDAPENNPQYTTVYVGNLAPE---------------------ATQVDLHRH 300

Query: 301 FHALGAGVIEEVRIQRDKGFGFVRYSTHAEAALAIQMGNTQSFLCGKQIKCSWGSKPTPP 360
           FHALGAGVIEEVRIQRDKGFGFVRYSTHAEAALAIQMGNTQSFLCGKQIKCSWGSKPTPP
Sbjct: 301 FHALGAGVIEEVRIQRDKGFGFVRYSTHAEAALAIQMGNTQSFLCGKQIKCSWGSKPTPP 360

Query: 361 GTISNPLPPPAAVPMQGLSATDLLTYERQLAMSKMGGVHALMHHPQAPHPLKQAAAMGMG 420
           GTISNPLPPPAAVPMQGLSATDLLTYERQLAMSKMGGVHALMHHPQAPHPLKQAAAMGMG
Sbjct: 361 GTISNPLPPPAAVPMQGLSATDLLTYERQLAMSKMGGVHALMHHPQAPHPLKQAAAMGMG 420

Query: 421 GAAGSSQAIYDGGFQNVAAAQQLI 445
           GAAGSSQAIYDGGFQNVAAAQQL+
Sbjct: 421 GAAGSSQAIYDGGFQNVAAAQQLM 423

[Close]

BLAST of CmoCh08G007830 vs. NCBI nr
Match: KAG6593563.1 (Oligouridylate-binding protein 1B, partial [Cucurbita argyrosperma subsp. sororia])

HSP 1 Score: 831.2 bits (2146), Expect = 4.3e-237
Identity = 421/444 (94.82%), Postives = 422/444 (95.05%), Query Frame = 0


Query: 1   MQHQRLKQQQQQALMQQALLQQQSLYHPGLLAPPQLEPIPSGNLPPGFDPSTCRSVYVGN 60
           MQHQRLKQQQQQALMQQALLQQQSLYHPGLLAPPQLEPIPSGNLPPGFDPSTCRSVYVGN
Sbjct: 1   MQHQRLKQQQQQALMQQALLQQQSLYHPGLLAPPQLEPIPSGNLPPGFDPSTCRSVYVGN 60

Query: 61  IHTQVTEPLLQEVFGSTGLVENCKLVRKEKSSYGFIHYFDRRSAAMAILSLNGRHLFGQP 120
           IHTQVTEPLLQEVFGSTGLVENCKLVRKEKSSYGFIHYFDRRSAAMAILSLNGRHLFGQP
Sbjct: 61  IHTQVTEPLLQEVFGSTGLVENCKLVRKEKSSYGFIHYFDRRSAAMAILSLNGRHLFGQP 120

Query: 121 IKVNWAYASGQREDTSGHFNIFVGDLSPEVTDSTLFACFSVFPSCSDARVMWDQKTGRSR 180
           IKVNWAYASGQREDTSGHFNIFVGDLSPEVTDSTLFACFSVFPSCSDARVMWDQKTGRSR
Sbjct: 121 IKVNWAYASGQREDTSGHFNIFVGDLSPEVTDSTLFACFSVFPSCSDARVMWDQKTGRSR 180

Query: 181 GFGFVSFRNQQDAQSAINDLTGKWLGSRQIRCNWATKGAGSNEDKQSSDVKSIAELTNGS 240
           GFGFVSFRNQQDAQSAINDLTGKWLGSRQIRCNWATKGAGSNEDKQSSDVKSIAELTNGS
Sbjct: 181 GFGFVSFRNQQDAQSAINDLTGKWLGSRQIRCNWATKGAGSNEDKQSSDVKSIAELTNGS 240

Query: 241 SEDGKETVNSDAPENNPQYTTVYVGNLAPEARYLILSRSLILQCLFCCLMWATQVDLHRH 300
           SEDGKETVNSDAPENNPQYTTVYVGNLAPE                     ATQVDLHRH
Sbjct: 241 SEDGKETVNSDAPENNPQYTTVYVGNLAPE---------------------ATQVDLHRH 300

Query: 301 FHALGAGVIEEVRIQRDKGFGFVRYSTHAEAALAIQMGNTQSFLCGKQIKCSWGSKPTPP 360
           FHALGAGVIEEVRIQRDKGFGFVRYSTHAEAALAIQMGNTQSFLCGKQIKCSWGSKPTPP
Sbjct: 301 FHALGAGVIEEVRIQRDKGFGFVRYSTHAEAALAIQMGNTQSFLCGKQIKCSWGSKPTPP 360

Query: 361 GTISNPLPPPAAVPMQGLSATDLLTYERQLAMSKMGGVHALMHHPQAPHPLKQAAAMGMG 420
           GTISNPLPPPAAVPMQGLSATDLL YERQLAMSKMGGVHALMHHPQAPHPLKQAAAMGMG
Sbjct: 361 GTISNPLPPPAAVPMQGLSATDLLAYERQLAMSKMGGVHALMHHPQAPHPLKQAAAMGMG 420

Query: 421 GAAGSSQAIYDGGFQNVAAAQQLI 445
           GAAGSSQAIYDGGFQNVAAAQQL+
Sbjct: 421 GAAGSSQAIYDGGFQNVAAAQQLM 423

[Close]

BLAST of CmoCh08G007830 vs. NCBI nr
Match: XP_023000219.1 (oligouridylate-binding protein 1B-like [Cucurbita maxima])

HSP 1 Score: 819.7 bits (2116), Expect = 1.3e-233
Identity = 418/444 (94.14%), Postives = 419/444 (94.37%), Query Frame = 0


Query: 1   MQHQRLKQQQQQALMQQALLQQQSLYHPGLLAPPQLEPIPSGNLPPGFDPSTCRSVYVGN 60
           MQHQRLKQQQQQALMQQALLQQQSLYHPGLLAPPQLEPIPSGNLP GFDPSTCRSVYVGN
Sbjct: 1   MQHQRLKQQQQQALMQQALLQQQSLYHPGLLAPPQLEPIPSGNLPLGFDPSTCRSVYVGN 60

Query: 61  IHTQVTEPLLQEVFGSTGLVENCKLVRKEKSSYGFIHYFDRRSAAMAILSLNGRHLFGQP 120
           IHTQVTEPLLQEVFGSTGLVENCKLVRKEKSSYGFIHYFDRRSAAMAILSLNGRHLFGQP
Sbjct: 61  IHTQVTEPLLQEVFGSTGLVENCKLVRKEKSSYGFIHYFDRRSAAMAILSLNGRHLFGQP 120

Query: 121 IKVNWAYASGQREDTSGHFNIFVGDLSPEVTDSTLFACFSVFPSCSDARVMWDQKTGRSR 180
           IKVNWAYASGQREDTSGHFNIFVGDLSPEVTDSTLFACFSVFPSCSDARVMWDQKTGRSR
Sbjct: 121 IKVNWAYASGQREDTSGHFNIFVGDLSPEVTDSTLFACFSVFPSCSDARVMWDQKTGRSR 180

Query: 181 GFGFVSFRNQQDAQSAINDLTGKWLGSRQIRCNWATKGAGSNEDKQSSDVKSIAELTNGS 240
           GFGFVSFRNQQDAQSAINDLTGKWLGSRQIRCNWATKGAGSNEDKQSSDVKSIAELTNGS
Sbjct: 181 GFGFVSFRNQQDAQSAINDLTGKWLGSRQIRCNWATKGAGSNEDKQSSDVKSIAELTNGS 240

Query: 241 SEDGKETVNSDAPENNPQYTTVYVGNLAPEARYLILSRSLILQCLFCCLMWATQVDLHRH 300
           SEDGKETVNSDAPENNPQYTTVYVGNLAPE                      TQVDLHRH
Sbjct: 241 SEDGKETVNSDAPENNPQYTTVYVGNLAPE---------------------VTQVDLHRH 300

Query: 301 FHALGAGVIEEVRIQRDKGFGFVRYSTHAEAALAIQMGNTQSFLCGKQIKCSWGSKPTPP 360
           FHALG GVIEEVRIQRDKGFGFVRYSTHAEAALAIQMGNTQSFLCGKQIKCSWGSKPTPP
Sbjct: 301 FHALG-GVIEEVRIQRDKGFGFVRYSTHAEAALAIQMGNTQSFLCGKQIKCSWGSKPTPP 360

Query: 361 GTISNPLPPPAAVPMQGLSATDLLTYERQLAMSKMGGVHALMHHPQAPHPLKQAAAMGMG 420
           GTISNPLPPPAAVPMQGLSATDLL YERQLAMSKMGGVHALMHHPQAPHPLKQAAAMGMG
Sbjct: 361 GTISNPLPPPAAVPMQGLSATDLLAYERQLAMSKMGGVHALMHHPQAPHPLKQAAAMGMG 420

Query: 421 GAAGSSQAIYDGGFQNVAAAQQLI 445
           GAAGSSQAIYDGGFQNVAAAQQL+
Sbjct: 421 GAAGSSQAIYDGGFQNVAAAQQLM 422

[Close]

BLAST of CmoCh08G007830 vs. NCBI nr
Match: XP_038898678.1 (oligouridylate-binding protein 1B-like [Benincasa hispida])

HSP 1 Score: 796.2 bits (2055), Expect = 1.5e-226
Identity = 409/444 (92.12%), Postives = 415/444 (93.47%), Query Frame = 0


Query: 1   MQHQRLKQQQQQALMQQALLQQQSLYHPGLLAPPQLEPIPSGNLPPGFDPSTCRSVYVGN 60
           MQHQRLKQQQQQALMQQALLQQQSLYHPGLLA PQLEPIPSGNLPPGFDPSTCRSVYVGN
Sbjct: 1   MQHQRLKQQQQQALMQQALLQQQSLYHPGLLAHPQLEPIPSGNLPPGFDPSTCRSVYVGN 60

Query: 61  IHTQVTEPLLQEVFGSTGLVENCKLVRKEKSSYGFIHYFDRRSAAMAILSLNGRHLFGQP 120
           +HTQVTEPLLQEVFGSTGLVE+CKLVRKEKSSYGFIHYFDRRSAAMAILSLNGRHLFGQP
Sbjct: 61  VHTQVTEPLLQEVFGSTGLVESCKLVRKEKSSYGFIHYFDRRSAAMAILSLNGRHLFGQP 120

Query: 121 IKVNWAYASGQREDTSGHFNIFVGDLSPEVTDSTLFACFSVFPSCSDARVMWDQKTGRSR 180
           IKVNWAYASGQREDTSGHFNIFVGDLSPEVTDSTLFACFSVFPSCSDARVMWDQKTGRSR
Sbjct: 121 IKVNWAYASGQREDTSGHFNIFVGDLSPEVTDSTLFACFSVFPSCSDARVMWDQKTGRSR 180

Query: 181 GFGFVSFRNQQDAQSAINDLTGKWLGSRQIRCNWATKGAGSNEDKQSSDVKSIAELTNGS 240
           GFGFVSFRNQQDAQSAINDLTGKWLGSRQIRCNWATKGAGSN+DKQSSDVKSIAELTNGS
Sbjct: 181 GFGFVSFRNQQDAQSAINDLTGKWLGSRQIRCNWATKGAGSNDDKQSSDVKSIAELTNGS 240

Query: 241 SEDGKETVNSDAPENNPQYTTVYVGNLAPEARYLILSRSLILQCLFCCLMWATQVDLHRH 300
           SEDGKETVNSDAPENNPQYTTVYVGNLAPE                     ATQVDLHRH
Sbjct: 241 SEDGKETVNSDAPENNPQYTTVYVGNLAPE---------------------ATQVDLHRH 300

Query: 301 FHALGAGVIEEVRIQRDKGFGFVRYSTHAEAALAIQMGNTQSFLCGKQIKCSWGSKPTPP 360
           FH+LGAGVIEEVRIQRDKGFGFVRYSTHAEAALAIQMGN QSFLCGKQIKCSWGSKPTPP
Sbjct: 301 FHSLGAGVIEEVRIQRDKGFGFVRYSTHAEAALAIQMGNAQSFLCGKQIKCSWGSKPTPP 360

Query: 361 GTISNPLPPPAAVPMQGLSATDLLTYERQLAMSKMGGVHALMHHPQAPHPLKQAAAMGMG 420
           GTISNPLPPPAAVP+ GLS TDLL YERQLAMSKMGGVHALM HPQAPHPLKQ AAMGM 
Sbjct: 361 GTISNPLPPPAAVPLPGLSTTDLLAYERQLAMSKMGGVHALM-HPQAPHPLKQ-AAMGM- 420

Query: 421 GAAGSSQAIYDGGFQNVAAAQQLI 445
           GAAGSSQAIYDGGFQNVAAAQQL+
Sbjct: 421 GAAGSSQAIYDGGFQNVAAAQQLM 420

[Close]

BLAST of CmoCh08G007830 vs. TAIR 10
Match: AT1G17370.1 (oligouridylate binding protein 1B )

HSP 1 Score: 686.8 bits (1771), Expect = 1.2e-197
Identity = 343/444 (77.25%), Postives = 377/444 (84.91%), Query Frame = 0


Query: 1   MQHQRLKQQQQQALMQQALLQQQSLYHPGLLAPPQLEPIPSGNLPPGFDPSTCRSVYVGN 60
           MQ  + +QQQQQ +MQQAL+QQQSLYHPGLLAPPQ+EPIPSGNLPPGFDPSTCRSVYVGN
Sbjct: 1   MQRLKQQQQQQQVMMQQALMQQQSLYHPGLLAPPQIEPIPSGNLPPGFDPSTCRSVYVGN 60

Query: 61  IHTQVTEPLLQEVFGSTGLVENCKLVRKEKSSYGFIHYFDRRSAAMAILSLNGRHLFGQP 120
           IH QVTEPLLQEVF  TG VE+CKL+RKEKSSYGF+HYFDRRSA +AILSLNGRHLFGQP
Sbjct: 61  IHIQVTEPLLQEVFAGTGPVESCKLIRKEKSSYGFVHYFDRRSAGLAILSLNGRHLFGQP 120

Query: 121 IKVNWAYASGQREDTSGHFNIFVGDLSPEVTDSTLFACFSVFPSCSDARVMWDQKTGRSR 180
           IKVNWAYASGQREDTS HFNIFVGDLSPEVTD+ LF CFSV+P+CSDARVMWDQKTGRSR
Sbjct: 121 IKVNWAYASGQREDTSSHFNIFVGDLSPEVTDAMLFTCFSVYPTCSDARVMWDQKTGRSR 180

Query: 181 GFGFVSFRNQQDAQSAINDLTGKWLGSRQIRCNWATKGAGSNEDKQSSDVKSIAELTNGS 240
           GFGFVSFRNQQDAQ+AI+++TGKWLGSRQIRCNWATKGA S EDKQSSD KS+ ELT+G 
Sbjct: 181 GFGFVSFRNQQDAQTAIDEITGKWLGSRQIRCNWATKGATSGEDKQSSDSKSVVELTSGV 240

Query: 241 SEDGKETVNSDAPENNPQYTTVYVGNLAPEARYLILSRSLILQCLFCCLMWATQVDLHRH 300
           SEDGK+T N +APENN QYTTVYVGNLAPE                      +QVDLHRH
Sbjct: 241 SEDGKDTTNGEAPENNAQYTTVYVGNLAPE---------------------VSQVDLHRH 300

Query: 301 FHALGAGVIEEVRIQRDKGFGFVRYSTHAEAALAIQMGNTQSFLCGKQIKCSWGSKPTPP 360
           FH+LGAGVIEEVR+QRDKGFGFVRYSTH EAALAIQMGNT S+L G+Q+KCSWGSKPTP 
Sbjct: 301 FHSLGAGVIEEVRVQRDKGFGFVRYSTHVEAALAIQMGNTHSYLSGRQMKCSWGSKPTPA 360

Query: 361 GTISNPLPPPAAVPMQGLSATDLLTYERQLAMSKMGGVHALMHHPQAPHPLKQAAAMGMG 420
           GT SNPLPPPA  P+ G SA+DLL YERQLAMSKM G++ +MHHPQ  H  KQAA     
Sbjct: 361 GTASNPLPPPAPAPIPGFSASDLLAYERQLAMSKMAGMNPMMHHPQGQHAFKQAAM---- 416

Query: 421 GAAGSSQAIYDGGFQNVAAAQQLI 445
           GA GS+QAIYDGG+QN   AQQL+
Sbjct: 421 GATGSNQAIYDGGYQN---AQQLM 416

[Close]

BLAST of CmoCh08G007830 vs. TAIR 10
Match: AT1G17370.2 (oligouridylate binding protein 1B )

HSP 1 Score: 679.5 bits (1752), Expect = 2.0e-195
Identity = 341/444 (76.80%), Postives = 375/444 (84.46%), Query Frame = 0


Query: 1   MQHQRLKQQQQQALMQQALLQQQSLYHPGLLAPPQLEPIPSGNLPPGFDPSTCRSVYVGN 60
           MQ  + +QQQQQ +MQQAL+QQQSLYHPGLLAPPQ+EPIPSGNLPPGFDPSTCRSVYVGN
Sbjct: 1   MQRLKQQQQQQQVMMQQALMQQQSLYHPGLLAPPQIEPIPSGNLPPGFDPSTCRSVYVGN 60

Query: 61  IHTQVTEPLLQEVFGSTGLVENCKLVRKEKSSYGFIHYFDRRSAAMAILSLNGRHLFGQP 120
           IH QVTEPLLQEVF  TG VE+CKL+RKEKSSYGF+HYFDRRSA +AILSLNGRHLFGQP
Sbjct: 61  IHIQVTEPLLQEVFAGTGPVESCKLIRKEKSSYGFVHYFDRRSAGLAILSLNGRHLFGQP 120

Query: 121 IKVNWAYASGQREDTSGHFNIFVGDLSPEVTDSTLFACFSVFPSCSDARVMWDQKTGRSR 180
           IKVNWAYASGQREDTS HFNIFVGDLSPEVTD+ LF CFSV+P+CSDARVMWDQKTGRSR
Sbjct: 121 IKVNWAYASGQREDTSSHFNIFVGDLSPEVTDAMLFTCFSVYPTCSDARVMWDQKTGRSR 180

Query: 181 GFGFVSFRNQQDAQSAINDLTGKWLGSRQIRCNWATKGAGSNEDKQSSDVKSIAELTNGS 240
           GFGFVSFRNQQDAQ+AI+++TGKWLGSRQIRCNWATKGA S EDKQSSD KS+ ELT+G 
Sbjct: 181 GFGFVSFRNQQDAQTAIDEITGKWLGSRQIRCNWATKGATSGEDKQSSDSKSVVELTSG- 240

Query: 241 SEDGKETVNSDAPENNPQYTTVYVGNLAPEARYLILSRSLILQCLFCCLMWATQVDLHRH 300
             DGK+T N +APENN QYTTVYVGNLAPE                      +QVDLHRH
Sbjct: 241 --DGKDTTNGEAPENNAQYTTVYVGNLAPE---------------------VSQVDLHRH 300

Query: 301 FHALGAGVIEEVRIQRDKGFGFVRYSTHAEAALAIQMGNTQSFLCGKQIKCSWGSKPTPP 360
           FH+LGAGVIEEVR+QRDKGFGFVRYSTH EAALAIQMGNT S+L G+Q+KCSWGSKPTP 
Sbjct: 301 FHSLGAGVIEEVRVQRDKGFGFVRYSTHVEAALAIQMGNTHSYLSGRQMKCSWGSKPTPA 360

Query: 361 GTISNPLPPPAAVPMQGLSATDLLTYERQLAMSKMGGVHALMHHPQAPHPLKQAAAMGMG 420
           GT SNPLPPPA  P+ G SA+DLL YERQLAMSKM G++ +MHHPQ  H  KQAA     
Sbjct: 361 GTASNPLPPPAPAPIPGFSASDLLAYERQLAMSKMAGMNPMMHHPQGQHAFKQAAM---- 413

Query: 421 GAAGSSQAIYDGGFQNVAAAQQLI 445
           GA GS+QAIYDGG+QN   AQQL+
Sbjct: 421 GATGSNQAIYDGGYQN---AQQLM 413

[Close]

BLAST of CmoCh08G007830 vs. TAIR 10
Match: AT3G14100.1 (RNA-binding (RRM/RBD/RNP motifs) family protein )

HSP 1 Score: 666.0 bits (1717), Expect = 2.3e-191
Identity = 341/449 (75.95%), Postives = 379/449 (84.41%), Query Frame = 0


Query: 1   MQHQRLK----QQQQQALM-QQALLQQQSLYHPGLLAPPQLEPIPSGNLPPGFDPSTCRS 60
           MQ+ RLK    QQQQQA+M QQAL+QQ SLYHPG+LAPPQLEP+PSGNLPPGFDPSTCRS
Sbjct: 1   MQNPRLKQHQQQQQQQAMMQQQALMQQHSLYHPGVLAPPQLEPVPSGNLPPGFDPSTCRS 60

Query: 61  VYVGNIHTQVTEPLLQEVFGSTGLVENCKLVRKEKSSYGFIHYFDRRSAAMAILSLNGRH 120
           VYVGNIHTQVTEPLLQE+F STG VE+ KL+RK+KSSYGF+HYFDRRSAA+AILSLNGRH
Sbjct: 61  VYVGNIHTQVTEPLLQEIFTSTGPVESSKLIRKDKSSYGFVHYFDRRSAALAILSLNGRH 120

Query: 121 LFGQPIKVNWAYASGQREDTSGHFNIFVGDLSPEVTDSTLFACFSVFPSCSDARVMWDQK 180
           LFGQPIKVNWAYA+GQREDTS HFNIFVGDLSPEVTD+TL+  FSVF SCSDARVMWDQK
Sbjct: 121 LFGQPIKVNWAYATGQREDTSSHFNIFVGDLSPEVTDATLYQSFSVFSSCSDARVMWDQK 180

Query: 181 TGRSRGFGFVSFRNQQDAQSAINDLTGKWLGSRQIRCNWATKGAGSNEDKQSSDVKSIAE 240
           TGRSRGFGFVSFRNQQDAQ+AIN++ GKWL SRQIRCNWATKGA S +DK SSD KS+ E
Sbjct: 181 TGRSRGFGFVSFRNQQDAQTAINEMNGKWLSSRQIRCNWATKGATSGDDKLSSDGKSVVE 240

Query: 241 LTNGSSEDGKETVNSDAPENNPQYTTVYVGNLAPEARYLILSRSLILQCLFCCLMWATQV 300
           LT GSSEDGKET+N + PENN Q+TTVYVGNLAPE                      TQ+
Sbjct: 241 LTTGSSEDGKETLNEETPENNSQFTTVYVGNLAPE---------------------VTQL 300

Query: 301 DLHRHFHALGAGVIEEVRIQRDKGFGFVRYSTHAEAALAIQMGNTQSFLCGKQIKCSWGS 360
           DLHR+FHALGAGVIEEVR+QRDKGFGFVRY+TH EAALAIQMGNTQ +L  +QIKCSWG+
Sbjct: 301 DLHRYFHALGAGVIEEVRVQRDKGFGFVRYNTHPEAALAIQMGNTQPYLFNRQIKCSWGN 360

Query: 361 KPTPPGTISNPLPPPAAVPMQGLSATDLLTYERQLAMSKMGGVHALMHHPQAPHPLKQAA 420
           KPTPPGT SNPLPPPA  P+ GLSA DLL YERQLA+SKM  V+ALMH  Q  HPL+QA 
Sbjct: 361 KPTPPGTASNPLPPPAPAPVPGLSAADLLNYERQLALSKMASVNALMHQ-QGQHPLRQAH 420

Query: 421 AMGMGGAAGSSQAIYDGGFQNVAAAQQLI 445
            +    AAG++ A+YDGGFQNVAAAQQL+
Sbjct: 421 GI---NAAGATAAMYDGGFQNVAAAQQLM 424

[Close]

BLAST of CmoCh08G007830 vs. TAIR 10
Match: AT1G54080.1 (oligouridylate-binding protein 1A )

HSP 1 Score: 619.8 bits (1597), Expect = 1.9e-177
Identity = 313/448 (69.87%), Postives = 361/448 (80.58%), Query Frame = 0


Query: 2   QHQRLKQQQQQALMQQALLQQQ-SLYHPGLLAPPQLEPIPSGNLPPGFDPSTCRSVYVGN 61
           Q Q+ +QQ QQA++QQA++QQ  SLYHPG++APPQ+EP+PSGNLPPGFDP+TCRSVY GN
Sbjct: 10  QQQQQQQQHQQAMIQQAMMQQHPSLYHPGVMAPPQMEPLPSGNLPPGFDPTTCRSVYAGN 69

Query: 62  IHTQVTEPLLQEVFGSTGLVENCKLVRKEKSSYGFIHYFDRRSAAMAILSLNGRHLFGQP 121
           IHTQVTE LLQE+F STG +E+CKL+RK+KSSYGF+HYFDRR A+MAI++LNGRH+FGQP
Sbjct: 70  IHTQVTEILLQEIFASTGPIESCKLIRKDKSSYGFVHYFDRRCASMAIMTLNGRHIFGQP 129

Query: 122 IKVNWAYASGQREDTSGHFNIFVGDLSPEVTDSTLFACFSVFPSCSDARVMWDQKTGRSR 181
           +KVNWAYA+GQREDTS HFNIFVGDLSPEVTD+ LF  FS F SCSDARVMWDQKTGRSR
Sbjct: 130 MKVNWAYATGQREDTSSHFNIFVGDLSPEVTDAALFDSFSAFNSCSDARVMWDQKTGRSR 189

Query: 182 GFGFVSFRNQQDAQSAINDLTGKWLGSRQIRCNWATKGAGSNEDKQSSDVKSIAELTNGS 241
           GFGFVSFRNQQDAQ+AIN++ GKW+ SRQIRCNWATKGA   EDK SSD KS+ ELTNGS
Sbjct: 190 GFGFVSFRNQQDAQTAINEMNGKWVSSRQIRCNWATKGATFGEDKHSSDGKSVVELTNGS 249

Query: 242 SEDGKETVNSDAPENNPQYTTVYVGNLAPEARYLILSRSLILQCLFCCLMWATQVDLHRH 301
           SEDG+E  N DAPENNPQ+TTVYVGNL+PE                      TQ+DLHR 
Sbjct: 250 SEDGRELSNEDAPENNPQFTTVYVGNLSPE---------------------VTQLDLHRL 309

Query: 302 FHALGAGVIEEVRIQRDKGFGFVRYSTHAEAALAIQMGNTQSFLCGKQIKCSWGSKPTPP 361
           F+ LGAGVIEEVR+QRDKGFGFVRY+TH EAALAIQMGN Q FL  +QI+CSWG+KPTP 
Sbjct: 310 FYTLGAGVIEEVRVQRDKGFGFVRYNTHDEAALAIQMGNAQPFLFSRQIRCSWGNKPTPS 369

Query: 362 GTISNPLPPPAAVPMQGLSATDLLTYERQLAMSKMGGVHALMHHPQAPHPLKQAAAMGMG 421
           GT SNPLPPPA   +  LSA DLL YERQLA++KM        HPQA H L+QA   G+G
Sbjct: 370 GTASNPLPPPAPASVPSLSAMDLLAYERQLALAKM--------HPQAQHSLRQA---GLG 425

Query: 422 -GAAGSSQAIYDGGFQNVAAAQQLISVY 448
              AG + A+YDGG+QNVAAA Q +  Y
Sbjct: 430 VNVAGGTAAMYDGGYQNVAAAHQQLMYY 425

[Close]

BLAST of CmoCh08G007830 vs. TAIR 10
Match: AT1G54080.2 (oligouridylate-binding protein 1A )

HSP 1 Score: 614.0 bits (1582), Expect = 1.0e-175
Identity = 313/452 (69.25%), Postives = 361/452 (79.87%), Query Frame = 0


Query: 2   QHQRLKQQQQQALMQQALLQQQ-SLYHPGLLAPPQLEPIPSGNLPPGFDPSTCRSVYVGN 61
           Q Q+ +QQ QQA++QQA++QQ  SLYHPG++APPQ+EP+PSGNLPPGFDP+TCRSVY GN
Sbjct: 10  QQQQQQQQHQQAMIQQAMMQQHPSLYHPGVMAPPQMEPLPSGNLPPGFDPTTCRSVYAGN 69

Query: 62  IHTQVTEPLLQEVFGSTGLVENCKLVRKEKSSYGFIHYFDRRSAAMAILSLNGRHLFGQP 121
           IHTQVTE LLQE+F STG +E+CKL+RK+KSSYGF+HYFDRR A+MAI++LNGRH+FGQP
Sbjct: 70  IHTQVTEILLQEIFASTGPIESCKLIRKDKSSYGFVHYFDRRCASMAIMTLNGRHIFGQP 129

Query: 122 IKVNWAYASGQREDTSGHFNIFVGDLSPEVTDSTLFACFSVFPSCS----DARVMWDQKT 181
           +KVNWAYA+GQREDTS HFNIFVGDLSPEVTD+ LF  FS F SCS    DARVMWDQKT
Sbjct: 130 MKVNWAYATGQREDTSSHFNIFVGDLSPEVTDAALFDSFSAFNSCSSYYRDARVMWDQKT 189

Query: 182 GRSRGFGFVSFRNQQDAQSAINDLTGKWLGSRQIRCNWATKGAGSNEDKQSSDVKSIAEL 241
           GRSRGFGFVSFRNQQDAQ+AIN++ GKW+ SRQIRCNWATKGA   EDK SSD KS+ EL
Sbjct: 190 GRSRGFGFVSFRNQQDAQTAINEMNGKWVSSRQIRCNWATKGATFGEDKHSSDGKSVVEL 249

Query: 242 TNGSSEDGKETVNSDAPENNPQYTTVYVGNLAPEARYLILSRSLILQCLFCCLMWATQVD 301
           TNGSSEDG+E  N DAPENNPQ+TTVYVGNL+PE                      TQ+D
Sbjct: 250 TNGSSEDGRELSNEDAPENNPQFTTVYVGNLSPE---------------------VTQLD 309

Query: 302 LHRHFHALGAGVIEEVRIQRDKGFGFVRYSTHAEAALAIQMGNTQSFLCGKQIKCSWGSK 361
           LHR F+ LGAGVIEEVR+QRDKGFGFVRY+TH EAALAIQMGN Q FL  +QI+CSWG+K
Sbjct: 310 LHRLFYTLGAGVIEEVRVQRDKGFGFVRYNTHDEAALAIQMGNAQPFLFSRQIRCSWGNK 369

Query: 362 PTPPGTISNPLPPPAAVPMQGLSATDLLTYERQLAMSKMGGVHALMHHPQAPHPLKQAAA 421
           PTP GT SNPLPPPA   +  LSA DLL YERQLA++KM        HPQA H L+QA  
Sbjct: 370 PTPSGTASNPLPPPAPASVPSLSAMDLLAYERQLALAKM--------HPQAQHSLRQA-- 429

Query: 422 MGMG-GAAGSSQAIYDGGFQNVAAAQQLISVY 448
            G+G   AG + A+YDGG+QNVAAA Q +  Y
Sbjct: 430 -GLGVNVAGGTAAMYDGGYQNVAAAHQQLMYY 429

The following BLAST results are available for this feature:

BLAST of CmoCh08G007830 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
Q9LQI9	1.7e-196	77.25	Oligouridylate-binding protein 1B OS=Arabidopsis thaliana OX=3702 GN=UBP1B PE=1 ...	[more]
Q9LJH8	3.2e-190	75.95	Oligouridylate-binding protein 1C OS=Arabidopsis thaliana OX=3702 GN=UBP1C PE=1 ...	[more]
Q9SYG4	2.6e-176	69.87	Oligouridylate-binding protein 1A OS=Arabidopsis thaliana OX=3702 GN=UBP1A PE=1 ...	[more]
Q9M427	1.5e-171	71.95	Oligouridylate-binding protein 1 OS=Nicotiana plumbaginifolia OX=4092 GN=UBP1 PE...	[more]
Q6YZW2	8.2e-138	58.96	RNA-binding protein 208 OS=Oryza sativa subsp. japonica OX=39947 GN=RBP-208 PE=1...	[more]

BLAST of CmoCh08G007830 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A6J1HJ29	5.5e-238	95.05	oligouridylate-binding protein 1B-like OS=Cucurbita moschata OX=3662 GN=LOC11146...	[more]
A0A6J1KJ93	6.3e-234	94.14	oligouridylate-binding protein 1B-like OS=Cucurbita maxima OX=3661 GN=LOC1114945...	[more]
A0A6J1GPY9	2.7e-224	90.99	oligouridylate-binding protein 1B-like OS=Cucurbita moschata OX=3662 GN=LOC11145...	[more]
A0A5D3BY51	4.6e-224	91.67	Oligouridylate-binding protein 1B-like OS=Cucumis melo var. makuwa OX=1194695 GN...	[more]
A0A0A0K9E9	4.6e-224	91.67	Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_7G448800 PE=4 SV=1	[more]

BLAST of CmoCh08G007830 vs. NCBI nr


Match Name	E-value	Identity	Description
KAG7025906.1	2.4e-243	96.21	Oligouridylate-binding protein 1B [Cucurbita argyrosperma subsp. argyrosperma]	[more]
XP_022964506.1	1.1e-237	95.05	oligouridylate-binding protein 1B-like [Cucurbita moschata]	[more]
KAG6593563.1	4.3e-237	94.82	Oligouridylate-binding protein 1B, partial [Cucurbita argyrosperma subsp. sorori...	[more]
XP_023000219.1	1.3e-233	94.14	oligouridylate-binding protein 1B-like [Cucurbita maxima]	[more]
XP_038898678.1	1.5e-226	92.12	oligouridylate-binding protein 1B-like [Benincasa hispida]	[more]

BLAST of CmoCh08G007830 vs. TAIR 10


Match Name	E-value	Identity	Description
AT1G17370.1	1.2e-197	77.25	oligouridylate binding protein 1B	[more]
AT1G17370.2	2.0e-195	76.80	oligouridylate binding protein 1B	[more]
AT3G14100.1	2.3e-191	75.95	RNA-binding (RRM/RBD/RNP motifs) family protein	[more]
AT1G54080.1	1.9e-177	69.87	oligouridylate-binding protein 1A	[more]
AT1G54080.2	1.0e-175	69.25	oligouridylate-binding protein 1A	[more]

InterPro

Analysis Name: InterPro Annotations of Cucurbita moschata (Rifu) v1
Date Performed: 2021-10-25


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR000504	RNA recognition motif domain	SMART	SM00360	rrm1_1	coord: 55..124 e-value: 4.9E-16 score: 69.3 coord: 261..352 e-value: 2.1E-7 score: 40.6 coord: 140..213 e-value: 5.9E-24 score: 95.6
IPR000504	RNA recognition motif domain	PFAM	PF00076	RRM_1	coord: 293..349 e-value: 1.4E-5 score: 24.8 coord: 56..122 e-value: 2.0E-12 score: 46.7 coord: 141..211 e-value: 7.8E-18 score: 64.1
IPR000504	RNA recognition motif domain	PROSITE	PS50102	RRM	coord: 260..356 score: 12.321559
IPR000504	RNA recognition motif domain	PROSITE	PS50102	RRM	coord: 139..217 score: 17.301737
IPR000504	RNA recognition motif domain	PROSITE	PS50102	RRM	coord: 54..128 score: 15.118645
IPR003954	RNA recognition motif domain, eukaryote	SMART	SM00361	rrm2_1	coord: 140..213 e-value: 0.0043 score: 26.3
IPR012677	Nucleotide-binding alpha-beta plait domain superfamily	GENE3D	3.30.70.330		coord: 237..360 e-value: 1.9E-18 score: 68.5
IPR012677	Nucleotide-binding alpha-beta plait domain superfamily	GENE3D	3.30.70.330		coord: 136..232 e-value: 7.7E-26 score: 92.7 coord: 1..135 e-value: 4.7E-23 score: 83.6
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 236..255
None	No IPR available	PANTHER	PTHR47640:SF34	OLIGOURIDYLATE-BINDING PROTEIN 1B-LIKE ISOFORM X1	coord: 2..278
None	No IPR available	PANTHER	PTHR47640	TRNA SELENOCYSTEINE 1-ASSOCIATED PROTEIN 1-RELATED-RELATED	coord: 2..278
None	No IPR available	PANTHER	PTHR47640:SF34	OLIGOURIDYLATE-BINDING PROTEIN 1B-LIKE ISOFORM X1	coord: 293..444
None	No IPR available	PANTHER	PTHR47640	TRNA SELENOCYSTEINE 1-ASSOCIATED PROTEIN 1-RELATED-RELATED	coord: 293..444
None	No IPR available	CDD	cd12352	RRM1_TIA1_like	coord: 56..126 e-value: 3.69448E-34 score: 120.87
None	No IPR available	CDD	cd12619	RRM2_PUB1	coord: 140..214 e-value: 2.21155E-52 score: 169.225
None	No IPR available	CDD	cd12354	RRM3_TIA1_like	coord: 260..356 e-value: 1.27365E-30 score: 111.173
IPR035979	RNA-binding domain superfamily	SUPERFAMILY	54928	RNA-binding domain, RBD	coord: 38..132
IPR035979	RNA-binding domain superfamily	SUPERFAMILY	54928	RNA-binding domain, RBD	coord: 251..361
IPR035979	RNA-binding domain superfamily	SUPERFAMILY	54928	RNA-binding domain, RBD	coord: 133..219

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
CmoCh08G007830.1	CmoCh08G007830.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
molecular_function	GO:0003729	mRNA binding
molecular_function	GO:0003676	nucleic acid binding