CmoCh08G006140 (gene) Cucurbita moschata (Rifu) v1

Overview


Name	CmoCh08G006140
Type	gene
Organism	Cucurbita moschata (Cucurbita moschata (Rifu) v1)
Description	Auxin-responsive protein
Location	Cmo_Chr08: 3744759 .. 3746507 (+)
RNA-Seq Expression	CmoCh08G006140
Synteny	CmoCh08G006140

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonfive_prime_UTRCDSpolypeptidethree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

AACCCATCTTTCATCCATGGAAAAACAACCCCTTGGACTCGAGATCACCGAGCTTCGTCTCGGTCTCCCTGGCAATGGCGAAAAAAACGAGAAGAAACGAGCCTACGTTGCCATTGTAGGCAAAGATGAACCGACTAGAGACGAGATTGAGCAGAAGAATAACATGAGTAAGGGACAAGTTGTAGGGTGGCCACCAGTGTGTTCGTATCGAAGAAAGAATAGTTTTGAAGAGAAAGAGTCGTTGCATGAGAATAAGAACTCAAAAATATACGTGAAGATTAGTATGGATGGAGCTCCATTTCTTCGTAAACTTGACTTGGGTTCTCATAATGGATATTCCGGTCTTGCTCTCGCTCTTGAAAAGCTCTTTGCTTGCTTTGGAACGGGTAAATTTAGTCCTCTTTCTCGTATTTCTTTTATTTTCTCTCTTGTTTTTACGGTTTCTATAGTAATATATATAAATATTGTGATAATGTAGTGGTATGTTTGTAAAATGACAGGAAAGACATCAAAGCATGGAAAAGGTTCCGATTATGTTCCGATTTATGAAGACAAAGACGGAGATTGGATGCTTGTGGGAGACGTCCCCTGGGAGTAAGTCTACATTTTTTTAGTACAAATATACATTATTGAAATTTGGACTTCAATCTTTAGATCTACAATTAGATTTACGGTCGCTAATTTTTCTTTTTACGTAACTCAAAATTTCACTAACAATTTTAATTCATATTATTTCATTTTTTAAGAGTTGATCCCGTTTAGACCAACAAAAAATTTTGGGTTGATTGGGTTGATGGCCCAAGCAACCCGAATAGACTCTATAACCCTAAATCCAACTCAACTCTCTGTTTTCTAGTCAAGGGGTTTTTAAAAAAAAATACTTATCTATAATATTTGTTATTAACTAAAATCAAGTAAAATTTAAAAATTAAAAATTCACATATTATAACATATCATTAATATCAGTTACAGACGTTAAATATTCTCACTCTTCGTAAAAATTTTAGAAGTACGGTATGGTTAGGTTAGGTTGTAACCTTATTTTTGGGTTGGTCAGGTTGAACCGACAAAAAAAATGTCAACCCCTAAAAGTGCTCGAATTTTTCAGTTTTTCAAAAATTCAATCCAGTTCAAATCCAAAAAAATCTAATATAGATATATATATATTTATTTTTTTGGTATTACCGTTATTAACGGTGCTTAAAATTGAAGCCTCAAGTCAAAGTCAAAGTCAATTTGACATGATTGACACAAATTGCGATTAAGAATTAAGTTTTAATTAGACATTTAATTAGGAAGAAAGTGACAGAGAGGGCAAAATGGTCTTTTGATATACCCTGCCCATTCATTAACTAACACGACATGATGCCGACAGGAAGCAGACCTTAATAATAGTGTCAGCCAGATTAAAAGTTGTCCCTGAATTCAATTCCCCTTGCCCCCTCCCGACATATCCCATGCCTATAATTTAAAATCGAAGTAATCCAAATTTACATTTAATTATGATAATATTTTTCCAGGATGTTTGCCAAATCGTGCAAGAGACTGAGGATCATGAAGAGATCGGAGGCCAAAGGGTTCGGCCTGCAATTTAAGGATCTATGAGCTTAAGAAATATATTTTCCTTCATTTTTATGACTTTATTTAGCTTCAAAATAGTCGTAACAGTAATTCCCATAATTAATATTAATCGTTCAGTTTTATCGTTTATATGAAGTTTGTTTGGGTATTTTTTGTTTTAATTATTCA

mRNA sequence

AACCCATCTTTCATCCATGGAAAAACAACCCCTTGGACTCGAGATCACCGAGCTTCGTCTCGGTCTCCCTGGCAATGGCGAAAAAAACGAGAAGAAACGAGCCTACGTTGCCATTGTAGGCAAAGATGAACCGACTAGAGACGAGATTGAGCAGAAGAATAACATGAGTAAGGGACAAGTTGTAGGGTGGCCACCAGTGTGTTCGTATCGAAGAAAGAATAGTTTTGAAGAGAAAGAGTCGTTGCATGAGAATAAGAACTCAAAAATATACGTGAAGATTAGTATGGATGGAGCTCCATTTCTTCGTAAACTTGACTTGGGTTCTCATAATGGATATTCCGGTCTTGCTCTCGCTCTTGAAAAGCTCTTTGCTTGCTTTGGAACGGGAAAGACATCAAAGCATGGAAAAGGTTCCGATTATGTTCCGATTTATGAAGACAAAGACGGAGATTGGATGCTTGTGGGAGACGTCCCCTGGGAGATGTTTGCCAAATCGTGCAAGAGACTGAGGATCATGAAGAGATCGGAGGCCAAAGGGTTCGGCCTGCAATTTAAGGATCTATGAGCTTAAGAAATATATTTTCCTTCATTTTTATGACTTTATTTAGCTTCAAAATAGTCGTAACAGTAATTCCCATAATTAATATTAATCGTTCAGTTTTATCGTTTATATGAAGTTTGTTTGGGTATTTTTTGTTTTAATTATTCA

Coding sequence (CDS)

ATGGAAAAACAACCCCTTGGACTCGAGATCACCGAGCTTCGTCTCGGTCTCCCTGGCAATGGCGAAAAAAACGAGAAGAAACGAGCCTACGTTGCCATTGTAGGCAAAGATGAACCGACTAGAGACGAGATTGAGCAGAAGAATAACATGAGTAAGGGACAAGTTGTAGGGTGGCCACCAGTGTGTTCGTATCGAAGAAAGAATAGTTTTGAAGAGAAAGAGTCGTTGCATGAGAATAAGAACTCAAAAATATACGTGAAGATTAGTATGGATGGAGCTCCATTTCTTCGTAAACTTGACTTGGGTTCTCATAATGGATATTCCGGTCTTGCTCTCGCTCTTGAAAAGCTCTTTGCTTGCTTTGGAACGGGAAAGACATCAAAGCATGGAAAAGGTTCCGATTATGTTCCGATTTATGAAGACAAAGACGGAGATTGGATGCTTGTGGGAGACGTCCCCTGGGAGATGTTTGCCAAATCGTGCAAGAGACTGAGGATCATGAAGAGATCGGAGGCCAAAGGGTTCGGCCTGCAATTTAAGGATCTATGA

Protein sequence

MEKQPLGLEITELRLGLPGNGEKNEKKRAYVAIVGKDEPTRDEIEQKNNMSKGQVVGWPPVCSYRRKNSFEEKESLHENKNSKIYVKISMDGAPFLRKLDLGSHNGYSGLALALEKLFACFGTGKTSKHGKGSDYVPIYEDKDGDWMLVGDVPWEMFAKSCKRLRIMKRSEAKGFGLQFKDL

Homology

[Close]

BLAST of CmoCh08G006140 vs. ExPASy Swiss-Prot
Match: P13088 (Auxin-induced protein AUX22 OS=Glycine max OX=3847 GN=AUX22 PE=2 SV=1)

HSP 1 Score: 226.1 bits (575), Expect = 3.2e-58
Identity = 117/190 (61.58%), Postives = 138/190 (72.63%), Query Frame = 0


Query: 1   MEKQPLGLEITELRLGLPGN-------GEKNEKKRAYVAI---VGKDEPTRDEIEQKNNM 60
           M K+ LGLEITELRLGLP          +KNEKKRA+  I   VG +  +    ++K   
Sbjct: 1   MAKEGLGLEITELRLGLPDAEHQVSVVNKKNEKKRAFSEIDDGVGDENSSSGGGDRKMET 60

Query: 61  SKGQVVGWPPVCSYRRKNSFEEKESLHENKNSKIYVKISMDGAPFLRKLDLGSHNGYSGL 120
           +K QVVGWPPVCSYR+KNS  E         SK+YVK+SMDGAPFLRK+DLG H GYS L
Sbjct: 61  NKSQVVGWPPVCSYRKKNSMNEGA-------SKMYVKVSMDGAPFLRKIDLGLHKGYSDL 120

Query: 121 ALALEKLFACFGTGKTSKHGKGSDYVPIYEDKDGDWMLVGDVPWEMFAKSCKRLRIMKRS 180
           ALAL+KLF C+G  +  K+   S++VPIYEDKDGDWMLVGDVPWEMF +SCKRLRIMK+S
Sbjct: 121 ALALDKLFGCYGMVEALKNADNSEHVPIYEDKDGDWMLVGDVPWEMFMESCKRLRIMKKS 180

[Close]

BLAST of CmoCh08G006140 vs. ExPASy Swiss-Prot
Match: O24541 (Auxin-induced protein 22C OS=Vigna radiata var. radiata OX=3916 GN=AUX22C PE=2 SV=1)

HSP 1 Score: 217.2 bits (552), Expect = 1.5e-55
Identity = 109/188 (57.98%), Postives = 135/188 (71.81%), Query Frame = 0


Query: 1   MEKQPLGLEITELRLGLPGNGEKN--------EKKRAYVAIVGKDEPTRDEIEQKNNMSK 60
           MEK+ LGLEITELRLGLPG G +N         KKR +  I G++  + ++ +++   +K
Sbjct: 1   MEKEDLGLEITELRLGLPGAGGENNTDKDKNKNKKRVFSDIEGENSSSEEDGKKE---TK 60

Query: 61  GQVVGWPPVCSYRRKNSFEEKESLHENKNSKIYVKISMDGAPFLRKLDLGSHNGYSGLAL 120
            QVVGWPPVCSYR+KN+  E          K+YVK+SMDGAPFLRK+DL  H GYS LA 
Sbjct: 61  NQVVGWPPVCSYRKKNTVNE---------PKLYVKVSMDGAPFLRKIDLAMHKGYSDLAF 120

Query: 121 ALEKLFACFGTGKTSKHGKGSDYVPIYEDKDGDWMLVGDVPWEMFAKSCKRLRIMKRSEA 180
           AL+K F C+G  +  K  + +++VPIYEDKDGDWMLVGDVPWEMF +SCKRLRIMKRS+A
Sbjct: 121 ALDKFFGCYGICEALKDAENAEHVPIYEDKDGDWMLVGDVPWEMFRESCKRLRIMKRSDA 176

[Close]

BLAST of CmoCh08G006140 vs. ExPASy Swiss-Prot
Match: P32293 (Auxin-induced protein 22A OS=Vigna radiata var. radiata OX=3916 GN=AUX22A PE=2 SV=1)

HSP 1 Score: 215.7 bits (548), Expect = 4.3e-55
Identity = 114/191 (59.69%), Postives = 135/191 (70.68%), Query Frame = 0


Query: 1   MEKQPLGLEITELRLGLPG---------NGEKNEKKRAYVAI--VGKDEPTRDEIEQKNN 60
           M K+ LGLEITELRLGLP          NGEK + KR +  I  VG +  +      +  
Sbjct: 1   MAKEGLGLEITELRLGLPDAEHVAVANKNGEK-KNKRVFSEIDDVGDENSSSGGGGDRKM 60

Query: 61  MSKGQVVGWPPVCSYRRKNSFEEKESLHENKNSKIYVKISMDGAPFLRKLDLGSHNGYSG 120
            +K QVVGWPPVCSYR+KNS         N+ SK+YVK+SMDGAPFLRK+DLG H GYS 
Sbjct: 61  ENKNQVVGWPPVCSYRKKNSV--------NEASKMYVKVSMDGAPFLRKMDLGMHKGYSD 120

Query: 121 LALALEKLFACFGTGKTSKHGKGSDYVPIYEDKDGDWMLVGDVPWEMFAKSCKRLRIMKR 180
           LA ALEKLF C+G  +  K+ +  ++VPIYEDKDGDWMLVGDVPWEMF +SCKRLRIMKR
Sbjct: 121 LAFALEKLFGCYGMVEALKNVENGEHVPIYEDKDGDWMLVGDVPWEMFMESCKRLRIMKR 180

[Close]

BLAST of CmoCh08G006140 vs. ExPASy Swiss-Prot
Match: P49680 (Auxin-induced protein IAA6 OS=Pisum sativum OX=3888 GN=IAA6 PE=2 SV=1)

HSP 1 Score: 212.2 bits (539), Expect = 4.8e-54
Identity = 110/181 (60.77%), Postives = 130/181 (71.82%), Query Frame = 0


Query: 1   MEKQPLGLEITELRLGLP-GNGEKNEKKRAYVAIVGKDEPTRDEIEQKNNMSKGQVVGWP 60
           M ++ LGLEITELRLGL  G  +KNEKKR +  I G  E      ++K+   K QVVGWP
Sbjct: 1   MAREGLGLEITELRLGLSCGEPKKNEKKRMFSEIDGGVEENGGSGDRKSVDKKNQVVGWP 60

Query: 61  PVCSYRRKNSFEEKESLHENKNSKIYVKISMDGAPFLRKLDLGSHNGYSGLALALEKLFA 120
           PVCSYR+KN          N+ SK+Y+K+SMDGAP+LRK+DL  H GY  LALALEKLF 
Sbjct: 61  PVCSYRKKNM---------NEGSKMYMKVSMDGAPYLRKIDLCLHKGYLELALALEKLFD 120

Query: 121 CFGTGKTSKHGKGSDYVPIYEDKDGDWMLVGDVPWEMFAKSCKRLRIMKRSEAKGFGLQF 180
           C G  +  K  +  ++VPIYEDKDGDWMLVGDVPWEMF +SCKRLRIMKRS+AKGF LQ 
Sbjct: 121 CCGIEEALKDAENCEHVPIYEDKDGDWMLVGDVPWEMFIESCKRLRIMKRSDAKGFDLQP 172

[Close]

BLAST of CmoCh08G006140 vs. ExPASy Swiss-Prot
Match: O24409 (Auxin-responsive protein IAA19 OS=Arabidopsis thaliana OX=3702 GN=IAA19 PE=1 SV=2)

HSP 1 Score: 198.4 bits (503), Expect = 7.2e-50
Identity = 111/194 (57.22%), Postives = 127/194 (65.46%), Query Frame = 0


Query: 1   MEKQPLGLEITELRLGLPGN--GEKNEKKRAYVAI-VGKDEPTRDEIE----------QK 60
           MEK+ LGLEITELRLGLPG    EK  KKRA+  + +       D+ E          +K
Sbjct: 1   MEKEGLGLEITELRLGLPGRDVAEKMMKKRAFTEMNMTSSGSNSDQCESGVVSSGGDAEK 60

Query: 61  NNMS---KGQVVGWPPVCSYRRKNSFEEKESLHENKNSKIYVKISMDGAPFLRKLDLGSH 120
            N S   K QVVGWPPVCSYR+KNS +E  +    K    YVK+SMDG P+LRK+DLGS 
Sbjct: 61  VNDSPAAKSQVVGWPPVCSYRKKNSCKEAST---TKVGLGYVKVSMDGVPYLRKMDLGSS 120

Query: 121 NGYSGLALALEKLFACFGTGKTSKHGKGSDYVPIYEDKDGDWMLVGDVPWEMFAKSCKRL 179
            GY  LA AL+KLF   G G   K G   +YV IYEDKDGDWML GDVPW MF +SCKRL
Sbjct: 121 QGYDDLAFALDKLFGFRGIGVALKDGDNCEYVTIYEDKDGDWMLAGDVPWGMFLESCKRL 180

[Close]

BLAST of CmoCh08G006140 vs. ExPASy TrEMBL
Match: A0A6J1L0Q4 (Auxin-responsive protein OS=Cucurbita maxima OX=3661 GN=LOC111498041 PE=3 SV=1)

HSP 1 Score: 370.2 bits (949), Expect = 5.1e-99
Identity = 176/182 (96.70%), Postives = 180/182 (98.90%), Query Frame = 0


Query: 1   MEKQPLGLEITELRLGLPGNGEKNEKKRAYVAIVGKDEPTRDEIEQKNNMSKGQVVGWPP 60
           MEK+PLGLEITELRLGLPGNGEKNEKKRAYVAIVG+DEPTRD +E+KNNMSKGQVVGWPP
Sbjct: 78  MEKEPLGLEITELRLGLPGNGEKNEKKRAYVAIVGEDEPTRDNVERKNNMSKGQVVGWPP 137

Query: 61  VCSYRRKNSFEEKESLHENKNSKIYVKISMDGAPFLRKLDLGSHNGYSGLALALEKLFAC 120
           VCSYRRKNSFEEKESLHENKNSKIYVKISMDGAPFLRKLDLGSHNGYS LALALEKLFAC
Sbjct: 138 VCSYRRKNSFEEKESLHENKNSKIYVKISMDGAPFLRKLDLGSHNGYSDLALALEKLFAC 197

Query: 121 FGTGKTSKHGKGSDYVPIYEDKDGDWMLVGDVPWEMFAKSCKRLRIMKRSEAKGFGLQFK 180
           FGTGKTSKHGKGSDYVPIYEDKDGDWMLVGDVPWEMFAKSCKRLRIMKRSEAKGFGLQFK
Sbjct: 198 FGTGKTSKHGKGSDYVPIYEDKDGDWMLVGDVPWEMFAKSCKRLRIMKRSEAKGFGLQFK 257

Query: 181 DL 183
           DL
Sbjct: 258 DL 259

[Close]

BLAST of CmoCh08G006140 vs. ExPASy TrEMBL
Match: A0A6J1GPU1 (Auxin-responsive protein OS=Cucurbita moschata OX=3662 GN=LOC111456436 PE=3 SV=1)

HSP 1 Score: 320.9 bits (821), Expect = 3.5e-84
Identity = 153/183 (83.61%), Postives = 167/183 (91.26%), Query Frame = 0


Query: 1   MEKQPLGLEITELRLGLPGNGEKNEKKRAYVAIVGKDEPTRDEIEQKNN-MSKGQVVGWP 60
           M  + LGLEITELRLGLPGN +KNEKKRAY  IV +DEPTRD++++KNN  SKGQVVGWP
Sbjct: 1   MANESLGLEITELRLGLPGNNDKNEKKRAYADIVDEDEPTRDDVDRKNNTTSKGQVVGWP 60

Query: 61  PVCSYRRKNSFEEKESLHENKNSKIYVKISMDGAPFLRKLDLGSHNGYSGLALALEKLFA 120
           PVCSYR+KNSF EKESL +N+NSK+YVKISMDGAPFLRKLDLGSH GYS LA+ALEKLF 
Sbjct: 61  PVCSYRKKNSFGEKESLLKNENSKMYVKISMDGAPFLRKLDLGSHEGYSDLAVALEKLFG 120

Query: 121 CFGTGKTSKHGKGSDYVPIYEDKDGDWMLVGDVPWEMFAKSCKRLRIMKRSEAKGFGLQF 180
           CFGTGKTSKHG+ SDYVPIYEDKDGDWMLVGDVPWEMF +SCKRLRIMKRSEAKGFGLQF
Sbjct: 121 CFGTGKTSKHGESSDYVPIYEDKDGDWMLVGDVPWEMFIESCKRLRIMKRSEAKGFGLQF 180

Query: 181 KDL 183
           KDL
Sbjct: 181 KDL 183

[Close]

BLAST of CmoCh08G006140 vs. ExPASy TrEMBL
Match: A0A6J1JTD7 (Auxin-responsive protein OS=Cucurbita maxima OX=3661 GN=LOC111488703 PE=3 SV=1)

HSP 1 Score: 315.8 bits (808), Expect = 1.1e-82
Identity = 152/183 (83.06%), Postives = 164/183 (89.62%), Query Frame = 0


Query: 1   MEKQPLGLEITELRLGLPGNGEKNEKKRAYVAIVGKDEPTRDEIEQKNN-MSKGQVVGWP 60
           M  + LGLEITELRLGLPGN  KNEKKRAY  I+ +DEPTRD + +KNN  SKGQVVGWP
Sbjct: 56  MANESLGLEITELRLGLPGNNNKNEKKRAYADIIDEDEPTRDSVGRKNNTTSKGQVVGWP 115

Query: 61  PVCSYRRKNSFEEKESLHENKNSKIYVKISMDGAPFLRKLDLGSHNGYSGLALALEKLFA 120
           PVCSYR+KNSF EKESL +++N K+YVKISMDGAPFLRKLDLGSH GYS LALALEKLFA
Sbjct: 116 PVCSYRKKNSFGEKESLLKSENLKMYVKISMDGAPFLRKLDLGSHQGYSDLALALEKLFA 175

Query: 121 CFGTGKTSKHGKGSDYVPIYEDKDGDWMLVGDVPWEMFAKSCKRLRIMKRSEAKGFGLQF 180
           CFGTGKTSKHG+ SDYVPIYEDKDGDWMLVGDVPWEMF +SCKRLRIMKRSEAKGFGLQF
Sbjct: 176 CFGTGKTSKHGESSDYVPIYEDKDGDWMLVGDVPWEMFIESCKRLRIMKRSEAKGFGLQF 235

Query: 181 KDL 183
           KDL
Sbjct: 236 KDL 238

[Close]

BLAST of CmoCh08G006140 vs. ExPASy TrEMBL
Match: A0A0A0KC02 (Auxin-responsive protein OS=Cucumis sativus OX=3659 GN=Csa_7G440550 PE=3 SV=1)

HSP 1 Score: 296.2 bits (757), Expect = 9.3e-77
Identity = 151/194 (77.84%), Postives = 161/194 (82.99%), Query Frame = 0


Query: 1   MEKQPLGLEITELR--LGLPGNGEKNEKKRAYVAIV-GKDEPTRDEIEQK------NNMS 60
           M K+ LG EITELR  LGLPGN  KNEKKRA+  IV G  EPTRD  + +      N  S
Sbjct: 1   MAKESLGFEITELRLGLGLPGNSNKNEKKRAFDDIVNGDHEPTRDNDDNRVGRKNSNTTS 60

Query: 61  KGQVVGWPPVCSYRRKNSFEEKES---LHENKNSKIYVKISMDGAPFLRKLDLGSHNGYS 120
           KGQVVGWPPVCSYR++NSF EKES   LHEN+NSK+YVKISMDGAPFLRKLDLGSH GYS
Sbjct: 61  KGQVVGWPPVCSYRKRNSFGEKESSSLLHENENSKMYVKISMDGAPFLRKLDLGSHKGYS 120

Query: 121 GLALALEKLFACFGTGKTSKHGKGSDYVPIYEDKDGDWMLVGDVPWEMFAKSCKRLRIMK 180
            LALALEKLFACFGTGKT KHG+  DYVPIYEDKDGDWMLVGDVPWEMF +SCKRLRIMK
Sbjct: 121 DLALALEKLFACFGTGKTLKHGESCDYVPIYEDKDGDWMLVGDVPWEMFIESCKRLRIMK 180

Query: 181 RSEAKGFGLQFKDL 183
           RSEAKGFGLQFKDL
Sbjct: 181 RSEAKGFGLQFKDL 194

[Close]

BLAST of CmoCh08G006140 vs. ExPASy TrEMBL
Match: A0A1S3CF19 (Auxin-responsive protein OS=Cucumis melo OX=3656 GN=LOC103499752 PE=3 SV=1)

HSP 1 Score: 285.8 bits (730), Expect = 1.3e-73
Identity = 149/194 (76.80%), Postives = 163/194 (84.02%), Query Frame = 0


Query: 1   MEKQPLGLEITELR--LGLPGNGEKNEKKRAYVAIV-GKDEPTR--DEIEQKNN--MSKG 60
           M K+ LGL+ITELR  LGLPGN +KNEKKRAY  IV G  EPTR  D++ +KN+   SKG
Sbjct: 68  MAKESLGLDITELRLGLGLPGNSDKNEKKRAYNDIVNGGHEPTRDGDDVGRKNSNATSKG 127

Query: 61  QVVGWPPVCSYRRKNSFEEKESL----HENKNSKIYVKISMDGAPFLRKLDLGSHNGYSG 120
           QVVGWPPVCSYR++NSF EKES     HEN+NSK+YVKISMDGAPFLRKLDLGSH  YS 
Sbjct: 128 QVVGWPPVCSYRKRNSFGEKESSSSLPHENENSKMYVKISMDGAPFLRKLDLGSHKDYSD 187

Query: 121 LALALEKLFACFG-TGKTSKHGKGSDYVPIYEDKDGDWMLVGDVPWEMFAKSCKRLRIMK 180
           LA+ALEKLF CFG TGKT KHG+  DYVPIYEDKDGDWMLVGDVPWEMF +SCKRLRIMK
Sbjct: 188 LAVALEKLFGCFGSTGKTLKHGESCDYVPIYEDKDGDWMLVGDVPWEMFIESCKRLRIMK 247

Query: 181 RSEAKGFGLQFKDL 183
           RSEAKGFGLQFKDL
Sbjct: 248 RSEAKGFGLQFKDL 261

[Close]

BLAST of CmoCh08G006140 vs. NCBI nr
Match: XP_023004863.1 (auxin-induced protein AUX22-like [Cucurbita maxima])

HSP 1 Score: 370.2 bits (949), Expect = 1.1e-98
Identity = 176/182 (96.70%), Postives = 180/182 (98.90%), Query Frame = 0


Query: 1   MEKQPLGLEITELRLGLPGNGEKNEKKRAYVAIVGKDEPTRDEIEQKNNMSKGQVVGWPP 60
           MEK+PLGLEITELRLGLPGNGEKNEKKRAYVAIVG+DEPTRD +E+KNNMSKGQVVGWPP
Sbjct: 78  MEKEPLGLEITELRLGLPGNGEKNEKKRAYVAIVGEDEPTRDNVERKNNMSKGQVVGWPP 137

Query: 61  VCSYRRKNSFEEKESLHENKNSKIYVKISMDGAPFLRKLDLGSHNGYSGLALALEKLFAC 120
           VCSYRRKNSFEEKESLHENKNSKIYVKISMDGAPFLRKLDLGSHNGYS LALALEKLFAC
Sbjct: 138 VCSYRRKNSFEEKESLHENKNSKIYVKISMDGAPFLRKLDLGSHNGYSDLALALEKLFAC 197

Query: 121 FGTGKTSKHGKGSDYVPIYEDKDGDWMLVGDVPWEMFAKSCKRLRIMKRSEAKGFGLQFK 180
           FGTGKTSKHGKGSDYVPIYEDKDGDWMLVGDVPWEMFAKSCKRLRIMKRSEAKGFGLQFK
Sbjct: 198 FGTGKTSKHGKGSDYVPIYEDKDGDWMLVGDVPWEMFAKSCKRLRIMKRSEAKGFGLQFK 257

Query: 181 DL 183
           DL
Sbjct: 258 DL 259

[Close]

BLAST of CmoCh08G006140 vs. NCBI nr
Match: XP_023514526.1 (auxin-induced protein AUX22-like [Cucurbita pepo subsp. pepo])

HSP 1 Score: 368.6 bits (945), Expect = 3.1e-98
Identity = 175/182 (96.15%), Postives = 178/182 (97.80%), Query Frame = 0


Query: 1   MEKQPLGLEITELRLGLPGNGEKNEKKRAYVAIVGKDEPTRDEIEQKNNMSKGQVVGWPP 60
           MEKQPLGLEITELRLGLPGNGEKNEKKRAYVAI G+DEPTRDE+E+KNNMSKGQVVGWPP
Sbjct: 77  MEKQPLGLEITELRLGLPGNGEKNEKKRAYVAIAGEDEPTRDEVERKNNMSKGQVVGWPP 136

Query: 61  VCSYRRKNSFEEKESLHENKNSKIYVKISMDGAPFLRKLDLGSHNGYSGLALALEKLFAC 120
           VCSYRRKNSFEEKESLHENKNSKIYVKISMDGAPFLRKLDLGSHNGYS LALALEKLFAC
Sbjct: 137 VCSYRRKNSFEEKESLHENKNSKIYVKISMDGAPFLRKLDLGSHNGYSDLALALEKLFAC 196

Query: 121 FGTGKTSKHGKGSDYVPIYEDKDGDWMLVGDVPWEMFAKSCKRLRIMKRSEAKGFGLQFK 180
           FGTGKTSKHGKGSDYVPIYEDKDGDWM VGDVPWEMFAKSCKRLRIMKRSE KGFGLQFK
Sbjct: 197 FGTGKTSKHGKGSDYVPIYEDKDGDWMFVGDVPWEMFAKSCKRLRIMKRSEVKGFGLQFK 256

Query: 181 DL 183
           DL
Sbjct: 257 DL 258

[Close]

BLAST of CmoCh08G006140 vs. NCBI nr
Match: KAG6593402.1 (Auxin-induced protein AUX22, partial [Cucurbita argyrosperma subsp. sororia])

HSP 1 Score: 367.5 bits (942), Expect = 6.8e-98
Identity = 174/182 (95.60%), Postives = 180/182 (98.90%), Query Frame = 0


Query: 1   MEKQPLGLEITELRLGLPGNGEKNEKKRAYVAIVGKDEPTRDEIEQKNNMSKGQVVGWPP 60
           MEKQPLGLEITELRLGLPGNG+KNEKKRAYVAIVG+DEPTRD++E+KNNM+KGQVVGWPP
Sbjct: 1   MEKQPLGLEITELRLGLPGNGQKNEKKRAYVAIVGEDEPTRDDVERKNNMNKGQVVGWPP 60

Query: 61  VCSYRRKNSFEEKESLHENKNSKIYVKISMDGAPFLRKLDLGSHNGYSGLALALEKLFAC 120
           VCSYRRKNSFEEKESLHENKNSKIYVKISMDGAPFLRKLDLGSHNGYS LALALEKLFAC
Sbjct: 61  VCSYRRKNSFEEKESLHENKNSKIYVKISMDGAPFLRKLDLGSHNGYSDLALALEKLFAC 120

Query: 121 FGTGKTSKHGKGSDYVPIYEDKDGDWMLVGDVPWEMFAKSCKRLRIMKRSEAKGFGLQFK 180
           FGT KTSKHGKGSDYVPIYEDKDGDWMLVGDVPWEMFAKSCKRLRIMKRSEAKGFGLQFK
Sbjct: 121 FGTAKTSKHGKGSDYVPIYEDKDGDWMLVGDVPWEMFAKSCKRLRIMKRSEAKGFGLQFK 180

Query: 181 DL 183
           DL
Sbjct: 181 DL 182

[Close]

BLAST of CmoCh08G006140 vs. NCBI nr
Match: KAG7025749.1 (Auxin-induced protein AUX22 [Cucurbita argyrosperma subsp. argyrosperma])

HSP 1 Score: 364.0 bits (933), Expect = 7.5e-97
Identity = 173/182 (95.05%), Postives = 179/182 (98.35%), Query Frame = 0


Query: 1   MEKQPLGLEITELRLGLPGNGEKNEKKRAYVAIVGKDEPTRDEIEQKNNMSKGQVVGWPP 60
           MEKQPLGLEITELRLGLPGNG+KNEKKRAYVAIVG+DEPTRD++E+KNNM+KGQVVGWPP
Sbjct: 1   MEKQPLGLEITELRLGLPGNGQKNEKKRAYVAIVGEDEPTRDDVERKNNMNKGQVVGWPP 60

Query: 61  VCSYRRKNSFEEKESLHENKNSKIYVKISMDGAPFLRKLDLGSHNGYSGLALALEKLFAC 120
           VCSYRRKNSFEEKESLHENKNSKIYVKISMDGAPFLRKLDLGSHNGYS LALALEKLFAC
Sbjct: 61  VCSYRRKNSFEEKESLHENKNSKIYVKISMDGAPFLRKLDLGSHNGYSDLALALEKLFAC 120

Query: 121 FGTGKTSKHGKGSDYVPIYEDKDGDWMLVGDVPWEMFAKSCKRLRIMKRSEAKGFGLQFK 180
           FGT KTSKH KGSDYVPIYEDKDGDWMLVGDVPWEMFAKSCKRLRIMKRSEAKGFGLQFK
Sbjct: 121 FGTAKTSKHVKGSDYVPIYEDKDGDWMLVGDVPWEMFAKSCKRLRIMKRSEAKGFGLQFK 180

Query: 181 DL 183
           DL
Sbjct: 181 DL 182

[Close]

BLAST of CmoCh08G006140 vs. NCBI nr
Match: KAG7014105.1 (Auxin-induced protein AUX22, partial [Cucurbita argyrosperma subsp. argyrosperma])

HSP 1 Score: 320.9 bits (821), Expect = 7.3e-84
Identity = 154/183 (84.15%), Postives = 167/183 (91.26%), Query Frame = 0


Query: 1   MEKQPLGLEITELRLGLPGNGEKNEKKRAYVAIVGKDEPTRDEIEQKNN-MSKGQVVGWP 60
           M  + LGLEITELRLGLPGN +KNEKKRAY  IV +DEPTRD++ +KNN  SKGQVVGWP
Sbjct: 56  MANESLGLEITELRLGLPGNNDKNEKKRAYADIVDEDEPTRDDVGRKNNTTSKGQVVGWP 115

Query: 61  PVCSYRRKNSFEEKESLHENKNSKIYVKISMDGAPFLRKLDLGSHNGYSGLALALEKLFA 120
           PVCSYR+KNSF EKESL +N+NSK+YVKISMDGAPFLRKLDLGSH GYS LA+ALEKLFA
Sbjct: 116 PVCSYRKKNSFGEKESLLKNENSKMYVKISMDGAPFLRKLDLGSHEGYSDLAVALEKLFA 175

Query: 121 CFGTGKTSKHGKGSDYVPIYEDKDGDWMLVGDVPWEMFAKSCKRLRIMKRSEAKGFGLQF 180
           CFGTGKTSKHG+ SDYVPIYEDKDGDWMLVGDVPWEMF +SCKRLRIMKRSEAKGFGLQF
Sbjct: 176 CFGTGKTSKHGESSDYVPIYEDKDGDWMLVGDVPWEMFMESCKRLRIMKRSEAKGFGLQF 235

Query: 181 KDL 183
           KDL
Sbjct: 236 KDL 238

[Close]

BLAST of CmoCh08G006140 vs. TAIR 10
Match: AT3G15540.1 (indole-3-acetic acid inducible 19 )

HSP 1 Score: 198.4 bits (503), Expect = 5.1e-51
Identity = 111/194 (57.22%), Postives = 127/194 (65.46%), Query Frame = 0


Query: 1   MEKQPLGLEITELRLGLPGN--GEKNEKKRAYVAI-VGKDEPTRDEIE----------QK 60
           MEK+ LGLEITELRLGLPG    EK  KKRA+  + +       D+ E          +K
Sbjct: 1   MEKEGLGLEITELRLGLPGRDVAEKMMKKRAFTEMNMTSSGSNSDQCESGVVSSGGDAEK 60

Query: 61  NNMS---KGQVVGWPPVCSYRRKNSFEEKESLHENKNSKIYVKISMDGAPFLRKLDLGSH 120
            N S   K QVVGWPPVCSYR+KNS +E  +    K    YVK+SMDG P+LRK+DLGS 
Sbjct: 61  VNDSPAAKSQVVGWPPVCSYRKKNSCKEAST---TKVGLGYVKVSMDGVPYLRKMDLGSS 120

Query: 121 NGYSGLALALEKLFACFGTGKTSKHGKGSDYVPIYEDKDGDWMLVGDVPWEMFAKSCKRL 179
            GY  LA AL+KLF   G G   K G   +YV IYEDKDGDWML GDVPW MF +SCKRL
Sbjct: 121 QGYDDLAFALDKLFGFRGIGVALKDGDNCEYVTIYEDKDGDWMLAGDVPWGMFLESCKRL 180

[Close]

BLAST of CmoCh08G006140 vs. TAIR 10
Match: AT1G52830.1 (indole-3-acetic acid 6 )

HSP 1 Score: 182.2 bits (461), Expect = 3.8e-46
Identity = 102/199 (51.26%), Postives = 121/199 (60.80%), Query Frame = 0


Query: 1   MEKQPLGLEITELRLGLPGN--------GEKNEKKRAYVAIVGKDEPTRDEIEQKNNMS- 60
           M K+ L LEITELRLGLPG+        G   +KKR     V  D  T   ++ +N  S 
Sbjct: 1   MAKEGLALEITELRLGLPGDNYSEISVCGSSKKKKR-----VLSDMMTSSALDTENENSV 60

Query: 61  ------------KGQVVGWPPVCSYRRKNSFEEKESLHENKNSKIYVKISMDGAPFLRKL 120
                       K Q VGWPPVCSYRRK + EE         +  YVK+SMDG P++RK+
Sbjct: 61  VSSVEDESLPVVKSQAVGWPPVCSYRRKKNNEEA------SKAIGYVKVSMDGVPYMRKI 120

Query: 121 DLGSHNGYSGLALALEKLFACFGTGKTSKHGKGSDYVPIYEDKDGDWMLVGDVPWEMFAK 179
           DLGS N Y  L   LE LF C G G  +K GK  +Y+ IYEDKD DWMLVGDVPW+MF +
Sbjct: 121 DLGSSNSYINLVTVLENLFGCLGIG-VAKEGKKCEYIIIYEDKDRDWMLVGDVPWQMFKE 180

[Close]

BLAST of CmoCh08G006140 vs. TAIR 10
Match: AT1G04240.1 (AUX/IAA transcriptional regulator family protein )

HSP 1 Score: 169.9 bits (429), Expect = 1.9e-42
Identity = 94/184 (51.09%), Postives = 117/184 (63.59%), Query Frame = 0


Query: 6   LGLEITELRLGLPGNGEKNEKKRAYVAIVGKDE-----PTRDEIEQKNNMS------KGQ 65
           + L+ TELRLGLPG     E K         ++      T  EIE  +  +      K Q
Sbjct: 5   VNLKETELRLGLPGTDNVCEAKERVSCCNNNNKRVLSTDTEKEIESSSRKTETSPPRKAQ 64

Query: 66  VVGWPPVCSYRRKNSFEEKESLHENKNSKIYVKISMDGAPFLRKLDLGSHNGYSGLALAL 125
           +VGWPPV SY RKN+ + K++  E++   IYVK+SMDGAP+LRK+DL  + GYS L  AL
Sbjct: 65  IVGWPPVRSY-RKNNIQSKKNESEHEGQGIYVKVSMDGAPYLRKIDLSCYKGYSELLKAL 124

Query: 126 EKLFACFGTGKTSKHG--KGSDYVPIYEDKDGDWMLVGDVPWEMFAKSCKRLRIMKRSEA 177
           E +F  F  G+  +    KGSD+VP YEDKDGDWML+GDVPWEMF  +CKRLRIMK SEA
Sbjct: 125 EVMFK-FSVGEYFERDGYKGSDFVPTYEDKDGDWMLIGDVPWEMFICTCKRLRIMKGSEA 184

[Close]

BLAST of CmoCh08G006140 vs. TAIR 10
Match: AT1G15580.1 (indole-3-acetic acid inducible 5 )

HSP 1 Score: 166.4 bits (420), Expect = 2.1e-41
Identity = 101/180 (56.11%), Postives = 114/180 (63.33%), Query Frame = 0


Query: 2   EKQPLGLEITELRLGLPG----NGEK-NEKKRA--YVAIVGKDEPTRDEIEQKNNMSKGQ 61
           E   LGLEITELRLGLPG    +GE  + KKRA   V I  K EP +          K Q
Sbjct: 4   ESNNLGLEITELRLGLPGDIVVSGESISGKKRASPEVEIDLKCEPAK----------KSQ 63

Query: 62  VVGWPPVCSYRRKNSFEEKESLHENKNSKIYVKISMDGAPFLRKLDLGSHNGYSGLALAL 121
           VVGWPPVCSYRRKNS E  +S         YVK+S+DGA FLRK+DL  +  Y  LA AL
Sbjct: 64  VVGWPPVCSYRRKNSLERTKS--------SYVKVSVDGAAFLRKIDLEMYKCYQDLASAL 123

Query: 122 EKLFACFGTGKTSKHGKGSDYVPIYEDKDGDWMLVGDVPWEMFAKSCKRLRIMKRSEAKG 175
           + LF C+     +   K S+ VPIYEDKDGDWML GDVPWEMF  SCKRLRIMKRS  +G
Sbjct: 124 QILFGCYINFDDTL--KESECVPIYEDKDGDWMLAGDVPWEMFLGSCKRLRIMKRSCNRG 163

[Close]

BLAST of CmoCh08G006140 vs. TAIR 10
Match: AT5G43700.1 (AUX/IAA transcriptional regulator family protein )

HSP 1 Score: 162.2 bits (409), Expect = 4.0e-40
Identity = 93/178 (52.25%), Postives = 114/178 (64.04%), Query Frame = 0


Query: 6   LGLEITELRLGLPGNGEKNEKKRAYVAIVGKDEPTRDEIEQKNNMS-----KGQVVGWPP 65
           + L+ TELRLGLPG  E     ++   ++   E T  EIE           K Q+VGWPP
Sbjct: 11  VNLKATELRLGLPGTEETVSCGKSNKRVL--PEATEKEIESTGKTETASPPKAQIVGWPP 70

Query: 66  VCSYRRKNSFEEKESLHENKNSKIYVKISMDGAPFLRKLDLGSHNGYSGLALALEKLFAC 125
           V SY RKN+ + K+S  E + +  YVK+SMDGAP+LRK+DL  +  Y  L  +LE +F  
Sbjct: 71  VRSY-RKNNVQTKKSESEGQGN--YVKVSMDGAPYLRKIDLTMYKQYPELMKSLENMFK- 130

Query: 126 FGTGK-TSKHG-KGSDYVPIYEDKDGDWMLVGDVPWEMFAKSCKRLRIMKRSEAKGFG 177
           F  G+   + G KGSD+VP YEDKDGDWMLVGDVPWEMF  SCKRLRIMK SE KG G
Sbjct: 131 FSVGEYFEREGYKGSDFVPTYEDKDGDWMLVGDVPWEMFVSSCKRLRIMKGSEVKGLG 182

The following BLAST results are available for this feature:

BLAST of CmoCh08G006140 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
P13088	3.2e-58	61.58	Auxin-induced protein AUX22 OS=Glycine max OX=3847 GN=AUX22 PE=2 SV=1	[more]
O24541	1.5e-55	57.98	Auxin-induced protein 22C OS=Vigna radiata var. radiata OX=3916 GN=AUX22C PE=2 S...	[more]
P32293	4.3e-55	59.69	Auxin-induced protein 22A OS=Vigna radiata var. radiata OX=3916 GN=AUX22A PE=2 S...	[more]
P49680	4.8e-54	60.77	Auxin-induced protein IAA6 OS=Pisum sativum OX=3888 GN=IAA6 PE=2 SV=1	[more]
O24409	7.2e-50	57.22	Auxin-responsive protein IAA19 OS=Arabidopsis thaliana OX=3702 GN=IAA19 PE=1 SV=...	[more]

BLAST of CmoCh08G006140 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A6J1L0Q4	5.1e-99	96.70	Auxin-responsive protein OS=Cucurbita maxima OX=3661 GN=LOC111498041 PE=3 SV=1	[more]
A0A6J1GPU1	3.5e-84	83.61	Auxin-responsive protein OS=Cucurbita moschata OX=3662 GN=LOC111456436 PE=3 SV=1	[more]
A0A6J1JTD7	1.1e-82	83.06	Auxin-responsive protein OS=Cucurbita maxima OX=3661 GN=LOC111488703 PE=3 SV=1	[more]
A0A0A0KC02	9.3e-77	77.84	Auxin-responsive protein OS=Cucumis sativus OX=3659 GN=Csa_7G440550 PE=3 SV=1	[more]
A0A1S3CF19	1.3e-73	76.80	Auxin-responsive protein OS=Cucumis melo OX=3656 GN=LOC103499752 PE=3 SV=1	[more]

BLAST of CmoCh08G006140 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_023004863.1	1.1e-98	96.70	auxin-induced protein AUX22-like [Cucurbita maxima]	[more]
XP_023514526.1	3.1e-98	96.15	auxin-induced protein AUX22-like [Cucurbita pepo subsp. pepo]	[more]
KAG6593402.1	6.8e-98	95.60	Auxin-induced protein AUX22, partial [Cucurbita argyrosperma subsp. sororia]	[more]
KAG7025749.1	7.5e-97	95.05	Auxin-induced protein AUX22 [Cucurbita argyrosperma subsp. argyrosperma]	[more]
KAG7014105.1	7.3e-84	84.15	Auxin-induced protein AUX22, partial [Cucurbita argyrosperma subsp. argyrosperma...	[more]

BLAST of CmoCh08G006140 vs. TAIR 10


Match Name	E-value	Identity	Description
AT3G15540.1	5.1e-51	57.22	indole-3-acetic acid inducible 19	[more]
AT1G52830.1	3.8e-46	51.26	indole-3-acetic acid 6	[more]
AT1G04240.1	1.9e-42	51.09	AUX/IAA transcriptional regulator family protein	[more]
AT1G15580.1	2.1e-41	56.11	indole-3-acetic acid inducible 5	[more]
AT5G43700.1	4.0e-40	52.25	AUX/IAA transcriptional regulator family protein	[more]

InterPro

Analysis Name: InterPro Annotations of Cucurbita moschata (Rifu) v1
Date Performed: 2021-10-25


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR033389	AUX/IAA domain	PFAM	PF02309	AUX_IAA	coord: 42..175 e-value: 1.2E-51 score: 175.9
None	No IPR available	GENE3D	3.10.20.90		coord: 77..180 e-value: 5.1E-39 score: 134.4
None	No IPR available	PANTHER	PTHR31734:SF87	AUXIN-RESPONSIVE PROTEIN IAA6	coord: 4..175
None	No IPR available	SUPERFAMILY	54277	CAD & PB1 domains	coord: 76..168
IPR003311	AUX/IAA protein	PANTHER	PTHR31734	AUXIN-RESPONSIVE PROTEIN IAA17	coord: 4..175
IPR000270	PB1 domain	PROSITE	PS51745	PB1	coord: 83..171 score: 24.009562

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
CmoCh08G006140.1	CmoCh08G006140.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0009734	auxin-activated signaling pathway
biological_process	GO:0006355	regulation of transcription, DNA-templated
cellular_component	GO:0016021	integral component of membrane
cellular_component	GO:0005634	nucleus
molecular_function	GO:0005515	protein binding