CmoCh08G005540 (gene) Cucurbita moschata (Rifu) v1

Overview


Name	CmoCh08G005540
Type	gene
Organism	Cucurbita moschata (Cucurbita moschata (Rifu) v1)
Description	Oxidoreductase/transition metal ion-binding protein
Location	Cmo_Chr08: 3406432 .. 3406797 (-)
RNA-Seq Expression	CmoCh08G005540
Synteny	CmoCh08G005540

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDSpolypeptide

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGGCTGCCAACGGAGGCTCCTCCGCCGCAAATTCCCACTCTCAGCCCACTTTCCCTCTTCATCTCTGCTTCTTCTTCCTCATCCTCCTCATGTTCTTGTCCTTCTCTTGGTACTCCAATTACGAGTCGGTTGTCGAAGGCGTCTTTGATCAACTCAAGCTTCTTCTCATCGTCTCGCCGCTCCTCCTCCTCCTCCTCGTCCACTGGCTCTCCAACGCCGGAAACTTTCTTTTACCGGAAAAAGACTCGCTCCACCACGCCGGTGGGACGCCATGGGGCGTCGGGTTCTTGTTGGTTCTTCTCCTTTTCATGATCTCGTACCAGTCCTACTTCCAAGAACGGTGGTTTCCTCTATTGAGCCGGTGA

mRNA sequence

ATGGCTGCCAACGGAGGCTCCTCCGCCGCAAATTCCCACTCTCAGCCCACTTTCCCTCTTCATCTCTGCTTCTTCTTCCTCATCCTCCTCATGTTCTTGTCCTTCTCTTGGTACTCCAATTACGAGTCGGTTGTCGAAGGCGTCTTTGATCAACTCAAGCTTCTTCTCATCGTCTCGCCGCTCCTCCTCCTCCTCCTCGTCCACTGGCTCTCCAACGCCGGAAACTTTCTTTTACCGGAAAAAGACTCGCTCCACCACGCCGGTGGGACGCCATGGGGCGTCGGGTTCTTGTTGGTTCTTCTCCTTTTCATGATCTCGTACCAGTCCTACTTCCAAGAACGGTGGTTTCCTCTATTGAGCCGGTGA

Coding sequence (CDS)

ATGGCTGCCAACGGAGGCTCCTCCGCCGCAAATTCCCACTCTCAGCCCACTTTCCCTCTTCATCTCTGCTTCTTCTTCCTCATCCTCCTCATGTTCTTGTCCTTCTCTTGGTACTCCAATTACGAGTCGGTTGTCGAAGGCGTCTTTGATCAACTCAAGCTTCTTCTCATCGTCTCGCCGCTCCTCCTCCTCCTCCTCGTCCACTGGCTCTCCAACGCCGGAAACTTTCTTTTACCGGAAAAAGACTCGCTCCACCACGCCGGTGGGACGCCATGGGGCGTCGGGTTCTTGTTGGTTCTTCTCCTTTTCATGATCTCGTACCAGTCCTACTTCCAAGAACGGTGGTTTCCTCTATTGAGCCGGTGA

Protein sequence

MAANGGSSAANSHSQPTFPLHLCFFFLILLMFLSFSWYSNYESVVEGVFDQLKLLLIVSPLLLLLLVHWLSNAGNFLLPEKDSLHHAGGTPWGVGFLLVLLLFMISYQSYFQERWFPLLSR

Homology

[Close]

BLAST of CmoCh08G005540 vs. ExPASy TrEMBL
Match: A0A6J1H718 (uncharacterized protein LOC111460692 OS=Cucurbita moschata OX=3662 GN=LOC111460692 PE=4 SV=1)

HSP 1 Score: 245.0 bits (624), Expect = 1.6e-61
Identity = 121/121 (100.00%), Postives = 121/121 (100.00%), Query Frame = 0


Query: 1   MAANGGSSAANSHSQPTFPLHLCFFFLILLMFLSFSWYSNYESVVEGVFDQLKLLLIVSP 60
           MAANGGSSAANSHSQPTFPLHLCFFFLILLMFLSFSWYSNYESVVEGVFDQLKLLLIVSP
Sbjct: 1   MAANGGSSAANSHSQPTFPLHLCFFFLILLMFLSFSWYSNYESVVEGVFDQLKLLLIVSP 60

Query: 61  LLLLLLVHWLSNAGNFLLPEKDSLHHAGGTPWGVGFLLVLLLFMISYQSYFQERWFPLLS 120
           LLLLLLVHWLSNAGNFLLPEKDSLHHAGGTPWGVGFLLVLLLFMISYQSYFQERWFPLLS
Sbjct: 61  LLLLLLVHWLSNAGNFLLPEKDSLHHAGGTPWGVGFLLVLLLFMISYQSYFQERWFPLLS 120

Query: 121 R 122
           R
Sbjct: 121 R 121

[Close]

BLAST of CmoCh08G005540 vs. ExPASy TrEMBL
Match: A0A6J1JW83 (uncharacterized protein LOC111488435 OS=Cucurbita maxima OX=3661 GN=LOC111488435 PE=4 SV=1)

HSP 1 Score: 205.3 bits (521), Expect = 1.4e-49
Identity = 103/127 (81.10%), Postives = 108/127 (85.04%), Query Frame = 0


Query: 1   MAANGGSSAANSHSQPTFPLHLCFFFLILLMFLSFSWYSNYESVVEGVFDQLKLLLIVSP 60
           MA NG SS  NS SQPTFPLHLCFFFLIL MFL+FSWYS YES VEGVFDQLKLLLI+SP
Sbjct: 1   MAVNGDSSTTNSDSQPTFPLHLCFFFLILFMFLAFSWYSTYESAVEGVFDQLKLLLIISP 60

Query: 61  LLLLLLVHWLSNAGN------FLLPEKDSLHHAGGTPWGVGFLLVLLLFMISYQSYFQER 120
           LLLLLLVHWLSN  N        LPEKDSLH AGGTPWGVGF+LV+LLFMISYQSYFQER
Sbjct: 61  LLLLLLVHWLSNGENGRLPPLVPLPEKDSLHRAGGTPWGVGFMLVILLFMISYQSYFQER 120

Query: 121 WFPLLSR 122
           WFP+LSR
Sbjct: 121 WFPMLSR 127

[Close]

BLAST of CmoCh08G005540 vs. ExPASy TrEMBL
Match: A0A6J1GPN5 (uncharacterized protein LOC111456323 OS=Cucurbita moschata OX=3662 GN=LOC111456323 PE=4 SV=1)

HSP 1 Score: 203.8 bits (517), Expect = 4.2e-49
Identity = 103/127 (81.10%), Postives = 109/127 (85.83%), Query Frame = 0


Query: 1   MAANGGSSAANSHSQPTFPLHLCFFFLILLMFLSFSWYSNYESVVEGVFDQLKLLLIVSP 60
           MA NG SS +NS SQPTFPLHLCFFFLIL MFL+FSW+S YES VEGVFDQLKLLLIVSP
Sbjct: 1   MAVNGDSSTSNSDSQPTFPLHLCFFFLILFMFLAFSWHSTYESAVEGVFDQLKLLLIVSP 60

Query: 61  LLLLLLVHWLSNAGN------FLLPEKDSLHHAGGTPWGVGFLLVLLLFMISYQSYFQER 120
           LLLLLL+HWLSN  N        LPEKDSLH AGGTPWGVGF+LV+LLFMISYQSYFQER
Sbjct: 61  LLLLLLLHWLSNGENGRLPPLVPLPEKDSLHRAGGTPWGVGFMLVILLFMISYQSYFQER 120

Query: 121 WFPLLSR 122
           WFPLLSR
Sbjct: 121 WFPLLSR 127

[Close]

BLAST of CmoCh08G005540 vs. ExPASy TrEMBL
Match: A0A0A0K9W6 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_7G429630 PE=4 SV=1)

HSP 1 Score: 202.2 bits (513), Expect = 1.2e-48
Identity = 102/118 (86.44%), Postives = 105/118 (88.98%), Query Frame = 0


Query: 10  ANSHSQPTFPLHLCFFFLILLMFLSFSWYSNYESVVEGVFDQLKLLLIVSPLLLLLLVHW 69
           AN+HSQPTFPLHLCFFFLILLMFLSFSWYSNYES VE VFDQLKLLLIVSPLLLLLLVHW
Sbjct: 2   ANTHSQPTFPLHLCFFFLILLMFLSFSWYSNYESAVEDVFDQLKLLLIVSPLLLLLLVHW 61

Query: 70  LSNAGN------FLLPEKDSLHHAGGTPWGVGFLLVLLLFMISYQSYFQERWFPLLSR 122
           LSN  +        LPEKDSLH AGGTPWGVGFLLVLLLFM+SYQSYFQERWFPLLSR
Sbjct: 62  LSNTKSGHLPSLIPLPEKDSLHRAGGTPWGVGFLLVLLLFMVSYQSYFQERWFPLLSR 119

[Close]

BLAST of CmoCh08G005540 vs. ExPASy TrEMBL
Match: A0A1S3CE82 (uncharacterized protein LOC103499879 OS=Cucumis melo OX=3656 GN=LOC103499879 PE=4 SV=1)

HSP 1 Score: 199.1 bits (505), Expect = 1.0e-47
Identity = 102/119 (85.71%), Postives = 103/119 (86.55%), Query Frame = 0


Query: 9   AANSHSQPTFPLHLCFFFLILLMFLSFSWYSNYESVVEGVFDQLKLLLIVSPLLLLLLVH 68
           A   HSQPTFPLHLCFFFLILLMFLSFSWYSNYES VE VFDQLKLLLIVSPLLLLLLVH
Sbjct: 2   ANTGHSQPTFPLHLCFFFLILLMFLSFSWYSNYESAVEDVFDQLKLLLIVSPLLLLLLVH 61

Query: 69  WLSNAGN------FLLPEKDSLHHAGGTPWGVGFLLVLLLFMISYQSYFQERWFPLLSR 122
           WLSN  N        LPEK+SLH AGGTPWGVGFLLVLLLFMISYQSYFQERWFPLLSR
Sbjct: 62  WLSNTKNGHLPSLIPLPEKNSLHRAGGTPWGVGFLLVLLLFMISYQSYFQERWFPLLSR 120

[Close]

BLAST of CmoCh08G005540 vs. NCBI nr
Match: XP_022959695.1 (uncharacterized protein LOC111460692 [Cucurbita moschata])

HSP 1 Score: 245.0 bits (624), Expect = 3.4e-61
Identity = 121/121 (100.00%), Postives = 121/121 (100.00%), Query Frame = 0


Query: 1   MAANGGSSAANSHSQPTFPLHLCFFFLILLMFLSFSWYSNYESVVEGVFDQLKLLLIVSP 60
           MAANGGSSAANSHSQPTFPLHLCFFFLILLMFLSFSWYSNYESVVEGVFDQLKLLLIVSP
Sbjct: 1   MAANGGSSAANSHSQPTFPLHLCFFFLILLMFLSFSWYSNYESVVEGVFDQLKLLLIVSP 60

Query: 61  LLLLLLVHWLSNAGNFLLPEKDSLHHAGGTPWGVGFLLVLLLFMISYQSYFQERWFPLLS 120
           LLLLLLVHWLSNAGNFLLPEKDSLHHAGGTPWGVGFLLVLLLFMISYQSYFQERWFPLLS
Sbjct: 61  LLLLLLVHWLSNAGNFLLPEKDSLHHAGGTPWGVGFLLVLLLFMISYQSYFQERWFPLLS 120

Query: 121 R 122
           R
Sbjct: 121 R 121

[Close]

BLAST of CmoCh08G005540 vs. NCBI nr
Match: KAG6593338.1 (hypothetical protein SDJN03_12814, partial [Cucurbita argyrosperma subsp. sororia])

HSP 1 Score: 240.4 bits (612), Expect = 8.4e-60
Identity = 119/121 (98.35%), Postives = 119/121 (98.35%), Query Frame = 0


Query: 1   MAANGGSSAANSHSQPTFPLHLCFFFLILLMFLSFSWYSNYESVVEGVFDQLKLLLIVSP 60
           MAANGGSSAANSHSQPTFPLHLCFFFLILLMFLSFSWYSNYES VEGVFDQLKLLLIVSP
Sbjct: 1   MAANGGSSAANSHSQPTFPLHLCFFFLILLMFLSFSWYSNYESAVEGVFDQLKLLLIVSP 60

Query: 61  LLLLLLVHWLSNAGNFLLPEKDSLHHAGGTPWGVGFLLVLLLFMISYQSYFQERWFPLLS 120
           LLLLLLVHWLSNAGNFLLPEKDSLH AGGTPWGVGFLLVLLLFMISYQSYFQERWFPLLS
Sbjct: 61  LLLLLLVHWLSNAGNFLLPEKDSLHRAGGTPWGVGFLLVLLLFMISYQSYFQERWFPLLS 120

Query: 121 R 122
           R
Sbjct: 121 R 121

[Close]

BLAST of CmoCh08G005540 vs. NCBI nr
Match: XP_023514532.1 (uncharacterized protein LOC111778789 [Cucurbita pepo subsp. pepo])

HSP 1 Score: 238.4 bits (607), Expect = 3.2e-59
Identity = 117/121 (96.69%), Postives = 118/121 (97.52%), Query Frame = 0


Query: 1   MAANGGSSAANSHSQPTFPLHLCFFFLILLMFLSFSWYSNYESVVEGVFDQLKLLLIVSP 60
           MAANGGSSAANSHSQPTFPLHLCFFFLILLMFLSFSWYSNYES VEGVFDQLKLLLI+SP
Sbjct: 1   MAANGGSSAANSHSQPTFPLHLCFFFLILLMFLSFSWYSNYESAVEGVFDQLKLLLIISP 60

Query: 61  LLLLLLVHWLSNAGNFLLPEKDSLHHAGGTPWGVGFLLVLLLFMISYQSYFQERWFPLLS 120
           LLLLL VHWLSNAGNFLLPEKDSLH AGGTPWGVGFLLVLLLFMISYQSYFQERWFPLLS
Sbjct: 61  LLLLLFVHWLSNAGNFLLPEKDSLHRAGGTPWGVGFLLVLLLFMISYQSYFQERWFPLLS 120

Query: 121 R 122
           R
Sbjct: 121 R 121

[Close]

BLAST of CmoCh08G005540 vs. NCBI nr
Match: XP_038898802.1 (uncharacterized protein LOC120086305 [Benincasa hispida])

HSP 1 Score: 217.6 bits (553), Expect = 5.8e-53
Identity = 111/127 (87.40%), Postives = 114/127 (89.76%), Query Frame = 0


Query: 1   MAANGGSSAANSHSQPTFPLHLCFFFLILLMFLSFSWYSNYESVVEGVFDQLKLLLIVSP 60
           MA+N GSSAANSHSQPTFPLHLCFFFLILLMFLSFSWYSNYES VEGVFDQLKLLLIVSP
Sbjct: 1   MASNEGSSAANSHSQPTFPLHLCFFFLILLMFLSFSWYSNYESAVEGVFDQLKLLLIVSP 60

Query: 61  LLLLLLVHWLSNAGN------FLLPEKDSLHHAGGTPWGVGFLLVLLLFMISYQSYFQER 120
           LLLLL+VHWLSN  N        LPE+DSLH AGGTPWGVGFLLVLLLFMISYQSYFQER
Sbjct: 61  LLLLLVVHWLSNTENGRLPSLIPLPERDSLHRAGGTPWGVGFLLVLLLFMISYQSYFQER 120

Query: 121 WFPLLSR 122
           WFPLLSR
Sbjct: 121 WFPLLSR 127

[Close]

BLAST of CmoCh08G005540 vs. NCBI nr
Match: XP_023548678.1 (uncharacterized protein LOC111807266 [Cucurbita pepo subsp. pepo])

HSP 1 Score: 206.5 bits (524), Expect = 1.3e-49
Identity = 105/127 (82.68%), Postives = 110/127 (86.61%), Query Frame = 0


Query: 1   MAANGGSSAANSHSQPTFPLHLCFFFLILLMFLSFSWYSNYESVVEGVFDQLKLLLIVSP 60
           MA NG SSA+NS SQPTFPLHLCFFFLIL MFL+FSW+S YES VEGVFDQLKLLLIVSP
Sbjct: 1   MAVNGDSSASNSDSQPTFPLHLCFFFLILFMFLAFSWHSTYESAVEGVFDQLKLLLIVSP 60

Query: 61  LLLLLLVHWLSNAGN------FLLPEKDSLHHAGGTPWGVGFLLVLLLFMISYQSYFQER 120
           LLLLLLVHWLSN  N        LPEKDSLH AGGTPWGVGF+LV+LLFMISYQSYFQER
Sbjct: 61  LLLLLLVHWLSNGENGRLPPLVPLPEKDSLHRAGGTPWGVGFMLVILLFMISYQSYFQER 120

Query: 121 WFPLLSR 122
           WFPLLSR
Sbjct: 121 WFPLLSR 127

[Close]

BLAST of CmoCh08G005540 vs. TAIR 10
Match: AT2G31940.1 (unknown protein; INVOLVED IN: biological_process unknown; LOCATED IN: endomembrane system; EXPRESSED IN: 16 plant structures; EXPRESSED DURING: 6 growth stages; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT5G19875.1); Has 227 Blast hits to 227 proteins in 13 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 227; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). )

HSP 1 Score: 130.2 bits (326), Expect = 1.1e-30
Identity = 67/116 (57.76%), Postives = 82/116 (70.69%), Query Frame = 0


Query: 11  NSHSQPTFPLHLCFFFLILLMFLSFSWYSNYESVVEGVFDQLKLLLIVSPLLLLLLVHWL 70
           +    P  PLHLC F LILLMF++ SWY++YE V+EG   Q KL L+ SPLLLLL VH+L
Sbjct: 4   DQEGSPPVPLHLCVFVLILLMFVTISWYASYEPVIEGFTYQFKLALMASPLLLLLAVHFL 63

Query: 71  SN---AGNFL-----LPEKDSLHHAGGTPWGVGFLLVLLLFMISYQSYFQERWFPL 119
           S+    G  +     L E++SL+ AGGTPWGV F+LV L FM+SYQS FQERWFPL
Sbjct: 64  SDDQGVGGMMTSLIHLNERESLYRAGGTPWGVAFMLVFLFFMVSYQSQFQERWFPL 119

[Close]

BLAST of CmoCh08G005540 vs. TAIR 10
Match: AT5G19875.1 (unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: response to oxidative stress; LOCATED IN: endomembrane system; EXPRESSED IN: 21 plant structures; EXPRESSED DURING: 13 growth stages; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT2G31940.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). )

HSP 1 Score: 122.9 bits (307), Expect = 1.8e-28
Identity = 57/99 (57.58%), Postives = 75/99 (75.76%), Query Frame = 0


Query: 21  HLCFFFLILLMFLSFSWYSNYESVVEGVFDQLKLLLIVSPLLLLLLVHWLSNAGNFLL-- 80
           HLCF F+++   LSF+WY N+ES++E   D LKL+ I +PL LLLLVH+ S   +F +  
Sbjct: 21  HLCFLFIVVFFVLSFTWYLNFESIIEDTLDHLKLVFIFTPLFLLLLVHFFSGGLSFYVPW 80

Query: 81  PEKDSLHHAGGTPWGVGFLLVLLLFMISYQSYFQERWFP 118
           PE+DS+H AG +PWGV  +LVL+LFM+SYQS FQERWFP
Sbjct: 81  PEQDSIHRAGSSPWGVAAVLVLILFMVSYQSDFQERWFP 119

[Close]

BLAST of CmoCh08G005540 vs. TAIR 10
Match: AT2G21180.1 (unknown protein; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT5G19875.1); Has 124 Blast hits to 124 proteins in 12 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 124; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). )

HSP 1 Score: 64.3 bits (155), Expect = 7.6e-11
Identity = 42/122 (34.43%), Postives = 58/122 (47.54%), Query Frame = 0


Query: 7   SSAANSHSQPTFPLHLCFFFLILLMFLSFSWYSNYESVVEGVFDQLKLLLIVSPLLLLLL 66
           SS  +S S    P  +     +  +FL  SWY + E   E   +Q+   L++ PL L++L
Sbjct: 8   SSILDSFSLSPLPYPVLLILAVASVFLLSSWYFSLEEAAESAEEQINFALLLIPLFLIVL 67

Query: 67  VHWLSNAGN--FLLPEKDSLHH-----------AGGTPWGVGFLLVLLLFMISYQSYFQE 116
           V WLS+  N   LL    S               G +PWGV  L+VLLL ++ YQS F E
Sbjct: 68  VRWLSSMENPDALLGMFSSSRRTTYVSPGAGGDGGSSPWGVAALIVLLLVLLQYQSSFLE 127

[Close]

BLAST of CmoCh08G005540 vs. TAIR 10
Match: AT5G42146.1 (unknown protein; Has 98 Blast hits to 98 proteins in 12 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 98; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). )

HSP 1 Score: 54.7 bits (130), Expect = 6.1e-08
Identity = 37/109 (33.94%), Postives = 52/109 (47.71%), Query Frame = 0


Query: 19  PLHLCFFFLILLMFLSFSWYSNYESVVEGVFDQLKLLLIVSPLLLLLLVHWLSNAGNFLL 78
           PL L     I+ + L  S Y  Y+  VE     LKL ++  P+L + ++  LS     L 
Sbjct: 29  PLTLLALLAIISLLLFLSSYPRYKYEVEKTAANLKLFMLFLPILFVFVLVSLSFVHRLLF 88

Query: 79  P--------EKDSLHHAGGTPWGVGFLLVLLLFMISYQSYFQERWFPLL 120
                    +  SL   G  PWGV  +L+LLL ++S QSYF   W+P L
Sbjct: 89  KSSYSVRANQAKSLFGEGNFPWGVLLMLILLLLLVSKQSYFHSLWYPNL 137

The following BLAST results are available for this feature:

BLAST of CmoCh08G005540 vs.


Match Name	E-value	Identity	Description

BLAST of CmoCh08G005540 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A6J1H718	1.6e-61	100.00	uncharacterized protein LOC111460692 OS=Cucurbita moschata OX=3662 GN=LOC1114606...	[more]
A0A6J1JW83	1.4e-49	81.10	uncharacterized protein LOC111488435 OS=Cucurbita maxima OX=3661 GN=LOC111488435...	[more]
A0A6J1GPN5	4.2e-49	81.10	uncharacterized protein LOC111456323 OS=Cucurbita moschata OX=3662 GN=LOC1114563...	[more]
A0A0A0K9W6	1.2e-48	86.44	Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_7G429630 PE=4 SV=1	[more]
A0A1S3CE82	1.0e-47	85.71	uncharacterized protein LOC103499879 OS=Cucumis melo OX=3656 GN=LOC103499879 PE=...	[more]

BLAST of CmoCh08G005540 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_022959695.1	3.4e-61	100.00	uncharacterized protein LOC111460692 [Cucurbita moschata]	[more]
KAG6593338.1	8.4e-60	98.35	hypothetical protein SDJN03_12814, partial [Cucurbita argyrosperma subsp. sorori...	[more]
XP_023514532.1	3.2e-59	96.69	uncharacterized protein LOC111778789 [Cucurbita pepo subsp. pepo]	[more]
XP_038898802.1	5.8e-53	87.40	uncharacterized protein LOC120086305 [Benincasa hispida]	[more]
XP_023548678.1	1.3e-49	82.68	uncharacterized protein LOC111807266 [Cucurbita pepo subsp. pepo]	[more]

BLAST of CmoCh08G005540 vs. TAIR 10


Match Name	E-value	Identity	Description
AT2G31940.1	1.1e-30	57.76	unknown protein; INVOLVED IN: biological_process unknown; LOCATED IN: endomembra...	[more]
AT5G19875.1	1.8e-28	57.58	unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: response...	[more]
AT2G21180.1	7.6e-11	34.43	unknown protein; BEST Arabidopsis thaliana protein match is: unknown protein (TA...	[more]
AT5G42146.1	6.1e-08	33.94	unknown protein; Has 98 Blast hits to 98 proteins in 12 species: Archae - 0; Bac...	[more]

InterPro

Analysis Name: InterPro Annotations of Cucurbita moschata (Rifu) v1
Date Performed: 2021-10-25


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	PANTHER	PTHR33306	EXPRESSED PROTEIN-RELATED-RELATED	coord: 13..121
None	No IPR available	PANTHER	PTHR33306:SF5	EXPRESSED PROTEIN-RELATED	coord: 13..121

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
CmoCh08G005540.1	CmoCh08G005540.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
cellular_component	GO:0016021	integral component of membrane