CmoCh08G005170 (gene) Cucurbita moschata (Rifu) v1

Overview


Name	CmoCh08G005170
Type	gene
Organism	Cucurbita moschata (Cucurbita moschata (Rifu) v1)
Description	Nuclear transcription factor Y subunit
Location	Cmo_Chr08: 3225088 .. 3238261 (-)
RNA-Seq Expression	CmoCh08G005170
Synteny	CmoCh08G005170

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: polypeptideexonCDSthree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGGCATCGTTCGGCTCCCTGAAGAACGCCATTTTCGAAAGAGAAGAGAGAAAACAGTGCGTTCTCTTGTTGTTGATCTTTCTTAACATGTCCATAGCTCATTCCCCTGGAGGTTTCTCTGTTAGTTAATTTTATTTCATATTCTTGAAAATGTTGCAGACAGTACCAGGCTCATGTACGAGGGCTCAATGCTTACGATCGCCACAAGAAGTTTATGCATGATTATGGTAAGATTTCGACTGTGTTAATCCTTACCGAACTTTTCGTTGTGCATTTTTGTGTAATTAATGAGCATTTGCGATGGAAGCGATTGGATTGATGATTGTGGCTTAATTATTCGTTGCTTTAGTAGTTTTGACCTGTGGCCTTATTTTTTCAACATGAAGAATTAGTTACTAGCGAATTTCTGCTCAGTTATGGAAGTGATTGAGAGCAATTGTTTTGGTCTGAGCTTATTCGGATTTTGTCTATCTTGATTGCAAATGGATAGAGTGACAACATGGTCATTGGTCCCTTGCTCTAAGAATTTTTAAGTAAAGTTTATCAAGTTAGCCTATAAGCTTATCAGTTGACAGACGGACGTGAAGGAAGCTTGCAAATATTGAGCCCCTTATTTGCATATCCTGGAGTCCCAAAGCAAAAGAATGATGAACAGTTTCCTTCACTAAGATGACAGGAGGCTACAGTCATCCTTACATACATTTTGATGCAAGAGATTTCTCAGCTAACCTTGAGATTAGTTCAAGTACATTAAGCATATTACAGACCTTAATTATGCCTCTCGCCTTTGGCCTTTAGCCATGATCTTCAGTAGGGTAATAAAATTTATTATTTAGAGACTAGAGTAAGTGAAAAAAAGAAAAAGAAAAAGAAAGAAAGATATCAATCCCAGGAAGGACAAATGTTTTGGTGGGGCAGGAGTGTTTGTATATGTCGGGTGAGGTAGTGAAACTTCAATGTGATTATGCAAGTCTTACCTCATTTGAGTCCTCTATTTTTAAAAATTATTTTCTTATAATTATAGATGTGGCTAAGACTAATATTCTTAAAAATGACTGAACTATGGCAGTCTGTTTTCATGCTTGTTAACATATATTTTCTCTAGGAAAGGAGAAGATTTTATATATTTGTGCGAAATGTATAGTATTAAGACTTCAAGTTGGTTTGATATCAAAGTAGGTTTTTTCTATAATTTCATGCATCTTAAAGACAGCTGATCTATTTATAAAAAGGTAGACTTCGAACCGAGACTGTATTTTGTAATTTGAACAATATGTTGGTTAGGCTCATGGATTTTCATTTTCATATTTTCTTTGTACATGGCAACCTTTTATTTTCCCAGGTTGAATATTGTAATGGAGGCACTAGACAGAGAGCACCATATCTTAAAACATTTGAAAATTATGCCAAATTCATGTCAGACAATGGACTAGCAAATAGGCATATCTTCAATTTTTTAATAGCTCCTTTGTCGTTAGTAGATGACTGGATTTTATGTAGTTATTAAGCATTTGAATTGTGTGGTCTTTATTGGTTGCAGTTCATTTCTACGGGAAAAATAAATCTAGGGAAGAAAATTTTCCTATTAAGACCGATCAAGACACCTTGAGGGAGGGCTACCGGTATGTTCCCACTATTCTTTCTATGACAGTCATGGTATAGTTCCTCACTTATGCAACATGTTATGATCAGATTAGAGGAGTTTTCAGTAGGAAATGAACTAGGTTCATACGGGTAGTGGCTTCGAAATAGTTATTTATTATGGATATTGTAAAGTTGATGAAATACTGTGAATAATGGCAACTGTATGTGAACAGTAGATTATTTCTGGAAAGATCTGTTTTGCTTCATCATAGGATGCCCATTACTTTGGTGTATACATTACGGATATTTTACACCATTCATTGATTAAAATTCTTCTTCAGTAAGTTTATAGGCTATTTTGAATTAATTGTTATTAAGGTTCATTCGTTCTGAAGAAGATGACATGGATACATCATGGGAGCAGAAGCTGGTGAAGCGATATTATGATAAGCTTTTTAAAGAGTATCCTATGTATAGCCCAATGTTATATTTTTTTGGGCTTTAGCTGTTTGTTATATAGGTTAAAATAAAAATTTAGATGTGGTTTTCTTTTCGTCTTTGATTTCTATTTGGTGGTTGAACTTTTGAACTTTAAATTTTAGTCGGTGAACTTTTTTCCACTTCTTTTTTCCGCATTTTTTTAGTAACACTTTTTTTCGGTTACTTAATATTCAAAATCTTAATTTTAGTCCTGAAGCTCTTTTTTTTAAAAAAACTTACATTTAATCTCTATGGTAAAGGTGATAACGTGAATATGATGTATATAATAAAGGGGTTACATTGCATTTCTAGAAATTTAAAGAAAGAGGATTTGAAATGAGATTGTAAAAGTTTAACGACCAAAATGAATAGTGGGTTAAAATTGAATAACCAAAATCAGAATGTTAAGAGTTAAGGGACGAAGTTAGATACTAGGTAAAAGTTTTAAGACCAAAACTACATTGAAATCTAAATAAGATACTGTGTACCATACCATTACTTGTATCTGTTAAGGTTCTCTTTTACTAGTAACTTTTGAATAGTTTTCTTTAATGTGCTTTTTAAGGGCTAAATTGCTATTAGGGAAACAGGAATAGTTAAATTTGGTTCCCTATTTAGTTACTTTATTTCCAACAATGTGCAATGCTTTTGATTTCTAGAACAAAATTAATAATATTTTTATGCCTGTGTGAGAGGAAATCAGATTTTGTTGCCTTAAATTTGTTGAAGATACTGCATAGCTGATATGACACAATACAAAAGTGGGAAGGTGAGCATATGGAATTTTCTCACTACTTCAATTTTCAGTTTCTCACTGAAATCGTCACTTGAAATATTTACTATTAAAATTTTTTCCCTATAGATTGGTCTCAGGTGGCGTGTAGAGAAGGAAGTAATGTCTGGCAAAGGTAAAAAAAAAAAAAGAAGAAAAATTATCCATTCTTTAGTAGTGTCTGCTCTCTTTACATTCATCTATTTAAAAAAAAAAAAAAACTTTTAGTATGAATTTCCATTTTCCTACTCGTTGTAAGGTTGGTTTGCCTCTTCATTTAGTATTTACTCTTAGTTTTATTTCTGTTTCTCTGGCTAATTAGTCGGTGGTCAGTAGCCTTAAAAAATTATTCACTTCTTTAAGTACCTTTTTTGTTATTTTGGATATTGGAGCTACCTCCTCTTTTTTAAACGTGCATATAGAATTGTATAAGTTGCATTTTTTTCACAATTTATCCAAAGACATTTAATAGTCGAGAAGTACACAATTTCCTCTTGGCTGTAATCTTTATCTTTTGCCTTGGCTTTGTGGTTGAGCTTTTTCTTGACCACTTTTTCTTCTGTCAGGGCAGTTCATATGCGGTAACAAGCATTGTGATGAGAAAGATGGTTTAGCAAGCTATGAGGTGAAATTAATTTACATCTAGATACTAAAACAAAATATAAAAAATGTTTTATTCAATTTATATCTAGATGCTAGCTTTAGCTAGTTTTCTACTTCAGCATATCAGAAATGATAGAGATTTTTTTTTGGACAGTGATAAACTTGATAATGTACAAATAGGAACATATTATTTGGAATTCTGGGACCAGAGGAGATATATAACAAGGATATAGTAGTTCTTAAATTGGTGCAATGAATTGAAAAGATTAAGCTCAGCATAGCGTAATAGTTTAAACTTTTTTAGTCTGGTTTTGACTTGGCTAGATGTGCTTGATCAACATTCTGTTTGGGCATGTCTGTCCTTTCTTTTTCTGCAAACTTCGAAGTACCAGCTGAACTTACTTCTACATGGTCAGATCAACATTCCGTTGTTCGACTGTAATTGTTTCTTCATGAGGCAAAAGATGGCGTATGGCTAGGGAAAGGACTTCAGAAAAAGAAAGAGACAGGCTTAAAATTTTCTTTTATAAATACAGGAACGATCATGAGATTGTAATGATGGAAATCCATGTGGTTGCAAGCTGTTAGTGCAAATGTTATTGGCATTGATGTATACAGGAAAATGCCAATTTTTTCTATTGCAATTTTATTCTTCATAATGATATCTCTAATGAGCTGGGATGTTCAAGTTTTAAATTGTTTTCTATTTGTTACAGAATTAAAATTTTAAATGATCCATGTTGGCTGCTTCTAGTTGTTACTGCAAATCTTTTTACTTCCCTGTTATTGCAGGTGAACTTTTCTTATTTTGAAGCAGGAGAAAACAAACAAGCCCTTGTAAAGCTGGTAACTTGTGAGAGGTCGGTGGCCCTTTTATACGCTAAGGTTCCCCATTCTTTTTCTTTTTCCCATCGGCGACTATGTTGTTTGTTTCAGCACTTCGATGATGTCATTATGCAATCCATGGAAGCCGTTAAAACTCCATTATACTATCAAATGCTGTTTGTTCCTAAAATGTGATTTGATCTCATTGAATATCACTCTCTTTTTAGCTGATTGAAGGACGCCTTTAGGTCCTATAACATATTGGTATTGTTTCTTTAACATTGTTTTCACAATCAAGGGCCATATGTTTGGACAAGAATTTCATTTATTCTTCTGTGGTGATTGAAGCCGAAAATTTTACAAGTTACTTTAGCATTCATAGAGGTGCAAATGATGGAATGCTGAATTAAATAAGTAATTGGAATCTGAATATATAATATCATTAAATGCAGTTCTATTAAGTCCATTTTGCATGATTTTGAATGTCATATAGCCATCTGCATTTATTTATCCGTTTTATTTCTGCTTGGATATGGTTGAATTAGTTGCTGTTTAGTTTCCATCATCCCATACTTCCATATCTTATATTTTCATCGATTGTGGTAAATATGATGTCAAATGCTAAATATAAAGCAAGCAACTATTTTCACTGTAGTAAATGTTTGTTTGGAATCTGATTTTTTTAAAAAGATGATTTGTCAAATTGGAATCTAACAATTTTCTCACCAAGCTCCCTGTTGACCAAAACCATTGTCTTCGATTCAATTTTTCTATTTTCATATTATCTCATACTTTTATTTCTTTGTAAGATTTATTTACTAATGTTTTCTACCATCTTGGATAATTTGGAATAGATGCTCAAAGAAGCTTCACTACAAGAGAAATAAAGAAAAGGAGAAACTGGAAAGGATGGAGCAAGAAATGTCCAAAAGAAAGAGGTGCTACTCAAAATTGTAAGGTGCAATTTTGTGATTGTCAAGTTTTACAGAAGCTGACTTTATATTTACTTCCAGGCCAAGTGATGACAGTTCAGATAGTGAAGATGCGGGCAGCAGAACAAGGAGGAGAAAAGGTCTGATGAAGTGCCTTTTTACACCATTACGCATGAGAGTTTTTTTTTTTACTATGTCATTAATGGTCATAAAGTGAAAGTTATATTATAGTTGCTACACAGTAACTTTTATGCTTATATTATTTGCTTTTGCGTCTTCGGTTAAGTTAAAGTGGTTGCATTTGAAGAACTTAAAAAATATCGTGCCCCTTAGAGCGTTTGTTAAACTATAGAGGGAGACCATTTACTAGGCTTGGTACCATACTGTCAGATTCATTTGATAGTGTGAAAAGTTGGGTCTGTAATTGAAATCAGAGAACCACTTCGATAATTTGTAGTATAAGGAAATATAGAAAGATACCTCAAGTAGTTAAGAGGACTCTGAAACCTCTCTTACCGACATACTCGAGCGTCCTTAGCTAATGACTTGCACTGTCAATAATTTCATTTCTTTCCTCTCAAAATAGACTAGAAACTATTGGCTAGATTGGGCAGAGGATCTTGTGGCTGAATATCAATAAAGCTCTTATTTAGAATGAACAGAAATGATAGAATTTTTCAGTACGAAGAAAGAAGCCTAGAAGCATTGTTAGACATTTCCATCTTTATAGCTTTATATAGTGTGAAGAATTTCCACCTTTTTACAACTATAGTTTAAACATTCATCCTTTTGTAACATTTCATATTATCGATGAAATTGCTTCCTATCCGAAATAAATGAATAAACCTAAGAATTTTTTGAATACCCTTTTGCCTTCTCTATGCAGGAAAGAAGGCATCAACATCATCAAGGGATCCTAAAGCTGATGATAAAGAGGACTTCGATGAATATCTGGAAGGAATGTTTCCATAATGTTGATGCCATTTTTCAAAATGTGGATGAATACGGACCTCAAGGCTACACTTCCGGTCTCCACGACTATTACTCTCAGTATCCACTTCCTTGAAACCTTTTTGAAGACGACAAATGCCTGTGGCTGTACGTATGCACTTCTTTTCTGGCAATTTATATCTTAACTTGAAACATCATGTGTGTGTGTGTGTGTTCTAATAATGGTTTAATTTTAGTCTTGTCATGGTCTATATAACTTGTTCTGTTAATGAGCTGTGAGGCATGTATTTTTGCCCAAAGCCACTAGTAGAAAGGCTCATACTTTCCCTTGGGAATGAAATGGGCAAAACTGAAAAACCAACCCCACTCGACTCAAACGATAAAATGAACATTTGTTGATCGATTTAGTCTCCCATCTATTCAATGTTCATTCTCTGCCCCCCTTTTGACCATCGTCTCCCTCACTATCACCAACAACCCTTTTCGTTTCGATTGGATTGACCTTTGTTAGCTTCCTCGGATGAACTTCATGACTGATTGAGATTGCTTACTCCTAAGAGGACTTTTGATGAGGATATGTCCAATTGTCTGGTTAGTGAGTGGTGGGTGGATGTTAGAACTTCACATCCAGTTAGCCATTTTTAATTGATAAGGGTATATTTTGTCTGCATTTTCGTTTTTTAATGAAGATTTATAGGATGTTATTTTGAACTTTTTAAATTATTTTTAATATGAATAGTTTAACCATAAATAAATGCTATTTAGGGGTCTGACTTTTGTAATTTTAACTTAAATTTGGTTCTCTGAATTCATATAATAAATATTACTTAAAAAAACAGAGAAATTTAAATTTCAAATAGAATCAGTCAAGTTTAAGATTGATAAAGACAATTTAGAAAACCAAAATATGTCATAGTTTCAGAATGGCTATAAGGGAGTTTTAAAGGGTTCTTGTTAATATGGCTATAGGGGTTTTAAAGGGTTCTTGTTAATAGAAATGTCAAATTTTCATCATTATAAAAATATTTGTTGAAATGTCGTAAAAAGTCACCCTTTTGAAATCAAGTTAAATTTATAAATATATATATATATAACTTAACAAATAAGTACGTATATTTTTTTAAAATAAGTTTAAATTTCTTGAGTTATTTATTTTTGTAAGGAAATATTAATAAGGTCCACATATTGATAGCTCATTTTAGTTTTTATTTTATTTTATTTTTCTATGATATAATATACATGTTGATTAAATCTGATATTTGAAAATATAAGTCAATAAAAATTTAAATGGTTATAATATGTTTAATATATCAAATGGGTGCTTTTTTTTTTCAAAGTTCCAATTTGTCTGTAAATTTTTTTTTTTAATCTTTCAACTTAATTGGTCACATTTTATTCATGAAATGGGTTGGATTGATATTAGTCTGGATATAGCAAAATAATTTTATTAGATCTAATAAGTACGTTGTGTTAGAATTGAAAATTTTCATGGCACAAATCTTTAGTACTCTCTTATTTATTACTTGTGTCTACTATTTACGTAGAATACCGTTACTCATTCTTACTAATAAACTGAAAGAAATAGAGGGGACTAAACAGGAACAAGAGGGATCCACCAAAGAAGATTAGAAAAAAGAAAAGAGGTTAAAAATTGATTTTTTAAAAAATAAAGTGATTTTTTAAAAAATAAAGTTGTGGATTATTTAGGTCTTAAAAATATTGAATAAATTTCAACTGATTTTTTATTTTTTTTTATTTTTAAAATGTTTCATTTCAAATCCACGTTCAGGAGTCCAGCATATGCACAAACGCCACGTTCACCTCATCCACTAAGTTCATGAAACGTGGCGTTATCTCAGGCACTAATCGTTCTTACGTGGCGCTCATGCATTCGGTGGCACGAAATTTGCGTGCTGCATGTCATAATAGCACAAACGACTTGTTACGATCATTTAACGGTTCAGTACGGCACTGTTATCACGGCGTTATAAAATGGAGTTCTAGTGTAATTGTCAGAGGTGAATCTCTGACCTCTCTAATTGTGAAACGTAACGGCCTTCAATTGAATCGTACAGCTGTCAAATTCTCACATTTTCCAATAATTATTATCTGCATTTTAAAAAAATATATTATTATTATTATTATTATTATTTTATTTTTTTTATCTCTTGGGAATGTCCAAAAGCTTGGGGTCCAAACTTCCTTCTTGATTTCCTTTTTTGTATGCATTGAATTATAGTTTTTTAATATGAACGAAATTACAAAATTGCCCTTGTCGTGCATTATCCATTTAATTTTTAGATTTAAAATTCTCCCTCACCAATTCTTTTTTTCTACCTTATTTATTATTATTATTATTATTAAACGTCCAATACACAAATAATGATTGATGTTGAAAGCTCGGGTGGACAACATCAGCTGCTTCGCGTATTATGAAAGTCGTATTGCCCGAAGGAAGGGGGCATGCTGCAAGAGCAGAGGTGAGTGGTAAGCGTAGGAGGCGTGCCCAAAGGGCAGCGGCAGGGACTTCGACTGCTTTGTATCAAGTGAAGATAAGGGAAGGGGTGGTAGGCTTAATAGGGCTCAAATCTACAATATACCCGTTATGAGCGGTACGTTTCAACCAATTAAAAGTCCAATAATTAATTATTTCTCATTTCATCTACTAACAATTCTGTTTATTATCTTTATTTTAAATAAAAAATGTCAAACATGATATATATATATAAAATAAAAATTTAACCAAATTACGAACTTTGAATATCATATCTATTATTATTTAACTAATCTAATTAAAAAATAGAAATAAAAATAAAAATTCAATTGGACCAAGTGTATTATTATACCTAATTATAATATAAAAAATGGGATTAAATAAATCATAATAAAAGGAATTAATAAAAAAAAAATCATTTGAGTGGATGAAGAGGGAAAAAAAAAAGGCCCAATAATTATTTATTTTTAAAAAATTAAAAAATTAATTTTGTGCGCGTGTCTAAAATAAGAAGGTTAAAAGGGTCAACTCACGCCGCCTCTTTATCCCTTTCTTCCTTAAAAGGAGACAATTGGATAACAAGTTGTGTCCTTTGCGTGTATCAATCATTAAATTTTCACCCTATATAATATTAATTCATCTCTATATTATTATAAAATAATTAAAATTAAAATTAATTGTTTATTTATTTACACAATTTTTACTTATTTCGAAGAATTTTCTTTTACGTACTTACAAAATAAACACGAAAAATTTATAATAATTTTTGAAATAGTTATAAATATTAAACCGTTAGATGAAAGTCTCACGTCGGCTAATAATGATTATGAATTTATAATCAAAGAATACTATCTTCATTGGTATGAGGTATTTCGGGGAACCTCAAAGTAAAGTCATGAGAGCTTATACTCAGACAATATTATATTATTGTGGAGAGCCATGAGAACTATTTTTTTCAAAATTTCAAGATAATCAGTCATAATTATATTAAGTTTTTAAAAATAAAACTATAAAATATATCAAAATTACATTTTTAACCTTTTAATTTGGCTCAAAATTACGGGAAAAATATTTGGATAATATAAAGCATAAAAGTTGAAAATGAAAATGAAAAAGAAAAAAAATTAGATAAAAATTATTTTAATATTTAATATATATTATTTAATAATATAAAGCTGCGATATTAGACGGCTGTTAGTTGTTGGAATTTAGGGAGGCAAAGTAATAAATTAAGCGGATAAACTACCATAAATATATAAATTTATTTATTTATTTATGTGTTTTTAAATTAATAGTTTAATAATTTAATAATTTAGTTTTTAATTTTTAATTTTTAATTTTGATCCTCTCCGTTTTAATTTCCTTCTCTCTGTTACCTCCCACTGCCACTGCGCGCAGAGAGGGGAGAGATAGAGGGGGAGAGAGAGAGAGTAATGGAGCTGAGCTAGGAAATCAGAGCGACTTGCGAAGCTAAAGCTTTCCTAGGGTTCGATCGTCTGTTTCACATCACAGTTGTAAGTTATTTTTCCTGCAATTTGCTTTCACTTCTCACTGATTTCGCTCCTTACAATCGGAATTTTGATCGGAGTTTGGTTTCCTTAAGGCTCCATTTCTCTCGAGAAATTTGTGCTTGGTTTTCATCTACAAGCGACGGAATCATGATATTTACGGAAAACACTAGGAATTTTGAGTTTATGAATGAGTAGAACAGAGAAATACTGTTTGTTTGTTAGTTTTTTTTTTTTCCCTAATTTTTCTCTTAACTTTTAGTTTATTTGCTGCATGATTTTCGGCAACCAGAGAAATATATCTATAGAGCCTCTGTTTTGGATCTATGGAAATTGCAGAGGCTGAAGTTTGTATAGTCTGTTTTGGATGTATATCTCTTGATATCTTGAAGCCCTGTAATGTATTGTAGATGAGTTATATGAATCTCTGATGAGTTTCTGTCCACATTGAATGATCATCCGGCATTCAGGAGCTCTTTCAATGATTTTGAGATGCCAGGAATTTCGGGTTGCTTTGCTTAGGGTTATAGAACTAGGCAAGTGTGAAATCACACATCGGTTGGGGAAGAGAACGAAACATTCTTTTTAAGGGCATGTAAACCTCTCCGTAGTAGATGCATTTTTAAAACGTTGAAGGAAGCCCAAAAGAAAAATCCAAAGAAGACAATATTTGCTAGCGGTGGGCTTGGGCCGTTACAGTAAGATCGTGTCCTCCCTATTGTTTAACAATAATTTAAACCCACTTTGGAGAAGGCTCGGACTTTTTTTAGAGCAGCCCCAAACCATGGAATCGGTGTGGTATAAGTAGAAGTGATTTATATTGTTTTTGTTTCTAATGTTCTTCCTTTTGGGGTGGCAGAACAAGTTTCAAACAATGCCCTCAAAACCAGGAATTGTAGAACAAGAAGTTGCTGATGGGGCGAAGTATTTGCTGCAATCAACCAAATACTCTGAGCCTTGGTGGCATGGCGTTGGAAACAATACCATCACTGATGAAGATGCTACCAAAACATCTTCTGCTGAATACCTGAACGTTACTGTTACCAGTGCAGCTATGCTTTCACAAGCAAATGGTATTTAGTTAATTTAATATGCTTCCTATGAACACAATTTAAGCAATATGTTGAAACTTTTCTTGGGTCAGATGAAAATACTGGGAAAGAAGTCCAGCATCTCAAGTACATTCCATTTTCGACATCCCCATCCGTGGGCGAACGCCTAGATCCAAATTCCCAGATGGAACTTGTTGGCCACTCGATTGTAAGAACGAACTGTCTATCTTTCTCTCTGAAATCAATGTATATGAGTAGGTGCCTAAGTTCTTCATTCGTCTGCAATGACTAATCAATATATTTCTTCCCTCGAAGAAATAGATATTTGGGAATTTAGACTTTGTTTTTCTCTTTACTGGATTTCAAAAGAACTTCAAGGATCTCCATTTGCAGGTTTTGACATCATATCCTTTTTCAGATGCACAATGTTGTCAAATGCTGACTTCATATGGACCACAAACAACGGTATGCTCTGATCTCTGGTACAGTTTCTTTTGCTAATTTATATGATCAGTTGCCTTGCACAGAAACGAAAGGCAACATACCAGGGTACTCATCTGTGTTTATTATGTATTGTTGAAATTTATTTGGTATGAACAGACGCTAAATGCGTACTTCTTAGGCCCATCATATATCCTTGTCATGTTTGTTTCTTGCAATTCTTATGATATTTTGTTTAACTCTGAGTTCTCCTGAACAAGAATGCAAATTAGTATAGGGGATCCTTTTGTATAGATCCTACTTGCTGATTGGCTGTTCAAGGATTATGATTATACTTGATTTCCCTGCAGTTACCTCATTTTTATGGACTTCACCATGCTAGGATGCCGTTACCCCTTGAAATGGAAGCAGAGCCTGTTTATGTGAACGCAAAGCAGTATCATGGTATCCTGAGGAGAAGACAGTCGCGTGCCAAAGCTGAGCTTGAGAAGAAAGTGATAAGAAGTAGAAAGGTATTGCAGCTAACTTGTTTCATTCAAGGACTAAGCGGACCAAAAATGAACACTTCAGTTATTGAAAGAAACTTTTGCTAGAAGTTGTCTTTCTGTTCGTATCGATATTACAATTGATCATAGTTGTATCCCATAATTTCGTTTTCTGGATACTCTTTTCCATTTTGTGCAGCCGTATCTTCATGAATCCAGACATCTCCATGCTATGAGACGAGCAAGAGGCAGCGGAGGACGTTTCCTGAATACCAAAAAGCCGAACAGTGTTATTTCCAATAAAACTATGGAGGAAGACATCAATTCTGGTATCAACCATGTATCAGAACCTGTCAGTGAGGGTGGATCAAATTACATGGTGGCTAATGAAAATGGAATGAAGGATACACTTGATGATCAACAAAAGGAGGACAAAGAGTTCATGCCTCAAAATATGCAGATAACACACGCTTTCTTCAATGGTGGAAAGTCGAATGGCCTTGGTTTATCCACATACAATTCAAAACTTGCTGATGAAAGCATGCAGGTGAATGCGGCTCCACAGAGGGCCATCCCCATCAAGTGAAAGTTTCTTGATGGGAATGGGGCTTCCTTCTCCAACGCTGTTTAACCAGTTTCACTGCAAAAAAACTCGAGATTCGGTAAGATCGTTGATTCTTTTAAGGCTGTGTTTCTGGTTGCACAAGTTGGTGGATTTACCCCCCTTCTCTGCTGGGAAGAACACCGCTTTTGGTGGTGTTTCTCAGGCAATTCATTCTTGGCTTTAGTTGAAGGAGGATTAAGAAATGCAGTGCACCAAAAATGTGGTACTTTCGCTCTGCTATTTCCTTTCTCTTTACCTTTTCTATTTCCTATGTAATTCTAATTCTGAATTGTGTCTCTGAAACACAAAGATTTGATGTGTGCAGACTTGTAATTTATTTTAGACGCAGTTATGTGCTGTGTATCTATTCAACTTTGTGTGCTTGTTTTCAGATGATATTCATTTTCAAGTGTGTGCGTACATTAAATTATACATAACAAGGA

mRNA sequence

ATGGCATCGTTCGGCTCCCTGAAGAACGCCATTTTCGAAAGAGAAGAGAGAAAACAGTGCGTTCTCTTGTTGTTGATCTTTCTTAACATGTCCATAGCTCATTCCCCTGGAGGTTTCTCTGAGGCTACAGTCATCCTTACATACATTTTGATGCAAGAGATTTCTCAGCTAACCTTGAGATTAGTTCAAGGTAATAAAATTTATTATTTAGAGACTAGAGTAAGTGAAAAAAAGAAAAAGAAAAAGAAAGAAAGATATCAATCCCAGGAAGGACAAATGTTTTGGTGGGGCAGGAGTGTTTGTATATGTCGGGTGAGGAAAGGAGAAGATTTTATATATTTGTGCGAAATGTATAGTATTAAGACTTCAAGTTGGTTTGATATCAAAGTTGAATATTGTAATGGAGGCACTAGACAGAGAGCACCATATCTTAAAACATTTGAAAATTATGCCAAATTCATGTCAGACAATGGACTAGCAAATAGGCATATCTTCAATTTTTTAATAGCTCCTTTGTCATTAGAGGAGTTTTCAGTAGGAAATGAACTAGGTTCATACGGGTTCATTCGTTCTGAAGAAGATGACATGGATACATCATGGGAGCAGAAGCTGGTGAAGCGATATTATGATAAGCTTTTTAAAGAGTATCCTATATACTGCATAGCTGATATGACACAATACAAAAGTGGGAAGATTGGTCTCAGGTGGCGTGTAGAGAAGGAAGTAATGTCTGGCAAAGGGCAGTTCATATGCGGTAACAAGCATTGTGATGAGAAAGATGGTTTAGCAAGCTATGAGGTGAACTTTTCTTATTTTGAAGCAGGAGAAAACAAACAAGCCCTTGTAAAGCTGGTAACTTGTGAGAGATGCTCAAAGAAGCTTCACTACAAGAGAAATAAAGAAAAGGAGAAACTGGAAAGGATGGAGCAAGAAATGTCCAAAAGAAAGAGGCCAAGTGATGACAGTTCAGATAGTGAAGATGCGGGCAGCAGAACAAGGAGGAGAAAAGGCACTAATCGTTCTTACGTGGCGCTCATGCATTCGGTGGCACGAAATTTGCGTGCTGCATGTCATAATAGCACAAACGACTTGTTACGATCATTTAACGGTTCAGTACGGCACTGTTATCACGGCGTTATAAAATGGAGTTCTAGTGTAATTGTCAGAGCTAAAGCTTTCCTAGGGTTCGATCGTCTGTTTCACATCACAGTTAACAAGTTTCAAACAATGCCCTCAAAACCAGGAATTGTAGAACAAGAAGTTGCTGATGGGGCGAAGTATTTGCTGCAATCAACCAAATACTCTGAGCCTTGGTGGCATGGCGTTGGAAACAATACCATCACTGATGAAGATGCTACCAAAACATCTTCTGCTGAATACCTGAACGTTACTGTTACCAGTGCAGCTATGCTTTCACAAGCAAATGATGAAAATACTGGGAAAGAAGTCCAGCATCTCAAGTACATTCCATTTTCGACATCCCCATCCGTGGGCGAACGCCTAGATCCAAATTCCCAGATGGAACTTGTTGGCCACTCGATTTTACCTCATTTTTATGGACTTCACCATGCTAGGATGCCGTTACCCCTTGAAATGGAAGCAGAGCCTGTTTATGTGAACGCAAAGCAGTATCATGGTATCCTGAGGAGAAGACAGTCGCGTGCCAAAGCTGAGCTTGAGAAGAAAGTGATAAGAAGTAGAAAGCCGTATCTTCATGAATCCAGACATCTCCATGCTATGAGACGAGCAAGAGGCAGCGGAGGACGTTTCCTGAATACCAAAAAGCCGAACAGTGTTATTTCCAATAAAACTATGGAGGAAGACATCAATTCTGGTATCAACCATGTATCAGAACCTGTCAGTGAGGGTGGATCAAATTACATGGTGGCTAATGAAAATGGAATGAAGGATACACTTGATGATCAACAAAAGGAGGACAAAGAGTTCATGCCTCAAAATATGCAGATAACACACGCTTTCTTCAATGGTGGAAAGTCGAATGGCCTTGGTTTATCCACATACAATTCAAAACTTGCTGATGAAAGCATGCAGGTGAATGCGGCTCCACAGAGGGCCATCCCCATCAAGTGAAAGTTTCTTGATGGGAATGGGGCTTCCTTCTCCAACGCTGTTTAACCAGTTTCACTGCAAAAAAACTCGAGATTCGGTAAGATCGTTGATTCTTTTAAGGCTGTGTTTCTGGTTGCACAAGTTGGTGGATTTACCCCCCTTCTCTGCTGGGAAGAACACCGCTTTTGGTGGTGTTTCTCAGGCAATTCATTCTTGGCTTTAGTTGAAGGAGGATTAAGAAATGCAGTGCACCAAAAATGTGGTACTTTCGCTCTGCTATTTCCTTTCTCTTTACCTTTTCTATTTCCTATGTAATTCTAATTCTGAATTGTGTCTCTGAAACACAAAGATTTGATGTGTGCAGACTTGTAATTTATTTTAGACGCAGTTATGTGCTGTGTATCTATTCAACTTTGTGTGCTTGTTTTCAGATGATATTCATTTTCAAGTGTGTGCGTACATTAAATTATACATAACAAGGA

Coding sequence (CDS)

ATGGCATCGTTCGGCTCCCTGAAGAACGCCATTTTCGAAAGAGAAGAGAGAAAACAGTGCGTTCTCTTGTTGTTGATCTTTCTTAACATGTCCATAGCTCATTCCCCTGGAGGTTTCTCTGAGGCTACAGTCATCCTTACATACATTTTGATGCAAGAGATTTCTCAGCTAACCTTGAGATTAGTTCAAGGTAATAAAATTTATTATTTAGAGACTAGAGTAAGTGAAAAAAAGAAAAAGAAAAAGAAAGAAAGATATCAATCCCAGGAAGGACAAATGTTTTGGTGGGGCAGGAGTGTTTGTATATGTCGGGTGAGGAAAGGAGAAGATTTTATATATTTGTGCGAAATGTATAGTATTAAGACTTCAAGTTGGTTTGATATCAAAGTTGAATATTGTAATGGAGGCACTAGACAGAGAGCACCATATCTTAAAACATTTGAAAATTATGCCAAATTCATGTCAGACAATGGACTAGCAAATAGGCATATCTTCAATTTTTTAATAGCTCCTTTGTCATTAGAGGAGTTTTCAGTAGGAAATGAACTAGGTTCATACGGGTTCATTCGTTCTGAAGAAGATGACATGGATACATCATGGGAGCAGAAGCTGGTGAAGCGATATTATGATAAGCTTTTTAAAGAGTATCCTATATACTGCATAGCTGATATGACACAATACAAAAGTGGGAAGATTGGTCTCAGGTGGCGTGTAGAGAAGGAAGTAATGTCTGGCAAAGGGCAGTTCATATGCGGTAACAAGCATTGTGATGAGAAAGATGGTTTAGCAAGCTATGAGGTGAACTTTTCTTATTTTGAAGCAGGAGAAAACAAACAAGCCCTTGTAAAGCTGGTAACTTGTGAGAGATGCTCAAAGAAGCTTCACTACAAGAGAAATAAAGAAAAGGAGAAACTGGAAAGGATGGAGCAAGAAATGTCCAAAAGAAAGAGGCCAAGTGATGACAGTTCAGATAGTGAAGATGCGGGCAGCAGAACAAGGAGGAGAAAAGGCACTAATCGTTCTTACGTGGCGCTCATGCATTCGGTGGCACGAAATTTGCGTGCTGCATGTCATAATAGCACAAACGACTTGTTACGATCATTTAACGGTTCAGTACGGCACTGTTATCACGGCGTTATAAAATGGAGTTCTAGTGTAATTGTCAGAGCTAAAGCTTTCCTAGGGTTCGATCGTCTGTTTCACATCACAGTTAACAAGTTTCAAACAATGCCCTCAAAACCAGGAATTGTAGAACAAGAAGTTGCTGATGGGGCGAAGTATTTGCTGCAATCAACCAAATACTCTGAGCCTTGGTGGCATGGCGTTGGAAACAATACCATCACTGATGAAGATGCTACCAAAACATCTTCTGCTGAATACCTGAACGTTACTGTTACCAGTGCAGCTATGCTTTCACAAGCAAATGATGAAAATACTGGGAAAGAAGTCCAGCATCTCAAGTACATTCCATTTTCGACATCCCCATCCGTGGGCGAACGCCTAGATCCAAATTCCCAGATGGAACTTGTTGGCCACTCGATTTTACCTCATTTTTATGGACTTCACCATGCTAGGATGCCGTTACCCCTTGAAATGGAAGCAGAGCCTGTTTATGTGAACGCAAAGCAGTATCATGGTATCCTGAGGAGAAGACAGTCGCGTGCCAAAGCTGAGCTTGAGAAGAAAGTGATAAGAAGTAGAAAGCCGTATCTTCATGAATCCAGACATCTCCATGCTATGAGACGAGCAAGAGGCAGCGGAGGACGTTTCCTGAATACCAAAAAGCCGAACAGTGTTATTTCCAATAAAACTATGGAGGAAGACATCAATTCTGGTATCAACCATGTATCAGAACCTGTCAGTGAGGGTGGATCAAATTACATGGTGGCTAATGAAAATGGAATGAAGGATACACTTGATGATCAACAAAAGGAGGACAAAGAGTTCATGCCTCAAAATATGCAGATAACACACGCTTTCTTCAATGGTGGAAAGTCGAATGGCCTTGGTTTATCCACATACAATTCAAAACTTGCTGATGAAAGCATGCAGGTGAATGCGGCTCCACAGAGGGCCATCCCCATCAAGTGA

Protein sequence

MASFGSLKNAIFEREERKQCVLLLLIFLNMSIAHSPGGFSEATVILTYILMQEISQLTLRLVQGNKIYYLETRVSEKKKKKKKERYQSQEGQMFWWGRSVCICRVRKGEDFIYLCEMYSIKTSSWFDIKVEYCNGGTRQRAPYLKTFENYAKFMSDNGLANRHIFNFLIAPLSLEEFSVGNELGSYGFIRSEEDDMDTSWEQKLVKRYYDKLFKEYPIYCIADMTQYKSGKIGLRWRVEKEVMSGKGQFICGNKHCDEKDGLASYEVNFSYFEAGENKQALVKLVTCERCSKKLHYKRNKEKEKLERMEQEMSKRKRPSDDSSDSEDAGSRTRRRKGTNRSYVALMHSVARNLRAACHNSTNDLLRSFNGSVRHCYHGVIKWSSSVIVRAKAFLGFDRLFHITVNKFQTMPSKPGIVEQEVADGAKYLLQSTKYSEPWWHGVGNNTITDEDATKTSSAEYLNVTVTSAAMLSQANDENTGKEVQHLKYIPFSTSPSVGERLDPNSQMELVGHSILPHFYGLHHARMPLPLEMEAEPVYVNAKQYHGILRRRQSRAKAELEKKVIRSRKPYLHESRHLHAMRRARGSGGRFLNTKKPNSVISNKTMEEDINSGINHVSEPVSEGGSNYMVANENGMKDTLDDQQKEDKEFMPQNMQITHAFFNGGKSNGLGLSTYNSKLADESMQVNAAPQRAIPIK

Homology

[Close]

BLAST of CmoCh08G005170 vs. ExPASy Swiss-Prot
Match: Q70Z53 (Protein FRA10AC1 OS=Homo sapiens OX=9606 GN=FRA10AC1 PE=1 SV=3)

HSP 1 Score: 151.8 bits (382), Expect = 2.9e-35
Identity = 79/161 (49.07%), Postives = 113/161 (70.19%), Query Frame = 0


Query: 185 SYGFIRSEEDDMDTSWEQKLVKRYYDKLFKEYPIYCIADMTQYKSGKIGLRWRVEKEVMS 244
           ++ F+ +EED+MD +WE++L K+YYDKLFKE   YCIAD+++YK  K G RWRVEKEV+S
Sbjct: 112 NHRFLWNEEDEMDMTWEKRLAKKYYDKLFKE---YCIADLSKYKENKFGFRWRVEKEVIS 171

Query: 245 GKGQFICGNKHCDEKDGLASYEVNFSYFEAGENKQALVKLVTCERCSKKLHY-------K 304
           GKGQF CGNK+CD+K+GL S+EVNF Y E GE + ALVKL  C+ CS KL++       K
Sbjct: 172 GKGQFFCGNKYCDKKEGLKSWEVNFGYIEHGEKRNALVKLRLCQECSIKLNFHHRRKEIK 231

Query: 305 RNKEKEKLERMEQEMSKRK---RPSDDSSDSEDAGSRTRRR 336
             K K+K ++  +E S +K     ++++S  +D G  + ++
Sbjct: 232 SKKRKDKTKKDCEESSHKKSRLSSAEEASKKKDKGHSSSKK 269

[Close]

BLAST of CmoCh08G005170 vs. ExPASy Swiss-Prot
Match: Q5FVF1 (Protein FRA10AC1 homolog OS=Rattus norvegicus OX=10116 GN=Fra10ac1 PE=1 SV=1)

HSP 1 Score: 148.3 bits (373), Expect = 3.3e-34
Identity = 79/167 (47.31%), Postives = 112/167 (67.07%), Query Frame = 0


Query: 185 SYGFIRSEEDDMDTSWEQKLVKRYYDKLFKEYPIYCIADMTQYKSGKIGLRWRVEKEVMS 244
           ++ F+ +EED+ D +WE++L K+YYDKLFKE   YCIAD+++YK  K G RWR+EKEV+S
Sbjct: 112 NHRFLWNEEDEADMTWEKRLAKKYYDKLFKE---YCIADLSRYKENKFGFRWRIEKEVIS 171

Query: 245 GKGQFICGNKHCDEKDGLASYEVNFSYFEAGENKQALVKLVTCERCSKKL--HYKRNKEK 304
           GKGQF CGNK CDEK+GL S+EVNF Y E GE + ALVKL  C+ CS KL  H++R + K
Sbjct: 172 GKGQFFCGNKCCDEKEGLKSWEVNFGYTEHGEKRNALVKLRLCQECSFKLNFHHRRKEIK 231

Query: 305 EKLERMEQEMSKRKRP--------SDDSSDSEDAGSRTRRRKGTNRS 342
              +R + +    + P        S+++S  +D G  + +R   +R+
Sbjct: 232 STKKRSKTKTESDESPHKNSRSSSSEEASQGKDEGHSSSKRSEDSRN 275

[Close]

BLAST of CmoCh08G005170 vs. ExPASy Swiss-Prot
Match: Q8BP78 (Protein FRA10AC1 homolog OS=Mus musculus OX=10090 GN=Fra10ac1 PE=1 SV=3)

HSP 1 Score: 146.7 bits (369), Expect = 9.5e-34
Identity = 79/167 (47.31%), Postives = 112/167 (67.07%), Query Frame = 0


Query: 185 SYGFIRSEEDDMDTSWEQKLVKRYYDKLFKEYPIYCIADMTQYKSGKIGLRWRVEKEVMS 244
           ++ F+ +EED+ D +WE++L K+YYDKLFKE   YCIAD+++YK  K G RWR+EKEV+S
Sbjct: 112 NHRFLWNEEDEADMTWEKRLAKKYYDKLFKE---YCIADLSRYKENKFGFRWRIEKEVIS 171

Query: 245 GKGQFICGNKHCDEKDGLASYEVNFSYFEAGENKQALVKLVTCERCSKKLHY-------K 304
           GKGQF CGNK C+EK+GL S+EVNF Y E GE + ALVKL  C+ CS KL++       K
Sbjct: 172 GKGQFFCGNKCCNEKEGLRSWEVNFGYTEHGEKRNALVKLRLCQECSFKLNFHHRRKEIK 231

Query: 305 RNKEKEKLERMEQEMSKRKR---PSDDSSDSEDAGSRTRRRKGTNRS 342
             K+K K      E  ++K    PS+++S  +D G  + ++   +R+
Sbjct: 232 STKKKSKTTPECDESPRKKSRSPPSEEASKGKDEGHSSSKKSEDSRN 275

[Close]

BLAST of CmoCh08G005170 vs. ExPASy Swiss-Prot
Match: Q945M9 (Nuclear transcription factor Y subunit A-9 OS=Arabidopsis thaliana OX=3702 GN=NFYA9 PE=1 SV=1)

HSP 1 Score: 121.3 bits (303), Expect = 4.3e-26
Identity = 67/107 (62.62%), Postives = 79/107 (73.83%), Query Frame = 0


Query: 520 GLHHARMPLPLEMEAEPVYVNAKQYHGILRRRQSRAKAELEKKVIRSRKPYLHESRHLHA 579
           G+ H+RMPLP EM  EPV+VNAKQY  ILRRRQ+RAKAELEKK+I+SRKPYLHESRH HA
Sbjct: 151 GMPHSRMPLPPEMAQEPVFVNAKQYQAILRRRQARAKAELEKKLIKSRKPYLHESRHQHA 210

Query: 580 MRRARGSGGRFLNTKKPNSVISNKTMEEDINSGINHVSEPVSEGGSN 627
           MRR RG+GGRF   KK N+  S +  EE  N    HV++  S   S+
Sbjct: 211 MRRPRGTGGRF--AKKTNTEASKRKAEEKSN---GHVTQSPSSSNSD 252

[Close]

BLAST of CmoCh08G005170 vs. ExPASy Swiss-Prot
Match: Q9LXV5 (Nuclear transcription factor Y subunit A-1 OS=Arabidopsis thaliana OX=3702 GN=NFYA1 PE=2 SV=1)

HSP 1 Score: 117.1 bits (292), Expect = 8.0e-25
Identity = 86/227 (37.89%), Postives = 107/227 (47.14%), Query Frame = 0


Query: 410 MPSKPGIVEQEVADGAKYLLQSTKYSEPWW--------------------------HGVG 469
           M SKPG   +E  +    + Q   Y+EPWW                          +G  
Sbjct: 1   MQSKPGRENEEEVNNHHAVQQPMMYAEPWWKNNSFGVVPQARPSGIPSNSSSLDCPNGSE 60

Query: 470 NNTITDEDATKTSSAEYLNVTVTSAAMLSQANDENTGKE-------VQHLKYIPFSTSPS 529
           +N +         + E       S A  S  + +N G E       ++++   P    P 
Sbjct: 61  SNDVHSASEDGALNGENDGTWKDSQAATSSRSVDNHGMEGNDPALSIRNMHDQPLVQPPE 120

Query: 530 -VGERL--------DP--NSQMELVGHSILPH--FYGLHHARMPLPLEMEAEPVYVNAKQ 589
            VG  +        DP     M   GH  L    + G+   R  LPL+M  EPVYVNAKQ
Sbjct: 121 LVGHYIACVPNPYQDPYYGGLMGAYGHQQLGFRPYLGMPRERTALPLDMAQEPVYVNAKQ 180

Query: 590 YHGILRRRQSRAKAELEKKVIRSRKPYLHESRHLHAMRRARGSGGRF 591
           Y GILRRR++RAKAELE+KVIR RKPYLHESRH HAMRRAR SGGRF
Sbjct: 181 YEGILRRRKARAKAELERKVIRDRKPYLHESRHKHAMRRARASGGRF 227

[Close]

BLAST of CmoCh08G005170 vs. ExPASy TrEMBL
Match: A0A6J1HB71 (Nuclear transcription factor Y subunit OS=Cucurbita moschata OX=3662 GN=LOC111461216 PE=3 SV=1)

HSP 1 Score: 569.7 bits (1467), Expect = 1.7e-158
Identity = 292/316 (92.41%), Postives = 292/316 (92.41%), Query Frame = 0


Query: 405 NKFQTMPSKPGIVEQEVADGAKYLLQSTKYSEPWWHGVGNNTITDEDATKTSSAEYLNVT 464
           NKFQTMPSKPGIVEQEVADGAKYLLQSTKYSEPWWHGVGNNTITDEDATKTSSAEYLNVT
Sbjct: 9   NKFQTMPSKPGIVEQEVADGAKYLLQSTKYSEPWWHGVGNNTITDEDATKTSSAEYLNVT 68

Query: 465 VTSAAMLSQANDENTGKEVQHLKYIPFSTSPSVGERLDPNSQMELVGHSI---------- 524
           VTSAAMLSQANDENTGKEVQHLKYIPFSTSPSVGERLDPNSQMELVGHSI          
Sbjct: 69  VTSAAMLSQANDENTGKEVQHLKYIPFSTSPSVGERLDPNSQMELVGHSIVLTSYPFSDA 128

Query: 525 --------------LPHFYGLHHARMPLPLEMEAEPVYVNAKQYHGILRRRQSRAKAELE 584
                         LPHFYGLHHARMPLPLEMEAEPVYVNAKQYHGILRRRQSRAKAELE
Sbjct: 129 QCCQMLTSYGPQTTLPHFYGLHHARMPLPLEMEAEPVYVNAKQYHGILRRRQSRAKAELE 188

Query: 585 KKVIRSRKPYLHESRHLHAMRRARGSGGRFLNTKKPNSVISNKTMEEDINSGINHVSEPV 644
           KKVIRSRKPYLHESRHLHAMRRARGSGGRFLNTKKPNSVISNKTMEEDINSGINHVSEPV
Sbjct: 189 KKVIRSRKPYLHESRHLHAMRRARGSGGRFLNTKKPNSVISNKTMEEDINSGINHVSEPV 248

Query: 645 SEGGSNYMVANENGMKDTLDDQQKEDKEFMPQNMQITHAFFNGGKSNGLGLSTYNSKLAD 697
           SEGGSNYMVANENGMKDTLDDQQKEDKEFMPQNMQITHAFFNGGKSNGLGLSTYNSKLAD
Sbjct: 249 SEGGSNYMVANENGMKDTLDDQQKEDKEFMPQNMQITHAFFNGGKSNGLGLSTYNSKLAD 308

[Close]

BLAST of CmoCh08G005170 vs. ExPASy TrEMBL
Match: A0A6J1H7S4 (Nuclear transcription factor Y subunit OS=Cucurbita moschata OX=3662 GN=LOC111461216 PE=3 SV=1)

HSP 1 Score: 558.9 bits (1439), Expect = 3.0e-155
Identity = 287/311 (92.28%), Postives = 287/311 (92.28%), Query Frame = 0


Query: 410 MPSKPGIVEQEVADGAKYLLQSTKYSEPWWHGVGNNTITDEDATKTSSAEYLNVTVTSAA 469
           MPSKPGIVEQEVADGAKYLLQSTKYSEPWWHGVGNNTITDEDATKTSSAEYLNVTVTSAA
Sbjct: 1   MPSKPGIVEQEVADGAKYLLQSTKYSEPWWHGVGNNTITDEDATKTSSAEYLNVTVTSAA 60

Query: 470 MLSQANDENTGKEVQHLKYIPFSTSPSVGERLDPNSQMELVGHSI--------------- 529
           MLSQANDENTGKEVQHLKYIPFSTSPSVGERLDPNSQMELVGHSI               
Sbjct: 61  MLSQANDENTGKEVQHLKYIPFSTSPSVGERLDPNSQMELVGHSIVLTSYPFSDAQCCQM 120

Query: 530 ---------LPHFYGLHHARMPLPLEMEAEPVYVNAKQYHGILRRRQSRAKAELEKKVIR 589
                    LPHFYGLHHARMPLPLEMEAEPVYVNAKQYHGILRRRQSRAKAELEKKVIR
Sbjct: 121 LTSYGPQTTLPHFYGLHHARMPLPLEMEAEPVYVNAKQYHGILRRRQSRAKAELEKKVIR 180

Query: 590 SRKPYLHESRHLHAMRRARGSGGRFLNTKKPNSVISNKTMEEDINSGINHVSEPVSEGGS 649
           SRKPYLHESRHLHAMRRARGSGGRFLNTKKPNSVISNKTMEEDINSGINHVSEPVSEGGS
Sbjct: 181 SRKPYLHESRHLHAMRRARGSGGRFLNTKKPNSVISNKTMEEDINSGINHVSEPVSEGGS 240

Query: 650 NYMVANENGMKDTLDDQQKEDKEFMPQNMQITHAFFNGGKSNGLGLSTYNSKLADESMQV 697
           NYMVANENGMKDTLDDQQKEDKEFMPQNMQITHAFFNGGKSNGLGLSTYNSKLADESMQV
Sbjct: 241 NYMVANENGMKDTLDDQQKEDKEFMPQNMQITHAFFNGGKSNGLGLSTYNSKLADESMQV 300

[Close]

BLAST of CmoCh08G005170 vs. ExPASy TrEMBL
Match: A0A6J1L019 (Nuclear transcription factor Y subunit OS=Cucurbita maxima OX=3661 GN=LOC111497856 PE=3 SV=1)

HSP 1 Score: 505.0 bits (1299), Expect = 5.1e-139
Identity = 257/288 (89.24%), Postives = 260/288 (90.28%), Query Frame = 0


Query: 405 NKFQTMPSKPGIVEQEVADGAKYLLQSTKYSEPWWHGVGNNTITDEDATKTSSAEYLNVT 464
           NKFQTMPSKPGIVEQEV DGAKYLLQSTKYSEPWWHGVGNNTITDEDATKTSSAEYL+VT
Sbjct: 9   NKFQTMPSKPGIVEQEVVDGAKYLLQSTKYSEPWWHGVGNNTITDEDATKTSSAEYLDVT 68

Query: 465 VTSAAMLSQANDENTGKEVQHLKYIPFSTSPSVGERLDPNSQMELVGHSI---------- 524
           VTSAAMLSQANDENTGKEVQHLKYIPFSTSP VGERLDPNSQMEL+GHSI          
Sbjct: 69  VTSAAMLSQANDENTGKEVQHLKYIPFSTSPPVGERLDPNSQMELIGHSIVLTSYPFSDA 128

Query: 525 --------------LPHFYGLHHARMPLPLEMEAEPVYVNAKQYHGILRRRQSRAKAELE 584
                         LPHFYGLHHARMPLPLEMEAEPVYVNAKQYHGILRRRQSRAKAELE
Sbjct: 129 QCCQMLTSYGPQTTLPHFYGLHHARMPLPLEMEAEPVYVNAKQYHGILRRRQSRAKAELE 188

Query: 585 KKVIRSRKPYLHESRHLHAMRRARGSGGRFLNTKKPNSVISNKTMEEDINSGINHVSEPV 644
           KKVI+SRKPYLHESRHLHAMRRARGSGGRFLNTKKPNSVISNKTMEEDINSGINHVSEPV
Sbjct: 189 KKVIKSRKPYLHESRHLHAMRRARGSGGRFLNTKKPNSVISNKTMEEDINSGINHVSEPV 248

Query: 645 SEGGSNYMVANENGMKDTLDDQQKEDKEFMPQNMQITHAFFNGGKSNG 669
           SE GSNYMVANENGMKDTLD QQKEDKEFMPQNMQITHAFFNGGKSNG
Sbjct: 249 SESGSNYMVANENGMKDTLDGQQKEDKEFMPQNMQITHAFFNGGKSNG 296

[Close]

BLAST of CmoCh08G005170 vs. ExPASy TrEMBL
Match: A0A6J1KWS3 (Nuclear transcription factor Y subunit OS=Cucurbita maxima OX=3661 GN=LOC111497856 PE=3 SV=1)

HSP 1 Score: 494.2 bits (1271), Expect = 8.9e-136
Identity = 252/283 (89.05%), Postives = 255/283 (90.11%), Query Frame = 0


Query: 410 MPSKPGIVEQEVADGAKYLLQSTKYSEPWWHGVGNNTITDEDATKTSSAEYLNVTVTSAA 469
           MPSKPGIVEQEV DGAKYLLQSTKYSEPWWHGVGNNTITDEDATKTSSAEYL+VTVTSAA
Sbjct: 1   MPSKPGIVEQEVVDGAKYLLQSTKYSEPWWHGVGNNTITDEDATKTSSAEYLDVTVTSAA 60

Query: 470 MLSQANDENTGKEVQHLKYIPFSTSPSVGERLDPNSQMELVGHSI--------------- 529
           MLSQANDENTGKEVQHLKYIPFSTSP VGERLDPNSQMEL+GHSI               
Sbjct: 61  MLSQANDENTGKEVQHLKYIPFSTSPPVGERLDPNSQMELIGHSIVLTSYPFSDAQCCQM 120

Query: 530 ---------LPHFYGLHHARMPLPLEMEAEPVYVNAKQYHGILRRRQSRAKAELEKKVIR 589
                    LPHFYGLHHARMPLPLEMEAEPVYVNAKQYHGILRRRQSRAKAELEKKVI+
Sbjct: 121 LTSYGPQTTLPHFYGLHHARMPLPLEMEAEPVYVNAKQYHGILRRRQSRAKAELEKKVIK 180

Query: 590 SRKPYLHESRHLHAMRRARGSGGRFLNTKKPNSVISNKTMEEDINSGINHVSEPVSEGGS 649
           SRKPYLHESRHLHAMRRARGSGGRFLNTKKPNSVISNKTMEEDINSGINHVSEPVSE GS
Sbjct: 181 SRKPYLHESRHLHAMRRARGSGGRFLNTKKPNSVISNKTMEEDINSGINHVSEPVSESGS 240

Query: 650 NYMVANENGMKDTLDDQQKEDKEFMPQNMQITHAFFNGGKSNG 669
           NYMVANENGMKDTLD QQKEDKEFMPQNMQITHAFFNGGKSNG
Sbjct: 241 NYMVANENGMKDTLDGQQKEDKEFMPQNMQITHAFFNGGKSNG 283

[Close]

BLAST of CmoCh08G005170 vs. ExPASy TrEMBL
Match: A0A6J1JU93 (Nuclear transcription factor Y subunit OS=Cucurbita maxima OX=3661 GN=LOC111488410 PE=3 SV=1)

HSP 1 Score: 438.3 bits (1126), Expect = 5.8e-119
Identity = 227/296 (76.69%), Postives = 248/296 (83.78%), Query Frame = 0


Query: 410 MPSKPGIVEQEVADGAKYLLQSTKYSEPWWHGVGNNTITDEDATKTSSAEYLNVTVTSAA 469
           MPSKP  V+Q+  DG+KYL+QSTKYSE WWHGVGNNTI  E+ATKT+S +YLN TV+S  
Sbjct: 1   MPSKPENVDQQTVDGSKYLVQSTKYSEAWWHGVGNNTIAGENATKTASTDYLNDTVSSGG 60

Query: 470 MLSQANDENTGKEVQHLKYIPFSTSPSVGERLDPNSQMELVGHSILPHFYGLHHARMPLP 529
             SQANDEN GKEVQHLKYIPFSTSP VGERLD NSQMELVGHSI PH YGLHHARMPLP
Sbjct: 61  TQSQANDENIGKEVQHLKYIPFSTSPPVGERLDLNSQMELVGHSIFPHIYGLHHARMPLP 120

Query: 530 LEMEAEPVYVNAKQYHGILRRRQSRAKAELEKKVIRSRKPYLHESRHLHAMRRARGSGGR 589
           LEME EPVYVNAKQYHGILRRRQSRAKAELEKKVI+SRKPYLHESRHLHAMRRARGSGGR
Sbjct: 121 LEMEEEPVYVNAKQYHGILRRRQSRAKAELEKKVIKSRKPYLHESRHLHAMRRARGSGGR 180

Query: 590 FLNTKKPNSVISNKTMEEDINSGINHVSEPVSEGGSNYMVANENGMKDTLDDQQKEDKEF 649
           FLNTKKPN+VISN   E+ IN G NH ++PV+E GS YMVA+ENG+KDTL++   EDKEF
Sbjct: 181 FLNTKKPNNVISNTDREKGINFGANHPTKPVNEAGSKYMVADENGIKDTLNE---EDKEF 240

Query: 650 MPQNMQITHAFFNGGKSNGLGLSTYNSKLAD----------ESMQVNAAPQRAIPI 696
           M QN+QIT AFFN GK NG G+STY S+LAD          ESMQVN APQRAIPI
Sbjct: 241 MTQNLQITRAFFN-GKLNGHGISTYTSQLADVEGDHLDQPHESMQVNGAPQRAIPI 292

[Close]

BLAST of CmoCh08G005170 vs. NCBI nr
Match: KAG6593299.1 (Nuclear transcription factor Y subunit A-9, partial [Cucurbita argyrosperma subsp. sororia])

HSP 1 Score: 672.5 bits (1734), Expect = 3.8e-189
Identity = 355/433 (81.99%), Postives = 356/433 (82.22%), Query Frame = 0


Query: 337 GTNRSYVALMHSVARNLRAACHNSTNDLLRSFNGSVRHCYHGVIKWSSSVIVR------- 396
           GT RSYVALMHSVARNLRAACHNSTNDLLRSFNGSVRHCYHGVIKWSSSVIVR       
Sbjct: 8   GTRRSYVALMHSVARNLRAACHNSTNDLLRSFNGSVRHCYHGVIKWSSSVIVRGGSLTSL 67

Query: 397 ------------------------------------------AKAFLGFDRLFHITVNKF 456
                                                     AKA LGFDRLFHITVNKF
Sbjct: 68  IVKRPSCIMKVVLPEGRGYAARAEGGRDFNCLVSGEDKKGRSAKASLGFDRLFHITVNKF 127

Query: 457 QTMPSKPGIVEQEVADGAKYLLQSTKYSEPWWHGVGNNTITDEDATKTSSAEYLNVTVTS 516
           QTMPSKPGIVEQEVADGAKYLLQSTKYSEPWWHGVGNNTITDEDATKTSSAEYLNVTVTS
Sbjct: 128 QTMPSKPGIVEQEVADGAKYLLQSTKYSEPWWHGVGNNTITDEDATKTSSAEYLNVTVTS 187

Query: 517 AAMLSQANDENTGKEVQHLKYIPFSTSPSVGERLDPNSQMELVGHSI------------- 576
           AAMLSQANDENTGKEVQHLKYIPFSTSP VGERLDPNSQMELVGHSI             
Sbjct: 188 AAMLSQANDENTGKEVQHLKYIPFSTSPPVGERLDPNSQMELVGHSIVLTSYPFSDAQCC 247

Query: 577 -----------LPHFYGLHHARMPLPLEMEAEPVYVNAKQYHGILRRRQSRAKAELEKKV 636
                      LPHFYGLHHARMPLPLEMEAEPVYVNAKQYHGILRRRQSRAKAELEKKV
Sbjct: 248 QMLTSYGPQTTLPHFYGLHHARMPLPLEMEAEPVYVNAKQYHGILRRRQSRAKAELEKKV 307

Query: 637 IRSRKPYLHESRHLHAMRRARGSGGRFLNTKKPNSVISNKTMEEDINSGINHVSEPVSEG 696
           I+SRKPYLHESRHLHAMRRARGSGGRFLNTKKPNSVISNKTMEEDINSGINHVSEPVSEG
Sbjct: 308 IKSRKPYLHESRHLHAMRRARGSGGRFLNTKKPNSVISNKTMEEDINSGINHVSEPVSEG 367

[Close]

BLAST of CmoCh08G005170 vs. NCBI nr
Match: XP_022960498.1 (nuclear transcription factor Y subunit A-1-like isoform X1 [Cucurbita moschata] >XP_022960499.1 nuclear transcription factor Y subunit A-1-like isoform X1 [Cucurbita moschata])

HSP 1 Score: 569.7 bits (1467), Expect = 3.5e-158
Identity = 292/316 (92.41%), Postives = 292/316 (92.41%), Query Frame = 0


Query: 405 NKFQTMPSKPGIVEQEVADGAKYLLQSTKYSEPWWHGVGNNTITDEDATKTSSAEYLNVT 464
           NKFQTMPSKPGIVEQEVADGAKYLLQSTKYSEPWWHGVGNNTITDEDATKTSSAEYLNVT
Sbjct: 9   NKFQTMPSKPGIVEQEVADGAKYLLQSTKYSEPWWHGVGNNTITDEDATKTSSAEYLNVT 68

Query: 465 VTSAAMLSQANDENTGKEVQHLKYIPFSTSPSVGERLDPNSQMELVGHSI---------- 524
           VTSAAMLSQANDENTGKEVQHLKYIPFSTSPSVGERLDPNSQMELVGHSI          
Sbjct: 69  VTSAAMLSQANDENTGKEVQHLKYIPFSTSPSVGERLDPNSQMELVGHSIVLTSYPFSDA 128

Query: 525 --------------LPHFYGLHHARMPLPLEMEAEPVYVNAKQYHGILRRRQSRAKAELE 584
                         LPHFYGLHHARMPLPLEMEAEPVYVNAKQYHGILRRRQSRAKAELE
Sbjct: 129 QCCQMLTSYGPQTTLPHFYGLHHARMPLPLEMEAEPVYVNAKQYHGILRRRQSRAKAELE 188

Query: 585 KKVIRSRKPYLHESRHLHAMRRARGSGGRFLNTKKPNSVISNKTMEEDINSGINHVSEPV 644
           KKVIRSRKPYLHESRHLHAMRRARGSGGRFLNTKKPNSVISNKTMEEDINSGINHVSEPV
Sbjct: 189 KKVIRSRKPYLHESRHLHAMRRARGSGGRFLNTKKPNSVISNKTMEEDINSGINHVSEPV 248

Query: 645 SEGGSNYMVANENGMKDTLDDQQKEDKEFMPQNMQITHAFFNGGKSNGLGLSTYNSKLAD 697
           SEGGSNYMVANENGMKDTLDDQQKEDKEFMPQNMQITHAFFNGGKSNGLGLSTYNSKLAD
Sbjct: 249 SEGGSNYMVANENGMKDTLDDQQKEDKEFMPQNMQITHAFFNGGKSNGLGLSTYNSKLAD 308

[Close]

BLAST of CmoCh08G005170 vs. NCBI nr
Match: KAG7025650.1 (Nuclear transcription factor Y subunit A-9 [Cucurbita argyrosperma subsp. argyrosperma])

HSP 1 Score: 563.9 bits (1452), Expect = 1.9e-156
Identity = 289/316 (91.46%), Postives = 290/316 (91.77%), Query Frame = 0


Query: 405 NKFQTMPSKPGIVEQEVADGAKYLLQSTKYSEPWWHGVGNNTITDEDATKTSSAEYLNVT 464
           NKFQTMPSKPGIVEQEVADGAKYLLQSTKYSEPWWHGVGNNTITDEDATKTSSAEYLNVT
Sbjct: 9   NKFQTMPSKPGIVEQEVADGAKYLLQSTKYSEPWWHGVGNNTITDEDATKTSSAEYLNVT 68

Query: 465 VTSAAMLSQANDENTGKEVQHLKYIPFSTSPSVGERLDPNSQMELVGHSI---------- 524
           VTSAAMLSQANDENTGKEVQHLKYIPFSTSP VGERLDPNSQMELVGHSI          
Sbjct: 69  VTSAAMLSQANDENTGKEVQHLKYIPFSTSPPVGERLDPNSQMELVGHSIVLTSYPFSDA 128

Query: 525 --------------LPHFYGLHHARMPLPLEMEAEPVYVNAKQYHGILRRRQSRAKAELE 584
                         LPHFYGLHHARMPLPLEMEAEPVYVNAKQYHGILRRRQSRAKAELE
Sbjct: 129 QCCQMLTSYGPQTTLPHFYGLHHARMPLPLEMEAEPVYVNAKQYHGILRRRQSRAKAELE 188

Query: 585 KKVIRSRKPYLHESRHLHAMRRARGSGGRFLNTKKPNSVISNKTMEEDINSGINHVSEPV 644
           KKVI+SRKPYLHESRHLHAMRRARGSGGRFLNTKKPNSVISNKTMEEDINSGINHVSEPV
Sbjct: 189 KKVIKSRKPYLHESRHLHAMRRARGSGGRFLNTKKPNSVISNKTMEEDINSGINHVSEPV 248

Query: 645 SEGGSNYMVANENGMKDTLDDQQKEDKEFMPQNMQITHAFFNGGKSNGLGLSTYNSKLAD 697
           SEGGSNYMVANENGMKDTLDDQQKEDKEFMPQNMQITHAFFNGGKSNG GLSTYNSKLAD
Sbjct: 249 SEGGSNYMVANENGMKDTLDDQQKEDKEFMPQNMQITHAFFNGGKSNGHGLSTYNSKLAD 308

[Close]

BLAST of CmoCh08G005170 vs. NCBI nr
Match: XP_022960500.1 (nuclear transcription factor Y subunit A-1-like isoform X2 [Cucurbita moschata] >XP_022960501.1 nuclear transcription factor Y subunit A-1-like isoform X2 [Cucurbita moschata])

HSP 1 Score: 558.9 bits (1439), Expect = 6.1e-155
Identity = 287/311 (92.28%), Postives = 287/311 (92.28%), Query Frame = 0


Query: 410 MPSKPGIVEQEVADGAKYLLQSTKYSEPWWHGVGNNTITDEDATKTSSAEYLNVTVTSAA 469
           MPSKPGIVEQEVADGAKYLLQSTKYSEPWWHGVGNNTITDEDATKTSSAEYLNVTVTSAA
Sbjct: 1   MPSKPGIVEQEVADGAKYLLQSTKYSEPWWHGVGNNTITDEDATKTSSAEYLNVTVTSAA 60

Query: 470 MLSQANDENTGKEVQHLKYIPFSTSPSVGERLDPNSQMELVGHSI--------------- 529
           MLSQANDENTGKEVQHLKYIPFSTSPSVGERLDPNSQMELVGHSI               
Sbjct: 61  MLSQANDENTGKEVQHLKYIPFSTSPSVGERLDPNSQMELVGHSIVLTSYPFSDAQCCQM 120

Query: 530 ---------LPHFYGLHHARMPLPLEMEAEPVYVNAKQYHGILRRRQSRAKAELEKKVIR 589
                    LPHFYGLHHARMPLPLEMEAEPVYVNAKQYHGILRRRQSRAKAELEKKVIR
Sbjct: 121 LTSYGPQTTLPHFYGLHHARMPLPLEMEAEPVYVNAKQYHGILRRRQSRAKAELEKKVIR 180

Query: 590 SRKPYLHESRHLHAMRRARGSGGRFLNTKKPNSVISNKTMEEDINSGINHVSEPVSEGGS 649
           SRKPYLHESRHLHAMRRARGSGGRFLNTKKPNSVISNKTMEEDINSGINHVSEPVSEGGS
Sbjct: 181 SRKPYLHESRHLHAMRRARGSGGRFLNTKKPNSVISNKTMEEDINSGINHVSEPVSEGGS 240

Query: 650 NYMVANENGMKDTLDDQQKEDKEFMPQNMQITHAFFNGGKSNGLGLSTYNSKLADESMQV 697
           NYMVANENGMKDTLDDQQKEDKEFMPQNMQITHAFFNGGKSNGLGLSTYNSKLADESMQV
Sbjct: 241 NYMVANENGMKDTLDDQQKEDKEFMPQNMQITHAFFNGGKSNGLGLSTYNSKLADESMQV 300

[Close]

BLAST of CmoCh08G005170 vs. NCBI nr
Match: XP_023515220.1 (nuclear transcription factor Y subunit A-4-like isoform X1 [Cucurbita pepo subsp. pepo])

HSP 1 Score: 553.9 bits (1426), Expect = 2.0e-153
Identity = 284/316 (89.87%), Postives = 287/316 (90.82%), Query Frame = 0


Query: 405 NKFQTMPSKPGIVEQEVADGAKYLLQSTKYSEPWWHGVGNNTITDEDATKTSSAEYLNVT 464
           NKFQTMPSKPGIVEQE ADGAKYLLQSTKYSEPWWHGVGNNTITDEDATKTSSAEYLNVT
Sbjct: 9   NKFQTMPSKPGIVEQEAADGAKYLLQSTKYSEPWWHGVGNNTITDEDATKTSSAEYLNVT 68

Query: 465 VTSAAMLSQANDENTGKEVQHLKYIPFSTSPSVGERLDPNSQMELVGHSI---------- 524
           VTSAAMLSQANDENTG+EVQHLKYIPFSTSP VGERLDPNSQMELVGHSI          
Sbjct: 69  VTSAAMLSQANDENTGQEVQHLKYIPFSTSPPVGERLDPNSQMELVGHSIVLTSYPFSDA 128

Query: 525 --------------LPHFYGLHHARMPLPLEMEAEPVYVNAKQYHGILRRRQSRAKAELE 584
                         LPHFYGLHHARMPLPLEMEAEPVYVNAKQYHGILRRRQSRAKAELE
Sbjct: 129 QCCQMLTSYGPQTTLPHFYGLHHARMPLPLEMEAEPVYVNAKQYHGILRRRQSRAKAELE 188

Query: 585 KKVIRSRKPYLHESRHLHAMRRARGSGGRFLNTKKPNSVISNKTMEEDINSGINHVSEPV 644
           KKVI+SRKPYLHESRHLHAMRRARGSGGRFLNTKKPNSVISNKTMEEDINS INHVSEPV
Sbjct: 189 KKVIKSRKPYLHESRHLHAMRRARGSGGRFLNTKKPNSVISNKTMEEDINSSINHVSEPV 248

Query: 645 SEGGSNYMVANENGMKDTLDDQQKEDKEFMPQNMQITHAFFNGGKSNGLGLSTYNSKLAD 697
           SEG SNYMVANENGMKDTLDDQQKEDKEFMPQNMQITHAFFNGGKSNG GLSTYNSKLAD
Sbjct: 249 SEGRSNYMVANENGMKDTLDDQQKEDKEFMPQNMQITHAFFNGGKSNGHGLSTYNSKLAD 308

[Close]

BLAST of CmoCh08G005170 vs. TAIR 10
Match: AT4G15030.1 (CONTAINS InterPro DOMAIN/s: Folate-sensitive fragile site protein Fra10Ac1 (InterPro:IPR019129); Has 8455 Blast hits to 5700 proteins in 376 species: Archae - 6; Bacteria - 264; Metazoa - 3820; Fungi - 744; Plants - 645; Viruses - 76; Other Eukaryotes - 2900 (source: NCBI BLink). )

HSP 1 Score: 206.5 bits (524), Expect = 7.2e-53
Identity = 107/156 (68.59%), Postives = 126/156 (80.77%), Query Frame = 0


Query: 186 YGFIRSEEDDMDTSWEQKLVKRYYDKLFKEYPIYCIADMTQYKSGKIGLRWRVEKEVMSG 245
           Y FIRSEEDD+D SWEQ+LVKRYYDKLFKE   YCIADM++YK+GK+GLRWR EKEVM+G
Sbjct: 68  YRFIRSEEDDLDPSWEQRLVKRYYDKLFKE---YCIADMSRYKTGKMGLRWRTEKEVMTG 127

Query: 246 KGQFICGNKHCDEKDGLASYEVNFSYFEAGENKQALVKLVTCERCSKKLHYKRNKEKEKL 305
           KGQF+CG+KHCDEK+GLASYEVNFSY EAGE+KQALVKLV CERC++KL+YK+ KE E+ 
Sbjct: 128 KGQFMCGSKHCDEKEGLASYEVNFSYHEAGEDKQALVKLVACERCAEKLYYKKRKEGERS 187

Query: 306 ERMEQEMSKRKRPSDDSSDSEDAGSRTRRRKGTNRS 342
           E  E++  KRKR     S SED      +RK   RS
Sbjct: 188 ESKEKKKQKRKR---SKSHSEDDTDEEEKRKEGERS 217

[Close]

BLAST of CmoCh08G005170 vs. TAIR 10
Match: AT4G15030.2 (FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: cellular_component unknown; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Folate-sensitive fragile site protein Fra10Ac1 (InterPro:IPR019129); Has 8498 Blast hits to 5699 proteins in 376 species: Archae - 6; Bacteria - 264; Metazoa - 3838; Fungi - 743; Plants - 650; Viruses - 76; Other Eukaryotes - 2921 (source: NCBI BLink). )

HSP 1 Score: 206.5 bits (524), Expect = 7.2e-53
Identity = 107/156 (68.59%), Postives = 126/156 (80.77%), Query Frame = 0


Query: 186 YGFIRSEEDDMDTSWEQKLVKRYYDKLFKEYPIYCIADMTQYKSGKIGLRWRVEKEVMSG 245
           Y FIRSEEDD+D SWEQ+LVKRYYDKLFKE   YCIADM++YK+GK+GLRWR EKEVM+G
Sbjct: 72  YRFIRSEEDDLDPSWEQRLVKRYYDKLFKE---YCIADMSRYKTGKMGLRWRTEKEVMTG 131

Query: 246 KGQFICGNKHCDEKDGLASYEVNFSYFEAGENKQALVKLVTCERCSKKLHYKRNKEKEKL 305
           KGQF+CG+KHCDEK+GLASYEVNFSY EAGE+KQALVKLV CERC++KL+YK+ KE E+ 
Sbjct: 132 KGQFMCGSKHCDEKEGLASYEVNFSYHEAGEDKQALVKLVACERCAEKLYYKKRKEGERS 191

Query: 306 ERMEQEMSKRKRPSDDSSDSEDAGSRTRRRKGTNRS 342
           E  E++  KRKR     S SED      +RK   RS
Sbjct: 192 ESKEKKKQKRKR---SKSHSEDDTDEEEKRKEGERS 221

[Close]

BLAST of CmoCh08G005170 vs. TAIR 10
Match: AT3G20910.1 (nuclear factor Y, subunit A9 )

HSP 1 Score: 121.3 bits (303), Expect = 3.0e-27
Identity = 67/107 (62.62%), Postives = 79/107 (73.83%), Query Frame = 0


Query: 520 GLHHARMPLPLEMEAEPVYVNAKQYHGILRRRQSRAKAELEKKVIRSRKPYLHESRHLHA 579
           G+ H+RMPLP EM  EPV+VNAKQY  ILRRRQ+RAKAELEKK+I+SRKPYLHESRH HA
Sbjct: 151 GMPHSRMPLPPEMAQEPVFVNAKQYQAILRRRQARAKAELEKKLIKSRKPYLHESRHQHA 210

Query: 580 MRRARGSGGRFLNTKKPNSVISNKTMEEDINSGINHVSEPVSEGGSN 627
           MRR RG+GGRF   KK N+  S +  EE  N    HV++  S   S+
Sbjct: 211 MRRPRGTGGRF--AKKTNTEASKRKAEEKSN---GHVTQSPSSSNSD 252

[Close]

BLAST of CmoCh08G005170 vs. TAIR 10
Match: AT5G12840.2 (nuclear factor Y, subunit A1 )

HSP 1 Score: 117.5 bits (293), Expect = 4.4e-26
Identity = 91/226 (40.27%), Postives = 108/226 (47.79%), Query Frame = 0


Query: 410 MPSKPGIVEQEVADGAKYLLQSTKYSEPWW----HGVGNNTITDEDATKTSSAEYLNVT- 469
           M SKPG   +E  +    + Q   Y+EPWW     GV          + +SS +  N + 
Sbjct: 1   MQSKPGRENEEEVNNHHAVQQPMMYAEPWWKNNSFGVVPQARPSGIPSNSSSLDCPNGSE 60

Query: 470 ---VTSAAMLSQANDENTGKEVQHLKYIPFSTSPSVGERLDPNSQM------------EL 529
              V SA+     N EN G            +     E  DP   +            EL
Sbjct: 61  SNDVHSASEDGALNGENDGTWKDSQAATSSRSDNHGMEGNDPALSIRNMHDQPLVQPPEL 120

Query: 530 VGHSIL--------PHFYGLHHA-----------------RMPLPLEMEAEPVYVNAKQY 589
           VGH I         P++ GL  A                 R  LPL+M  EPVYVNAKQY
Sbjct: 121 VGHYIACVPNPYQDPYYGGLMGAYGHQQLGFRPYLGMPRERTALPLDMAQEPVYVNAKQY 180

Query: 590 HGILRRRQSRAKAELEKKVIRSRKPYLHESRHLHAMRRARGSGGRF 591
            GILRRR++RAKAELE+KVIR RKPYLHESRH HAMRRAR SGGRF
Sbjct: 181 EGILRRRKARAKAELERKVIRDRKPYLHESRHKHAMRRARASGGRF 226

[Close]

BLAST of CmoCh08G005170 vs. TAIR 10
Match: AT5G12840.4 (nuclear factor Y, subunit A1 )

HSP 1 Score: 117.5 bits (293), Expect = 4.4e-26
Identity = 91/226 (40.27%), Postives = 108/226 (47.79%), Query Frame = 0


Query: 410 MPSKPGIVEQEVADGAKYLLQSTKYSEPWW----HGVGNNTITDEDATKTSSAEYLNVT- 469
           M SKPG   +E  +    + Q   Y+EPWW     GV          + +SS +  N + 
Sbjct: 1   MQSKPGRENEEEVNNHHAVQQPMMYAEPWWKNNSFGVVPQARPSGIPSNSSSLDCPNGSE 60

Query: 470 ---VTSAAMLSQANDENTGKEVQHLKYIPFSTSPSVGERLDPNSQM------------EL 529
              V SA+     N EN G            +     E  DP   +            EL
Sbjct: 61  SNDVHSASEDGALNGENDGTWKDSQAATSSRSDNHGMEGNDPALSIRNMHDQPLVQPPEL 120

Query: 530 VGHSIL--------PHFYGLHHA-----------------RMPLPLEMEAEPVYVNAKQY 589
           VGH I         P++ GL  A                 R  LPL+M  EPVYVNAKQY
Sbjct: 121 VGHYIACVPNPYQDPYYGGLMGAYGHQQLGFRPYLGMPRERTALPLDMAQEPVYVNAKQY 180

Query: 590 HGILRRRQSRAKAELEKKVIRSRKPYLHESRHLHAMRRARGSGGRF 591
            GILRRR++RAKAELE+KVIR RKPYLHESRH HAMRRAR SGGRF
Sbjct: 181 EGILRRRKARAKAELERKVIRDRKPYLHESRHKHAMRRARASGGRF 226

The following BLAST results are available for this feature:

BLAST of CmoCh08G005170 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
Q70Z53	2.9e-35	49.07	Protein FRA10AC1 OS=Homo sapiens OX=9606 GN=FRA10AC1 PE=1 SV=3	[more]
Q5FVF1	3.3e-34	47.31	Protein FRA10AC1 homolog OS=Rattus norvegicus OX=10116 GN=Fra10ac1 PE=1 SV=1	[more]
Q8BP78	9.5e-34	47.31	Protein FRA10AC1 homolog OS=Mus musculus OX=10090 GN=Fra10ac1 PE=1 SV=3	[more]
Q945M9	4.3e-26	62.62	Nuclear transcription factor Y subunit A-9 OS=Arabidopsis thaliana OX=3702 GN=NF...	[more]
Q9LXV5	8.0e-25	37.89	Nuclear transcription factor Y subunit A-1 OS=Arabidopsis thaliana OX=3702 GN=NF...	[more]

BLAST of CmoCh08G005170 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A6J1HB71	1.7e-158	92.41	Nuclear transcription factor Y subunit OS=Cucurbita moschata OX=3662 GN=LOC11146...	[more]
A0A6J1H7S4	3.0e-155	92.28	Nuclear transcription factor Y subunit OS=Cucurbita moschata OX=3662 GN=LOC11146...	[more]
A0A6J1L019	5.1e-139	89.24	Nuclear transcription factor Y subunit OS=Cucurbita maxima OX=3661 GN=LOC1114978...	[more]
A0A6J1KWS3	8.9e-136	89.05	Nuclear transcription factor Y subunit OS=Cucurbita maxima OX=3661 GN=LOC1114978...	[more]
A0A6J1JU93	5.8e-119	76.69	Nuclear transcription factor Y subunit OS=Cucurbita maxima OX=3661 GN=LOC1114884...	[more]

BLAST of CmoCh08G005170 vs. NCBI nr


Match Name	E-value	Identity	Description
KAG6593299.1	3.8e-189	81.99	Nuclear transcription factor Y subunit A-9, partial [Cucurbita argyrosperma subs...	[more]
XP_022960498.1	3.5e-158	92.41	nuclear transcription factor Y subunit A-1-like isoform X1 [Cucurbita moschata] ...	[more]
KAG7025650.1	1.9e-156	91.46	Nuclear transcription factor Y subunit A-9 [Cucurbita argyrosperma subsp. argyro...	[more]
XP_022960500.1	6.1e-155	92.28	nuclear transcription factor Y subunit A-1-like isoform X2 [Cucurbita moschata] ...	[more]
XP_023515220.1	2.0e-153	89.87	nuclear transcription factor Y subunit A-4-like isoform X1 [Cucurbita pepo subsp...	[more]

BLAST of CmoCh08G005170 vs. TAIR 10


Match Name	E-value	Identity	Description
AT4G15030.1	7.2e-53	68.59	CONTAINS InterPro DOMAIN/s: Folate-sensitive fragile site protein Fra10Ac1 (Inte...	[more]
AT4G15030.2	7.2e-53	68.59	FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknow...	[more]
AT3G20910.1	3.0e-27	62.62	nuclear factor Y, subunit A9	[more]
AT5G12840.2	4.4e-26	40.27	nuclear factor Y, subunit A1	[more]
AT5G12840.4	4.4e-26	40.27	nuclear factor Y, subunit A1	[more]

InterPro

Analysis Name: InterPro Annotations of Cucurbita moschata (Rifu) v1
Date Performed: 2021-10-25


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	COILS	Coil	Coil	coord: 291..311
None	No IPR available	GENE3D	6.10.250.2430		coord: 534..594 e-value: 2.9E-30 score: 106.4
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 301..334
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 301..337
None	No IPR available	PANTHER	PTHR12632:SF57	TRANSCRIPTION FACTOR Y SUBUNIT A-1, PUTATIVE-RELATED	coord: 515..680 coord: 468..514
IPR001289	Nuclear transcription factor Y subunit A	PRINTS	PR00616	CCAATSUBUNTB	coord: 536..558 score: 77.29 coord: 567..590 score: 81.71
IPR001289	Nuclear transcription factor Y subunit A	SMART	SM00521	cbf3	coord: 532..593 e-value: 1.4E-36 score: 137.6
IPR001289	Nuclear transcription factor Y subunit A	PFAM	PF02045	CBFB_NFYA	coord: 535..590 e-value: 8.2E-26 score: 90.4
IPR001289	Nuclear transcription factor Y subunit A	PANTHER	PTHR12632	TRANSCRIPTION FACTOR NF-Y ALPHA-RELATED	coord: 515..680 coord: 468..514
IPR001289	Nuclear transcription factor Y subunit A	PROSITE	PS51152	NFYA_HAP2_2	coord: 533..593 score: 38.275795
IPR019129	Folate-sensitive fragile site protein Fra10Ac1	PFAM	PF09725	Fra10Ac1	coord: 186..296 e-value: 8.8E-43 score: 145.4
IPR018362	CCAAT-binding factor, conserved site	PROSITE	PS00686	NFYA_HAP2_1	coord: 538..558

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
CmoCh08G005170.1	CmoCh08G005170.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0006357	regulation of transcription by RNA polymerase II
biological_process	GO:0006355	regulation of transcription, DNA-templated
cellular_component	GO:0016602	CCAAT-binding factor complex
molecular_function	GO:0000981	DNA-binding transcription factor activity, RNA polymerase II-specific
molecular_function	GO:0000978	RNA polymerase II cis-regulatory region sequence-specific DNA binding
molecular_function	GO:0003677	DNA binding
molecular_function	GO:0003700	DNA-binding transcription factor activity