CmoCh08G005120 (gene) Cucurbita moschata (Rifu) v1

Overview
NameCmoCh08G005120
Typegene
OrganismCucurbita moschata (Cucurbita moschata (Rifu) v1)
Descriptionprotein TAB2 homolog, chloroplastic
LocationCmo_Chr08: 3205413 .. 3207695 (-)
RNA-Seq ExpressionCmoCh08G005120
SyntenyCmoCh08G005120
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonfive_prime_UTRpolypeptideCDSthree_prime_UTR
Hold the cursor over a type above to highlight its positions in the sequence below.
CAGATTTTCAGTAACGATATTTTGTGGCGGAAAAAAAACGAACAAAACTGGCTTCTCTCTCTCTTACAAAGCTTATCTTACTGAGAGAGCTCCACTTCCATGGCGACCTTAAGCTTCAACCCCACTAGAATAAGAACCCCAGGGGGGCTTCACCTTTGCAAACCGAAACCTAGATCGTTACCATTTTCACAGTCGATTAAAACCCCGAAAAGATTCTCAGCCGATTTCCGTATCAATCAACAACTACTACGTCGTTTTCGATCGAATTCTGTATCGGAAAGCTCGATTTCGGTGCCGGAAGAGGTGGAGGTGGCGGTGGACGAGGATGAGGATGATCCGACTTTGGAGTTGGCCTATTTGGATTCGGAGACAGATCCTGAGAGTATTACGGAGTGGGAGCTGGATTTCTGCTCGAGACCTATTTTGGATATCAGAGGGAAGAAGGTGTGGGAGCTTGTAGCGTGTGATAATTCGCTCTCGCTTCAGTACACGAAGTATTTTCCTAACAATGTTATTAATAGCATTACTCTGAGAGATGCGATTTCTTCGATTACTGAAGAGTTGGGGGTGCCATTACCAGAGAAAATCCGCTTCTTCAGGTACATGTTCTGATTGATTAAGCTCATTTGGATGAATCTTGTGTTCATGCATTTCAACTTCAAAATGTGTCTGAATTTGTGTCAAAAAAACCTATGATTGAGTAGCAATTTATTCGAGAATGGTGTCTCTGTCTTCATATGATAGAAATTTTGATGGGATTATAGGTCACAGATGCAGACAATTATTACAAAAGCATGTACCGAGCTTGGCGTAAAGCCCATTCCAAGTAAAAGGGTATATGAATTTATAGGTGTTATATTCACTTCAGTTTCTTGGTGAAGTAGATTGGATTTAGATTATGGATTAAACTCTCTGAGCTCAAGATTTTCCATTGCTCTATCAGTGTCTTTCCCTGCTTTTATGGCTGGAAGAACGATACGAGACTGTCTACACGCGTCATCCAGGTTTTCAGAAAGGGTCCAAGCCCCTCCTTGCATTAGATAATCCATTTCCAATGGAACTCCCAGACAATCTTTTCGGGGAGAGGTGGGCATTTGTTCAATTGCCCTTTTCAGGTAAACCAATAGCTTTTCTTCTTTATTTTGTGTTGACTCTAAACATGGCTGAAGAGTTGCTGCTTTACTACAGGATGTTGCCTATTGTTCTTATAGTTTCTCCAATAATAATTTGATCCTCCATTGATTCTCAGCTGTTCAAGAGGAGGTCTCAAACTTAAATGCAAGTTTTATGTTTGGCTCCAGTCTTGATCTGGATTTACTGGGGATCGAAATTGATGACAATACAATGATCCCAGGGTTGTCTGTTGCATCTTCACGAGCTCAACCATTGGCAGGTATACCACCACTTTAAAACCAGTTGAGCTTTGGTGATTCGGAACATATATAAACAAATGATTCACAACAAATTCGTTAATCATTCTAATTTCAATTTTCCGAGTCGATTAGATTTTTCTTCCCGAAATTTTTATACACCTATCATCGTAGTATAAAATATTTCTTTACAATCATATCGTCCATCATGAAGATTTTGTAATGTAAGAAATTGAACTCTCTGTTTCATACATGTTCCCCAAACAATACTCGCAGTATGATGAGTATAAACAATCTGCCATTTGATCTCTTTTTGTATCATTCCACAGCTTGGATGAATGGAATGGAAGTATATTCAGTTGAAGCCGATACCTCTCGTGCTTGTTTGATTCTATCCGTTGGGATCTCGACTCGATATGTCTATGCTACTTATAAAAAAAATCCAGTGACAACTGCTGAGGCTGAAGCTTGGGAAGCAGCAAAAAAGGCTTGTGGAGGCTTGCATTTTCTTGCCATACAAGACGACTTGGATTCAGAGGACTGTGTTGGATTCTGGCTCCTACTAGACTTGCCACCGCCGCCAGTATAATCAGTGAAGTAGTTTCAAAATTTTCTTTTTCGCTTTAAGAAGGTAGTTAGTCGTATAAAGCATGTTAAATTTTGTAACTTGATTATTTGTTGGTTGTACAAACAAATGCATAATATAGGATAATGTTCACTTCTGGGAGATGGGATTGTTGAGCAAAGTTCTAGACCGGCAAAACTTGTGTTTGCCAATAAAAAAAAGATAAAGAAACGTGTGTTTTGTTCAATGTATCTGTTGGACGTTGAATGTGAGATCACACATTGGTTGGAGAACAAAACAAAGCATTCTTTGTTCTTTGTAAGGGTGTGGAAACCTCTCCCTAGCCGA

mRNA sequence

CAGATTTTCAGTAACGATATTTTGTGGCGGAAAAAAAACGAACAAAACTGGCTTCTCTCTCTCTTACAAAGCTTATCTTACTGAGAGAGCTCCACTTCCATGGCGACCTTAAGCTTCAACCCCACTAGAATAAGAACCCCAGGGGGGCTTCACCTTTGCAAACCGAAACCTAGATCGTTACCATTTTCACAGTCGATTAAAACCCCGAAAAGATTCTCAGCCGATTTCCGTATCAATCAACAACTACTACGTCGTTTTCGATCGAATTCTGTATCGGAAAGCTCGATTTCGGTGCCGGAAGAGGTGGAGGTGGCGGTGGACGAGGATGAGGATGATCCGACTTTGGAGTTGGCCTATTTGGATTCGGAGACAGATCCTGAGAGTATTACGGAGTGGGAGCTGGATTTCTGCTCGAGACCTATTTTGGATATCAGAGGGAAGAAGGTGTGGGAGCTTGTAGCGTGTGATAATTCGCTCTCGCTTCAGTACACGAAGTATTTTCCTAACAATGTTATTAATAGCATTACTCTGAGAGATGCGATTTCTTCGATTACTGAAGAGTTGGGGGTGCCATTACCAGAGAAAATCCGCTTCTTCAGGTCACAGATGCAGACAATTATTACAAAAGCATGTACCGAGCTTGGCGTAAAGCCCATTCCAAGTAAAAGGTGTCTTTCCCTGCTTTTATGGCTGGAAGAACGATACGAGACTGTCTACACGCGTCATCCAGGTTTTCAGAAAGGGTCCAAGCCCCTCCTTGCATTAGATAATCCATTTCCAATGGAACTCCCAGACAATCTTTTCGGGGAGAGGTGGGCATTTGTTCAATTGCCCTTTTCAGCTGTTCAAGAGGAGGTCTCAAACTTAAATGCAAGTTTTATGTTTGGCTCCAGTCTTGATCTGGATTTACTGGGGATCGAAATTGATGACAATACAATGATCCCAGGGTTGTCTGTTGCATCTTCACGAGCTCAACCATTGGCAGCTTGGATGAATGGAATGGAAGTATATTCAGTTGAAGCCGATACCTCTCGTGCTTGTTTGATTCTATCCGTTGGGATCTCGACTCGATATGTCTATGCTACTTATAAAAAAAATCCAGTGACAACTGCTGAGGCTGAAGCTTGGGAAGCAGCAAAAAAGGCTTGTGGAGGCTTGCATTTTCTTGCCATACAAGACGACTTGGATTCAGAGGACTGTGTTGGATTCTGGCTCCTACTAGACTTGCCACCGCCGCCAGTATAATCAGTGAAGTAGTTTCAAAATTTTCTTTTTCGCTTTAAGAAGGTAGTTAGTCGTATAAAGCATGTTAAATTTTGTAACTTGATTATTTGTTGGTTGTACAAACAAATGCATAATATAGGATAATGTTCACTTCTGGGAGATGGGATTGTTGAGCAAAGTTCTAGACCGGCAAAACTTGTGTTTGCCAATAAAAAAAAGATAAAGAAACGTGTGTTTTGTTCAATGTATCTGTTGGACGTTGAATGTGAGATCACACATTGGTTGGAGAACAAAACAAAGCATTCTTTGTTCTTTGTAAGGGTGTGGAAACCTCTCCCTAGCCGA

Coding sequence (CDS)

ATGGCGACCTTAAGCTTCAACCCCACTAGAATAAGAACCCCAGGGGGGCTTCACCTTTGCAAACCGAAACCTAGATCGTTACCATTTTCACAGTCGATTAAAACCCCGAAAAGATTCTCAGCCGATTTCCGTATCAATCAACAACTACTACGTCGTTTTCGATCGAATTCTGTATCGGAAAGCTCGATTTCGGTGCCGGAAGAGGTGGAGGTGGCGGTGGACGAGGATGAGGATGATCCGACTTTGGAGTTGGCCTATTTGGATTCGGAGACAGATCCTGAGAGTATTACGGAGTGGGAGCTGGATTTCTGCTCGAGACCTATTTTGGATATCAGAGGGAAGAAGGTGTGGGAGCTTGTAGCGTGTGATAATTCGCTCTCGCTTCAGTACACGAAGTATTTTCCTAACAATGTTATTAATAGCATTACTCTGAGAGATGCGATTTCTTCGATTACTGAAGAGTTGGGGGTGCCATTACCAGAGAAAATCCGCTTCTTCAGGTCACAGATGCAGACAATTATTACAAAAGCATGTACCGAGCTTGGCGTAAAGCCCATTCCAAGTAAAAGGTGTCTTTCCCTGCTTTTATGGCTGGAAGAACGATACGAGACTGTCTACACGCGTCATCCAGGTTTTCAGAAAGGGTCCAAGCCCCTCCTTGCATTAGATAATCCATTTCCAATGGAACTCCCAGACAATCTTTTCGGGGAGAGGTGGGCATTTGTTCAATTGCCCTTTTCAGCTGTTCAAGAGGAGGTCTCAAACTTAAATGCAAGTTTTATGTTTGGCTCCAGTCTTGATCTGGATTTACTGGGGATCGAAATTGATGACAATACAATGATCCCAGGGTTGTCTGTTGCATCTTCACGAGCTCAACCATTGGCAGCTTGGATGAATGGAATGGAAGTATATTCAGTTGAAGCCGATACCTCTCGTGCTTGTTTGATTCTATCCGTTGGGATCTCGACTCGATATGTCTATGCTACTTATAAAAAAAATCCAGTGACAACTGCTGAGGCTGAAGCTTGGGAAGCAGCAAAAAAGGCTTGTGGAGGCTTGCATTTTCTTGCCATACAAGACGACTTGGATTCAGAGGACTGTGTTGGATTCTGGCTCCTACTAGACTTGCCACCGCCGCCAGTATAA

Protein sequence

MATLSFNPTRIRTPGGLHLCKPKPRSLPFSQSIKTPKRFSADFRINQQLLRRFRSNSVSESSISVPEEVEVAVDEDEDDPTLELAYLDSETDPESITEWELDFCSRPILDIRGKKVWELVACDNSLSLQYTKYFPNNVINSITLRDAISSITEELGVPLPEKIRFFRSQMQTIITKACTELGVKPIPSKRCLSLLLWLEERYETVYTRHPGFQKGSKPLLALDNPFPMELPDNLFGERWAFVQLPFSAVQEEVSNLNASFMFGSSLDLDLLGIEIDDNTMIPGLSVASSRAQPLAAWMNGMEVYSVEADTSRACLILSVGISTRYVYATYKKNPVTTAEAEAWEAAKKACGGLHFLAIQDDLDSEDCVGFWLLLDLPPPPV
Homology
BLAST of CmoCh08G005120 vs. ExPASy Swiss-Prot
Match: Q9SFB3 (Protein TAB2 homolog, chloroplastic OS=Arabidopsis thaliana OX=3702 GN=ATAB2 PE=2 SV=1)

HSP 1 Score: 565.5 bits (1456), Expect = 4.7e-160
Identity = 278/381 (72.97%), Postives = 327/381 (85.83%), Query Frame = 0

Query: 1   MATLSFNPTRIRTPGGLHLCKPKPRSLPFSQSIKTPKRFSADFRINQQLLRRFRSNSVSE 60
           MATL FN  RI+TP    +  PKP S  F++ IKT   FS++  + +    RF S S+ E
Sbjct: 1   MATLGFNTRRIQTPSLPRI--PKPSS--FTKPIKTHHLFSSETLLKR---CRFVSRSLPE 60

Query: 61  SSISVPEEVEVAVDEDEDDPTLELAYLDSETDPESITEWELDFCSRPILDIRGKKVWELV 120
           SS+S+ +E EVA + +EDDPT EL+YLD E+D +SI EWELDFCSRPILD RGKK+WELV
Sbjct: 61  SSLSITKEQEVANEVEEDDPTSELSYLDPESDADSIKEWELDFCSRPILDSRGKKIWELV 120

Query: 121 ACDNSLSLQYTKYFPNNVINSITLRDAISSITEELGVPLPEKIRFFRSQMQTIITKACTE 180
            CD SLSLQ TKYFPNNVINSITL+DAI +IT++LGVPLPEKIRFFRSQMQTIITKAC E
Sbjct: 121 VCDASLSLQVTKYFPNNVINSITLKDAIVTITQDLGVPLPEKIRFFRSQMQTIITKACKE 180

Query: 181 LGVKPIPSKRCLSLLLWLEERYETVYTRHPGFQKGSKPLLALDNPFPMELPDNLFGERWA 240
           L +K +PSKRCLSL LWL+ERY+TVYTRHPGFQKGS PLL+LDNPFPM LP+NLFGE+WA
Sbjct: 181 LAIKAVPSKRCLSLFLWLQERYDTVYTRHPGFQKGSLPLLSLDNPFPMNLPENLFGEKWA 240

Query: 241 FVQLPFSAVQEEVSNLNASFMFGSSLDLDLLGIEIDDNTMIPGLSVASSRAQPLAAWMNG 300
           FVQLP+SAV+EE+S+ +  F+FG+SLDLDLLGIE+D+NT+IPGLSVA+SRA+PLAAWMNG
Sbjct: 241 FVQLPYSAVREEISDFDEKFVFGASLDLDLLGIEVDENTLIPGLSVATSRAKPLAAWMNG 300

Query: 301 MEVYSVEADTSRACLILSVGISTRYVYATYKKNPVTTAEAEAWEAAKKACGGLHFLAIQD 360
           +EV S+EAD+S+ CLILSVGI+TRYVYATYKK PVTT EAEAWE+AKK  GGLHFLAIQD
Sbjct: 301 LEVCSIEADSSKGCLILSVGIATRYVYATYKKTPVTTDEAEAWESAKKTSGGLHFLAIQD 360

Query: 361 DLDSEDCVGFWLLLDLPPPPV 382
           DLDS+DCVGFWLL+DLPPPPV
Sbjct: 361 DLDSDDCVGFWLLIDLPPPPV 374

BLAST of CmoCh08G005120 vs. ExPASy Swiss-Prot
Match: B4FTR7 (Protein TAB2 homolog, chloroplastic OS=Zea mays OX=4577 GN=TAB2 PE=2 SV=1)

HSP 1 Score: 489.6 bits (1259), Expect = 3.3e-137
Identity = 231/355 (65.07%), Postives = 288/355 (81.13%), Query Frame = 0

Query: 27  LPFSQSIKTPKRFSADFRINQQLLRRFRSNSVSESSISVPEEVEVAVDEDEDDPTLELAY 86
           +P S S ++P+R            R   S S +E+S +     E    E++ DP  E+ Y
Sbjct: 47  VPASPSPRSPRR-----------CRSISSESSTEASAAADIADEEVEAENKVDPQAEVCY 106

Query: 87  LDSETDPESITEWELDFCSRPILDIRGKKVWELVACDNSLSLQYTKYFPNNVINSITLRD 146
           LD + DPESI EWELDFCSRPILD RGKKVWELV CD +LSLQ+T+YFPNN INS+TLRD
Sbjct: 107 LDPDVDPESIREWELDFCSRPILDARGKKVWELVVCDATLSLQFTRYFPNNAINSVTLRD 166

Query: 147 AISSITEELGVPLPEKIRFFRSQMQTIITKACTELGVKPIPSKRCLSLLLWLEERYETVY 206
           A++S++E LGVP+P+++RFFRSQMQTIIT+AC +LGVK +PS+RC+SLLLWLEERYE VY
Sbjct: 167 ALASVSEALGVPMPDRVRFFRSQMQTIITRACGDLGVKAVPSRRCVSLLLWLEERYEVVY 226

Query: 207 TRHPGFQKGSKPLLALDNPFPMELPDNLFGERWAFVQLPFSAVQEEVSNLNASFMFGSSL 266
           +RHPGFQ G++PLLALDNPFP  LP+NLFG++WAFVQLPFSAV+EEV +L   + FG+ L
Sbjct: 227 SRHPGFQAGTRPLLALDNPFPTTLPENLFGDKWAFVQLPFSAVREEVESLERRYAFGAGL 286

Query: 267 DLDLLGIEIDDNTMIPGLSVASSRAQPLAAWMNGMEVYSVEADTSRACLILSVGISTRYV 326
           DL+LLG E+DD T++PG++V SSRA+PLAAWMNG+E+ ++EADT RA LILS G+STRYV
Sbjct: 287 DLELLGFELDDTTLVPGVAVESSRAKPLAAWMNGLEICAMEADTGRASLILSAGVSTRYV 346

Query: 327 YATYKKNPVTTAEAEAWEAAKKACGGLHFLAIQDDLDSEDCVGFWLLLDLPPPPV 382
           Y+ Y+K   +T EAEAWEAAKKACGGLHFLAIQ++L+S+ CVGFWLLLDLPPPPV
Sbjct: 347 YSGYQKTAASTQEAEAWEAAKKACGGLHFLAIQENLNSDGCVGFWLLLDLPPPPV 390

BLAST of CmoCh08G005120 vs. ExPASy Swiss-Prot
Match: Q6K9C1 (Protein TAB2 homolog, chloroplastic OS=Oryza sativa subsp. japonica OX=39947 GN=Os02g0610800 PE=2 SV=1)

HSP 1 Score: 483.8 bits (1244), Expect = 1.8e-135
Identity = 227/329 (69.00%), Postives = 276/329 (83.89%), Query Frame = 0

Query: 56  NSVSESSISVPEEVEVA---VDEDEDDPTLELAYLDSETDPESITEWELDFCSRPILDIR 115
           +S + ++ +  +E EV     +E+E DP  E+ YLD E D E I EWELDFCSRPILD R
Sbjct: 64  SSTAAAADTADDEEEVTKSDSEEEEMDPLAEVCYLDPEADAEGIREWELDFCSRPILDAR 123

Query: 116 GKKVWELVACDNSLSLQYTKYFPNNVINSITLRDAISSITEELGVPLPEKIRFFRSQMQT 175
           GKKVWELV CD +LSLQ+T++FPN  INS+TLRDA++S+   LGVPLP++ RFFRSQMQT
Sbjct: 124 GKKVWELVVCDATLSLQFTRFFPNTSINSVTLRDALASVATSLGVPLPDRARFFRSQMQT 183

Query: 176 IITKACTELGVKPIPSKRCLSLLLWLEERYETVYTRHPGFQKGSKPLLALDNPFPMELPD 235
           II++AC ELGVK +PS+RC+SLLLWLEERYETVY+RHPGFQ G+KPLL LDNPFP  LP+
Sbjct: 184 IISRACNELGVKAVPSRRCVSLLLWLEERYETVYSRHPGFQSGTKPLLTLDNPFPTSLPE 243

Query: 236 NLFGERWAFVQLPFSAVQEEVSNLNASFMFGSSLDLDLLGIEIDDNTMIPGLSVASSRAQ 295
           NLFG++WAFVQLPFSAV+EEV +L   + FG+ LDLDLLG E+D+NT+IPG++V SSRA+
Sbjct: 244 NLFGDKWAFVQLPFSAVREEVESLERRYAFGAGLDLDLLGFELDENTLIPGVAVESSRAK 303

Query: 296 PLAAWMNGMEVYSVEADTSRACLILSVGISTRYVYATYKKNPVTTAEAEAWEAAKKACGG 355
           PLAAWMNG+E+ S+E DT RA LILS G+STRYVYA Y+K+  TT EAEAWEAAKKACGG
Sbjct: 304 PLAAWMNGLEICSMEVDTGRANLILSAGVSTRYVYAGYQKSAATTQEAEAWEAAKKACGG 363

Query: 356 LHFLAIQDDLDSEDCVGFWLLLDLPPPPV 382
           LHFLAIQ++L+S+ CVGFWLLLDLPPPPV
Sbjct: 364 LHFLAIQENLNSDGCVGFWLLLDLPPPPV 392

BLAST of CmoCh08G005120 vs. ExPASy TrEMBL
Match: A0A6J1H921 (protein TAB2 homolog, chloroplastic OS=Cucurbita moschata OX=3662 GN=LOC111460742 PE=4 SV=1)

HSP 1 Score: 768.8 bits (1984), Expect = 1.0e-218
Identity = 381/381 (100.00%), Postives = 381/381 (100.00%), Query Frame = 0

Query: 1   MATLSFNPTRIRTPGGLHLCKPKPRSLPFSQSIKTPKRFSADFRINQQLLRRFRSNSVSE 60
           MATLSFNPTRIRTPGGLHLCKPKPRSLPFSQSIKTPKRFSADFRINQQLLRRFRSNSVSE
Sbjct: 1   MATLSFNPTRIRTPGGLHLCKPKPRSLPFSQSIKTPKRFSADFRINQQLLRRFRSNSVSE 60

Query: 61  SSISVPEEVEVAVDEDEDDPTLELAYLDSETDPESITEWELDFCSRPILDIRGKKVWELV 120
           SSISVPEEVEVAVDEDEDDPTLELAYLDSETDPESITEWELDFCSRPILDIRGKKVWELV
Sbjct: 61  SSISVPEEVEVAVDEDEDDPTLELAYLDSETDPESITEWELDFCSRPILDIRGKKVWELV 120

Query: 121 ACDNSLSLQYTKYFPNNVINSITLRDAISSITEELGVPLPEKIRFFRSQMQTIITKACTE 180
           ACDNSLSLQYTKYFPNNVINSITLRDAISSITEELGVPLPEKIRFFRSQMQTIITKACTE
Sbjct: 121 ACDNSLSLQYTKYFPNNVINSITLRDAISSITEELGVPLPEKIRFFRSQMQTIITKACTE 180

Query: 181 LGVKPIPSKRCLSLLLWLEERYETVYTRHPGFQKGSKPLLALDNPFPMELPDNLFGERWA 240
           LGVKPIPSKRCLSLLLWLEERYETVYTRHPGFQKGSKPLLALDNPFPMELPDNLFGERWA
Sbjct: 181 LGVKPIPSKRCLSLLLWLEERYETVYTRHPGFQKGSKPLLALDNPFPMELPDNLFGERWA 240

Query: 241 FVQLPFSAVQEEVSNLNASFMFGSSLDLDLLGIEIDDNTMIPGLSVASSRAQPLAAWMNG 300
           FVQLPFSAVQEEVSNLNASFMFGSSLDLDLLGIEIDDNTMIPGLSVASSRAQPLAAWMNG
Sbjct: 241 FVQLPFSAVQEEVSNLNASFMFGSSLDLDLLGIEIDDNTMIPGLSVASSRAQPLAAWMNG 300

Query: 301 MEVYSVEADTSRACLILSVGISTRYVYATYKKNPVTTAEAEAWEAAKKACGGLHFLAIQD 360
           MEVYSVEADTSRACLILSVGISTRYVYATYKKNPVTTAEAEAWEAAKKACGGLHFLAIQD
Sbjct: 301 MEVYSVEADTSRACLILSVGISTRYVYATYKKNPVTTAEAEAWEAAKKACGGLHFLAIQD 360

Query: 361 DLDSEDCVGFWLLLDLPPPPV 382
           DLDSEDCVGFWLLLDLPPPPV
Sbjct: 361 DLDSEDCVGFWLLLDLPPPPV 381

BLAST of CmoCh08G005120 vs. ExPASy TrEMBL
Match: A0A6J1KWL7 (protein TAB2 homolog, chloroplastic isoform X3 OS=Cucurbita maxima OX=3661 GN=LOC111497827 PE=4 SV=1)

HSP 1 Score: 760.4 bits (1962), Expect = 3.7e-216
Identity = 377/381 (98.95%), Postives = 378/381 (99.21%), Query Frame = 0

Query: 1   MATLSFNPTRIRTPGGLHLCKPKPRSLPFSQSIKTPKRFSADFRINQQLLRRFRSNSVSE 60
           MATLSFNPTRIRTPGGLHLCKPKPRSLPF QSIKT KRFSADFRINQQLL RFRSNSVSE
Sbjct: 1   MATLSFNPTRIRTPGGLHLCKPKPRSLPFPQSIKTAKRFSADFRINQQLLHRFRSNSVSE 60

Query: 61  SSISVPEEVEVAVDEDEDDPTLELAYLDSETDPESITEWELDFCSRPILDIRGKKVWELV 120
           SSISVPEEVEVAVDEDEDDPTLELAYLDSETDPESITEWELDFCSRPILDIRGKKVWELV
Sbjct: 61  SSISVPEEVEVAVDEDEDDPTLELAYLDSETDPESITEWELDFCSRPILDIRGKKVWELV 120

Query: 121 ACDNSLSLQYTKYFPNNVINSITLRDAISSITEELGVPLPEKIRFFRSQMQTIITKACTE 180
           ACDNSLSLQYTKYFPNNVINSITLRDAISSITEELGVPLPEKIRFFRSQMQTIITKACTE
Sbjct: 121 ACDNSLSLQYTKYFPNNVINSITLRDAISSITEELGVPLPEKIRFFRSQMQTIITKACTE 180

Query: 181 LGVKPIPSKRCLSLLLWLEERYETVYTRHPGFQKGSKPLLALDNPFPMELPDNLFGERWA 240
           LGVKPIPSKRCLSLLLWLEERYETVYTRHPGFQKGSKPLLALDNPFPMELPDNLFGERWA
Sbjct: 181 LGVKPIPSKRCLSLLLWLEERYETVYTRHPGFQKGSKPLLALDNPFPMELPDNLFGERWA 240

Query: 241 FVQLPFSAVQEEVSNLNASFMFGSSLDLDLLGIEIDDNTMIPGLSVASSRAQPLAAWMNG 300
           FVQLPFSAVQEEVSNLNASFMFGSSLDLDLLGIEIDDN+MIPGLSVASSRAQPLAAWMNG
Sbjct: 241 FVQLPFSAVQEEVSNLNASFMFGSSLDLDLLGIEIDDNSMIPGLSVASSRAQPLAAWMNG 300

Query: 301 MEVYSVEADTSRACLILSVGISTRYVYATYKKNPVTTAEAEAWEAAKKACGGLHFLAIQD 360
           MEVYSVEADTSRACLILSVGISTRYVYATYKKNPVTTAEAEAWEAAKKACGGLHFLAIQD
Sbjct: 301 MEVYSVEADTSRACLILSVGISTRYVYATYKKNPVTTAEAEAWEAAKKACGGLHFLAIQD 360

Query: 361 DLDSEDCVGFWLLLDLPPPPV 382
           DLDSEDCVGFWLLLDLPPPPV
Sbjct: 361 DLDSEDCVGFWLLLDLPPPPV 381

BLAST of CmoCh08G005120 vs. ExPASy TrEMBL
Match: A0A6J1KZX3 (protein TAB2 homolog, chloroplastic isoform X2 OS=Cucurbita maxima OX=3661 GN=LOC111497827 PE=4 SV=1)

HSP 1 Score: 755.4 bits (1949), Expect = 1.2e-214
Identity = 377/383 (98.43%), Postives = 378/383 (98.69%), Query Frame = 0

Query: 1   MATLSFNPTRIRTPGGLHLCKPKPRSLPFSQSIKTPKRFSADFRINQQLLRRFRSNSVSE 60
           MATLSFNPTRIRTPGGLHLCKPKPRSLPF QSIKT KRFSADFRINQQLL RFRSNSVSE
Sbjct: 1   MATLSFNPTRIRTPGGLHLCKPKPRSLPFPQSIKTAKRFSADFRINQQLLHRFRSNSVSE 60

Query: 61  SSISVPEEVEVAVDED--EDDPTLELAYLDSETDPESITEWELDFCSRPILDIRGKKVWE 120
           SSISVPEEVEVAVDED  EDDPTLELAYLDSETDPESITEWELDFCSRPILDIRGKKVWE
Sbjct: 61  SSISVPEEVEVAVDEDEAEDDPTLELAYLDSETDPESITEWELDFCSRPILDIRGKKVWE 120

Query: 121 LVACDNSLSLQYTKYFPNNVINSITLRDAISSITEELGVPLPEKIRFFRSQMQTIITKAC 180
           LVACDNSLSLQYTKYFPNNVINSITLRDAISSITEELGVPLPEKIRFFRSQMQTIITKAC
Sbjct: 121 LVACDNSLSLQYTKYFPNNVINSITLRDAISSITEELGVPLPEKIRFFRSQMQTIITKAC 180

Query: 181 TELGVKPIPSKRCLSLLLWLEERYETVYTRHPGFQKGSKPLLALDNPFPMELPDNLFGER 240
           TELGVKPIPSKRCLSLLLWLEERYETVYTRHPGFQKGSKPLLALDNPFPMELPDNLFGER
Sbjct: 181 TELGVKPIPSKRCLSLLLWLEERYETVYTRHPGFQKGSKPLLALDNPFPMELPDNLFGER 240

Query: 241 WAFVQLPFSAVQEEVSNLNASFMFGSSLDLDLLGIEIDDNTMIPGLSVASSRAQPLAAWM 300
           WAFVQLPFSAVQEEVSNLNASFMFGSSLDLDLLGIEIDDN+MIPGLSVASSRAQPLAAWM
Sbjct: 241 WAFVQLPFSAVQEEVSNLNASFMFGSSLDLDLLGIEIDDNSMIPGLSVASSRAQPLAAWM 300

Query: 301 NGMEVYSVEADTSRACLILSVGISTRYVYATYKKNPVTTAEAEAWEAAKKACGGLHFLAI 360
           NGMEVYSVEADTSRACLILSVGISTRYVYATYKKNPVTTAEAEAWEAAKKACGGLHFLAI
Sbjct: 301 NGMEVYSVEADTSRACLILSVGISTRYVYATYKKNPVTTAEAEAWEAAKKACGGLHFLAI 360

Query: 361 QDDLDSEDCVGFWLLLDLPPPPV 382
           QDDLDSEDCVGFWLLLDLPPPPV
Sbjct: 361 QDDLDSEDCVGFWLLLDLPPPPV 383

BLAST of CmoCh08G005120 vs. ExPASy TrEMBL
Match: A0A6J1KQS1 (protein TAB2 homolog, chloroplastic isoform X1 OS=Cucurbita maxima OX=3661 GN=LOC111497827 PE=4 SV=1)

HSP 1 Score: 750.7 bits (1937), Expect = 2.9e-213
Identity = 377/395 (95.44%), Postives = 378/395 (95.70%), Query Frame = 0

Query: 1   MATLSFNPTRIRTPGGLHLCKPKPRSLPFSQSIKTPKRFSADFRINQQLLRRFRSNSVSE 60
           MATLSFNPTRIRTPGGLHLCKPKPRSLPF QSIKT KRFSADFRINQQLL RFRSNSVSE
Sbjct: 1   MATLSFNPTRIRTPGGLHLCKPKPRSLPFPQSIKTAKRFSADFRINQQLLHRFRSNSVSE 60

Query: 61  SSISVPEEVEVAVDED--------------EDDPTLELAYLDSETDPESITEWELDFCSR 120
           SSISVPEEVEVAVDED              EDDPTLELAYLDSETDPESITEWELDFCSR
Sbjct: 61  SSISVPEEVEVAVDEDEDEDEAEAEAEAEAEDDPTLELAYLDSETDPESITEWELDFCSR 120

Query: 121 PILDIRGKKVWELVACDNSLSLQYTKYFPNNVINSITLRDAISSITEELGVPLPEKIRFF 180
           PILDIRGKKVWELVACDNSLSLQYTKYFPNNVINSITLRDAISSITEELGVPLPEKIRFF
Sbjct: 121 PILDIRGKKVWELVACDNSLSLQYTKYFPNNVINSITLRDAISSITEELGVPLPEKIRFF 180

Query: 181 RSQMQTIITKACTELGVKPIPSKRCLSLLLWLEERYETVYTRHPGFQKGSKPLLALDNPF 240
           RSQMQTIITKACTELGVKPIPSKRCLSLLLWLEERYETVYTRHPGFQKGSKPLLALDNPF
Sbjct: 181 RSQMQTIITKACTELGVKPIPSKRCLSLLLWLEERYETVYTRHPGFQKGSKPLLALDNPF 240

Query: 241 PMELPDNLFGERWAFVQLPFSAVQEEVSNLNASFMFGSSLDLDLLGIEIDDNTMIPGLSV 300
           PMELPDNLFGERWAFVQLPFSAVQEEVSNLNASFMFGSSLDLDLLGIEIDDN+MIPGLSV
Sbjct: 241 PMELPDNLFGERWAFVQLPFSAVQEEVSNLNASFMFGSSLDLDLLGIEIDDNSMIPGLSV 300

Query: 301 ASSRAQPLAAWMNGMEVYSVEADTSRACLILSVGISTRYVYATYKKNPVTTAEAEAWEAA 360
           ASSRAQPLAAWMNGMEVYSVEADTSRACLILSVGISTRYVYATYKKNPVTTAEAEAWEAA
Sbjct: 301 ASSRAQPLAAWMNGMEVYSVEADTSRACLILSVGISTRYVYATYKKNPVTTAEAEAWEAA 360

Query: 361 KKACGGLHFLAIQDDLDSEDCVGFWLLLDLPPPPV 382
           KKACGGLHFLAIQDDLDSEDCVGFWLLLDLPPPPV
Sbjct: 361 KKACGGLHFLAIQDDLDSEDCVGFWLLLDLPPPPV 395

BLAST of CmoCh08G005120 vs. ExPASy TrEMBL
Match: A0A5A7UYM5 (DUF1092 domain-containing protein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold339G00880 PE=4 SV=1)

HSP 1 Score: 699.5 bits (1804), Expect = 7.7e-198
Identity = 348/381 (91.34%), Postives = 362/381 (95.01%), Query Frame = 0

Query: 1   MATLSFNPTRIRTPGGLHLCKPKPRSLPFSQSIKTPKRFSADFRINQQLLRRFRSNSVSE 60
           MATLSFNPTRIRT  GLH  K KP S PFSQSIKT  RFSA+ RI+QQ LRRF+SNSVSE
Sbjct: 1   MATLSFNPTRIRTLVGLHFTKSKPISSPFSQSIKTANRFSANGRISQQPLRRFQSNSVSE 60

Query: 61  SSISVPEEVEVAVDEDEDDPTLELAYLDSETDPESITEWELDFCSRPILDIRGKKVWELV 120
           SS+SVPEEVE  ++EDEDDPTLE+AYLDSETDPESITEWELDFCSRPILDIRGKKVWELV
Sbjct: 61  SSVSVPEEVE--LNEDEDDPTLEMAYLDSETDPESITEWELDFCSRPILDIRGKKVWELV 120

Query: 121 ACDNSLSLQYTKYFPNNVINSITLRDAISSITEELGVPLPEKIRFFRSQMQTIITKACTE 180
            CDNSLSLQYTKYFPNNVINSITLRDAISSI EELGVPLPEKIRFFRSQMQTIITKACTE
Sbjct: 121 VCDNSLSLQYTKYFPNNVINSITLRDAISSIAEELGVPLPEKIRFFRSQMQTIITKACTE 180

Query: 181 LGVKPIPSKRCLSLLLWLEERYETVYTRHPGFQKGSKPLLALDNPFPMELPDNLFGERWA 240
           LG+KPIPSKRCLSLLLWLEERYETVYTRHPGFQKGSKPLLALDNPFPMELP+NLFGERWA
Sbjct: 181 LGIKPIPSKRCLSLLLWLEERYETVYTRHPGFQKGSKPLLALDNPFPMELPENLFGERWA 240

Query: 241 FVQLPFSAVQEEVSNLNASFMFGSSLDLDLLGIEIDDNTMIPGLSVASSRAQPLAAWMNG 300
           FVQLPFSAVQEE+SNL  +FMFGSSLDLDLLGI+IDD TMIPGLSVA+SRAQPLAAWMNG
Sbjct: 241 FVQLPFSAVQEEISNLKETFMFGSSLDLDLLGIDIDDKTMIPGLSVATSRAQPLAAWMNG 300

Query: 301 MEVYSVEADTSRACLILSVGISTRYVYATYKKNPVTTAEAEAWEAAKKACGGLHFLAIQD 360
           MEVYSVEADTSRACLILSVGI+TRYVYATYKK PVTTAEAEAWEAAKKACGGLHFLAIQD
Sbjct: 301 MEVYSVEADTSRACLILSVGIATRYVYATYKKTPVTTAEAEAWEAAKKACGGLHFLAIQD 360

Query: 361 DLDSEDCVGFWLLLDLPPPPV 382
           DLDSEDCVGFWLLLDLPPPPV
Sbjct: 361 DLDSEDCVGFWLLLDLPPPPV 379

BLAST of CmoCh08G005120 vs. NCBI nr
Match: XP_022959769.1 (protein TAB2 homolog, chloroplastic [Cucurbita moschata])

HSP 1 Score: 768.8 bits (1984), Expect = 2.1e-218
Identity = 381/381 (100.00%), Postives = 381/381 (100.00%), Query Frame = 0

Query: 1   MATLSFNPTRIRTPGGLHLCKPKPRSLPFSQSIKTPKRFSADFRINQQLLRRFRSNSVSE 60
           MATLSFNPTRIRTPGGLHLCKPKPRSLPFSQSIKTPKRFSADFRINQQLLRRFRSNSVSE
Sbjct: 1   MATLSFNPTRIRTPGGLHLCKPKPRSLPFSQSIKTPKRFSADFRINQQLLRRFRSNSVSE 60

Query: 61  SSISVPEEVEVAVDEDEDDPTLELAYLDSETDPESITEWELDFCSRPILDIRGKKVWELV 120
           SSISVPEEVEVAVDEDEDDPTLELAYLDSETDPESITEWELDFCSRPILDIRGKKVWELV
Sbjct: 61  SSISVPEEVEVAVDEDEDDPTLELAYLDSETDPESITEWELDFCSRPILDIRGKKVWELV 120

Query: 121 ACDNSLSLQYTKYFPNNVINSITLRDAISSITEELGVPLPEKIRFFRSQMQTIITKACTE 180
           ACDNSLSLQYTKYFPNNVINSITLRDAISSITEELGVPLPEKIRFFRSQMQTIITKACTE
Sbjct: 121 ACDNSLSLQYTKYFPNNVINSITLRDAISSITEELGVPLPEKIRFFRSQMQTIITKACTE 180

Query: 181 LGVKPIPSKRCLSLLLWLEERYETVYTRHPGFQKGSKPLLALDNPFPMELPDNLFGERWA 240
           LGVKPIPSKRCLSLLLWLEERYETVYTRHPGFQKGSKPLLALDNPFPMELPDNLFGERWA
Sbjct: 181 LGVKPIPSKRCLSLLLWLEERYETVYTRHPGFQKGSKPLLALDNPFPMELPDNLFGERWA 240

Query: 241 FVQLPFSAVQEEVSNLNASFMFGSSLDLDLLGIEIDDNTMIPGLSVASSRAQPLAAWMNG 300
           FVQLPFSAVQEEVSNLNASFMFGSSLDLDLLGIEIDDNTMIPGLSVASSRAQPLAAWMNG
Sbjct: 241 FVQLPFSAVQEEVSNLNASFMFGSSLDLDLLGIEIDDNTMIPGLSVASSRAQPLAAWMNG 300

Query: 301 MEVYSVEADTSRACLILSVGISTRYVYATYKKNPVTTAEAEAWEAAKKACGGLHFLAIQD 360
           MEVYSVEADTSRACLILSVGISTRYVYATYKKNPVTTAEAEAWEAAKKACGGLHFLAIQD
Sbjct: 301 MEVYSVEADTSRACLILSVGISTRYVYATYKKNPVTTAEAEAWEAAKKACGGLHFLAIQD 360

Query: 361 DLDSEDCVGFWLLLDLPPPPV 382
           DLDSEDCVGFWLLLDLPPPPV
Sbjct: 361 DLDSEDCVGFWLLLDLPPPPV 381

BLAST of CmoCh08G005120 vs. NCBI nr
Match: KAG6593295.1 (Protein TAB2-like, chloroplastic, partial [Cucurbita argyrosperma subsp. sororia])

HSP 1 Score: 760.4 bits (1962), Expect = 7.6e-216
Identity = 380/387 (98.19%), Postives = 380/387 (98.19%), Query Frame = 0

Query: 1   MATLSFNPTRIRTPGGLHLCKPKPRSLPFSQSIKTPKRFSADFRINQQLLRRFRSNSVSE 60
           MATLSFNPTRIRTPGGLHLCKPKPRSLPF QSIKTPKRFSADFRINQQLLRRFRSNSVSE
Sbjct: 1   MATLSFNPTRIRTPGGLHLCKPKPRSLPFPQSIKTPKRFSADFRINQQLLRRFRSNSVSE 60

Query: 61  SSISVPEEVEVAVDED------EDDPTLELAYLDSETDPESITEWELDFCSRPILDIRGK 120
           SSISVPEEVEVAVDED      EDDPTLELAYLDSETDPESITEWELDFCSRPILDIRGK
Sbjct: 61  SSISVPEEVEVAVDEDEDEDEVEDDPTLELAYLDSETDPESITEWELDFCSRPILDIRGK 120

Query: 121 KVWELVACDNSLSLQYTKYFPNNVINSITLRDAISSITEELGVPLPEKIRFFRSQMQTII 180
           KVWELVACDNSLSLQYTKYFPNNVINSITLRDAISSITEELGVPLPEKIRFFRSQMQTII
Sbjct: 121 KVWELVACDNSLSLQYTKYFPNNVINSITLRDAISSITEELGVPLPEKIRFFRSQMQTII 180

Query: 181 TKACTELGVKPIPSKRCLSLLLWLEERYETVYTRHPGFQKGSKPLLALDNPFPMELPDNL 240
           TKACTELGVKPIPSKRCLSLLLWLEERYETVYTRHPGFQKGSKPLLALDNPFPMELPDNL
Sbjct: 181 TKACTELGVKPIPSKRCLSLLLWLEERYETVYTRHPGFQKGSKPLLALDNPFPMELPDNL 240

Query: 241 FGERWAFVQLPFSAVQEEVSNLNASFMFGSSLDLDLLGIEIDDNTMIPGLSVASSRAQPL 300
           FGERWAFVQLPFSAVQEEVSNLNASFMFGSSLDLDLLGIEIDDNTMIPGLSVASSRAQPL
Sbjct: 241 FGERWAFVQLPFSAVQEEVSNLNASFMFGSSLDLDLLGIEIDDNTMIPGLSVASSRAQPL 300

Query: 301 AAWMNGMEVYSVEADTSRACLILSVGISTRYVYATYKKNPVTTAEAEAWEAAKKACGGLH 360
           AAWMNGMEVYSVEADTSRACLILSVGISTRYVYATYKKNPVTTAEAEAWEAAKKACGGLH
Sbjct: 301 AAWMNGMEVYSVEADTSRACLILSVGISTRYVYATYKKNPVTTAEAEAWEAAKKACGGLH 360

Query: 361 FLAIQDDLDSEDCVGFWLLLDLPPPPV 382
           FLAIQDDLDSEDCVGFWLLLDLPPPPV
Sbjct: 361 FLAIQDDLDSEDCVGFWLLLDLPPPPV 387

BLAST of CmoCh08G005120 vs. NCBI nr
Match: XP_023004564.1 (protein TAB2 homolog, chloroplastic isoform X3 [Cucurbita maxima])

HSP 1 Score: 760.4 bits (1962), Expect = 7.6e-216
Identity = 377/381 (98.95%), Postives = 378/381 (99.21%), Query Frame = 0

Query: 1   MATLSFNPTRIRTPGGLHLCKPKPRSLPFSQSIKTPKRFSADFRINQQLLRRFRSNSVSE 60
           MATLSFNPTRIRTPGGLHLCKPKPRSLPF QSIKT KRFSADFRINQQLL RFRSNSVSE
Sbjct: 1   MATLSFNPTRIRTPGGLHLCKPKPRSLPFPQSIKTAKRFSADFRINQQLLHRFRSNSVSE 60

Query: 61  SSISVPEEVEVAVDEDEDDPTLELAYLDSETDPESITEWELDFCSRPILDIRGKKVWELV 120
           SSISVPEEVEVAVDEDEDDPTLELAYLDSETDPESITEWELDFCSRPILDIRGKKVWELV
Sbjct: 61  SSISVPEEVEVAVDEDEDDPTLELAYLDSETDPESITEWELDFCSRPILDIRGKKVWELV 120

Query: 121 ACDNSLSLQYTKYFPNNVINSITLRDAISSITEELGVPLPEKIRFFRSQMQTIITKACTE 180
           ACDNSLSLQYTKYFPNNVINSITLRDAISSITEELGVPLPEKIRFFRSQMQTIITKACTE
Sbjct: 121 ACDNSLSLQYTKYFPNNVINSITLRDAISSITEELGVPLPEKIRFFRSQMQTIITKACTE 180

Query: 181 LGVKPIPSKRCLSLLLWLEERYETVYTRHPGFQKGSKPLLALDNPFPMELPDNLFGERWA 240
           LGVKPIPSKRCLSLLLWLEERYETVYTRHPGFQKGSKPLLALDNPFPMELPDNLFGERWA
Sbjct: 181 LGVKPIPSKRCLSLLLWLEERYETVYTRHPGFQKGSKPLLALDNPFPMELPDNLFGERWA 240

Query: 241 FVQLPFSAVQEEVSNLNASFMFGSSLDLDLLGIEIDDNTMIPGLSVASSRAQPLAAWMNG 300
           FVQLPFSAVQEEVSNLNASFMFGSSLDLDLLGIEIDDN+MIPGLSVASSRAQPLAAWMNG
Sbjct: 241 FVQLPFSAVQEEVSNLNASFMFGSSLDLDLLGIEIDDNSMIPGLSVASSRAQPLAAWMNG 300

Query: 301 MEVYSVEADTSRACLILSVGISTRYVYATYKKNPVTTAEAEAWEAAKKACGGLHFLAIQD 360
           MEVYSVEADTSRACLILSVGISTRYVYATYKKNPVTTAEAEAWEAAKKACGGLHFLAIQD
Sbjct: 301 MEVYSVEADTSRACLILSVGISTRYVYATYKKNPVTTAEAEAWEAAKKACGGLHFLAIQD 360

Query: 361 DLDSEDCVGFWLLLDLPPPPV 382
           DLDSEDCVGFWLLLDLPPPPV
Sbjct: 361 DLDSEDCVGFWLLLDLPPPPV 381

BLAST of CmoCh08G005120 vs. NCBI nr
Match: XP_023004563.1 (protein TAB2 homolog, chloroplastic isoform X2 [Cucurbita maxima])

HSP 1 Score: 755.4 bits (1949), Expect = 2.4e-214
Identity = 377/383 (98.43%), Postives = 378/383 (98.69%), Query Frame = 0

Query: 1   MATLSFNPTRIRTPGGLHLCKPKPRSLPFSQSIKTPKRFSADFRINQQLLRRFRSNSVSE 60
           MATLSFNPTRIRTPGGLHLCKPKPRSLPF QSIKT KRFSADFRINQQLL RFRSNSVSE
Sbjct: 1   MATLSFNPTRIRTPGGLHLCKPKPRSLPFPQSIKTAKRFSADFRINQQLLHRFRSNSVSE 60

Query: 61  SSISVPEEVEVAVDED--EDDPTLELAYLDSETDPESITEWELDFCSRPILDIRGKKVWE 120
           SSISVPEEVEVAVDED  EDDPTLELAYLDSETDPESITEWELDFCSRPILDIRGKKVWE
Sbjct: 61  SSISVPEEVEVAVDEDEAEDDPTLELAYLDSETDPESITEWELDFCSRPILDIRGKKVWE 120

Query: 121 LVACDNSLSLQYTKYFPNNVINSITLRDAISSITEELGVPLPEKIRFFRSQMQTIITKAC 180
           LVACDNSLSLQYTKYFPNNVINSITLRDAISSITEELGVPLPEKIRFFRSQMQTIITKAC
Sbjct: 121 LVACDNSLSLQYTKYFPNNVINSITLRDAISSITEELGVPLPEKIRFFRSQMQTIITKAC 180

Query: 181 TELGVKPIPSKRCLSLLLWLEERYETVYTRHPGFQKGSKPLLALDNPFPMELPDNLFGER 240
           TELGVKPIPSKRCLSLLLWLEERYETVYTRHPGFQKGSKPLLALDNPFPMELPDNLFGER
Sbjct: 181 TELGVKPIPSKRCLSLLLWLEERYETVYTRHPGFQKGSKPLLALDNPFPMELPDNLFGER 240

Query: 241 WAFVQLPFSAVQEEVSNLNASFMFGSSLDLDLLGIEIDDNTMIPGLSVASSRAQPLAAWM 300
           WAFVQLPFSAVQEEVSNLNASFMFGSSLDLDLLGIEIDDN+MIPGLSVASSRAQPLAAWM
Sbjct: 241 WAFVQLPFSAVQEEVSNLNASFMFGSSLDLDLLGIEIDDNSMIPGLSVASSRAQPLAAWM 300

Query: 301 NGMEVYSVEADTSRACLILSVGISTRYVYATYKKNPVTTAEAEAWEAAKKACGGLHFLAI 360
           NGMEVYSVEADTSRACLILSVGISTRYVYATYKKNPVTTAEAEAWEAAKKACGGLHFLAI
Sbjct: 301 NGMEVYSVEADTSRACLILSVGISTRYVYATYKKNPVTTAEAEAWEAAKKACGGLHFLAI 360

Query: 361 QDDLDSEDCVGFWLLLDLPPPPV 382
           QDDLDSEDCVGFWLLLDLPPPPV
Sbjct: 361 QDDLDSEDCVGFWLLLDLPPPPV 383

BLAST of CmoCh08G005120 vs. NCBI nr
Match: XP_023515235.1 (protein TAB2 homolog, chloroplastic [Cucurbita pepo subsp. pepo])

HSP 1 Score: 754.6 bits (1947), Expect = 4.1e-214
Identity = 377/387 (97.42%), Postives = 379/387 (97.93%), Query Frame = 0

Query: 1   MATLSFNPTRIRTPGGLHLCKPKPRSLPFSQSIKTPKRFSADFRINQQLLRRFRSNSVSE 60
           MATLSFNPTRIRTPGGLHLCKPKPRSLPF QSIKT KRFSADFRINQQLLRRFRSNSVSE
Sbjct: 1   MATLSFNPTRIRTPGGLHLCKPKPRSLPFPQSIKTAKRFSADFRINQQLLRRFRSNSVSE 60

Query: 61  SSISVPEEVEVAVDED------EDDPTLELAYLDSETDPESITEWELDFCSRPILDIRGK 120
           SSISVP+EVEVAVDED      EDDPTLELAYLDSETDPESITEWELDFCSRPILDIRGK
Sbjct: 61  SSISVPDEVEVAVDEDEDEDEAEDDPTLELAYLDSETDPESITEWELDFCSRPILDIRGK 120

Query: 121 KVWELVACDNSLSLQYTKYFPNNVINSITLRDAISSITEELGVPLPEKIRFFRSQMQTII 180
           KVWELVACDNSLSLQYTKYFPNNVINSITLRDAISSITEELGVPLPEKIRFFRSQMQTII
Sbjct: 121 KVWELVACDNSLSLQYTKYFPNNVINSITLRDAISSITEELGVPLPEKIRFFRSQMQTII 180

Query: 181 TKACTELGVKPIPSKRCLSLLLWLEERYETVYTRHPGFQKGSKPLLALDNPFPMELPDNL 240
           TKACTELGVKPIPSKRCLSLLLWLEERYETVYTRHPGFQKGSKPLLALDNPFPMELPDNL
Sbjct: 181 TKACTELGVKPIPSKRCLSLLLWLEERYETVYTRHPGFQKGSKPLLALDNPFPMELPDNL 240

Query: 241 FGERWAFVQLPFSAVQEEVSNLNASFMFGSSLDLDLLGIEIDDNTMIPGLSVASSRAQPL 300
           FGERWAFVQLPFSAVQEEVSNLNASFMFGSSLDLDLLGIEIDDNTMIPGLSVASSRAQPL
Sbjct: 241 FGERWAFVQLPFSAVQEEVSNLNASFMFGSSLDLDLLGIEIDDNTMIPGLSVASSRAQPL 300

Query: 301 AAWMNGMEVYSVEADTSRACLILSVGISTRYVYATYKKNPVTTAEAEAWEAAKKACGGLH 360
           AAW+NGMEVYSVEADTSRACLILSVGISTRYVYATYKKNPVTTAEAEAWEAAKKACGGLH
Sbjct: 301 AAWINGMEVYSVEADTSRACLILSVGISTRYVYATYKKNPVTTAEAEAWEAAKKACGGLH 360

Query: 361 FLAIQDDLDSEDCVGFWLLLDLPPPPV 382
           FLAIQDDLDSEDCVGFWLLLDLPPPPV
Sbjct: 361 FLAIQDDLDSEDCVGFWLLLDLPPPPV 387

BLAST of CmoCh08G005120 vs. TAIR 10
Match: AT3G08010.1 (RNA binding )

HSP 1 Score: 565.5 bits (1456), Expect = 3.3e-161
Identity = 278/381 (72.97%), Postives = 327/381 (85.83%), Query Frame = 0

Query: 1   MATLSFNPTRIRTPGGLHLCKPKPRSLPFSQSIKTPKRFSADFRINQQLLRRFRSNSVSE 60
           MATL FN  RI+TP    +  PKP S  F++ IKT   FS++  + +    RF S S+ E
Sbjct: 1   MATLGFNTRRIQTPSLPRI--PKPSS--FTKPIKTHHLFSSETLLKR---CRFVSRSLPE 60

Query: 61  SSISVPEEVEVAVDEDEDDPTLELAYLDSETDPESITEWELDFCSRPILDIRGKKVWELV 120
           SS+S+ +E EVA + +EDDPT EL+YLD E+D +SI EWELDFCSRPILD RGKK+WELV
Sbjct: 61  SSLSITKEQEVANEVEEDDPTSELSYLDPESDADSIKEWELDFCSRPILDSRGKKIWELV 120

Query: 121 ACDNSLSLQYTKYFPNNVINSITLRDAISSITEELGVPLPEKIRFFRSQMQTIITKACTE 180
            CD SLSLQ TKYFPNNVINSITL+DAI +IT++LGVPLPEKIRFFRSQMQTIITKAC E
Sbjct: 121 VCDASLSLQVTKYFPNNVINSITLKDAIVTITQDLGVPLPEKIRFFRSQMQTIITKACKE 180

Query: 181 LGVKPIPSKRCLSLLLWLEERYETVYTRHPGFQKGSKPLLALDNPFPMELPDNLFGERWA 240
           L +K +PSKRCLSL LWL+ERY+TVYTRHPGFQKGS PLL+LDNPFPM LP+NLFGE+WA
Sbjct: 181 LAIKAVPSKRCLSLFLWLQERYDTVYTRHPGFQKGSLPLLSLDNPFPMNLPENLFGEKWA 240

Query: 241 FVQLPFSAVQEEVSNLNASFMFGSSLDLDLLGIEIDDNTMIPGLSVASSRAQPLAAWMNG 300
           FVQLP+SAV+EE+S+ +  F+FG+SLDLDLLGIE+D+NT+IPGLSVA+SRA+PLAAWMNG
Sbjct: 241 FVQLPYSAVREEISDFDEKFVFGASLDLDLLGIEVDENTLIPGLSVATSRAKPLAAWMNG 300

Query: 301 MEVYSVEADTSRACLILSVGISTRYVYATYKKNPVTTAEAEAWEAAKKACGGLHFLAIQD 360
           +EV S+EAD+S+ CLILSVGI+TRYVYATYKK PVTT EAEAWE+AKK  GGLHFLAIQD
Sbjct: 301 LEVCSIEADSSKGCLILSVGIATRYVYATYKKTPVTTDEAEAWESAKKTSGGLHFLAIQD 360

Query: 361 DLDSEDCVGFWLLLDLPPPPV 382
           DLDS+DCVGFWLL+DLPPPPV
Sbjct: 361 DLDSDDCVGFWLLIDLPPPPV 374

The following BLAST results are available for this feature:
Match NameE-valueIdentityDescription
Q9SFB34.7e-16072.97Protein TAB2 homolog, chloroplastic OS=Arabidopsis thaliana OX=3702 GN=ATAB2 PE=... [more]
B4FTR73.3e-13765.07Protein TAB2 homolog, chloroplastic OS=Zea mays OX=4577 GN=TAB2 PE=2 SV=1[more]
Q6K9C11.8e-13569.00Protein TAB2 homolog, chloroplastic OS=Oryza sativa subsp. japonica OX=39947 GN=... [more]
Match NameE-valueIdentityDescription
A0A6J1H9211.0e-218100.00protein TAB2 homolog, chloroplastic OS=Cucurbita moschata OX=3662 GN=LOC11146074... [more]
A0A6J1KWL73.7e-21698.95protein TAB2 homolog, chloroplastic isoform X3 OS=Cucurbita maxima OX=3661 GN=LO... [more]
A0A6J1KZX31.2e-21498.43protein TAB2 homolog, chloroplastic isoform X2 OS=Cucurbita maxima OX=3661 GN=LO... [more]
A0A6J1KQS12.9e-21395.44protein TAB2 homolog, chloroplastic isoform X1 OS=Cucurbita maxima OX=3661 GN=LO... [more]
A0A5A7UYM57.7e-19891.34DUF1092 domain-containing protein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C2... [more]
Match NameE-valueIdentityDescription
XP_022959769.12.1e-218100.00protein TAB2 homolog, chloroplastic [Cucurbita moschata][more]
KAG6593295.17.6e-21698.19Protein TAB2-like, chloroplastic, partial [Cucurbita argyrosperma subsp. sororia... [more]
XP_023004564.17.6e-21698.95protein TAB2 homolog, chloroplastic isoform X3 [Cucurbita maxima][more]
XP_023004563.12.4e-21498.43protein TAB2 homolog, chloroplastic isoform X2 [Cucurbita maxima][more]
XP_023515235.14.1e-21497.42protein TAB2 homolog, chloroplastic [Cucurbita pepo subsp. pepo][more]
Match NameE-valueIdentityDescription
AT3G08010.13.3e-16172.97RNA binding [more]
InterPro
Analysis Name: InterPro Annotations of Cucurbita moschata (Rifu) v1
Date Performed: 2021-10-25
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR009472Tab2-likePFAMPF06485Tab2_likecoord: 99..373
e-value: 9.5E-90
score: 300.7
IPR009472Tab2-likePANTHERPTHR34556FAMILY NOT NAMEDcoord: 1..381

Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
CmoCh08G005120.1CmoCh08G005120.1mRNA


GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
molecular_function GO:0003723 RNA binding