CmoCh08G004630 (gene) Cucurbita moschata (Rifu) v1
Overview
Sequences
The following sequences are available for this feature:
Legend: exonfive_prime_UTRpolypeptideCDSthree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below.TCGCGACCTGTAAGAAATCTCAGGTACTTTTTGCAATTCTTCACGCTCGAATCCGTAAGGCTTCATTGAAGTCATCCCCACAGTTTGTTGCCTAATTCGACATCTGGTTTGGCGGGAAAATCTCGTTGTTTGGGCTTTAGTTTTGATAACTGGACGATTTAACTTGATCTATTGATTGTGTTAGCATCTTGAGAGGTCATGAATCATTTACTTCTATGGTTTGATTGTTCGATCGTAATTCAGAAGTTGTTTGTAGATTTCAGTTTATTATTGGTAGATACTTCAGAATTGCTGGTGTTTAGATGAGAGATGTGTTTTTTTTTATAATTTATTATATATATATATATAGTAATAATTGCATGAGTTTCTTGATTTACTTTTTTCATATACTCGTGAATAGTGTGTTTCTTGGTTCTGAACAATCCTGTATGTTAAAAAAACAACTGCCACCTACCTTCATATGCTCGTTGATGGCGCTGCATGCATTTCCAACTTCGGGATCGGTTGAATTTTGTTAAATGGAACAATATTACTGATTCTGTAAATTTGGAACTGGAAGGACTTGTATCAACTATGAAGTACCAGGGCCTTATATTCTTCTTTATGAATTCCTGCAGTGGAACTGTCTCTAGGTCGAAACTGAAGTTTCGAATCAATGGCAAGGATCAAGCCACAAACTTTGCTTCAACAAAGCAAAAAGAAGAAAGGGCCTTCGCGGATTAGTCTTACCACAATTGTCACATGCAGCTTGATTATCGCTTTGTTTGTGTTTTTCCTGCATACCACATATAGGCATTGGTCTCATAGGTTAGTAACAGCGTTGTTATGTTCCTGGAGTTCGTATTCTCATTAAATTTATGAGAGTTTCAATACTTTTACTTTATTGATTAGAATGTTTAATGTTGGTTGAGACTTGAATACAGATCAACATTTTTTGGTATGTTAATGTGGAATGAGGCTGCGAGAGATATCTTTTACTGACTTAACTTTTCTCCCGTATCCAATTCAGGTCCAATTTACAATCAGAGAATGTTTATTCAGGTTCTGAGGTACATAGGTCAATTTTGATTCTTATTTTAGAATGACTTTGATGATTCCTACATTATTCTGTTAGCATATTCATTTCTCTTCTTCATTTCTAACGTTCTAACTGATAATTGTTGATATATTTGCACATCTTAGTGCAAGTTTATCTTCATAACATAAGGTTTTCATCACACTTGAAGAGCATGGCACTATTTCATGATTTATCTCCCCTTTCTAAGTCTTCTCATACTTTGCAGACTGAAAATGCTGTGTTCGATGCGAAAAAAACAGATCTACCTGGATATGCTGTAGGTTTTCCCATTCCTGTCCCTGTCTGCCTTATGAATGTTTAGTTTTTATCTAAAAAAAGAAAAAAAAAATCCCTTCTATTGCTGTATGAACTCGTGAATGATAATAATTCTCATGTTTTCTCGCTGTTAATAGGCTTTCAGTACTTCAAAGGGCTCAATTGTTGTGGAGCTTTACAAAGAAAGTGCCCCTGAAGTTGTTGATGAATTTATTGATTTATGGTGAGCATTATAAATACGTAATATTCCATTGTCTATACTGTGGAGGGTCTGCATTTCATTTTCTTAATAGTAATTGGAGGATGACATGTCAAATTGAATGTTGCCAATTTAACACCCCCTTCCAGACTCGAAGTTCCAAAAGGGGTTGTATTTTTCATTTTACTCTTGCATGACATAATGTTCACTCAAAACTATAATTTTGATAATCTCCCATCTTTTCTTTTTCTTTTTTCTAATTATATTACCATGTCCCTTGGCATTAAACATTCGCCTTTGAAATATTGGTTTTTCAGTCAAAAGCATCATTTCAATGAAATGCTGTTTCAACATGTGGTGAAACATTATTCAATTCAAGCGGGCAACAACCAAGATCTTGGGGTTGCAGAAGATTGGATTCTGGGAGGAAAACATCACAGTCAACCTGATGCAAGGTTGTTGTCTTTTAATTCATTGTTGATGGTTGCTATTGTACAGTTTTTCAATTTCAAATTATCTGATAGTTAGCATTTTTTATGGTCAATCAGTTTGAAACATGATGCCTTTTTAGTTGGGACTCCAAGGGGGAAATCTAAGAACAAAGGATTTGAGATTTTCATTACAACTGCACCAATTCCAGATCTTAGTGAGAAGCTGATCGTCTTTGGGCGAGTAATCCAGGGAGAACACGTTGTACAGGTGATAACTTTGCTTTCTGTTGTTTGTTGTGAGTACTTCTGACGTTTCCACTTCTTATTGAGTTTATTGACAGAGAAATTTCAATTTCAAATTTCAGACCTAACTGAACCCTTCTGCTAGAACGTTCTTTACATGAGATCTTCTAACAGACCTATGAATTATCCATCACGCGATTCCAAATTAAGTGGTTTCCTGTTTCATTTTAGTTGGTTGTCCTTGATTAGCTAGCCATTTCTGCAAGATCATCTGTTGACCATCATCACATTATATTGATGTTCGTCAAGCATTTTTATTTCTCAGGAGATTGAAGAGGTGGACACCGATGAGCATTTTCGACCCAAATCTACAATTAAAATAAACAACATTGCCCTGAGAATGAAAATATGAAAGGCTGCCTTGCACATCGGAGTGCCTTTGGCATATTGGGCTCCTACCTTTCAAGTGAGTGTTTTCCTCTTCTCCTAACCTCCATATCAGTTCGTAGGGATAATTTTCCTGATGAGACATGACTCGGAATTTTCATTCAAGTATTCGTTCGGCCACGTTACTGCAGTGTTAGCCTTTGGTGGCTGGGCTAGGAGAGGAGCTTTTCAAATTCCTTCATCTTTGTGTAATATGCTTTATTTGGGGACGTGATTTGGTAGTGTCACTTGTTTTATAAACTTTGAAATGTTATACGGCAGGTGATTGGATTTTTGAGTGGCCATCAGACTTCATCATGGAGATTCTTTTCACTTCTCTTTGGTGGTAGGCGTTAGTACATCAGATTGGCGAATGGATATCAATTTGATATAACAAAATTTTCGTATATTCATTATTGGAGTTTGTTGTGATCGATGCCCATTACATGAAAACTATATTATCT TCGCGACCTGTAAGAAATCTCAGGTACTTTTTGCAATTCTTCACGCTCGAATCCGTAAGGCTTCATTGAAGTCATCCCCACAGTTTGTTGCCTAATTCGACATCTGGTTTGGCGGGAAAATCTCGTTGTTTGGGCTTTAGTTTTGATAACTGGACGATTTAACTTGATCTATTGATTGTGTTAGCATCTTGAGAGTGGAACTGTCTCTAGGTCGAAACTGAAGTTTCGAATCAATGGCAAGGATCAAGCCACAAACTTTGCTTCAACAAAGCAAAAAGAAGAAAGGGCCTTCGCGGATTAGTCTTACCACAATTGTCACATGCAGCTTGATTATCGCTTTGTTTGTGTTTTTCCTGCATACCACATATAGGCATTGGTCTCATAGGTCCAATTTACAATCAGAGAATGTTTATTCAGGTTCTGAGACTGAAAATGCTGTGTTCGATGCGAAAAAAACAGATCTACCTGGATATGCTGCTTTCAGTACTTCAAAGGGCTCAATTGTTGTGGAGCTTTACAAAGAAAGTGCCCCTGAAGTTGTTGATGAATTTATTGATTTATGTCAAAAGCATCATTTCAATGAAATGCTGTTTCAACATGTGGTGAAACATTATTCAATTCAAGCGGGCAACAACCAAGATCTTGGGGTTGCAGAAGATTGGATTCTGGGAGGAAAACATCACAGTCAACCTGATGCAAGTTTGAAACATGATGCCTTTTTAGTTGGGACTCCAAGGGGGAAATCTAAGAACAAAGGATTTGAGATTTTCATTACAACTGCACCAATTCCAGATCTTAGTGAGAAGCTGATCGTCTTTGGGCGAGTAATCCAGGGAGAACACGTTGTACAGGTGATTGGATTTTTGAGTGGCCATCAGACTTCATCATGGAGATTCTTTTCACTTCTCTTTGGTGGTAGGCGTTAGTACATCAGATTGGCGAATGGATATCAATTTGATATAACAAAATTTTCGTATATTCATTATTGGAGTTTGTTGTGATCGATGCCCATTACATGAAAACTATATTATCT ATGGCAAGGATCAAGCCACAAACTTTGCTTCAACAAAGCAAAAAGAAGAAAGGGCCTTCGCGGATTAGTCTTACCACAATTGTCACATGCAGCTTGATTATCGCTTTGTTTGTGTTTTTCCTGCATACCACATATAGGCATTGGTCTCATAGGTCCAATTTACAATCAGAGAATGTTTATTCAGGTTCTGAGACTGAAAATGCTGTGTTCGATGCGAAAAAAACAGATCTACCTGGATATGCTGCTTTCAGTACTTCAAAGGGCTCAATTGTTGTGGAGCTTTACAAAGAAAGTGCCCCTGAAGTTGTTGATGAATTTATTGATTTATGTCAAAAGCATCATTTCAATGAAATGCTGTTTCAACATGTGGTGAAACATTATTCAATTCAAGCGGGCAACAACCAAGATCTTGGGGTTGCAGAAGATTGGATTCTGGGAGGAAAACATCACAGTCAACCTGATGCAAGTTTGAAACATGATGCCTTTTTAGTTGGGACTCCAAGGGGGAAATCTAAGAACAAAGGATTTGAGATTTTCATTACAACTGCACCAATTCCAGATCTTAGTGAGAAGCTGATCGTCTTTGGGCGAGTAATCCAGGGAGAACACGTTGTACAGGTGATTGGATTTTTGAGTGGCCATCAGACTTCATCATGGAGATTCTTTTCACTTCTCTTTGGTGGTAGGCGTTAG MARIKPQTLLQQSKKKKGPSRISLTTIVTCSLIIALFVFFLHTTYRHWSHRSNLQSENVYSGSETENAVFDAKKTDLPGYAAFSTSKGSIVVELYKESAPEVVDEFIDLCQKHHFNEMLFQHVVKHYSIQAGNNQDLGVAEDWILGGKHHSQPDASLKHDAFLVGTPRGKSKNKGFEIFITTAPIPDLSEKLIVFGRVIQGEHVVQVIGFLSGHQTSSWRFFSLLFGGRR Homology
BLAST of CmoCh08G004630 vs. ExPASy Swiss-Prot
Match: Q9C835 (Peptidyl-prolyl cis-trans isomerase CYP21-4 OS=Arabidopsis thaliana OX=3702 GN=CYP21-4 PE=2 SV=1) HSP 1 Score: 226.1 bits (575), Expect = 4.1e-58 Identity = 114/210 (54.29%), Postives = 148/210 (70.48%), Query Frame = 0
BLAST of CmoCh08G004630 vs. ExPASy Swiss-Prot
Match: Q94A16 (Peptidyl-prolyl cis-trans isomerase CYP21-3, mitochondrial OS=Arabidopsis thaliana OX=3702 GN=CYP21-3 PE=2 SV=2) HSP 1 Score: 204.9 bits (520), Expect = 9.7e-52 Identity = 108/209 (51.67%), Postives = 141/209 (67.46%), Query Frame = 0
BLAST of CmoCh08G004630 vs. ExPASy Swiss-Prot
Match: Q8X191 (Peptidyl-prolyl cis-trans isomerase-like 1 OS=Aspergillus niger OX=5061 GN=cypC PE=3 SV=1) HSP 1 Score: 82.4 bits (202), Expect = 7.3e-15 Identity = 45/131 (34.35%), Postives = 67/131 (51.15%), Query Frame = 0
BLAST of CmoCh08G004630 vs. ExPASy Swiss-Prot
Match: Q2U6U0 (Peptidyl-prolyl cis-trans isomerase-like 1 OS=Aspergillus oryzae (strain ATCC 42149 / RIB 40) OX=510516 GN=cyp1 PE=3 SV=1) HSP 1 Score: 81.3 bits (199), Expect = 1.6e-14 Identity = 44/131 (33.59%), Postives = 65/131 (49.62%), Query Frame = 0
BLAST of CmoCh08G004630 vs. ExPASy Swiss-Prot
Match: Q9SIH1 (Peptidyl-prolyl cis-trans isomerase CYP18-2 OS=Arabidopsis thaliana OX=3702 GN=CYP18-2 PE=2 SV=1) HSP 1 Score: 77.0 bits (188), Expect = 3.0e-13 Identity = 42/146 (28.77%), Postives = 70/146 (47.95%), Query Frame = 0
BLAST of CmoCh08G004630 vs. ExPASy TrEMBL
Match: A0A6J1H6K3 (Peptidyl-prolyl cis-trans isomerase OS=Cucurbita moschata OX=3662 GN=LOC111460669 PE=3 SV=1) HSP 1 Score: 415.2 bits (1066), Expect = 1.7e-112 Identity = 207/208 (99.52%), Postives = 207/208 (99.52%), Query Frame = 0
BLAST of CmoCh08G004630 vs. ExPASy TrEMBL
Match: A0A6J1KR00 (Peptidyl-prolyl cis-trans isomerase OS=Cucurbita maxima OX=3661 GN=LOC111497874 PE=3 SV=1) HSP 1 Score: 405.6 bits (1041), Expect = 1.4e-109 Identity = 201/208 (96.63%), Postives = 204/208 (98.08%), Query Frame = 0
BLAST of CmoCh08G004630 vs. ExPASy TrEMBL
Match: A0A6J1DFX5 (Peptidyl-prolyl cis-trans isomerase OS=Momordica charantia OX=3673 GN=LOC111020696 PE=3 SV=1) HSP 1 Score: 371.7 bits (953), Expect = 2.2e-99 Identity = 183/208 (87.98%), Postives = 195/208 (93.75%), Query Frame = 0
BLAST of CmoCh08G004630 vs. ExPASy TrEMBL
Match: A0A5A7TTE2 (Peptidyl-prolyl cis-trans isomerase OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold411G001780 PE=3 SV=1) HSP 1 Score: 365.5 bits (937), Expect = 1.6e-97 Identity = 178/208 (85.58%), Postives = 195/208 (93.75%), Query Frame = 0
BLAST of CmoCh08G004630 vs. ExPASy TrEMBL
Match: A0A1S3BRL5 (Peptidyl-prolyl cis-trans isomerase OS=Cucumis melo OX=3656 GN=LOC103492750 PE=3 SV=1) HSP 1 Score: 365.5 bits (937), Expect = 1.6e-97 Identity = 178/208 (85.58%), Postives = 195/208 (93.75%), Query Frame = 0
BLAST of CmoCh08G004630 vs. NCBI nr
Match: KAG6593246.1 (Peptidyl-prolyl cis-trans isomerase CYP21-4, partial [Cucurbita argyrosperma subsp. sororia]) HSP 1 Score: 446.8 bits (1148), Expect = 1.1e-121 Identity = 228/252 (90.48%), Postives = 230/252 (91.27%), Query Frame = 0
BLAST of CmoCh08G004630 vs. NCBI nr
Match: XP_022959653.1 (peptidyl-prolyl cis-trans isomerase CYP21-4-like [Cucurbita moschata] >XP_022959655.1 peptidyl-prolyl cis-trans isomerase CYP21-4-like [Cucurbita moschata]) HSP 1 Score: 415.2 bits (1066), Expect = 3.6e-112 Identity = 207/208 (99.52%), Postives = 207/208 (99.52%), Query Frame = 0
BLAST of CmoCh08G004630 vs. NCBI nr
Match: XP_023514968.1 (peptidyl-prolyl cis-trans isomerase CYP21-4 [Cucurbita pepo subsp. pepo]) HSP 1 Score: 409.1 bits (1050), Expect = 2.6e-110 Identity = 203/208 (97.60%), Postives = 205/208 (98.56%), Query Frame = 0
BLAST of CmoCh08G004630 vs. NCBI nr
Match: XP_023004642.1 (peptidyl-prolyl cis-trans isomerase CYP21-4-like [Cucurbita maxima] >XP_023004643.1 peptidyl-prolyl cis-trans isomerase CYP21-4-like [Cucurbita maxima]) HSP 1 Score: 405.6 bits (1041), Expect = 2.9e-109 Identity = 201/208 (96.63%), Postives = 204/208 (98.08%), Query Frame = 0
BLAST of CmoCh08G004630 vs. NCBI nr
Match: KAG7025596.1 (Peptidyl-prolyl cis-trans isomerase CYP21-4 [Cucurbita argyrosperma subsp. argyrosperma]) HSP 1 Score: 380.6 bits (976), Expect = 9.8e-102 Identity = 194/208 (93.27%), Postives = 196/208 (94.23%), Query Frame = 0
BLAST of CmoCh08G004630 vs. TAIR 10
Match: AT3G66654.1 (Cyclophilin-like peptidyl-prolyl cis-trans isomerase family protein ) HSP 1 Score: 226.1 bits (575), Expect = 2.9e-59 Identity = 114/210 (54.29%), Postives = 148/210 (70.48%), Query Frame = 0
BLAST of CmoCh08G004630 vs. TAIR 10
Match: AT3G66654.3 (Cyclophilin-like peptidyl-prolyl cis-trans isomerase family protein ) HSP 1 Score: 226.1 bits (575), Expect = 2.9e-59 Identity = 114/210 (54.29%), Postives = 148/210 (70.48%), Query Frame = 0
BLAST of CmoCh08G004630 vs. TAIR 10
Match: AT3G66654.2 (Cyclophilin-like peptidyl-prolyl cis-trans isomerase family protein ) HSP 1 Score: 226.1 bits (575), Expect = 2.9e-59 Identity = 114/210 (54.29%), Postives = 148/210 (70.48%), Query Frame = 0
BLAST of CmoCh08G004630 vs. TAIR 10
Match: AT2G47320.1 (Cyclophilin-like peptidyl-prolyl cis-trans isomerase family protein ) HSP 1 Score: 204.9 bits (520), Expect = 6.9e-53 Identity = 108/209 (51.67%), Postives = 141/209 (67.46%), Query Frame = 0
BLAST of CmoCh08G004630 vs. TAIR 10
Match: AT2G36130.1 (Cyclophilin-like peptidyl-prolyl cis-trans isomerase family protein ) HSP 1 Score: 77.0 bits (188), Expect = 2.2e-14 Identity = 42/146 (28.77%), Postives = 70/146 (47.95%), Query Frame = 0
The following BLAST results are available for this feature:
InterPro
Analysis Name: InterPro Annotations of Cucurbita moschata (Rifu) v1
Date Performed: 2021-10-25
Relationships
The following mRNA feature(s) are a part of this gene:
GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
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