CmoCh08G004050 (gene) Cucurbita moschata (Rifu) v1

Overview


Name	CmoCh08G004050
Type	gene
Organism	Cucurbita moschata (Cucurbita moschata (Rifu) v1)
Description	desiccation-related protein PCC13-62-like
Location	Cmo_Chr08: 2508946 .. 2510053 (+)
RNA-Seq Expression	CmoCh08G004050
Synteny	CmoCh08G004050

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDSpolypeptide

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGTTCTTGTGGGGTGCCCTTGGGAGAGGGATGGACTCCATTGATCCAACTTTAGCACGTGGAGGGCCACCCCCTATTGGTGCTCAAAGGGCCAACTTAGACCCTATGGTTCGTAATATCATTGAGGAATTTGGATATGAAGAAATTGGACAATTAAAGTTAAGAGTTTTATTTTATTTTATTTTATTTTATTTATTTTTAATCAATATTGTTCTTATTGTTCTTCATTTCTGGATGATTTCAGAACTCTTATTCAGGTATCTGGTGGATTAGGTATTCAAAGGCCATTGTTGAATCTAAGCAAAGATGTATTTTCGGATCTATTTGACAAAGCTGCTGGTCGTCGACTCAGCCCTCCATTCGATCCTTATGTCGATACCATCCATTTTCTCCTCGCCGTTAACCTTTTCCCGTATCTCGGATACACTGGTCTTGTTGAAGCAGCCCCAGTGCTCCTCTTTCTCGAATCTCGTAGGGTAGTATTTGAAAAAGTACTGTCAGTTTTAGATAGAAACCGTTAAAATTTTGTTTTAAAAATGCTCTTGAATGTATAAAATTCCTTCGAACTTTTTTAAAAAGTTAAAAAGTACTATTGTTGTTAATATATGAATGAAACCGTTAGTTCTACGTTTCGAAAATAATATTAGAACTTTTAGAAAAAAGTTTAAAAGGATTTTACGGTATTATTAAAAAAATTTAAAGTTTATGAGTAATTTTGATGCAGCTAGCAGCTAAGCTGTTGAGTGCCGAGTCAGGGCAGAATGCTGTTATGCGAACGCTGCTGTACGAGAGGGCGAACGAGACTGTGGAGCCATATAATATGACTGTGGCTGAATTCACTAACCTGATCTCGACGCTGGCGAACCAGCTTGGTAAATGTGGGCTCAAAGACGAAGGGGTGGTGGTGCCTCGATCGCTCGGGGCAGAGAATCGAACGGAGACCAACGTCCTCGCCACCGACGCTAAATCTCTTTCGTATAACCGCACAATACAAGAGATCTTGCGGATACTATATGGAACTGGTAGCGAACGATTGCCAGGTGCTTTCTTTCCCAATGGTGCTAATGGGTCGATTGCAAGACGCTTCCTCCGTGGAGGCATCATATAA

mRNA sequence

ATGTTCTTGTGGGGTGCCCTTGGGAGAGGGATGGACTCCATTGATCCAACTTTAGCACGTGGAGGGCCACCCCCTATTGGTGCTCAAAGGGCCAACTTAGACCCTATGGTATCTGGTGGATTAGGTATTCAAAGGCCATTGTTGAATCTAAGCAAAGATGTATTTTCGGATCTATTTGACAAAGCTGCTGGTCGTCGACTCAGCCCTCCATTCGATCCTTATGTCGATACCATCCATTTTCTCCTCGCCGTTAACCTTTTCCCGTATCTCGGATACACTGGTCTTGTTGAAGCAGCCCCAGTGCTCCTCTTTCTCGAATCTCGTAGGGTAGTATTTGAAAAACTAGCAGCTAAGCTGTTGAGTGCCGAGTCAGGGCAGAATGCTGTTATGCGAACGCTGCTGTACGAGAGGGCGAACGAGACTGTGGAGCCATATAATATGACTGTGGCTGAATTCACTAACCTGATCTCGACGCTGGCGAACCAGCTTGGTAAATGTGGGCTCAAAGACGAAGGGGTGGTGGTGCCTCGATCGCTCGGGGCAGAGAATCGAACGGAGACCAACGTCCTCGCCACCGACGCTAAATCTCTTTCGTATAACCGCACAATACAAGAGATCTTGCGGATACTATATGGAACTGGTAGCGAACGATTGCCAGGTGCTTTCTTTCCCAATGGTGCTAATGGGTCGATTGCAAGACGCTTCCTCCGTGGAGGCATCATATAA

Coding sequence (CDS)

ATGTTCTTGTGGGGTGCCCTTGGGAGAGGGATGGACTCCATTGATCCAACTTTAGCACGTGGAGGGCCACCCCCTATTGGTGCTCAAAGGGCCAACTTAGACCCTATGGTATCTGGTGGATTAGGTATTCAAAGGCCATTGTTGAATCTAAGCAAAGATGTATTTTCGGATCTATTTGACAAAGCTGCTGGTCGTCGACTCAGCCCTCCATTCGATCCTTATGTCGATACCATCCATTTTCTCCTCGCCGTTAACCTTTTCCCGTATCTCGGATACACTGGTCTTGTTGAAGCAGCCCCAGTGCTCCTCTTTCTCGAATCTCGTAGGGTAGTATTTGAAAAACTAGCAGCTAAGCTGTTGAGTGCCGAGTCAGGGCAGAATGCTGTTATGCGAACGCTGCTGTACGAGAGGGCGAACGAGACTGTGGAGCCATATAATATGACTGTGGCTGAATTCACTAACCTGATCTCGACGCTGGCGAACCAGCTTGGTAAATGTGGGCTCAAAGACGAAGGGGTGGTGGTGCCTCGATCGCTCGGGGCAGAGAATCGAACGGAGACCAACGTCCTCGCCACCGACGCTAAATCTCTTTCGTATAACCGCACAATACAAGAGATCTTGCGGATACTATATGGAACTGGTAGCGAACGATTGCCAGGTGCTTTCTTTCCCAATGGTGCTAATGGGTCGATTGCAAGACGCTTCCTCCGTGGAGGCATCATATAA

Protein sequence

MFLWGALGRGMDSIDPTLARGGPPPIGAQRANLDPMVSGGLGIQRPLLNLSKDVFSDLFDKAAGRRLSPPFDPYVDTIHFLLAVNLFPYLGYTGLVEAAPVLLFLESRRVVFEKLAAKLLSAESGQNAVMRTLLYERANETVEPYNMTVAEFTNLISTLANQLGKCGLKDEGVVVPRSLGAENRTETNVLATDAKSLSYNRTIQEILRILYGTGSERLPGAFFPNGANGSIARRFLRGGII

Homology

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BLAST of CmoCh08G004050 vs. ExPASy Swiss-Prot
Match: P22242 (Desiccation-related protein PCC13-62 OS=Craterostigma plantagineum OX=4153 PE=2 SV=1)

HSP 1 Score: 196.8 bits (499), Expect = 2.8e-49
Identity = 110/247 (44.53%), Postives = 141/247 (57.09%), Query Frame = 0


Query: 2   FLWGALGRGMDSIDPTLARGGPPPIGAQRANLDPMV-------------------SGGLG 61
           F W A G+G+D ++P LA+GGP PIG Q+ANL P +                   S   G
Sbjct: 57  FAWAAFGKGIDELEPELAKGGPSPIGVQKANLSPFIRDIIAQFAYQEFGHVRAIQSSVEG 116

Query: 62  IQRPLLNLSKDVFSDLFDKAAGRRLSPPFDPYVDTIHFLLAVNLFPYLGYTGLVEAAPVL 121
             RPLL+LS   F+ + D A G+ L PPFDPY + I++LLA  + PY+G TG V A P L
Sbjct: 117 FPRPLLDLSAKSFATVMDSAFGKTLKPPFDPYANDINYLLACYVVPYVGLTGYVGANPKL 176

Query: 122 LFLESRRVVFEKLAAKLLSAESGQNAVMRTLLYERANETVEPYNMTVAEFTNLISTLANQ 181
                   V  KL A LL+ E+GQ+A++R LLYERA + VEPY +TVAEFTN IS L N+
Sbjct: 177 -----ESPVSRKLVAGLLAVEAGQDAIIRALLYERATDKVEPYGITVAEFTNKISELRNK 236

Query: 182 LGKCGLKDEGVVVPRSLGAENRTETNVLATDAKSLSYNRTIQEILRILYGTGSERLPGAF 230
           LG  G+KD G++V   LGAE +   NVLA D  SL++ RT +  L           P AF
Sbjct: 237 LGDKGVKDLGLIVEPELGAEGKISGNVLAGDKNSLAFPRTPERCLGSCTAAAMRPSPAAF 296

[Close]

BLAST of CmoCh08G004050 vs. ExPASy TrEMBL
Match: A0A6J1H6Z4 (desiccation-related protein PCC13-62-like OS=Cucurbita moschata OX=3662 GN=LOC111461010 PE=4 SV=1)

HSP 1 Score: 448.7 bits (1153), Expect = 1.5e-122
Identity = 236/262 (90.08%), Postives = 236/262 (90.08%), Query Frame = 0


Query: 1   MFLWGALGRGMDSIDPTLARGGPPPIGAQRANLDPM---------------------VSG 60
           MFLWGALGRGMDSIDPTLARGGPPPIGAQRANLDPM                     VSG
Sbjct: 56  MFLWGALGRGMDSIDPTLARGGPPPIGAQRANLDPMVRNIIEEFGYEEIGQLKTLIQVSG 115

Query: 61  GLGIQRPLLNLSKDVFSDLFDKAAGRRLSPPFDPYVDTIHFLLAVNLFPYLGYTGLVEAA 120
           GLGIQRPLLNLSKDVFSDLFDKAAGRRLSPPFDPYVDTIHFLLAVNLFPYLGYTGLVEAA
Sbjct: 116 GLGIQRPLLNLSKDVFSDLFDKAAGRRLSPPFDPYVDTIHFLLAVNLFPYLGYTGLVEAA 175

Query: 121 PVLLFLESRRVVFEKLAAKLLSAESGQNAVMRTLLYERANETVEPYNMTVAEFTNLISTL 180
           PVLLFLESRR     LAAKLLSAESGQNAVMRTLLYERANETVEPYNMTVAEFTNLISTL
Sbjct: 176 PVLLFLESRR-----LAAKLLSAESGQNAVMRTLLYERANETVEPYNMTVAEFTNLISTL 235

Query: 181 ANQLGKCGLKDEGVVVPRSLGAENRTETNVLATDAKSLSYNRTIQEILRILYGTGSERLP 240
           ANQLGKCGLKDEGVVVPRSLGAENRTETNVLATDAKSLSYNRTIQEILRILYGTGSERLP
Sbjct: 236 ANQLGKCGLKDEGVVVPRSLGAENRTETNVLATDAKSLSYNRTIQEILRILYGTGSERLP 295

Query: 241 GAFFPNGANGSIARRFLRGGII 242
           GAFFPNGANGSIARRFLRGGII
Sbjct: 296 GAFFPNGANGSIARRFLRGGII 312

[Close]

BLAST of CmoCh08G004050 vs. ExPASy TrEMBL
Match: A0A6J1KQW9 (desiccation-related protein PCC13-62-like OS=Cucurbita maxima OX=3661 GN=LOC111497857 PE=4 SV=1)

HSP 1 Score: 422.5 bits (1085), Expect = 1.1e-114
Identity = 222/262 (84.73%), Postives = 227/262 (86.64%), Query Frame = 0


Query: 1   MFLWGALGRGMDSIDPTLARGGPPPIGAQRANLDPM---------------------VSG 60
           MFLWGALGRGMDSIDPTLARGGPPPIGA+RANLDP+                     VSG
Sbjct: 56  MFLWGALGRGMDSIDPTLARGGPPPIGAERANLDPIVRNIIEEFGYEEIGQLKTLIQVSG 115

Query: 61  GLGIQRPLLNLSKDVFSDLFDKAAGRRLSPPFDPYVDTIHFLLAVNLFPYLGYTGLVEAA 120
           GLGIQRPLLNLSKDVFSDLFDKAAGRRLSPPFDPYVDTIHFLLAVNLFPYLGYTGLVEAA
Sbjct: 116 GLGIQRPLLNLSKDVFSDLFDKAAGRRLSPPFDPYVDTIHFLLAVNLFPYLGYTGLVEAA 175

Query: 121 PVLLFLESRRVVFEKLAAKLLSAESGQNAVMRTLLYERANETVEPYNMTVAEFTNLISTL 180
           P+L  LESR     KL AKLL+AESGQ+AVMRTLLYERANETVEPYNMTVAEFTNL STL
Sbjct: 176 PLLSLLESR-----KLGAKLLAAESGQSAVMRTLLYERANETVEPYNMTVAEFTNLTSTL 235

Query: 181 ANQLGKCGLKDEGVVVPRSLGAENRTETNVLATDAKSLSYNRTIQEILRILYGTGSERLP 240
            NQLGKCGLKDEGVVVPRSLGAENRTETNVLATD KSLSYNRTIQEILRILYGTGSERL 
Sbjct: 236 VNQLGKCGLKDEGVVVPRSLGAENRTETNVLATDTKSLSYNRTIQEILRILYGTGSERLS 295

Query: 241 GAFFPNGANGSIARRFLRGGII 242
           GAFFPNGANGSIAR F RGGII
Sbjct: 296 GAFFPNGANGSIARLFRRGGII 312

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BLAST of CmoCh08G004050 vs. ExPASy TrEMBL
Match: A0A0A0K965 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_7G396330 PE=4 SV=1)

HSP 1 Score: 317.4 bits (812), Expect = 5.2e-83
Identity = 166/258 (64.34%), Postives = 197/258 (76.36%), Query Frame = 0


Query: 2   FLWGALGRGMDSIDPTLARGGPPPIGAQRANLDPM---------------------VSGG 61
           FL  ALG G+DSI+P LA GGPPPIGAQ+ANLDP+                      +GG
Sbjct: 66  FLHCALGEGIDSINPNLAFGGPPPIGAQKANLDPVTANIAKEFGYQEIGQLRSVIEAAGG 125

Query: 62  LGIQRPLLNLSKDVFSDLFDKAAGRRLSPPFDPYVDTIHFLLAVNLFPYLGYTGLVEAAP 121
            GI+RPLLNLSK+VFSD+FD+A G +L P FDPY ++I+FLLA N+FPY G  GLV A P
Sbjct: 126 RGIKRPLLNLSKEVFSDIFDEAIGFKLEPRFDPYSNSINFLLAANMFPYTGLVGLVGATP 185

Query: 122 VLLFLESRRVVFEKLAAKLLSAESGQNAVMRTLLYERANETVEPYNMTVAEFTNLISTLA 181
           +LL  +SR     KLAA LL AESGQNAV+RTLLY+RANETV+PYN+TVAEFTNL STLA
Sbjct: 186 LLLLPQSR-----KLAASLLGAESGQNAVIRTLLYQRANETVDPYNITVAEFTNLTSTLA 245

Query: 182 NQLGKCGLKDEGVVVPRSLGAENRTETNVLATDAKSLSYNRTIQEILRILYGTGSERLPG 239
           N+LGKCGL+DEG++VP SLGAENRTE+N+LA D  S SY+RT++E+LRILYG+GSE   G
Sbjct: 246 NKLGKCGLRDEGIMVPLSLGAENRTESNILAADVNSRSYSRTVRELLRILYGSGSESKVG 305

[Close]

BLAST of CmoCh08G004050 vs. ExPASy TrEMBL
Match: A0A1S3BT08 (desiccation-related protein PCC13-62-like OS=Cucumis melo OX=3656 GN=LOC103492834 PE=4 SV=1)

HSP 1 Score: 312.4 bits (799), Expect = 1.7e-81
Identity = 165/258 (63.95%), Postives = 193/258 (74.81%), Query Frame = 0


Query: 2   FLWGALGRGMDSIDPTLARGGPPPIGAQRANLDPM---------------------VSGG 61
           FL  ALG+G+DSI+P LA GGPPPIGAQ+ANLD +                      +GG
Sbjct: 23  FLHSALGKGIDSINPNLAFGGPPPIGAQKANLDHVTAKMAEEFGNQEIGQLRAVIEAAGG 82

Query: 62  LGIQRPLLNLSKDVFSDLFDKAAGRRLSPPFDPYVDTIHFLLAVNLFPYLGYTGLVEAAP 121
            GI+RPLLNLSK+VFSD+FDKA G +L P FDPY ++I+FLLA NLFPY G  GLV A P
Sbjct: 83  RGIKRPLLNLSKEVFSDIFDKAIGFKLKPRFDPYSNSINFLLAANLFPYTGLVGLVGATP 142

Query: 122 VLLFLESRRVVFEKLAAKLLSAESGQNAVMRTLLYERANETVEPYNMTVAEFTNLISTLA 181
           +LL  +SR     KLAA LL AESGQNAV+RTLLY+RANETV PYN+TVAEFTN  STLA
Sbjct: 143 LLLLPQSR-----KLAASLLGAESGQNAVIRTLLYQRANETVHPYNITVAEFTNRTSTLA 202

Query: 182 NQLGKCGLKDEGVVVPRSLGAENRTETNVLATDAKSLSYNRTIQEILRILYGTGSERLPG 239
           N+L  CGLKDEG++VPRSLGAENRTE+N+LA D  S SY+RT++E+LRILY +GSE   G
Sbjct: 203 NKLANCGLKDEGIIVPRSLGAENRTESNILAADVYSRSYSRTVRELLRILYASGSESKVG 262

[Close]

BLAST of CmoCh08G004050 vs. ExPASy TrEMBL
Match: A0A6J1DBY4 (desiccation-related protein PCC13-62-like OS=Momordica charantia OX=3673 GN=LOC111018919 PE=4 SV=1)

HSP 1 Score: 280.8 bits (717), Expect = 5.4e-72
Identity = 149/254 (58.66%), Postives = 179/254 (70.47%), Query Frame = 0


Query: 1   MFLWGALGRGMDSIDPTLARGGPPPIGAQRANLDPMV---------------------SG 60
           M+  GALG+G DS+ P L   GPPPIGAQ ANL+P V                     +G
Sbjct: 59  MYFHGALGKGFDSLYPNLTFEGPPPIGAQIANLEPPVRQIIEEFGYEEVGQLRKILEATG 118

Query: 61  GLGIQRPLLNLSKDVFSDLFDKAAGRRLSPPFDPYVDTIHFLLAVNLFPYLGYTGLVEAA 120
           G+G+ RPLLNLSK+ F+++FDKA G +L PPFDPY +T +FLLA+ +FPY+G   LV+AA
Sbjct: 119 GVGVSRPLLNLSKEAFAEIFDKAVGFKLVPPFDPYANTTNFLLAIAIFPYIGQVALVDAA 178

Query: 121 PVLLFLESRRVVFEKLAAKLLSAESGQNAVMRTLLYERANETVEPYNMTVAEFTNLISTL 180
           P    L  R       AA +L+ E+GQ++V+RTLLY RANETV PYN+TVAEFTN  + L
Sbjct: 179 PAFPTLNYRXT-----AAAVLALEAGQSSVIRTLLYLRANETVFPYNLTVAEFTNRTAAL 238

Query: 181 ANQLGKCGLKDEGVVVPRSLGAENRTETNVLATDAKSLSYNRTIQEILRILYGTGSERLP 234
           AN+LG+CGLKDEGVVVP SLGAENRTETNVLA D KSLSY+RT+ EIL ILYGTG ER P
Sbjct: 239 ANRLGRCGLKDEGVVVPPSLGAENRTETNVLAGDDKSLSYSRTVPEILGILYGTGDERKP 298

[Close]

BLAST of CmoCh08G004050 vs. NCBI nr
Match: XP_022960201.1 (desiccation-related protein PCC13-62-like [Cucurbita moschata])

HSP 1 Score: 448.7 bits (1153), Expect = 3.1e-122
Identity = 236/262 (90.08%), Postives = 236/262 (90.08%), Query Frame = 0


Query: 1   MFLWGALGRGMDSIDPTLARGGPPPIGAQRANLDPM---------------------VSG 60
           MFLWGALGRGMDSIDPTLARGGPPPIGAQRANLDPM                     VSG
Sbjct: 56  MFLWGALGRGMDSIDPTLARGGPPPIGAQRANLDPMVRNIIEEFGYEEIGQLKTLIQVSG 115

Query: 61  GLGIQRPLLNLSKDVFSDLFDKAAGRRLSPPFDPYVDTIHFLLAVNLFPYLGYTGLVEAA 120
           GLGIQRPLLNLSKDVFSDLFDKAAGRRLSPPFDPYVDTIHFLLAVNLFPYLGYTGLVEAA
Sbjct: 116 GLGIQRPLLNLSKDVFSDLFDKAAGRRLSPPFDPYVDTIHFLLAVNLFPYLGYTGLVEAA 175

Query: 121 PVLLFLESRRVVFEKLAAKLLSAESGQNAVMRTLLYERANETVEPYNMTVAEFTNLISTL 180
           PVLLFLESRR     LAAKLLSAESGQNAVMRTLLYERANETVEPYNMTVAEFTNLISTL
Sbjct: 176 PVLLFLESRR-----LAAKLLSAESGQNAVMRTLLYERANETVEPYNMTVAEFTNLISTL 235

Query: 181 ANQLGKCGLKDEGVVVPRSLGAENRTETNVLATDAKSLSYNRTIQEILRILYGTGSERLP 240
           ANQLGKCGLKDEGVVVPRSLGAENRTETNVLATDAKSLSYNRTIQEILRILYGTGSERLP
Sbjct: 236 ANQLGKCGLKDEGVVVPRSLGAENRTETNVLATDAKSLSYNRTIQEILRILYGTGSERLP 295

Query: 241 GAFFPNGANGSIARRFLRGGII 242
           GAFFPNGANGSIARRFLRGGII
Sbjct: 296 GAFFPNGANGSIARRFLRGGII 312

[Close]

BLAST of CmoCh08G004050 vs. NCBI nr
Match: KAG6593187.1 (hypothetical protein SDJN03_12663, partial [Cucurbita argyrosperma subsp. sororia])

HSP 1 Score: 448.7 bits (1153), Expect = 3.1e-122
Identity = 236/262 (90.08%), Postives = 236/262 (90.08%), Query Frame = 0


Query: 1   MFLWGALGRGMDSIDPTLARGGPPPIGAQRANLDPM---------------------VSG 60
           MFLWGALGRGMDSIDPTLARGGPPPIGAQRANLDPM                     VSG
Sbjct: 56  MFLWGALGRGMDSIDPTLARGGPPPIGAQRANLDPMVRNIIEEFGYEEIGQLKTLIQVSG 115

Query: 61  GLGIQRPLLNLSKDVFSDLFDKAAGRRLSPPFDPYVDTIHFLLAVNLFPYLGYTGLVEAA 120
           GLGIQRPLLNLSKDVFSDLFDKAAGRRLSPPFDPYVDTIHFLLAVNLFPYLGYTGLVEAA
Sbjct: 116 GLGIQRPLLNLSKDVFSDLFDKAAGRRLSPPFDPYVDTIHFLLAVNLFPYLGYTGLVEAA 175

Query: 121 PVLLFLESRRVVFEKLAAKLLSAESGQNAVMRTLLYERANETVEPYNMTVAEFTNLISTL 180
           PVLLFLESRR     LAAKLLSAESGQNAVMRTLLYERANETVEPYNMTVAEFTNLISTL
Sbjct: 176 PVLLFLESRR-----LAAKLLSAESGQNAVMRTLLYERANETVEPYNMTVAEFTNLISTL 235

Query: 181 ANQLGKCGLKDEGVVVPRSLGAENRTETNVLATDAKSLSYNRTIQEILRILYGTGSERLP 240
           ANQLGKCGLKDEGVVVPRSLGAENRTETNVLATDAKSLSYNRTIQEILRILYGTGSERLP
Sbjct: 236 ANQLGKCGLKDEGVVVPRSLGAENRTETNVLATDAKSLSYNRTIQEILRILYGTGSERLP 295

Query: 241 GAFFPNGANGSIARRFLRGGII 242
           GAFFPNGANGSIARRFLRGGII
Sbjct: 296 GAFFPNGANGSIARRFLRGGII 312

[Close]

BLAST of CmoCh08G004050 vs. NCBI nr
Match: XP_023515237.1 (desiccation-related protein PCC13-62-like [Cucurbita pepo subsp. pepo])

HSP 1 Score: 442.2 bits (1136), Expect = 2.9e-120
Identity = 232/262 (88.55%), Postives = 235/262 (89.69%), Query Frame = 0


Query: 1   MFLWGALGRGMDSIDPTLARGGPPPIGAQRANLDPM---------------------VSG 60
           MFLWGALGRGMDSIDPTLARGGPPPIGAQRANLDP+                     VSG
Sbjct: 56  MFLWGALGRGMDSIDPTLARGGPPPIGAQRANLDPIVRNIIEEFGYEEIGQLKTLIQVSG 115

Query: 61  GLGIQRPLLNLSKDVFSDLFDKAAGRRLSPPFDPYVDTIHFLLAVNLFPYLGYTGLVEAA 120
           GLGIQRPLLNLSKDVFSDLFDKAAGRRLSPPFDPYVDTIHFLLAVNLFPYLGYTGLVEAA
Sbjct: 116 GLGIQRPLLNLSKDVFSDLFDKAAGRRLSPPFDPYVDTIHFLLAVNLFPYLGYTGLVEAA 175

Query: 121 PVLLFLESRRVVFEKLAAKLLSAESGQNAVMRTLLYERANETVEPYNMTVAEFTNLISTL 180
           P+LLFLESR     KLAAKLLSAESGQ+AVMRTLLYERANETVEPYNMTVAEFTNL STL
Sbjct: 176 PLLLFLESR-----KLAAKLLSAESGQSAVMRTLLYERANETVEPYNMTVAEFTNLTSTL 235

Query: 181 ANQLGKCGLKDEGVVVPRSLGAENRTETNVLATDAKSLSYNRTIQEILRILYGTGSERLP 240
           ANQLGKCGLKDEGVVVPRSLGAENRTETNVLATDAKSLSYNRTIQEILRILYGTGSERLP
Sbjct: 236 ANQLGKCGLKDEGVVVPRSLGAENRTETNVLATDAKSLSYNRTIQEILRILYGTGSERLP 295

Query: 241 GAFFPNGANGSIARRFLRGGII 242
           GAFFPNGANGSIARRFLRGGII
Sbjct: 296 GAFFPNGANGSIARRFLRGGII 312

[Close]

BLAST of CmoCh08G004050 vs. NCBI nr
Match: XP_023004612.1 (desiccation-related protein PCC13-62-like [Cucurbita maxima])

HSP 1 Score: 422.5 bits (1085), Expect = 2.4e-114
Identity = 222/262 (84.73%), Postives = 227/262 (86.64%), Query Frame = 0


Query: 1   MFLWGALGRGMDSIDPTLARGGPPPIGAQRANLDPM---------------------VSG 60
           MFLWGALGRGMDSIDPTLARGGPPPIGA+RANLDP+                     VSG
Sbjct: 56  MFLWGALGRGMDSIDPTLARGGPPPIGAERANLDPIVRNIIEEFGYEEIGQLKTLIQVSG 115

Query: 61  GLGIQRPLLNLSKDVFSDLFDKAAGRRLSPPFDPYVDTIHFLLAVNLFPYLGYTGLVEAA 120
           GLGIQRPLLNLSKDVFSDLFDKAAGRRLSPPFDPYVDTIHFLLAVNLFPYLGYTGLVEAA
Sbjct: 116 GLGIQRPLLNLSKDVFSDLFDKAAGRRLSPPFDPYVDTIHFLLAVNLFPYLGYTGLVEAA 175

Query: 121 PVLLFLESRRVVFEKLAAKLLSAESGQNAVMRTLLYERANETVEPYNMTVAEFTNLISTL 180
           P+L  LESR     KL AKLL+AESGQ+AVMRTLLYERANETVEPYNMTVAEFTNL STL
Sbjct: 176 PLLSLLESR-----KLGAKLLAAESGQSAVMRTLLYERANETVEPYNMTVAEFTNLTSTL 235

Query: 181 ANQLGKCGLKDEGVVVPRSLGAENRTETNVLATDAKSLSYNRTIQEILRILYGTGSERLP 240
            NQLGKCGLKDEGVVVPRSLGAENRTETNVLATD KSLSYNRTIQEILRILYGTGSERL 
Sbjct: 236 VNQLGKCGLKDEGVVVPRSLGAENRTETNVLATDTKSLSYNRTIQEILRILYGTGSERLS 295

Query: 241 GAFFPNGANGSIARRFLRGGII 242
           GAFFPNGANGSIAR F RGGII
Sbjct: 296 GAFFPNGANGSIARLFRRGGII 312

[Close]

BLAST of CmoCh08G004050 vs. NCBI nr
Match: KAG7025577.1 (hypothetical protein SDJN02_12074, partial [Cucurbita argyrosperma subsp. argyrosperma])

HSP 1 Score: 361.7 bits (927), Expect = 5.0e-96
Identity = 192/218 (88.07%), Postives = 192/218 (88.07%), Query Frame = 0


Query: 1   MFLWGALGRGMDSIDPTLARGGPPPIGAQRANLDPM---------------------VSG 60
           MFLWGALGRGMDSIDPTLARGGPPPIGAQRANLDPM                     VSG
Sbjct: 70  MFLWGALGRGMDSIDPTLARGGPPPIGAQRANLDPMVRNIIEEFGYEEIGQLKTLIQVSG 129

Query: 61  GLGIQRPLLNLSKDVFSDLFDKAAGRRLSPPFDPYVDTIHFLLAVNLFPYLGYTGLVEAA 120
           GLGIQRPLLNLSKDVFSDLFDKAAGRRLSPPFDPYVDTIHFLLAVNLFPYLGYTGLVEAA
Sbjct: 130 GLGIQRPLLNLSKDVFSDLFDKAAGRRLSPPFDPYVDTIHFLLAVNLFPYLGYTGLVEAA 189

Query: 121 PVLLFLESRRVVFEKLAAKLLSAESGQNAVMRTLLYERANETVEPYNMTVAEFTNLISTL 180
           PVLLFLESRR     LAAKLLSAESGQNAVMRTLLYERANETVEPYNMTVAEFTNLISTL
Sbjct: 190 PVLLFLESRR-----LAAKLLSAESGQNAVMRTLLYERANETVEPYNMTVAEFTNLISTL 249

Query: 181 ANQLGKCGLKDEGVVVPRSLGAENRTETNVLATDAKSL 198
           ANQLGKCGLKDEGVVVPRSLGAENRTETNVLATDAKSL
Sbjct: 250 ANQLGKCGLKDEGVVVPRSLGAENRTETNVLATDAKSL 282

[Close]

BLAST of CmoCh08G004050 vs. TAIR 10
Match: AT3G62730.1 (unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: endomembrane system; EXPRESSED IN: 13 plant structures; EXPRESSED DURING: LP.04 four leaves visible, 4 anthesis, LP.02 two leaves visible, petal differentiation and expansion stage; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT1G47980.1); Has 172 Blast hits to 172 proteins in 41 species: Archae - 0; Bacteria - 73; Metazoa - 0; Fungi - 0; Plants - 99; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). )

HSP 1 Score: 251.9 bits (642), Expect = 5.1e-67
Identity = 136/258 (52.71%), Postives = 175/258 (67.83%), Query Frame = 0


Query: 2   FLWGALGRGMDSIDPTLARGGPPPIGAQRANLDPMVS-----------GGL--------G 61
           FL GA G+G+D+ + TLA+GGPPPIGA++ANLDP+ +           G L        G
Sbjct: 52  FLKGATGKGLDAYNATLAKGGPPPIGAKKANLDPITNRIIEEFGYQEIGHLRAITDMTGG 111

Query: 62  IQRPLLNLSKDVFSDLFDKAAGRRLSPPFDPYVDTIHFLLAVNLFPYLGYTGLVEAAPVL 121
           I RPL+NL+++ F+   D+A GR+ +P FDPY +++++LLA    PY+G TG V   P L
Sbjct: 112 IPRPLINLTRENFAVFMDRAVGRKSNPRFDPYANSLNYLLASYYIPYVGLTGYVGTIPYL 171

Query: 122 LFLESRRVVFEKLAAKLLSAESGQNAVMRTLLYERANETVEPY-NMTVAEFTNLISTLAN 181
           ++        +KL A LL  ESGQ+AV+RTLLYER NE VE Y  +TVAE TN IS L N
Sbjct: 172 VYFN-----IKKLVAGLLGVESGQDAVIRTLLYERQNEKVEEYGGVTVAELTNEISNLRN 231

Query: 182 QLGKCGLKDEGVVVPRSLGAENRTETNVLATDAKSLSYNRTIQEILRILYGTGSERLPGA 240
           +LG CG+KDEG+ VP  LGAENRT +N+L+ D  SLSY+RT QEILR++YGTG E  PG 
Sbjct: 232 ELGMCGIKDEGLCVPLWLGAENRTTSNILSADPYSLSYDRTAQEILRVMYGTGDEHRPGG 291

[Close]

BLAST of CmoCh08G004050 vs. TAIR 10
Match: AT1G47980.1 (unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: endomembrane system; EXPRESSED IN: 6 plant structures; EXPRESSED DURING: 4 anthesis, F mature embryo stage, petal differentiation and expansion stage, E expanded cotyledon stage; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT3G62730.1); Has 169 Blast hits to 169 proteins in 41 species: Archae - 0; Bacteria - 68; Metazoa - 0; Fungi - 0; Plants - 101; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). )

HSP 1 Score: 224.6 bits (571), Expect = 8.8e-59
Identity = 124/254 (48.82%), Postives = 164/254 (64.57%), Query Frame = 0


Query: 2   FLWGALGRGMDSIDPTLARGGPPPIGAQRANLDPMVS-----------GGL--------G 61
           FL+GALG G+D + P L  GGP PIGAQ+ANLDP+             G L        G
Sbjct: 61  FLFGALGLGLDKVAPNLTMGGPSPIGAQKANLDPLTRDIILQFAWQEVGHLRAIKKTVKG 120

Query: 62  IQRPLLNLSKDVFSDLFDKAAGRRLSPPFDPYVDTIHFLLAVNLFPYLGYTGLVEAAPVL 121
             RP L+LSK  F+ + DKA G +  PPF+PY ++ ++L+A  L PY+G TG V A P L
Sbjct: 121 FARPQLDLSKKAFAKVMDKAFGVKFVPPFNPYANSYNYLIASYLVPYVGLTGYVGANPKL 180

Query: 122 LFLESRRVVFEKLAAKLLSAESGQNAVMRTLLYERANETVEPYNMTVAEFTNLISTLANQ 181
               SR     KL A LL  ESGQ+AV+R +LY RA   V PY +TVA FT+ IS L N+
Sbjct: 181 QCPASR-----KLVAGLLGVESGQDAVIRGMLYARAAHIVYPYGVTVAAFTDKISDLRNK 240

Query: 182 LGKCGLKDEGVVVPRSLGAENRTETNVLATDAKSLSYNRTIQEILRILYGTGSERLPGAF 237
           LGK G+KDEG++VP+ +GAE +   NVL  +  SLS++RT +EILRI+YG+G+E +PG F
Sbjct: 241 LGKAGVKDEGLIVPKFMGAEGQVIGNVLVGNELSLSFDRTPEEILRIVYGSGNESVPGGF 300

The following BLAST results are available for this feature:

BLAST of CmoCh08G004050 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
P22242	2.8e-49	44.53	Desiccation-related protein PCC13-62 OS=Craterostigma plantagineum OX=4153 PE=2 ...	[more]

BLAST of CmoCh08G004050 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A6J1H6Z4	1.5e-122	90.08	desiccation-related protein PCC13-62-like OS=Cucurbita moschata OX=3662 GN=LOC11...	[more]
A0A6J1KQW9	1.1e-114	84.73	desiccation-related protein PCC13-62-like OS=Cucurbita maxima OX=3661 GN=LOC1114...	[more]
A0A0A0K965	5.2e-83	64.34	Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_7G396330 PE=4 SV=1	[more]
A0A1S3BT08	1.7e-81	63.95	desiccation-related protein PCC13-62-like OS=Cucumis melo OX=3656 GN=LOC10349283...	[more]
A0A6J1DBY4	5.4e-72	58.66	desiccation-related protein PCC13-62-like OS=Momordica charantia OX=3673 GN=LOC1...	[more]

BLAST of CmoCh08G004050 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_022960201.1	3.1e-122	90.08	desiccation-related protein PCC13-62-like [Cucurbita moschata]	[more]
KAG6593187.1	3.1e-122	90.08	hypothetical protein SDJN03_12663, partial [Cucurbita argyrosperma subsp. sorori...	[more]
XP_023515237.1	2.9e-120	88.55	desiccation-related protein PCC13-62-like [Cucurbita pepo subsp. pepo]	[more]
XP_023004612.1	2.4e-114	84.73	desiccation-related protein PCC13-62-like [Cucurbita maxima]	[more]
KAG7025577.1	5.0e-96	88.07	hypothetical protein SDJN02_12074, partial [Cucurbita argyrosperma subsp. argyro...	[more]

BLAST of CmoCh08G004050 vs. TAIR 10


Match Name	E-value	Identity	Description
AT3G62730.1	5.1e-67	52.71	unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biologic...	[more]
AT1G47980.1	8.8e-59	48.82	unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biologic...	[more]

InterPro

Analysis Name: InterPro Annotations of Cucurbita moschata (Rifu) v1
Date Performed: 2021-10-25


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	PFAM	PF13668	Ferritin_2	coord: 35..136 e-value: 9.8E-7 score: 29.0
None	No IPR available	PANTHER	PTHR31694:SF12	PROTEIN PCC13-62, PUTATIVE, EXPRESSED-RELATED	coord: 2..237
None	No IPR available	PANTHER	PTHR31694	DESICCATION-LIKE PROTEIN	coord: 2..237

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
CmoCh08G004050.1	CmoCh08G004050.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
cellular_component	GO:0016020	membrane