CmoCh08G003930 (gene) Cucurbita moschata (Rifu) v1

Overview


Name	CmoCh08G003930
Type	gene
Organism	Cucurbita moschata (Cucurbita moschata (Rifu) v1)
Description	Cell division protein like
Location	Cmo_Chr08: 2421252 .. 2423350 (-)
RNA-Seq Expression	CmoCh08G003930
Synteny	CmoCh08G003930

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonfive_prime_UTRpolypeptideCDSthree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

TTCTTTTATCAGCTTATTTTTCTTTGAAAATGGGGGAAGCAAACGACGTCGTTCTTCATGCTATAAATTTCTCCGTCTTAGTCACATTACTAAAATTTCAGACATGCCAGGTCTATTTTCTCGACTGGGAAATTCCATCCCCTTCTCCGGCCTTTTCAGGTAATTCCTCAAAACTAGTTTCTAGAGATTCTCTTACCAGCGTTGTTTGTTGAAAACTTTCTGTAACCTATAACTTTTGGACTAAGAAATGTTTATTCCAATGAATAATGTTACTGATGATTTGGTTTGCTTAGTAATACAATCGCGTCGGTCAAATTCTTGTTAATTTGTAATATTGATGTCATCGCGAGTGCCGGAATCGCAGTTTTATCATCATGTTTATGTGCATGTCTTTGTAAATTTGATTTTGGTGGCTTTGTTATTTCTTTTGCTTGAGAGGTGCTAATTTCTAAATCGAAAAATCGTTGGTACTATGCTTATGCTGAATTAATGTGATTTTTAATGCAAAATCTGATGGTAAGGGGCTCTAGAAGTGTTCTGTACAAACAGGTTTTGGTTAGTGGAACAAAATTTTTATTGAACGAGGTCTGGTTAGCTACTTTTTTCAAGTTAATTCTCTTTGATGTTTTTGTGGATGGTCTATTTCTGTGAACTAAAATTCTTGCATACTTGTGAATATTGATTTTAAGTTTAGATCAGCTTTAACTCTTATATGAAGAAAAGTGCACAATAACCTTAACTTTACAGCCCACCTAATTATTTCTAATCGCAGTTTTAAAAAACAGAAGCATAAAGTTGTTTGTCTAGGACAACTCTTAATGTTTTTCTTTCCCCGTATAGGCAACTGGAGCAAGAGATGGAAACTGTCATAAGGGTTTTGCAGCCTGGACCTTTGGGGATTATTGAACACAAGTTTTCTGCTGAGGAGATTCGCCAGGCACAAGCCACTGTTCGCGAAGCAGTAAATAACTGGCGAAGGAATACAAGTATTGAAAAACAAAGTAGTATGTCAAGTAATCGTATTTAGGAATTATACTGTTTCCATAGAGATTTTGAATGACATGTTGTGTAATTGCTTTATGAGTTTCTGAATAAAAATTAGATTAAATAGTGACTTTCAGTAGACTTGAAATAAAAATTGAACTCAAAAGTATGAGATTGATAAAAATAGTAAGCCTACAGAGCATTTTACTTTCACTTGAAAAAACTTGTGTGGGTCTTTAGGCGGGAATGGAGTAGGTATGTGAGATCCCACATTGGTTGGAGAAGGAAACGAAACATTCCTTATAAGAATGTGGAAACTTCTCCCTAGTAGACACATTTTAAAACCTTGAGGGGAAGCCCGGAAGGGAAAGTCCAAAGAGGACAATATCTGCTAGCGGTAGGCTTGAGCTGTTACAAATGGTATCAGAATAAGGCACCAAACTGTGTGCCAGCAAGGACGTTGGGCCCTCAAAGGGGGTGGATTGTGAGATCCCACATTGGTTGGAGAGGGGAACGAAGCAACTCTTATAAGGGTGTGGAAACCTCTCTCTAGTAGACGCGTTTTGAAACCTTGAGAGGAAGTCCGGAAGGGAAAGCCCGAAGAGGACAATATCTGCTTACAATGAATGGGCTTGGGCTGTTACAGGGAAGCAGCTACAGCTACAATTGGTTAAGTAGATTTTTTCCTCGGTAAATTCTACTAGTAACAGATTGTAGTGACTAGAGAAAAGGACACATTGGGGGAAGAGAGTCAGTAGAGTGCGATGCAAGGGAGGGAAGCAATTAGTCATTTAGTAGGAAAGAACTAGGGATTTCGGTCTTCATTTTGGAGAGCACCAGACCTCTTGAATGCATGGTAGTTTTGTAGCTCTTCTTTGTAAATTCAATACAATTATCAAATTCACTTCTCTAACTATATCAGAATTCTATATTGGACATTGGGCTAGCACATGAAGAACATTATTTGGTATCTACTTTCTTTCTCCCAAGTGTTCATCCATTGCGTCCTTTCATTTTTGGCTTTTCTTTTCTTTCTTTCTTCTTCTTCTTTATTTATTTATTTTTTTAAATTTGAAAAAAATGCTTTTCTGACCTACGAAAATACTACCCTTTAG

mRNA sequence

TTCTTTTATCAGCTTATTTTTCTTTGAAAATGGGGGAAGCAAACGACGTCGTTCTTCATGCTATAAATTTCTCCGTCTTAGTCACATTACTAAAATTTCAGACATGCCAGGTCTATTTTCTCGACTGGGAAATTCCATCCCCTTCTCCGGCCTTTTCAGGCAACTGGAGCAAGAGATGGAAACTGTCATAAGGGTTTTGCAGCCTGGACCTTTGGGGATTATTGAACACAAGTTTTCTGCTGAGGAGATTCGCCAGGCACAAGCCACTGTTCGCGAAGCAGTAAATAACTGGCGAAGGAATACAAGTATTGAAAAACAAAGTAGTATGTCAAGTAATCGTATTTAGGAATTATACTGTTTCCATAGAGATTTTGAATGACATGTTGTGTAATTGCTTTATGAGTTTCTGAATAAAAATTAGATTAAATAGTGACTTTCAGTAGACTTGAAATAAAAATTGAACTCAAAAGTATGAGATTGATAAAAATAGTAAGCCTACAGAGCATTTTACTTTCACTTGAAAAAACTTGTGTGGGTCTTTAGGCGGGAATGGAGTAGGTATGTGAGATCCCACATTGGTTGGAGAAGGAAACGAAACATTCCTTATAAGAATGTGGAAACTTCTCCCTAGTAGACACATTTTAAAACCTTGAGGGGAAGCCCGGAAGGGAAAGTCCAAAGAGGACAATATCTGCTAGCGGTAGGCTTGAGCTGTTACAAATGGTATCAGAATAAGGCACCAAACTGTGTGCCAGCAAGGACGTTGGGCCCTCAAAGGGGGTGGATTGTGAGATCCCACATTGGTTGGAGAGGGGAACGAAGCAACTCTTATAAGGGTGTGGAAACCTCTCTCTAGTAGACGCGTTTTGAAACCTTGAGAGGAAGTCCGGAAGGGAAAGCCCGAAGAGGACAATATCTGCTTACAATGAATGGGCTTGGGCTGTTACAGGGAAGCAGCTACAGCTACAATTGGTTAAGTAGATTTTTTCCTCGGTAAATTCTACTAGTAACAGATTGTAGTGACTAGAGAAAAGGACACATTGGGGGAAGAGAGTCAGTAGAGTGCGATGCAAGGGAGGGAAGCAATTAGTCATTTAGTAGGAAAGAACTAGGGATTTCGGTCTTCATTTTGGAGAGCACCAGACCTCTTGAATGCATGGTAGTTTTGTAGCTCTTCTTTGTAAATTCAATACAATTATCAAATTCACTTCTCTAACTATATCAGAATTCTATATTGGACATTGGGCTAGCACATGAAGAACATTATTTGGTATCTACTTTCTTTCTCCCAAGTGTTCATCCATTGCGTCCTTTCATTTTTGGCTTTTCTTTTCTTTCTTTCTTCTTCTTCTTTATTTATTTATTTTTTTAAATTTGAAAAAAATGCTTTTCTGACCTACGAAAATACTACCCTTTAG

Coding sequence (CDS)

ATGCCAGGTCTATTTTCTCGACTGGGAAATTCCATCCCCTTCTCCGGCCTTTTCAGGCAACTGGAGCAAGAGATGGAAACTGTCATAAGGGTTTTGCAGCCTGGACCTTTGGGGATTATTGAACACAAGTTTTCTGCTGAGGAGATTCGCCAGGCACAAGCCACTGTTCGCGAAGCAGTAAATAACTGGCGAAGGAATACAAGTATTGAAAAACAAAGTAGTATGTCAAGTAATCGTATTTAG

Protein sequence

MPGLFSRLGNSIPFSGLFRQLEQEMETVIRVLQPGPLGIIEHKFSAEEIRQAQATVREAVNNWRRNTSIEKQSSMSSNRI

Homology

[Close]

BLAST of CmoCh08G003930 vs. ExPASy TrEMBL
Match: A0A6J1H9I7 (uncharacterized protein LOC111460845 OS=Cucurbita moschata OX=3662 GN=LOC111460845 PE=4 SV=1)

HSP 1 Score: 157.5 bits (397), Expect = 2.3e-35
Identity = 80/80 (100.00%), Postives = 80/80 (100.00%), Query Frame = 0


Query: 1  MPGLFSRLGNSIPFSGLFRQLEQEMETVIRVLQPGPLGIIEHKFSAEEIRQAQATVREAV 60
          MPGLFSRLGNSIPFSGLFRQLEQEMETVIRVLQPGPLGIIEHKFSAEEIRQAQATVREAV
Sbjct: 1  MPGLFSRLGNSIPFSGLFRQLEQEMETVIRVLQPGPLGIIEHKFSAEEIRQAQATVREAV 60

Query: 61 NNWRRNTSIEKQSSMSSNRI 81
          NNWRRNTSIEKQSSMSSNRI
Sbjct: 61 NNWRRNTSIEKQSSMSSNRI 80

[Close]

BLAST of CmoCh08G003930 vs. ExPASy TrEMBL
Match: A0A6J1KSW4 (uncharacterized protein LOC111497926 OS=Cucurbita maxima OX=3661 GN=LOC111497926 PE=4 SV=1)

HSP 1 Score: 141.4 bits (355), Expect = 1.7e-30
Identity = 72/75 (96.00%), Postives = 72/75 (96.00%), Query Frame = 0


Query: 1  MPGLFSRLGNSIPFSGLFRQLEQEMETVIRVLQPGPLGIIEHKFSAEEIRQAQATVREAV 60
          MP LFSRLGNSIPFSGLFRQLEQEMETVIRVLQPGPLGIIEHKFSAEEIR AQATVREAV
Sbjct: 1  MPVLFSRLGNSIPFSGLFRQLEQEMETVIRVLQPGPLGIIEHKFSAEEIRWAQATVREAV 60

Query: 61 NNWRRNTSIEKQSSM 76
          NNWRRNT IEKQSSM
Sbjct: 61 NNWRRNTCIEKQSSM 75

[Close]

BLAST of CmoCh08G003930 vs. ExPASy TrEMBL
Match: A0A0A0K7N1 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_7G394630 PE=4 SV=1)

HSP 1 Score: 136.0 bits (341), Expect = 7.1e-29
Identity = 68/74 (91.89%), Postives = 73/74 (98.65%), Query Frame = 0


Query: 5  FSRLGNSIPFSGLFRQLEQEMETVIRVLQPGPLGIIEHKFSAEEIRQAQATVREAVNNWR 64
          FSRLG+SIPFSGLFRQLEQEMETVIRVLQPGPLGIIEHKFSAEE+R+AQ+TVREAVNNWR
Sbjct: 5  FSRLGSSIPFSGLFRQLEQEMETVIRVLQPGPLGIIEHKFSAEEMRRAQSTVREAVNNWR 64

Query: 65 RNTSIEKQSSMSSN 79
          RNT IEKQSS+SSN
Sbjct: 65 RNTIIEKQSSISSN 78

[Close]

BLAST of CmoCh08G003930 vs. ExPASy TrEMBL
Match: A0A1S3BRC3 (uncharacterized protein LOC103492858 OS=Cucumis melo OX=3656 GN=LOC103492858 PE=4 SV=1)

HSP 1 Score: 136.0 bits (341), Expect = 7.1e-29
Identity = 68/74 (91.89%), Postives = 72/74 (97.30%), Query Frame = 0


Query: 5  FSRLGNSIPFSGLFRQLEQEMETVIRVLQPGPLGIIEHKFSAEEIRQAQATVREAVNNWR 64
          FSRLGNSIPFSGLFRQLEQEMETVIRVLQPGPLGIIEHKFSAEE+R+AQ+TVREAVNNWR
Sbjct: 5  FSRLGNSIPFSGLFRQLEQEMETVIRVLQPGPLGIIEHKFSAEEMRRAQSTVREAVNNWR 64

Query: 65 RNTSIEKQSSMSSN 79
          RNT IEKQS +SSN
Sbjct: 65 RNTLIEKQSCISSN 78

[Close]

BLAST of CmoCh08G003930 vs. ExPASy TrEMBL
Match: A0A6J1D4Y2 (uncharacterized protein LOC111017642 OS=Momordica charantia OX=3673 GN=LOC111017642 PE=4 SV=1)

HSP 1 Score: 134.8 bits (338), Expect = 1.6e-28
Identity = 69/80 (86.25%), Postives = 73/80 (91.25%), Query Frame = 0


Query: 1  MPGLFSRLGNSIPFSGLFRQLEQEMETVIRVLQPGPLGIIEHKFSAEEIRQAQATVREAV 60
          MP   SRLGNSIPFSG FRQLEQEM TVIRVLQPGPLGIIEHKFSAEE+RQAQ+TVREAV
Sbjct: 1  MPISLSRLGNSIPFSGTFRQLEQEMXTVIRVLQPGPLGIIEHKFSAEEMRQAQSTVREAV 60

Query: 61 NNWRRNTSIEKQSSMSSNRI 81
          NNW RNTSIEKQSS+SS+ I
Sbjct: 61 NNWXRNTSIEKQSSISSSHI 80

[Close]

BLAST of CmoCh08G003930 vs. NCBI nr
Match: XP_022959944.1 (uncharacterized protein LOC111460845 [Cucurbita moschata])

HSP 1 Score: 157.5 bits (397), Expect = 4.7e-35
Identity = 80/80 (100.00%), Postives = 80/80 (100.00%), Query Frame = 0


Query: 1  MPGLFSRLGNSIPFSGLFRQLEQEMETVIRVLQPGPLGIIEHKFSAEEIRQAQATVREAV 60
          MPGLFSRLGNSIPFSGLFRQLEQEMETVIRVLQPGPLGIIEHKFSAEEIRQAQATVREAV
Sbjct: 1  MPGLFSRLGNSIPFSGLFRQLEQEMETVIRVLQPGPLGIIEHKFSAEEIRQAQATVREAV 60

Query: 61 NNWRRNTSIEKQSSMSSNRI 81
          NNWRRNTSIEKQSSMSSNRI
Sbjct: 61 NNWRRNTSIEKQSSMSSNRI 80

[Close]

BLAST of CmoCh08G003930 vs. NCBI nr
Match: XP_023513754.1 (uncharacterized protein LOC111778268 [Cucurbita pepo subsp. pepo])

HSP 1 Score: 152.5 bits (384), Expect = 1.5e-33
Identity = 78/80 (97.50%), Postives = 79/80 (98.75%), Query Frame = 0


Query: 1  MPGLFSRLGNSIPFSGLFRQLEQEMETVIRVLQPGPLGIIEHKFSAEEIRQAQATVREAV 60
          MP LFSRLGNSIPFSGLFRQLEQEMETVIRVLQPGPLGIIEHKFSAEEIR+AQATVREAV
Sbjct: 1  MPVLFSRLGNSIPFSGLFRQLEQEMETVIRVLQPGPLGIIEHKFSAEEIRRAQATVREAV 60

Query: 61 NNWRRNTSIEKQSSMSSNRI 81
          NNWRRNTSIEKQSSMSSNRI
Sbjct: 61 NNWRRNTSIEKQSSMSSNRI 80

[Close]

BLAST of CmoCh08G003930 vs. NCBI nr
Match: KAG6593168.1 (hypothetical protein SDJN03_12644, partial [Cucurbita argyrosperma subsp. sororia] >KAG6593174.1 hypothetical protein SDJN03_12650, partial [Cucurbita argyrosperma subsp. sororia] >KAG7025565.1 hypothetical protein SDJN02_12061, partial [Cucurbita argyrosperma subsp. argyrosperma])

HSP 1 Score: 151.0 bits (380), Expect = 4.4e-33
Identity = 77/80 (96.25%), Postives = 79/80 (98.75%), Query Frame = 0


Query: 1  MPGLFSRLGNSIPFSGLFRQLEQEMETVIRVLQPGPLGIIEHKFSAEEIRQAQATVREAV 60
          MP LFSRLGNSIPFSGLFRQLEQEMETVIRVLQPGPLGIIEHKFSAEEIR+AQATVREAV
Sbjct: 1  MPVLFSRLGNSIPFSGLFRQLEQEMETVIRVLQPGPLGIIEHKFSAEEIRRAQATVREAV 60

Query: 61 NNWRRNTSIEKQSSMSSNRI 81
          NNWRRNTSIEKQSS+SSNRI
Sbjct: 61 NNWRRNTSIEKQSSVSSNRI 80

[Close]

BLAST of CmoCh08G003930 vs. NCBI nr
Match: XP_023004711.1 (uncharacterized protein LOC111497926 [Cucurbita maxima])

HSP 1 Score: 141.4 bits (355), Expect = 3.5e-30
Identity = 72/75 (96.00%), Postives = 72/75 (96.00%), Query Frame = 0


Query: 1  MPGLFSRLGNSIPFSGLFRQLEQEMETVIRVLQPGPLGIIEHKFSAEEIRQAQATVREAV 60
          MP LFSRLGNSIPFSGLFRQLEQEMETVIRVLQPGPLGIIEHKFSAEEIR AQATVREAV
Sbjct: 1  MPVLFSRLGNSIPFSGLFRQLEQEMETVIRVLQPGPLGIIEHKFSAEEIRWAQATVREAV 60

Query: 61 NNWRRNTSIEKQSSM 76
          NNWRRNT IEKQSSM
Sbjct: 61 NNWRRNTCIEKQSSM 75

[Close]

BLAST of CmoCh08G003930 vs. NCBI nr
Match: XP_038876733.1 (uncharacterized protein LOC120069118 [Benincasa hispida])

HSP 1 Score: 137.9 bits (346), Expect = 3.9e-29
Identity = 69/73 (94.52%), Postives = 71/73 (97.26%), Query Frame = 0


Query: 1  MPGLFSRLGNSIPFSGLFRQLEQEMETVIRVLQPGPLGIIEHKFSAEEIRQAQATVREAV 60
          MP  FSRLGNSIPFSGLFRQLEQEMETVIRVLQPGPLGIIEHKFSAEE+RQAQ+TVREAV
Sbjct: 1  MPISFSRLGNSIPFSGLFRQLEQEMETVIRVLQPGPLGIIEHKFSAEEMRQAQSTVREAV 60

Query: 61 NNWRRNTSIEKQS 74
          NNWRRNTSIEKQS
Sbjct: 61 NNWRRNTSIEKQS 73

[Close]

BLAST of CmoCh08G003930 vs. TAIR 10
Match: AT3G62920.1 (unknown protein; Has 25 Blast hits to 25 proteins in 11 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 25; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). )

HSP 1 Score: 94.4 bits (233), Expect = 4.6e-20
Identity = 44/74 (59.46%), Postives = 60/74 (81.08%), Query Frame = 0


Query: 7  RLGNSIPFSGLFRQLEQEMETVIRVLQPGPLGIIEHKFSAEEIRQAQATVREAVNNWRRN 66
          R+  ++PFSG+ RQLE+E ETVI VLQPGPLGIIEHKFSA+EIR+A+ATV  AV++WRR+
Sbjct: 5  RIARALPFSGILRQLEKEAETVINVLQPGPLGIIEHKFSAQEIREAKATVSRAVDSWRRH 64

Query: 67 TSIEKQSSMSSNRI 81
          + +E  + +  + I
Sbjct: 65 SEVEHANGLLKDYI 78

The following BLAST results are available for this feature:

BLAST of CmoCh08G003930 vs.


Match Name	E-value	Identity	Description

BLAST of CmoCh08G003930 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A6J1H9I7	2.3e-35	100.00	uncharacterized protein LOC111460845 OS=Cucurbita moschata OX=3662 GN=LOC1114608...	[more]
A0A6J1KSW4	1.7e-30	96.00	uncharacterized protein LOC111497926 OS=Cucurbita maxima OX=3661 GN=LOC111497926...	[more]
A0A0A0K7N1	7.1e-29	91.89	Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_7G394630 PE=4 SV=1	[more]
A0A1S3BRC3	7.1e-29	91.89	uncharacterized protein LOC103492858 OS=Cucumis melo OX=3656 GN=LOC103492858 PE=...	[more]
A0A6J1D4Y2	1.6e-28	86.25	uncharacterized protein LOC111017642 OS=Momordica charantia OX=3673 GN=LOC111017...	[more]

BLAST of CmoCh08G003930 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_022959944.1	4.7e-35	100.00	uncharacterized protein LOC111460845 [Cucurbita moschata]	[more]
XP_023513754.1	1.5e-33	97.50	uncharacterized protein LOC111778268 [Cucurbita pepo subsp. pepo]	[more]
KAG6593168.1	4.4e-33	96.25	hypothetical protein SDJN03_12644, partial [Cucurbita argyrosperma subsp. sorori...	[more]
XP_023004711.1	3.5e-30	96.00	uncharacterized protein LOC111497926 [Cucurbita maxima]	[more]
XP_038876733.1	3.9e-29	94.52	uncharacterized protein LOC120069118 [Benincasa hispida]	[more]

BLAST of CmoCh08G003930 vs. TAIR 10


Match Name	E-value	Identity	Description
AT3G62920.1	4.6e-20	59.46	unknown protein; Has 25 Blast hits to 25 proteins in 11 species: Archae - 0; Bac...	[more]

InterPro

Analysis Name: InterPro Annotations of Cucurbita moschata (Rifu) v1
Date Performed: 2021-10-25


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	PANTHER	PTHR37235	ZINC METALLOPROTEINASE AUREOLYSIN	coord: 5..77

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
CmoCh08G003930.1	CmoCh08G003930.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0051301	cell division