CmoCh08G003880 (gene) Cucurbita moschata (Rifu) v1

Overview


Name	CmoCh08G003880
Type	gene
Organism	Cucurbita moschata (Cucurbita moschata (Rifu) v1)
Description	Glutaredoxin family protein
Location	Cmo_Chr08: 2407467 .. 2407781 (-)
RNA-Seq Expression	CmoCh08G003880
Synteny	CmoCh08G003880

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDSpolypeptide

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGGATAAGGTTAAGAGGTTGGTTGCAGAGAGGAGTGTGGTCATATTCAGCAAGAGCTCATGCTGCCTATCCTATGCAGTTAAAATTCTATTGGGGGAACTTGGATTCAATCCTTTCGTGTATGAGATTGATCAAGACCCTGATTGCAGGGAAATAGAGAAAGCTCTCATGAGGCTTGGCTGCAGTGCACCAGTACCAGCTGTGTTCATCGGTGGAAAGCTTATTGGATCCACGAATGAAATCATGTCGCTCCACCTTAGCGGTGATCTGACCAAAATGCTGGTGCAAAGCCGTGCTTTGAACAACAAATACTAA

mRNA sequence

ATGGATAAGGTTAAGAGGTTGGTTGCAGAGAGGAGTGTGGTCATATTCAGCAAGAGCTCATGCTGCCTATCCTATGCAGTTAAAATTCTATTGGGGGAACTTGGATTCAATCCTTTCGTGTATGAGATTGATCAAGACCCTGATTGCAGGGAAATAGAGAAAGCTCTCATGAGGCTTGGCTGCAGTGCACCAGTACCAGCTGTGTTCATCGGTGGAAAGCTTATTGGATCCACGAATGAAATCATGTCGCTCCACCTTAGCGGTGATCTGACCAAAATGCTGGTGCAAAGCCGTGCTTTGAACAACAAATACTAA

Coding sequence (CDS)

ATGGATAAGGTTAAGAGGTTGGTTGCAGAGAGGAGTGTGGTCATATTCAGCAAGAGCTCATGCTGCCTATCCTATGCAGTTAAAATTCTATTGGGGGAACTTGGATTCAATCCTTTCGTGTATGAGATTGATCAAGACCCTGATTGCAGGGAAATAGAGAAAGCTCTCATGAGGCTTGGCTGCAGTGCACCAGTACCAGCTGTGTTCATCGGTGGAAAGCTTATTGGATCCACGAATGAAATCATGTCGCTCCACCTTAGCGGTGATCTGACCAAAATGCTGGTGCAAAGCCGTGCTTTGAACAACAAATACTAA

Protein sequence

MDKVKRLVAERSVVIFSKSSCCLSYAVKILLGELGFNPFVYEIDQDPDCREIEKALMRLGCSAPVPAVFIGGKLIGSTNEIMSLHLSGDLTKMLVQSRALNNKY

Homology

[Close]

BLAST of CmoCh08G003880 vs. ExPASy Swiss-Prot
Match: O04341 (Monothiol glutaredoxin-S9 OS=Arabidopsis thaliana OX=3702 GN=GRXS9 PE=1 SV=1)

HSP 1 Score: 147.9 bits (372), Expect = 6.4e-35
Identity = 67/94 (71.28%), Postives = 83/94 (88.30%), Query Frame = 0


Query: 1  MDKVKRLVAERSVVIFSKSSCCLSYAVKILLGELGFNPFVYEIDQDPDCREIEKALMRLG 60
          MDKV R+ +E+ VVIFSKSSCC+SYAV++L  +LG +P V+EID+DP+CREIEKALMRLG
Sbjct: 1  MDKVVRMSSEKGVVIFSKSSCCMSYAVQVLFQDLGVHPTVHEIDKDPECREIEKALMRLG 60

Query: 61 CSAPVPAVFIGGKLIGSTNEIMSLHLSGDLTKML 95
          CS PVPA+F+GGKLIGSTNE+MSLHLSG L  ++
Sbjct: 61 CSTPVPAIFVGGKLIGSTNEVMSLHLSGSLVPLV 94

[Close]

BLAST of CmoCh08G003880 vs. ExPASy Swiss-Prot
Match: Q9M9Y9 (Monothiol glutaredoxin-S11 OS=Arabidopsis thaliana OX=3702 GN=GRXS11 PE=3 SV=1)

HSP 1 Score: 146.0 bits (367), Expect = 2.4e-34
Identity = 66/94 (70.21%), Postives = 82/94 (87.23%), Query Frame = 0


Query: 1  MDKVKRLVAERSVVIFSKSSCCLSYAVKILLGELGFNPFVYEIDQDPDCREIEKALMRLG 60
          MDKV R+ +E+ VVIF+KSSCCLSYAV++L  +LG NP ++EID+DP+CREIEKALMRLG
Sbjct: 1  MDKVMRMSSEKGVVIFTKSSCCLSYAVQVLFQDLGVNPKIHEIDKDPECREIEKALMRLG 60

Query: 61 CSAPVPAVFIGGKLIGSTNEIMSLHLSGDLTKML 95
          CS PVPAVFIGGKL+GSTNE+MS+HLS  L  ++
Sbjct: 61 CSKPVPAVFIGGKLVGSTNEVMSMHLSSSLVPLV 94

[Close]

BLAST of CmoCh08G003880 vs. ExPASy Swiss-Prot
Match: O82255 (Glutaredoxin-C13 OS=Arabidopsis thaliana OX=3702 GN=GRXC13 PE=1 SV=1)

HSP 1 Score: 139.8 bits (351), Expect = 1.7e-32
Identity = 64/94 (68.09%), Postives = 78/94 (82.98%), Query Frame = 0


Query: 1  MDKVKRLVAERSVVIFSKSSCCLSYAVKILLGELGFNPFVYEIDQDPDCREIEKALMRLG 60
          MDKV R+ +E+ VVIF+KSSCCL YAV+IL  +L   P ++EID DPDCREIEKAL+RLG
Sbjct: 1  MDKVMRMSSEKGVVIFTKSSCCLCYAVQILFRDLRVQPTIHEIDNDPDCREIEKALLRLG 60

Query: 61 CSAPVPAVFIGGKLIGSTNEIMSLHLSGDLTKML 95
          CS  VPAVF+GGKL+GSTNE+MSLHLSG L  ++
Sbjct: 61 CSTAVPAVFVGGKLVGSTNEVMSLHLSGSLVPLI 94

[Close]

BLAST of CmoCh08G003880 vs. ExPASy Swiss-Prot
Match: Q9LYC5 (Glutaredoxin-C14 OS=Arabidopsis thaliana OX=3702 GN=GRXC14 PE=3 SV=1)

HSP 1 Score: 135.2 bits (339), Expect = 4.3e-31
Identity = 62/102 (60.78%), Postives = 81/102 (79.41%), Query Frame = 0


Query: 1   MDKVKRLVAERSVVIFSKSSCCLSYAVKILLGELGFNPFVYEIDQDPDCREIEKALMRLG 60
           MDKV R+ +E+ VVIF+KSSCCL YAV+IL  +L   P ++EID DPDCREIEKAL+RLG
Sbjct: 1   MDKVMRMSSEKGVVIFTKSSCCLCYAVQILFRDLRVQPTIHEIDNDPDCREIEKALVRLG 60

Query: 61  CSAPVPAVFIGGKLIGSTNEIMSLHLSGDLTKMLVQSRALNN 103
           C+  VPAVF+ GKL+GSTN++MSLHLSG L  ++   ++ +N
Sbjct: 61  CANAVPAVFVSGKLVGSTNDVMSLHLSGSLVPLIKPYQSFHN 102

[Close]

BLAST of CmoCh08G003880 vs. ExPASy Swiss-Prot
Match: Q8L8Z8 (Monothiol glutaredoxin-S2 OS=Arabidopsis thaliana OX=3702 GN=GRXS2 PE=3 SV=1)

HSP 1 Score: 122.1 bits (305), Expect = 3.7e-27
Identity = 58/100 (58.00%), Postives = 76/100 (76.00%), Query Frame = 0


Query: 1   MDKVKRLVAERSVVIFSKSSCCLSYAVKILLGELGFNPFVYEIDQDPDCREIEKALMRLG 60
           MD + ++V ER VVI+SKSSCC+S+ +K LL + G NP VYE+D+    REIE+AL+RLG
Sbjct: 1   MDMITKMVMERPVVIYSKSSCCMSHTIKTLLCDFGANPAVYELDEISRGREIEQALLRLG 60

Query: 61  CSAPVPAVFIGGKLIGSTNEIMSLHLSGDLTKMLVQSRAL 101
           CS  VP VFIGG+L+G  NE+MSLHL+G L  ML ++ AL
Sbjct: 61  CSPAVPGVFIGGELVGGANEVMSLHLNGSLIPMLKRAGAL 100

[Close]

BLAST of CmoCh08G003880 vs. ExPASy TrEMBL
Match: A0A6J1L0C2 (monothiol glutaredoxin-S11-like OS=Cucurbita maxima OX=3661 GN=LOC111497919 PE=3 SV=1)

HSP 1 Score: 209.1 bits (531), Expect = 8.6e-51
Identity = 104/104 (100.00%), Postives = 104/104 (100.00%), Query Frame = 0


Query: 1   MDKVKRLVAERSVVIFSKSSCCLSYAVKILLGELGFNPFVYEIDQDPDCREIEKALMRLG 60
           MDKVKRLVAERSVVIFSKSSCCLSYAVKILLGELGFNPFVYEIDQDPDCREIEKALMRLG
Sbjct: 1   MDKVKRLVAERSVVIFSKSSCCLSYAVKILLGELGFNPFVYEIDQDPDCREIEKALMRLG 60

Query: 61  CSAPVPAVFIGGKLIGSTNEIMSLHLSGDLTKMLVQSRALNNKY 105
           CSAPVPAVFIGGKLIGSTNEIMSLHLSGDLTKMLVQSRALNNKY
Sbjct: 61  CSAPVPAVFIGGKLIGSTNEIMSLHLSGDLTKMLVQSRALNNKY 104

[Close]

BLAST of CmoCh08G003880 vs. ExPASy TrEMBL
Match: A0A6J1H776 (monothiol glutaredoxin-S11-like OS=Cucurbita moschata OX=3662 GN=LOC111461113 PE=3 SV=1)

HSP 1 Score: 209.1 bits (531), Expect = 8.6e-51
Identity = 104/104 (100.00%), Postives = 104/104 (100.00%), Query Frame = 0


Query: 1   MDKVKRLVAERSVVIFSKSSCCLSYAVKILLGELGFNPFVYEIDQDPDCREIEKALMRLG 60
           MDKVKRLVAERSVVIFSKSSCCLSYAVKILLGELGFNPFVYEIDQDPDCREIEKALMRLG
Sbjct: 1   MDKVKRLVAERSVVIFSKSSCCLSYAVKILLGELGFNPFVYEIDQDPDCREIEKALMRLG 60

Query: 61  CSAPVPAVFIGGKLIGSTNEIMSLHLSGDLTKMLVQSRALNNKY 105
           CSAPVPAVFIGGKLIGSTNEIMSLHLSGDLTKMLVQSRALNNKY
Sbjct: 61  CSAPVPAVFIGGKLIGSTNEIMSLHLSGDLTKMLVQSRALNNKY 104

[Close]

BLAST of CmoCh08G003880 vs. ExPASy TrEMBL
Match: A0A6J1GRH6 (monothiol glutaredoxin-S11-like OS=Cucurbita moschata OX=3662 GN=LOC111456467 PE=3 SV=1)

HSP 1 Score: 187.6 bits (475), Expect = 2.7e-44
Identity = 93/101 (92.08%), Postives = 95/101 (94.06%), Query Frame = 0


Query: 1   MDKVKRLVAERSVVIFSKSSCCLSYAVKILLGELGFNPFVYEIDQDPDCREIEKALMRLG 60
           MDKVKRLVAERSVVIFSKSSCCLSYAV IL GELG NP VYEIDQDPDCREIEKALMRLG
Sbjct: 1   MDKVKRLVAERSVVIFSKSSCCLSYAVNILFGELGVNPLVYEIDQDPDCREIEKALMRLG 60

Query: 61  CSAPVPAVFIGGKLIGSTNEIMSLHLSGDLTKMLVQSRALN 102
           C+APVPAVFIGGKL+GSTNEIMS HLSGDLTKMLVQS ALN
Sbjct: 61  CNAPVPAVFIGGKLVGSTNEIMSHHLSGDLTKMLVQSHALN 101

[Close]

BLAST of CmoCh08G003880 vs. ExPASy TrEMBL
Match: A0A6J1JVT0 (monothiol glutaredoxin-S11-like OS=Cucurbita maxima OX=3661 GN=LOC111488794 PE=3 SV=1)

HSP 1 Score: 186.4 bits (472), Expect = 6.0e-44
Identity = 92/101 (91.09%), Postives = 95/101 (94.06%), Query Frame = 0


Query: 1   MDKVKRLVAERSVVIFSKSSCCLSYAVKILLGELGFNPFVYEIDQDPDCREIEKALMRLG 60
           MDKVKRLVAERSVVIFSKSSCCLSYAV IL GELG NP VYEIDQDPDCREIEKALMRLG
Sbjct: 1   MDKVKRLVAERSVVIFSKSSCCLSYAVNILFGELGVNPLVYEIDQDPDCREIEKALMRLG 60

Query: 61  CSAPVPAVFIGGKLIGSTNEIMSLHLSGDLTKMLVQSRALN 102
           C+APVPAVFIGGKL+GSTNEIMS HLSGDLTKMLVQ+ ALN
Sbjct: 61  CNAPVPAVFIGGKLVGSTNEIMSHHLSGDLTKMLVQNHALN 101

[Close]

BLAST of CmoCh08G003880 vs. ExPASy TrEMBL
Match: A0A6J1D901 (monothiol glutaredoxin-S11-like OS=Momordica charantia OX=3673 GN=LOC111018473 PE=3 SV=1)

HSP 1 Score: 184.1 bits (466), Expect = 3.0e-43
Identity = 90/101 (89.11%), Postives = 94/101 (93.07%), Query Frame = 0


Query: 1   MDKVKRLVAERSVVIFSKSSCCLSYAVKILLGELGFNPFVYEIDQDPDCREIEKALMRLG 60
           MDKVKR  AERSVVIFSKSSCCLSYAV IL GELG NPFVYEIDQDPDCREIEKAL++LG
Sbjct: 1   MDKVKRFAAERSVVIFSKSSCCLSYAVNILFGELGVNPFVYEIDQDPDCREIEKALVKLG 60

Query: 61  CSAPVPAVFIGGKLIGSTNEIMSLHLSGDLTKMLVQSRALN 102
           C+APVPAVFIGGKL+GSTNEIMS HLSGDLTKMLVQS ALN
Sbjct: 61  CNAPVPAVFIGGKLVGSTNEIMSHHLSGDLTKMLVQSHALN 101

[Close]

BLAST of CmoCh08G003880 vs. NCBI nr
Match: XP_022960365.1 (monothiol glutaredoxin-S11-like [Cucurbita moschata] >XP_022960366.1 monothiol glutaredoxin-S11-like [Cucurbita moschata] >XP_022960367.1 monothiol glutaredoxin-S11-like [Cucurbita moschata] >XP_023004702.1 monothiol glutaredoxin-S11-like [Cucurbita maxima] >XP_023004703.1 monothiol glutaredoxin-S11-like [Cucurbita maxima] >XP_023514727.1 monothiol glutaredoxin-S11-like [Cucurbita pepo subsp. pepo] >XP_023514728.1 monothiol glutaredoxin-S11-like [Cucurbita pepo subsp. pepo] >XP_023514729.1 monothiol glutaredoxin-S11-like [Cucurbita pepo subsp. pepo] >KAG6593164.1 Monothiol glutaredoxin-S9, partial [Cucurbita argyrosperma subsp. sororia])

HSP 1 Score: 209.1 bits (531), Expect = 1.8e-50
Identity = 104/104 (100.00%), Postives = 104/104 (100.00%), Query Frame = 0


Query: 1   MDKVKRLVAERSVVIFSKSSCCLSYAVKILLGELGFNPFVYEIDQDPDCREIEKALMRLG 60
           MDKVKRLVAERSVVIFSKSSCCLSYAVKILLGELGFNPFVYEIDQDPDCREIEKALMRLG
Sbjct: 1   MDKVKRLVAERSVVIFSKSSCCLSYAVKILLGELGFNPFVYEIDQDPDCREIEKALMRLG 60

Query: 61  CSAPVPAVFIGGKLIGSTNEIMSLHLSGDLTKMLVQSRALNNKY 105
           CSAPVPAVFIGGKLIGSTNEIMSLHLSGDLTKMLVQSRALNNKY
Sbjct: 61  CSAPVPAVFIGGKLIGSTNEIMSLHLSGDLTKMLVQSRALNNKY 104

[Close]

BLAST of CmoCh08G003880 vs. NCBI nr
Match: XP_022954100.1 (monothiol glutaredoxin-S11-like [Cucurbita moschata] >XP_023549072.1 monothiol glutaredoxin-S11-like [Cucurbita pepo subsp. pepo] >KAG6575857.1 Monothiol glutaredoxin-S11, partial [Cucurbita argyrosperma subsp. sororia])

HSP 1 Score: 187.6 bits (475), Expect = 5.5e-44
Identity = 93/101 (92.08%), Postives = 95/101 (94.06%), Query Frame = 0


Query: 1   MDKVKRLVAERSVVIFSKSSCCLSYAVKILLGELGFNPFVYEIDQDPDCREIEKALMRLG 60
           MDKVKRLVAERSVVIFSKSSCCLSYAV IL GELG NP VYEIDQDPDCREIEKALMRLG
Sbjct: 1   MDKVKRLVAERSVVIFSKSSCCLSYAVNILFGELGVNPLVYEIDQDPDCREIEKALMRLG 60

Query: 61  CSAPVPAVFIGGKLIGSTNEIMSLHLSGDLTKMLVQSRALN 102
           C+APVPAVFIGGKL+GSTNEIMS HLSGDLTKMLVQS ALN
Sbjct: 61  CNAPVPAVFIGGKLVGSTNEIMSHHLSGDLTKMLVQSHALN 101

[Close]

BLAST of CmoCh08G003880 vs. NCBI nr
Match: XP_022992475.1 (monothiol glutaredoxin-S11-like [Cucurbita maxima])

HSP 1 Score: 186.4 bits (472), Expect = 1.2e-43
Identity = 92/101 (91.09%), Postives = 95/101 (94.06%), Query Frame = 0


Query: 1   MDKVKRLVAERSVVIFSKSSCCLSYAVKILLGELGFNPFVYEIDQDPDCREIEKALMRLG 60
           MDKVKRLVAERSVVIFSKSSCCLSYAV IL GELG NP VYEIDQDPDCREIEKALMRLG
Sbjct: 1   MDKVKRLVAERSVVIFSKSSCCLSYAVNILFGELGVNPLVYEIDQDPDCREIEKALMRLG 60

Query: 61  CSAPVPAVFIGGKLIGSTNEIMSLHLSGDLTKMLVQSRALN 102
           C+APVPAVFIGGKL+GSTNEIMS HLSGDLTKMLVQ+ ALN
Sbjct: 61  CNAPVPAVFIGGKLVGSTNEIMSHHLSGDLTKMLVQNHALN 101

[Close]

BLAST of CmoCh08G003880 vs. NCBI nr
Match: XP_038876718.1 (monothiol glutaredoxin-S11-like [Benincasa hispida])

HSP 1 Score: 185.7 bits (470), Expect = 2.1e-43
Identity = 93/101 (92.08%), Postives = 95/101 (94.06%), Query Frame = 0


Query: 1   MDKVKRLVAERSVVIFSKSSCCLSYAVKILLGELGFNPFVYEIDQDPDCREIEKALMRLG 60
           MDKVKRLVAERSVVIFSKSSCCLSYAV IL GELG NPFVYEIDQDPD REIEKALMRLG
Sbjct: 1   MDKVKRLVAERSVVIFSKSSCCLSYAVNILFGELGVNPFVYEIDQDPDYREIEKALMRLG 60

Query: 61  CSAPVPAVFIGGKLIGSTNEIMSLHLSGDLTKMLVQSRALN 102
           C+APVPAVFIGGKL+GSTNEIMS HLSGDLTKMLVQS ALN
Sbjct: 61  CNAPVPAVFIGGKLVGSTNEIMSHHLSGDLTKMLVQSHALN 101

[Close]

BLAST of CmoCh08G003880 vs. NCBI nr
Match: XP_022150267.1 (monothiol glutaredoxin-S11-like [Momordica charantia] >XP_022150268.1 monothiol glutaredoxin-S11-like [Momordica charantia])

HSP 1 Score: 184.1 bits (466), Expect = 6.1e-43
Identity = 90/101 (89.11%), Postives = 94/101 (93.07%), Query Frame = 0


Query: 1   MDKVKRLVAERSVVIFSKSSCCLSYAVKILLGELGFNPFVYEIDQDPDCREIEKALMRLG 60
           MDKVKR  AERSVVIFSKSSCCLSYAV IL GELG NPFVYEIDQDPDCREIEKAL++LG
Sbjct: 1   MDKVKRFAAERSVVIFSKSSCCLSYAVNILFGELGVNPFVYEIDQDPDCREIEKALVKLG 60

Query: 61  CSAPVPAVFIGGKLIGSTNEIMSLHLSGDLTKMLVQSRALN 102
           C+APVPAVFIGGKL+GSTNEIMS HLSGDLTKMLVQS ALN
Sbjct: 61  CNAPVPAVFIGGKLVGSTNEIMSHHLSGDLTKMLVQSHALN 101

[Close]

BLAST of CmoCh08G003880 vs. TAIR 10
Match: AT2G30540.1 (Thioredoxin superfamily protein )

HSP 1 Score: 147.9 bits (372), Expect = 4.5e-36
Identity = 67/94 (71.28%), Postives = 83/94 (88.30%), Query Frame = 0


Query: 1  MDKVKRLVAERSVVIFSKSSCCLSYAVKILLGELGFNPFVYEIDQDPDCREIEKALMRLG 60
          MDKV R+ +E+ VVIFSKSSCC+SYAV++L  +LG +P V+EID+DP+CREIEKALMRLG
Sbjct: 1  MDKVVRMSSEKGVVIFSKSSCCMSYAVQVLFQDLGVHPTVHEIDKDPECREIEKALMRLG 60

Query: 61 CSAPVPAVFIGGKLIGSTNEIMSLHLSGDLTKML 95
          CS PVPA+F+GGKLIGSTNE+MSLHLSG L  ++
Sbjct: 61 CSTPVPAIFVGGKLIGSTNEVMSLHLSGSLVPLV 94

[Close]

BLAST of CmoCh08G003880 vs. TAIR 10
Match: AT1G06830.1 (Glutaredoxin family protein )

HSP 1 Score: 146.0 bits (367), Expect = 1.7e-35
Identity = 66/94 (70.21%), Postives = 82/94 (87.23%), Query Frame = 0


Query: 1  MDKVKRLVAERSVVIFSKSSCCLSYAVKILLGELGFNPFVYEIDQDPDCREIEKALMRLG 60
          MDKV R+ +E+ VVIF+KSSCCLSYAV++L  +LG NP ++EID+DP+CREIEKALMRLG
Sbjct: 1  MDKVMRMSSEKGVVIFTKSSCCLSYAVQVLFQDLGVNPKIHEIDKDPECREIEKALMRLG 60

Query: 61 CSAPVPAVFIGGKLIGSTNEIMSLHLSGDLTKML 95
          CS PVPAVFIGGKL+GSTNE+MS+HLS  L  ++
Sbjct: 61 CSKPVPAVFIGGKLVGSTNEVMSMHLSSSLVPLV 94

[Close]

BLAST of CmoCh08G003880 vs. TAIR 10
Match: AT2G47880.1 (Glutaredoxin family protein )

HSP 1 Score: 139.8 bits (351), Expect = 1.2e-33
Identity = 64/94 (68.09%), Postives = 78/94 (82.98%), Query Frame = 0


Query: 1  MDKVKRLVAERSVVIFSKSSCCLSYAVKILLGELGFNPFVYEIDQDPDCREIEKALMRLG 60
          MDKV R+ +E+ VVIF+KSSCCL YAV+IL  +L   P ++EID DPDCREIEKAL+RLG
Sbjct: 1  MDKVMRMSSEKGVVIFTKSSCCLCYAVQILFRDLRVQPTIHEIDNDPDCREIEKALLRLG 60

Query: 61 CSAPVPAVFIGGKLIGSTNEIMSLHLSGDLTKML 95
          CS  VPAVF+GGKL+GSTNE+MSLHLSG L  ++
Sbjct: 61 CSTAVPAVFVGGKLVGSTNEVMSLHLSGSLVPLI 94

[Close]

BLAST of CmoCh08G003880 vs. TAIR 10
Match: AT3G62960.1 (Thioredoxin superfamily protein )

HSP 1 Score: 135.2 bits (339), Expect = 3.0e-32
Identity = 62/102 (60.78%), Postives = 81/102 (79.41%), Query Frame = 0


Query: 1   MDKVKRLVAERSVVIFSKSSCCLSYAVKILLGELGFNPFVYEIDQDPDCREIEKALMRLG 60
           MDKV R+ +E+ VVIF+KSSCCL YAV+IL  +L   P ++EID DPDCREIEKAL+RLG
Sbjct: 1   MDKVMRMSSEKGVVIFTKSSCCLCYAVQILFRDLRVQPTIHEIDNDPDCREIEKALVRLG 60

Query: 61  CSAPVPAVFIGGKLIGSTNEIMSLHLSGDLTKMLVQSRALNN 103
           C+  VPAVF+ GKL+GSTN++MSLHLSG L  ++   ++ +N
Sbjct: 61  CANAVPAVFVSGKLVGSTNDVMSLHLSGSLVPLIKPYQSFHN 102

[Close]

BLAST of CmoCh08G003880 vs. TAIR 10
Match: AT5G18600.1 (Thioredoxin superfamily protein )

HSP 1 Score: 122.1 bits (305), Expect = 2.7e-28
Identity = 58/100 (58.00%), Postives = 76/100 (76.00%), Query Frame = 0


Query: 1   MDKVKRLVAERSVVIFSKSSCCLSYAVKILLGELGFNPFVYEIDQDPDCREIEKALMRLG 60
           MD + ++V ER VVI+SKSSCC+S+ +K LL + G NP VYE+D+    REIE+AL+RLG
Sbjct: 1   MDMITKMVMERPVVIYSKSSCCMSHTIKTLLCDFGANPAVYELDEISRGREIEQALLRLG 60

Query: 61  CSAPVPAVFIGGKLIGSTNEIMSLHLSGDLTKMLVQSRAL 101
           CS  VP VFIGG+L+G  NE+MSLHL+G L  ML ++ AL
Sbjct: 61  CSPAVPGVFIGGELVGGANEVMSLHLNGSLIPMLKRAGAL 100

The following BLAST results are available for this feature:

BLAST of CmoCh08G003880 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
O04341	6.4e-35	71.28	Monothiol glutaredoxin-S9 OS=Arabidopsis thaliana OX=3702 GN=GRXS9 PE=1 SV=1	[more]
Q9M9Y9	2.4e-34	70.21	Monothiol glutaredoxin-S11 OS=Arabidopsis thaliana OX=3702 GN=GRXS11 PE=3 SV=1	[more]
O82255	1.7e-32	68.09	Glutaredoxin-C13 OS=Arabidopsis thaliana OX=3702 GN=GRXC13 PE=1 SV=1	[more]
Q9LYC5	4.3e-31	60.78	Glutaredoxin-C14 OS=Arabidopsis thaliana OX=3702 GN=GRXC14 PE=3 SV=1	[more]
Q8L8Z8	3.7e-27	58.00	Monothiol glutaredoxin-S2 OS=Arabidopsis thaliana OX=3702 GN=GRXS2 PE=3 SV=1	[more]

BLAST of CmoCh08G003880 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A6J1L0C2	8.6e-51	100.00	monothiol glutaredoxin-S11-like OS=Cucurbita maxima OX=3661 GN=LOC111497919 PE=3...	[more]
A0A6J1H776	8.6e-51	100.00	monothiol glutaredoxin-S11-like OS=Cucurbita moschata OX=3662 GN=LOC111461113 PE...	[more]
A0A6J1GRH6	2.7e-44	92.08	monothiol glutaredoxin-S11-like OS=Cucurbita moschata OX=3662 GN=LOC111456467 PE...	[more]
A0A6J1JVT0	6.0e-44	91.09	monothiol glutaredoxin-S11-like OS=Cucurbita maxima OX=3661 GN=LOC111488794 PE=3...	[more]
A0A6J1D901	3.0e-43	89.11	monothiol glutaredoxin-S11-like OS=Momordica charantia OX=3673 GN=LOC111018473 P...	[more]

BLAST of CmoCh08G003880 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_022960365.1	1.8e-50	100.00	monothiol glutaredoxin-S11-like [Cucurbita moschata] >XP_022960366.1 monothiol g...	[more]
XP_022954100.1	5.5e-44	92.08	monothiol glutaredoxin-S11-like [Cucurbita moschata] >XP_023549072.1 monothiol g...	[more]
XP_022992475.1	1.2e-43	91.09	monothiol glutaredoxin-S11-like [Cucurbita maxima]	[more]
XP_038876718.1	2.1e-43	92.08	monothiol glutaredoxin-S11-like [Benincasa hispida]	[more]
XP_022150267.1	6.1e-43	89.11	monothiol glutaredoxin-S11-like [Momordica charantia] >XP_022150268.1 monothiol ...	[more]

BLAST of CmoCh08G003880 vs. TAIR 10


Match Name	E-value	Identity	Description
AT2G30540.1	4.5e-36	71.28	Thioredoxin superfamily protein	[more]
AT1G06830.1	1.7e-35	70.21	Glutaredoxin family protein	[more]
AT2G47880.1	1.2e-33	68.09	Glutaredoxin family protein	[more]
AT3G62960.1	3.0e-32	60.78	Thioredoxin superfamily protein	[more]
AT5G18600.1	2.7e-28	58.00	Thioredoxin superfamily protein	[more]

InterPro

Analysis Name: InterPro Annotations of Cucurbita moschata (Rifu) v1
Date Performed: 2021-10-25


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR014025	Glutaredoxin subgroup	PRINTS	PR00160	GLUTAREDOXIN	coord: 13..31 score: 37.94 coord: 58..71 score: 34.52 coord: 72..85 score: 28.27
IPR002109	Glutaredoxin	PFAM	PF00462	Glutaredoxin	coord: 13..75 e-value: 1.2E-11 score: 44.6
IPR011905	Glutaredoxin-like, plant II	TIGRFAM	TIGR02189	TIGR02189	coord: 4..100 e-value: 1.9E-40 score: 134.8
IPR011905	Glutaredoxin-like, plant II	PANTHER	PTHR10168	GLUTAREDOXIN	coord: 1..96
None	No IPR available	GENE3D	3.40.30.10	Glutaredoxin	coord: 1..103 e-value: 1.1E-26 score: 94.6
None	No IPR available	PANTHER	PTHR10168:SF275	BNAA10G27940D PROTEIN	coord: 1..96
None	No IPR available	PROSITE	PS51354	GLUTAREDOXIN_2	coord: 1..101 score: 20.621628
None	No IPR available	CDD	cd03419	GRX_GRXh_1_2_like	coord: 13..93 e-value: 3.30868E-34 score: 111.092
IPR036249	Thioredoxin-like superfamily	SUPERFAMILY	52833	Thioredoxin-like	coord: 1..96

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
CmoCh08G003880.1	CmoCh08G003880.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
cellular_component	GO:0005737	cytoplasm
cellular_component	GO:0005634	nucleus
molecular_function	GO:0097573	glutathione oxidoreductase activity