CmoCh08G003580 (gene) Cucurbita moschata (Rifu) v1

Overview


Name	CmoCh08G003580
Type	gene
Organism	Cucurbita moschata (Cucurbita moschata (Rifu) v1)
Description	HMA domain-containing protein
Location	Cmo_Chr08: 2223513 .. 2225221 (-)
RNA-Seq Expression	CmoCh08G003580
Synteny	CmoCh08G003580

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: polypeptideexonCDS

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGGAAACCAGCCACGCTCCCAGTGATCGAGTATGATAATAATGTTCTTCCTTTTTATTGTTAATTTATTTTTTTATTTTTTTATTTTATTTTGATGATATGGTTCATGTTTTTGTGTAGACTTATGTTCTCAGAGTGAATCTCAAGTGTTGCAACGCATGCCCCAACAGAGTCAAGAACAACCTTCTCAGACTTCCAGGTAATGCCCATATAGCCTCACTCATTATTTTCAATTTCCATGATTTTTTTTGTTTCTTTTATGTTACTTCATTTGTATAAATATTTTTAAAATTAAGTAAATTAAAAAAGTATCTTTTCAATTTTGGAACATTCAGATCGTGAACAAAAAAAAGATAAAACATGTGGGATCTCACTTCGGTTGAGTAATAGAGAGGATTTGGGCCTTGAAGGGACGTGGATGGTTAGATCCCACATTGGTTGAGTGTGAGGGAAGACGTTGGCCCAGAAGGGGTGTAGATTGTGAGATCCCGCATCAGTTGAGTGCCAACAAGTACGCTGGCCCCAAAAGGGGTGTGGATTGTGAGATCCCACATCAGTTGAGTGTCAATGAGGACGTTGGCCCCAAAGGGGGTGGGGGGTGAGATTCCACATCGTTTGAGTGCCGGACAGGACAATGGACCCCAAAGGGTGGTGGAGTGTGAGATCCTACATCGGTTGAGTACCAACGAGTACGCTAGCCCAAAATGAGTGTAGATTGTGAGATCCCACATCGGTTGAGTGCTAGCGAGGACGTTGGGCCCCATAGGAGGGAGTGGATTACGAGATCCCACATCGATTGAGTGCCAACAAGAACATTGGCTCTAAAGGGGTGGAGTGTGAGATCCCACATCAATTGAATGTCAGCGAGGATAATGGGCTCAAACAGAGGTGAAGCCTAAGATTCCACGTAGGTCAGAGAGGATAATGACGTTTCAAAAAATTTTGAGGGAAAGGTCTAAAGAAAAAATCCAAAATTTTTTTTATTAAAAAGTGAAATTTATTGAAAGAAAAAGTAGATATAAACAAAATTATAAAAGATTGAGAAACAAAATTTGTTAAAACATTTATAATTTATTAATGTTTTTGTCTGTTTGTGTTTTGTTGTAATGGCGGCCAATGAAGATGTCAAATCCGTAGCCATTGATATACAAAAAGGATTGGTAACTATCACTGCAAATTACACCTTTGATCCATTAACCATCGTACGTGCAATGTCAAGAACTGGTAAGCTAGCACGATTACAACCCATGGGATATGTGGCGCCGGCGCCGGTGGCCTCCGCCGCTTTCAGAGATTCCGTTCATCAGAATATTCCTTCTGCTGCTTCAGATCCTCACTGTAACAAAATTGATTGGACCCAGAACTGCGTTCCTGGCTCCAGCAAGGTTCATTTCAACGAGGCGGCCGGCGCCGTTCCGCCGGTGGATGTGCCGTACCGCCACCGGCTGTCACTTCGGCCGGGGTCGCAATTTGGAGGTGTGGGTCATGATGCAAGCCGTGGGTTTGGGCGTCCAATGATGGAGCCGTTGCCACAGCCTCTGCCGCCAGCCATGCCGCCCGCCATGCCACCAGGGAACGGATATTATCGATGGTCTGAGCCGCCGCCTTATTATTGGCAGCAGCAACCGCCCCCCGCTCCTGCGGTTGCTGCTGCACCGGGCCACTACTTGTTCAATGATGAGAATGTAGACGCGTGCAAGATCATTTAG

mRNA sequence

ATGGAAACCAGCCACGCTCCCAGTGATCGAACTTATGTTCTCAGAGTGAATCTCAAGTGTTGCAACGCATGCCCCAACAGAGTCAAGAACAACCTTCTCAGACTTCCAGATGTCAAATCCGTAGCCATTGATATACAAAAAGGATTGGTAACTATCACTGCAAATTACACCTTTGATCCATTAACCATCGTACGTGCAATGTCAAGAACTGGTAAGCTAGCACGATTACAACCCATGGGATATGTGGCGCCGGCGCCGGTGGCCTCCGCCGCTTTCAGAGATTCCGTTCATCAGAATATTCCTTCTGCTGCTTCAGATCCTCACTGTAACAAAATTGATTGGACCCAGAACTGCGTTCCTGGCTCCAGCAAGGTTCATTTCAACGAGGCGGCCGGCGCCGTTCCGCCGGTGGATGTGCCGTACCGCCACCGGCTGTCACTTCGGCCGGGGTCGCAATTTGGAGGTGTGGGTCATGATGCAAGCCGTGGGTTTGGGCGTCCAATGATGGAGCCGTTGCCACAGCCTCTGCCGCCAGCCATGCCGCCCGCCATGCCACCAGGGAACGGATATTATCGATGGTCTGAGCCGCCGCCTTATTATTGGCAGCAGCAACCGCCCCCCGCTCCTGCGGTTGCTGCTGCACCGGGCCACTACTTGTTCAATGATGAGAATGTAGACGCGTGCAAGATCATTTAG

Coding sequence (CDS)

ATGGAAACCAGCCACGCTCCCAGTGATCGAACTTATGTTCTCAGAGTGAATCTCAAGTGTTGCAACGCATGCCCCAACAGAGTCAAGAACAACCTTCTCAGACTTCCAGATGTCAAATCCGTAGCCATTGATATACAAAAAGGATTGGTAACTATCACTGCAAATTACACCTTTGATCCATTAACCATCGTACGTGCAATGTCAAGAACTGGTAAGCTAGCACGATTACAACCCATGGGATATGTGGCGCCGGCGCCGGTGGCCTCCGCCGCTTTCAGAGATTCCGTTCATCAGAATATTCCTTCTGCTGCTTCAGATCCTCACTGTAACAAAATTGATTGGACCCAGAACTGCGTTCCTGGCTCCAGCAAGGTTCATTTCAACGAGGCGGCCGGCGCCGTTCCGCCGGTGGATGTGCCGTACCGCCACCGGCTGTCACTTCGGCCGGGGTCGCAATTTGGAGGTGTGGGTCATGATGCAAGCCGTGGGTTTGGGCGTCCAATGATGGAGCCGTTGCCACAGCCTCTGCCGCCAGCCATGCCGCCCGCCATGCCACCAGGGAACGGATATTATCGATGGTCTGAGCCGCCGCCTTATTATTGGCAGCAGCAACCGCCCCCCGCTCCTGCGGTTGCTGCTGCACCGGGCCACTACTTGTTCAATGATGAGAATGTAGACGCGTGCAAGATCATTTAG

Protein sequence

METSHAPSDRTYVLRVNLKCCNACPNRVKNNLLRLPDVKSVAIDIQKGLVTITANYTFDPLTIVRAMSRTGKLARLQPMGYVAPAPVASAAFRDSVHQNIPSAASDPHCNKIDWTQNCVPGSSKVHFNEAAGAVPPVDVPYRHRLSLRPGSQFGGVGHDASRGFGRPMMEPLPQPLPPAMPPAMPPGNGYYRWSEPPPYYWQQQPPPAPAVAAAPGHYLFNDENVDACKII

Homology

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BLAST of CmoCh08G003580 vs. ExPASy Swiss-Prot
Match: Q0WV37 (Heavy metal-associated isoprenylated plant protein 34 OS=Arabidopsis thaliana OX=3702 GN=HIPP34 PE=2 SV=1)

HSP 1 Score: 50.1 bits (118), Expect = 4.0e-05
Identity = 26/67 (38.81%), Postives = 43/67 (64.18%), Query Frame = 0


Query: 10 RTYVLRVNLKCCNACPNRVKNNLLRLPDVKSVAIDIQKGLVTITANYTFDPLTIVRAMSR 69
          +T VL+VN+  C  C ++VK  L ++  V SV  D+++G VT+T N   DP  +V+ +S+
Sbjct: 10 QTCVLKVNVH-CEGCKHKVKKQLQKIEGVYSVKADVEQGRVTVTGN--IDPALLVKKLSK 69

Query: 70 TGKLARL 77
          +GK A +
Sbjct: 70 SGKHAEI 73

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BLAST of CmoCh08G003580 vs. ExPASy TrEMBL
Match: A0A5A7UTY4 (Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold497G00730 PE=4 SV=1)

HSP 1 Score: 116.3 bits (290), Expect = 1.7e-22
Identity = 89/239 (37.24%), Postives = 110/239 (46.03%), Query Frame = 0


Query: 38  VKSVAIDIQKGLVTITANYTFDPLTIVRAMSRTGKLARLQPMGYVAPAPV---------- 97
           V SV ++IQ GLV I+    FDP   V+ +++TGK A+       APAP           
Sbjct: 7   VTSVEMNIQTGLVKISGESNFDPSIFVKTIAKTGKKAQFPATENSAPAPTPTATPIGQNP 66

Query: 98  ----------ASAAFRDSVH----QNIPSAASDPHCNKIDWTQ---NCVPG--------S 157
                     A AA  D+      +N  S  S+ HC K + T    N   G        S
Sbjct: 67  QFPTRENMTSAPAATSDNASGHHVRNKNSINSNNHCCKSERTTHYGNSDAGNFSDHRSRS 126

Query: 158 SKVHFNEAAGAVPPVDVPYRHRLSLR---------PGSQFGGVGHDASRGFGRPMMEPLP 217
            KVH NEAA   PPV +P  +R+ +R         P  Q+G +    S GF   M EP  
Sbjct: 127 DKVHINEAAAVNPPVPLPLPNRMFMRPPMSSPRLPPPPQYGDMSFRGSHGFWPGMSEPWS 186

Query: 218 QPLPPAMP-PAMPPGNGYYRWSEPPPYYWQQQPPPAPAVAAAPGHYLFNDENVDACKII 232
              PP  P  AM P + YYRW EP PYY Q+Q PP   V   P HYLFNDEN + C II
Sbjct: 187 SASPPPPPMTAMAPPHSYYRWPEPVPYYLQEQQPP---VGNTPSHYLFNDENTEGCVII 242

[Close]

BLAST of CmoCh08G003580 vs. ExPASy TrEMBL
Match: A0A0A0K5U2 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_7G392360 PE=4 SV=1)

HSP 1 Score: 107.1 bits (266), Expect = 1.0e-19
Identity = 80/234 (34.19%), Postives = 107/234 (45.73%), Query Frame = 0


Query: 38  VKSVAIDIQKGLVTITANYTFDPLTIVRAMSRTGKLARLQPM------------------ 97
           V SV ++I+ GLV I+    FDP   ++ +++ GK A+   M                  
Sbjct: 7   VTSVEMNIETGLVKISGEKNFDPFIFLKTITKAGKKAQFPAMQNTAAPSPIAQNPQFPTK 66

Query: 98  ----GYVAPAPVASAAFRDSVH--QNIPSAASDPHCNKIDWTQNCVPGS------SKVHF 157
                  APAP A+++   S H   +  S  S+ HC K D   +    S       KVH 
Sbjct: 67  ENMTSAPAPAPAATSSDNASGHPIHHSHSINSNNHCCKSDGNSDAGNFSDHRSWPDKVHI 126

Query: 158 NEAAGAVPPVDVPYRHRLSLR---------PGSQFGG-VGHDASRGFGRPMMEPLPQPLP 217
           NEAA   PPV +P  +R+ +R         P  Q+G  +G   S GF   M EP   P  
Sbjct: 127 NEAASVNPPVALPLHNRMLMRPPMPSLRPPPPPQYGDHMGFRGSHGFWPGMSEPWSSPSH 186

Query: 218 PAMPPAMPPGNGYYRWSEPPPYYWQQQPPPAPAVAAAPGHYLFNDENVDACKII 232
           P      PP + YYRW EP PYY Q+Q PP   V   P HY+FNDEN + C I+
Sbjct: 187 P------PPPHSYYRWPEPVPYYLQEQQPP---VGNTPNHYVFNDENTEGCIIV 231

[Close]

BLAST of CmoCh08G003580 vs. ExPASy TrEMBL
Match: A0A5D3DBX5 (Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold328G00250 PE=4 SV=1)

HSP 1 Score: 94.4 bits (233), Expect = 6.8e-16
Identity = 68/169 (40.24%), Postives = 82/169 (48.52%), Query Frame = 0


Query: 85  APVASAAFRDSVH-QNIPSAASDPHCNKIDWTQ---NCVPG--------SSKVHFNEAAG 144
           AP A++      H +N  S  S+ HC K + T    N   G        S KVH NEAA 
Sbjct: 4   APAATSDNASGHHVRNKNSINSNNHCCKSERTTHYGNSDAGNFSDHRSRSDKVHINEAAA 63

Query: 145 AVPPVDVPYRHRLSLR---------PGSQFGGVGHDASRGFGRPMMEPLPQPLPPAMP-P 204
             PPV +P  +R+ +R         P  Q+G +    S GF   M EP     PP  P  
Sbjct: 64  VNPPVPLPLPNRMFMRPPMSSPRLPPPPQYGDMSFRGSHGFWPGMSEPWSSASPPPPPMT 123

Query: 205 AMPPGNGYYRWSEPPPYYWQQQPPPAPAVAAAPGHYLFNDENVDACKII 232
           AM P + YYRW EP PYY Q+Q PP   V   P HYLFNDEN + C II
Sbjct: 124 AMAPPHSYYRWPEPVPYYLQEQQPP---VGNTPSHYLFNDENTEGCVII 169

[Close]

BLAST of CmoCh08G003580 vs. ExPASy TrEMBL
Match: A0A6J1D7U6 (heavy metal-associated isoprenylated plant protein 42-like OS=Momordica charantia OX=3673 GN=LOC111018432 PE=4 SV=1)

HSP 1 Score: 72.4 bits (176), Expect = 2.8e-09
Identity = 69/221 (31.22%), Postives = 94/221 (42.53%), Query Frame = 0


Query: 1   METSHAPSDRTYVLRVNLKCCNACPNRVKNNLLRLPDVKSVAIDIQKGLVTITANYTFDP 60
           ME   A  D  YVLRVN++CCN CP ++   LLR+  VKSVAID  KGLVT++ +   DP
Sbjct: 1   MENGKASIDANYVLRVNIQCCNECPRKITRRLLRVSGVKSVAIDQDKGLVTVSGD--IDP 60

Query: 61  LTIVRAMSRTGKLARLQPMGYVAPAPVASAAFRDSVHQNIPSAASDPHCNKIDW--TQNC 120
           + +++ + + GK A+L    +    P    +   S          D    + DW     C
Sbjct: 61  VLLLQKIKKMGKEAKL---WFFQQGPGPDCSTEQSKRAESDRNNEDAK-QQFDWHFQHKC 120

Query: 121 VPGSSKVHFNEAAGAVPPVDVPYRHRLSLRPGSQFGGVGHDASRGFGRPMMEPLPQPLPP 180
           VP        E      P   P    L   P +  G     +    G     P  QP+P 
Sbjct: 121 VP--------ETMAMKEPGWGP--RSLPAMPSNVHGYSYSQSIPRLGYRPTWPYQQPVP- 180

Query: 181 AMPPAMPPGNGYYRWSEPP--------PYYWQQQPPPAPAV 212
                + P +GYY  S+PP        PY+  Q PP A  V
Sbjct: 181 --SHRLIPPHGYY--SQPPLPPPLPAYPYFQPQSPPQANPV 200

[Close]

BLAST of CmoCh08G003580 vs. ExPASy TrEMBL
Match: A0A022PZY8 (HMA domain-containing protein OS=Erythranthe guttata OX=4155 GN=MIMGU_mgv11b018162mg PE=4 SV=1)

HSP 1 Score: 67.4 bits (163), Expect = 9.0e-08
Identity = 34/72 (47.22%), Postives = 46/72 (63.89%), Query Frame = 0


Query: 7   PSDRTYVLRVNLKCCNACPNRVKNNLLRLPDVKSVAIDIQKGLVTITANYTFDPLTIVRA 66
           P + T VL ++L CC  CPN ++N LLR+P V SV+ID +KGLV +T     DP T++  
Sbjct: 44  PPNHTKVLSIDLTCCGKCPNILENILLRMPGVDSVSIDTEKGLVFVTGK--IDPTTLLDR 103

Query: 67  MSRTGKLARLQP 79
           +S  GK  RL P
Sbjct: 104 VSNLGKEVRLLP 113

[Close]

BLAST of CmoCh08G003580 vs. NCBI nr
Match: KAG6593135.1 (hypothetical protein SDJN03_12611, partial [Cucurbita argyrosperma subsp. sororia])

HSP 1 Score: 391.7 bits (1005), Expect = 4.3e-105
Identity = 190/199 (95.48%), Postives = 191/199 (95.98%), Query Frame = 0


Query: 37  DVKSVAIDIQKGLVTITANYTFDPLTIVRAMSRTGKLARLQPMGYVAPAPVASAAFRDSV 96
           DVKSVAIDIQKGLVTITANYTFDPLTIVRAMSRTGKLARLQPMGY APAP ASAA RDSV
Sbjct: 6   DVKSVAIDIQKGLVTITANYTFDPLTIVRAMSRTGKLARLQPMGYAAPAPAASAAVRDSV 65

Query: 97  HQNIPSAASDPHCNKIDWTQNCVPGSSKVHFNEAAGAVPPVDVPYRHRLSLRPGSQFGGV 156
           H NIPSAASDPHCNKIDWTQNCVPGSSKVHFNEAAGAVPPVDVPYRHRLSLRPGSQFGGV
Sbjct: 66  HPNIPSAASDPHCNKIDWTQNCVPGSSKVHFNEAAGAVPPVDVPYRHRLSLRPGSQFGGV 125

Query: 157 GHDASRGFGRPMMEPLPQPL----PPAMPPAMPPGNGYYRWSEPPPYYWQQQPPPAPAVA 216
           GHDASRGFGRPMMEPLPQPL    PPAMPPAMPPG+GYYRWSEPPPYYWQQQPPPAPAVA
Sbjct: 126 GHDASRGFGRPMMEPLPQPLPPAMPPAMPPAMPPGDGYYRWSEPPPYYWQQQPPPAPAVA 185

Query: 217 AAPGHYLFNDENVDACKII 232
           AAPGHYLFNDENVDACKII
Sbjct: 186 AAPGHYLFNDENVDACKII 204

[Close]

BLAST of CmoCh08G003580 vs. NCBI nr
Match: KAA0057596.1 (hypothetical protein E6C27_scaffold497G00730 [Cucumis melo var. makuwa])

HSP 1 Score: 116.3 bits (290), Expect = 3.5e-22
Identity = 89/239 (37.24%), Postives = 110/239 (46.03%), Query Frame = 0


Query: 38  VKSVAIDIQKGLVTITANYTFDPLTIVRAMSRTGKLARLQPMGYVAPAPV---------- 97
           V SV ++IQ GLV I+    FDP   V+ +++TGK A+       APAP           
Sbjct: 7   VTSVEMNIQTGLVKISGESNFDPSIFVKTIAKTGKKAQFPATENSAPAPTPTATPIGQNP 66

Query: 98  ----------ASAAFRDSVH----QNIPSAASDPHCNKIDWTQ---NCVPG--------S 157
                     A AA  D+      +N  S  S+ HC K + T    N   G        S
Sbjct: 67  QFPTRENMTSAPAATSDNASGHHVRNKNSINSNNHCCKSERTTHYGNSDAGNFSDHRSRS 126

Query: 158 SKVHFNEAAGAVPPVDVPYRHRLSLR---------PGSQFGGVGHDASRGFGRPMMEPLP 217
            KVH NEAA   PPV +P  +R+ +R         P  Q+G +    S GF   M EP  
Sbjct: 127 DKVHINEAAAVNPPVPLPLPNRMFMRPPMSSPRLPPPPQYGDMSFRGSHGFWPGMSEPWS 186

Query: 218 QPLPPAMP-PAMPPGNGYYRWSEPPPYYWQQQPPPAPAVAAAPGHYLFNDENVDACKII 232
              PP  P  AM P + YYRW EP PYY Q+Q PP   V   P HYLFNDEN + C II
Sbjct: 187 SASPPPPPMTAMAPPHSYYRWPEPVPYYLQEQQPP---VGNTPSHYLFNDENTEGCVII 242

[Close]

BLAST of CmoCh08G003580 vs. NCBI nr
Match: TYK20998.1 (hypothetical protein E5676_scaffold328G00250 [Cucumis melo var. makuwa])

HSP 1 Score: 94.4 bits (233), Expect = 1.4e-15
Identity = 68/169 (40.24%), Postives = 82/169 (48.52%), Query Frame = 0


Query: 85  APVASAAFRDSVH-QNIPSAASDPHCNKIDWTQ---NCVPG--------SSKVHFNEAAG 144
           AP A++      H +N  S  S+ HC K + T    N   G        S KVH NEAA 
Sbjct: 4   APAATSDNASGHHVRNKNSINSNNHCCKSERTTHYGNSDAGNFSDHRSRSDKVHINEAAA 63

Query: 145 AVPPVDVPYRHRLSLR---------PGSQFGGVGHDASRGFGRPMMEPLPQPLPPAMP-P 204
             PPV +P  +R+ +R         P  Q+G +    S GF   M EP     PP  P  
Sbjct: 64  VNPPVPLPLPNRMFMRPPMSSPRLPPPPQYGDMSFRGSHGFWPGMSEPWSSASPPPPPMT 123

Query: 205 AMPPGNGYYRWSEPPPYYWQQQPPPAPAVAAAPGHYLFNDENVDACKII 232
           AM P + YYRW EP PYY Q+Q PP   V   P HYLFNDEN + C II
Sbjct: 124 AMAPPHSYYRWPEPVPYYLQEQQPP---VGNTPSHYLFNDENTEGCVII 169

[Close]

BLAST of CmoCh08G003580 vs. NCBI nr
Match: KGN45423.2 (hypothetical protein Csa_015802, partial [Cucumis sativus])

HSP 1 Score: 87.8 bits (216), Expect = 1.3e-13
Identity = 63/162 (38.89%), Postives = 79/162 (48.77%), Query Frame = 0


Query: 83  APAPVASAAFRDSVH--QNIPSAASDPHCNKIDWTQNCVPGS------SKVHFNEAAGAV 142
           APAP A+++   S H   +  S  S+ HC K D   +    S       KVH NEAA   
Sbjct: 27  APAPAATSSDNASGHPIHHSHSINSNNHCCKSDGNSDAGNFSDHRSWPDKVHINEAASVN 86

Query: 143 PPVDVPYRHRLSLR---------PGSQFGG-VGHDASRGFGRPMMEPLPQPLPPAMPPAM 202
           PPV +P  +R+ +R         P  Q+G  +G   S GF   M EP   P  P      
Sbjct: 87  PPVALPLHNRMLMRPPMPSLRPPPPPQYGDHMGFRGSHGFWPGMSEPWSSPSHP------ 146

Query: 203 PPGNGYYRWSEPPPYYWQQQPPPAPAVAAAPGHYLFNDENVD 227
           PP + YYRW EP PYY Q+Q PP   V   P HY+FNDEN +
Sbjct: 147 PPPHSYYRWPEPVPYYLQEQQPP---VGNTPNHYVFNDENTE 179

[Close]

BLAST of CmoCh08G003580 vs. NCBI nr
Match: XP_022150205.1 (heavy metal-associated isoprenylated plant protein 42-like [Momordica charantia])

HSP 1 Score: 72.4 bits (176), Expect = 5.7e-09
Identity = 69/221 (31.22%), Postives = 94/221 (42.53%), Query Frame = 0


Query: 1   METSHAPSDRTYVLRVNLKCCNACPNRVKNNLLRLPDVKSVAIDIQKGLVTITANYTFDP 60
           ME   A  D  YVLRVN++CCN CP ++   LLR+  VKSVAID  KGLVT++ +   DP
Sbjct: 1   MENGKASIDANYVLRVNIQCCNECPRKITRRLLRVSGVKSVAIDQDKGLVTVSGD--IDP 60

Query: 61  LTIVRAMSRTGKLARLQPMGYVAPAPVASAAFRDSVHQNIPSAASDPHCNKIDW--TQNC 120
           + +++ + + GK A+L    +    P    +   S          D    + DW     C
Sbjct: 61  VLLLQKIKKMGKEAKL---WFFQQGPGPDCSTEQSKRAESDRNNEDAK-QQFDWHFQHKC 120

Query: 121 VPGSSKVHFNEAAGAVPPVDVPYRHRLSLRPGSQFGGVGHDASRGFGRPMMEPLPQPLPP 180
           VP        E      P   P    L   P +  G     +    G     P  QP+P 
Sbjct: 121 VP--------ETMAMKEPGWGP--RSLPAMPSNVHGYSYSQSIPRLGYRPTWPYQQPVP- 180

Query: 181 AMPPAMPPGNGYYRWSEPP--------PYYWQQQPPPAPAV 212
                + P +GYY  S+PP        PY+  Q PP A  V
Sbjct: 181 --SHRLIPPHGYY--SQPPLPPPLPAYPYFQPQSPPQANPV 200

[Close]

BLAST of CmoCh08G003580 vs. TAIR 10
Match: AT4G23882.1 (Heavy metal transport/detoxification superfamily protein )

HSP 1 Score: 55.1 bits (131), Expect = 8.8e-08
Identity = 56/228 (24.56%), Postives = 95/228 (41.67%), Query Frame = 0


Query: 6   APSDRTYVLRVNLKCCNACPNRVKNNLLRLPDVKSVAIDIQKGLVTITANYTFDPLTIVR 65
           +P  RT VLRV +KCC  C  + K  LL +  V +V  + ++GL+T+T +   +P T++ 
Sbjct: 74  SPPVRTCVLRVGIKCCKGCQTKAKRKLLNVSGVSTVEYNAEQGLLTVTGD--ANPTTLLH 133

Query: 66  AMSRTGKLARLQPMGYVAPAPVASAAFRDSVHQNIPSAASDPHCNKIDWTQNCVPGSSKV 125
            +++ GK A L             +   D+   ++P     P  N+    +      +K 
Sbjct: 134 KLTKWGKKAEL------------VSFLGDNYSSHVPRT---PEQNQNKTMEKKKKKPTKC 193

Query: 126 HFNEAAG-------AVPPVDVP-YRHRLSLRPGSQFGGVGHDASRGFGRPMMEPLPQPLP 185
                 G        + P+ +P +++R     G++ G      +     PM+ P PQ +P
Sbjct: 194 CLLMCFGNKRSKNTKIEPMAIPNWQYR---GVGNENGNARPFINAAMSPPMVYPPPQAVP 253

Query: 186 PAMPPAMPPGNGYYRWSEPPPY----YWQQQPPPAPAVAAAPG---HY 219
               P   P   ++    PPPY     +Q  PP +P     P    HY
Sbjct: 254 GFTTPIPYPPPSFFPGRPPPPYTGAGMFQSAPPQSPPYFPVPNPRLHY 281

[Close]

BLAST of CmoCh08G003580 vs. TAIR 10
Match: AT3G05220.1 (Heavy metal transport/detoxification superfamily protein )

HSP 1 Score: 50.1 bits (118), Expect = 2.8e-06
Identity = 26/67 (38.81%), Postives = 43/67 (64.18%), Query Frame = 0


Query: 10 RTYVLRVNLKCCNACPNRVKNNLLRLPDVKSVAIDIQKGLVTITANYTFDPLTIVRAMSR 69
          +T VL+VN+  C  C ++VK  L ++  V SV  D+++G VT+T N   DP  +V+ +S+
Sbjct: 10 QTCVLKVNVH-CEGCKHKVKKQLQKIEGVYSVKADVEQGRVTVTGN--IDPALLVKKLSK 69

Query: 70 TGKLARL 77
          +GK A +
Sbjct: 70 SGKHAEI 73

[Close]

BLAST of CmoCh08G003580 vs. TAIR 10
Match: AT3G04900.1 (Heavy metal transport/detoxification superfamily protein )

HSP 1 Score: 45.1 bits (105), Expect = 9.2e-05
Identity = 59/237 (24.89%), Postives = 91/237 (38.40%), Query Frame = 0


Query: 13  VLRVNLKCCNACPNRVKNNLLRLPDVKSVAIDIQKGLVTITANYTFDPLTIVRAMSRTGK 72
           +L++NL+CC   P+RVK  L ++  V ++ ID  KGL+ +    T +P  +++A+++ G+
Sbjct: 10  ILKMNLQCCEDFPSRVKKLLRQVKGVYAITIDPVKGLILVCG--TAEPSVLIKAVAKLGQ 69

Query: 73  LARLQPMGYVAPAPVASAAFRDSVHQNIPSAASDPHCNKIDWTQNCVPGSSKVHFNEAAG 132
             +L    Y      A   FR  + +   +   D                      + + 
Sbjct: 70  SPQL--YAYEKDPATAKTRFRTLLKRYATNKTQD----------------------KPSP 129

Query: 133 AVPPVDVPYRHRLSLRPGSQFGGVGHDASRGFGRPMMEPLPQPLPPAMPPAMPPGNGYYR 192
             PPV            G  F        RGFG P   P      PA   ++PP  G   
Sbjct: 130 PAPPVTATTPVETCPAGGETF--------RGFGYP--GPTTMMQMPAF--SLPPPRGLPG 189

Query: 193 WSEPP--PYYWQQQP------PPAP-------AVAAAPGHYLFN---DENVDACKII 232
           W  PP  P    ++P      PPAP        +   P   LFN   D+N   C I+
Sbjct: 190 WLAPPTNPRLKYEEPKVTPRKPPAPYPFDYYENLGFPPSDSLFNYFSDDNPQPCSIM 208

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BLAST of CmoCh08G003580 vs. TAIR 10
Match: AT5G37860.1 (Heavy metal transport/detoxification superfamily protein )

HSP 1 Score: 42.0 bits (97), Expect = 7.8e-04
Identity = 24/67 (35.82%), Postives = 38/67 (56.72%), Query Frame = 0


Query: 10 RTYVLRVNLKCCNACPNRVKNNLLRLPDVKSVAIDIQKGLVTITANYTFDPLTIVRAMSR 69
          +TY L+VN+  C  C  +VK  L ++  V SV ID  +  V +  N   DP  +V+ +++
Sbjct: 10 KTYFLKVNIN-CQGCKMKVKKTLRKIEGVYSVDIDTDQEAVIVRGN--LDPEILVKKLNK 69

Query: 70 TGKLARL 77
           GK A+L
Sbjct: 70 RGKHAQL 73

The following BLAST results are available for this feature:

BLAST of CmoCh08G003580 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
Q0WV37	4.0e-05	38.81	Heavy metal-associated isoprenylated plant protein 34 OS=Arabidopsis thaliana OX...	[more]

BLAST of CmoCh08G003580 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A5A7UTY4	1.7e-22	37.24	Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold...	[more]
A0A0A0K5U2	1.0e-19	34.19	Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_7G392360 PE=4 SV=1	[more]
A0A5D3DBX5	6.8e-16	40.24	Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold...	[more]
A0A6J1D7U6	2.8e-09	31.22	heavy metal-associated isoprenylated plant protein 42-like OS=Momordica charanti...	[more]
A0A022PZY8	9.0e-08	47.22	HMA domain-containing protein OS=Erythranthe guttata OX=4155 GN=MIMGU_mgv11b0181...	[more]

BLAST of CmoCh08G003580 vs. NCBI nr


Match Name	E-value	Identity	Description
KAG6593135.1	4.3e-105	95.48	hypothetical protein SDJN03_12611, partial [Cucurbita argyrosperma subsp. sorori...	[more]
KAA0057596.1	3.5e-22	37.24	hypothetical protein E6C27_scaffold497G00730 [Cucumis melo var. makuwa]	[more]
TYK20998.1	1.4e-15	40.24	hypothetical protein E5676_scaffold328G00250 [Cucumis melo var. makuwa]	[more]
KGN45423.2	1.3e-13	38.89	hypothetical protein Csa_015802, partial [Cucumis sativus]	[more]
XP_022150205.1	5.7e-09	31.22	heavy metal-associated isoprenylated plant protein 42-like [Momordica charantia]	[more]

BLAST of CmoCh08G003580 vs. TAIR 10


Match Name	E-value	Identity	Description
AT4G23882.1	8.8e-08	24.56	Heavy metal transport/detoxification superfamily protein	[more]
AT3G05220.1	2.8e-06	38.81	Heavy metal transport/detoxification superfamily protein	[more]
AT3G04900.1	9.2e-05	24.89	Heavy metal transport/detoxification superfamily protein	[more]
AT5G37860.1	7.8e-04	35.82	Heavy metal transport/detoxification superfamily protein	[more]

InterPro

Analysis Name: InterPro Annotations of Cucurbita moschata (Rifu) v1
Date Performed: 2021-10-25


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR006121	Heavy metal-associated domain, HMA	PFAM	PF00403	HMA	coord: 21..72 e-value: 2.8E-8 score: 34.1
IPR006121	Heavy metal-associated domain, HMA	PROSITE	PS50846	HMA_2	coord: 11..76 score: 11.484415
IPR006121	Heavy metal-associated domain, HMA	CDD	cd00371	HMA	coord: 21..75 e-value: 6.68427E-10 score: 51.8377
None	No IPR available	GENE3D	3.30.70.100		coord: 8..75 e-value: 2.5E-11 score: 45.8
IPR036163	Heavy metal-associated domain superfamily	SUPERFAMILY	55008	HMA, heavy metal-associated domain	coord: 8..76

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
CmoCh08G003580.1	CmoCh08G003580.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
cellular_component	GO:0110165	cellular anatomical entity
molecular_function	GO:0046872	metal ion binding