CmoCh08G003080 (gene) Cucurbita moschata (Rifu) v1
Overview
Sequences
The following sequences are available for this feature:
Legend: polypeptideexonCDSthree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below.ATGGAGGCCCGGAGGCTTGCCATTCTCTGTTCGCATCTCCGTCCAATTAACTCGGGACGTAGTCGAGCAACTCCCTCACATCTTTCCTCTTCGAACTGTGCTTCAGTAGCCAAGAGTGAGCAGCAGCTAATTTATGATCCTCACAAGGGGAGTCTACAAGATGGTTGTGTTTTCTGCAGGATTATACTCGGCGAGGAACCCGCTTTTAAGGTACTAATTATTTTGTTCATTTACAATTTTCGTGTCATCGTTTAAGGTTTGCTTTGTGAGATATATGGGATATTTGAAACCAACATTAAGAGATGACATTTTAACTTGCAGCTCTATGAAGATGATAGTTGCCTTTGTATATTAGATACAAGACCATTGAGTAATGGGTAAGGTATCATTCCTCCAAGATGCAGTACATATGTATATAGTTCTTATGTTTAGCTTAGACTCATTTTGTCTGATGATGTATCTGCGTGATACCATTGAATATGACTTAAAGCTTCTATGCAATGATGTTAGCTGCCTACCACTTTTATCTCGGGTAAGATTATTCATTGTTGCATGTCACTAGGTAGCTAACATCATTGCATTTATGTGATATCCCACATTGGTTGAAGAGGGGAACGAAACATTCTTTATAAGGGTGTGGAAACCTCTCCCTAGCAACACATTTTAAAATCGTGGGGCTAGCGGTGATATTATCGGGTCAAAGCGGACAATATCTACTACGGTGGACTTGGGTTGTTACCGTTGATATTAAAGTTAGACATTGGGCGGTGTGCTAGCGAGGACGTTGGGCCCCAAGGGGGTGGATTGTGAGATCCCACATTTGTTGGAGAGGGGACGAAGCATTCTTTATAAGGGTGTGGGAACCTCTCCCTAGTAGATACGTTTTAAAACTATGAGGCTGACGACGATACGTAAGGGGCCAAAGCGGACAATATCTATTAGTAGTGGGTTTGGGTTGTTATAGTTGGTATTAGAGCTAGACACCGGGCAGTGTGTTAGCGAGGACGTTGGGCCCCAAGGGGAGTGGATTGTGAGATCCCACGTTGGTTGGAGAGGGGGACGAAGCATTCCTTATATGGGTGTGAAAACCTCTCCCTAGCATACGCGTTTTAAAACCGTGAGGCTGACGATGATACGTAACGGGCCAAAGCGGACAATATCTACTAGCGGTGGGCTTGGGTTGTTACAATTAACTTGACCTATATATTTTATTGTATCCACTCCGAAAAGCTTCATCATTATCTTAGATCTTTTGGATACTTCAAAATCTTTTTCCTTAATCGTGCAAACTACGTTGAATCAAGCTCGGCTTGAAACCCTCGAGGTCTATGTCCTATTCCACAGTTTTAAACCGTAGATGTATCGTGGATGTGTTTAGGATACAAGATCCCGTGGCGATGCGCCATTATATAGTTGACCTATTAAATGTGACTTTAGGCTTCCTAATCTAACTTTGTTGATTTGAATTGTTATCCCCTTTAAGGCTCTTCTATTTATTTTCCATATCTCAGGCACTCTCTAATTATACCAAAATCTCATTATTCTTCGTTGGAAGCTACGCCTCCTTCTGTAAGTAACCATCCACTTAAGCTATACGTTCTAAAGTAATTGTCAATATATGTGTATATATATATGCATGTTTGTTTTTGTACATACGTGTGTGAGCTACCCTGTGGCACATACGTGTGTCACAGTGTGGGCGAGTGGGCCGAGACGAGTGTCTCGGGCGACTTCCTTTGAAATGGGTTTTTGAAGGACAGTACCGGACAGCACGGGTGTGCCGGTATTGCGCCCTAGTCCGCGTGTTGGAGGTTGCTACATAAACTCGCTATCTAGTACGGTATCCATAAATGACTCGGCATGGGCATAGGAGGGCCAATGGCTCGATAGAACCCGGATGGATGGATGTTCGGGAAGTCCCAATGAGATGAAAGACACGTGGGCCCATTCTCGATTGCATGACCGAGCGAGTTATGATGGCCGACGACATCCTGAGACTCGGGATGGCGTCAAGACATATGGACCCTGTCGATGGGGATCGAGATGGCAAGATGAGATGCAACGTTGCGTTGAGAGACCTTGGCCCGAGCAAAGCCAAGGTCGAGCCGAATGACTTGGCTTAGTGTAGAGACAAGTCGGATGTGTCGCAGACGATTGAACATGCATGCGCAGGCGGCGTGTGTGGTTGAACAAGCTTGGATTCTGAATATATTTATATATATATTCGGGTTCTCTCATTTGTTTGTCGATTTTCTGATGATCTATGTATTTATTTTGTCTATCTTCTATCTACTTACTGAACAGGTGATAGCTGCAATGTGTTCAAAAGTTCCATTAATTAGCAATGCAATCATGAAGTCAACCGGCAGCGGTATGAACCGACATTTATTTGCTTCATTCTATGTTTCTGTCTTCTCTCCAGTTTCTCAAATGTTTGGTTTTTCACATGTTGGGAATTCAGGCATGTTTGAATTTGAAATTCATGTGGTCGTGTTTCTGGTTTGAAAGACAGAAACATACAATCTTGTCCCCAGTTAACTGTTAATGTTCTGAAATGTGCAAGATTTCGAGCATTTATTTATGCTTAGGAACGTATCTACGATAGTCGTATTGTGCGTTGACTTTTACGAACACTTTTTATGTAACCGCACAAACCCACGATAGAGTCTTGGTTCATGTCTAATTTGATCTATTTCCTATTTTTTAATCTGTGTCGGATGTTTGTTGCTTCAAGTAGTTTCAACTGACATGAAGACAAACTTATATCATGCAGATTCATTCAACTTATTAGTTAACAATGGTGTGGCTGCTGGTCAAGTTATATTCCATGTAAGTTGTAACACAATCTCTATTGTTGTAACCGTCCAAGCCCACCGCTTGTGAATATTGTCTATTTTGGCCTGTTACGTATTACTATCAGCCTCACGGTTTTAAAACGCACCTACTATGGAGAGGGTCTAATCTTACTCTGACCAGTGTCTCGTACTGTCCGATGACTGGCTCTGATATGCTGGGCCACCAAGGGGGGTGAGTTGTGAGGGCCAACGTCGTTTGAAGAGGGAACGAAGTATCCCTTATAAGGGTGTGGAACCTAACAGACGCGTTTTAAAACCATGAGGCTGACGACGATACATAACAGACTAAAACGGATAATATTTGCTAGTAGTGGCCTTGGGCGGTTACACTTACTCTTTTATATGCCCCTTGTAGTAACATAGGTTTTAGTAATGGTGCATCGGTAAAATCCCATAAACATGTGCATTTAAGCTAAATTCTAGTCGACCAATTTAAGCATAGCTCAATTGAGTGAAGAACTACAACCCTGACCAGTATGTCAGAAGTTCAAATCTTCTCCTAGTTTGTTGAACGTTTTAAGTTTCATCTTACATACAACAAATCTTTGCTGATCTTTGTGTAAGCTTGAAACTATCAGACTCACATTCACATAATTCCACGCAAGGCGAGAGATTGCTTATGGGAATCTGAGGTACGTGTTACCATACCTGTTGATATTGTATTTTGAACGATCGAATCATCGACGCACGAACTATAAACACCGAGTTGATGCAGAGTTTGCAGCGAAGAACGCTGAAATTTGACGAGGAGGCGTCGAGGCTAGCAGAAAGCATACAAGAAATGCTACACAACACCAAAGAGAATGATAGCAGCAAGGTTCAAGAATCAAATCTGAGTGGAAATTAGCAATGTAATTAGGGTGGTGTTGCAATTTGAGCTGTATTATTTTGTGTACCATATTCATGTAATGTCAACTACAGTTTATTCTTTTTGAGTACCACAAAATTTGAATACTTAATAAAATGGAAGGCTTGCTTGCTTGTAAAGTTTGGTTGTTGTTTGACGTGGTATATATGTTCGACCAAGAGGATAGAGATTTGAC ATGGAGGCCCGGAGGCTTGCCATTCTCTGTTCGCATCTCCGTCCAATTAACTCGGGACGTAGTCGAGCAACTCCCTCACATCTTTCCTCTTCGAACTGTGCTTCAGTAGCCAAGAGTGAGCAGCAGCTAATTTATGATCCTCACAAGGGGAGTCTACAAGATGGTTGTGTTTTCTGCAGGATTATACTCGGCGAGGAACCCGCTTTTAAGCTCTATGAAGATGATAGTTGCCTTTGTATATTAGATACAAGACCATTGAGTAATGGGCACTCTCTAATTATACCAAAATCTCATTATTCTTCGTTGGAAGCTACGCCTCCTTCTGTGATAGCTGCAATGTGTTCAAAAGTTCCATTAATTAGCAATGCAATCATGAAGTCAACCGGCAGCGATTCATTCAACTTATTAGTTAACAATGGTGTGGCTGCTGGTCAAGTTATATTCCATACTCACATTCACATAATTCCACGCAAGGCGAGAGATTGCTTATGGGAATCTGAGAGTTTGCAGCGAAGAACGCTGAAATTTGACGAGGAGGCGTCGAGGCTAGCAGAAAGCATACAAGAAATGCTACACAACACCAAAGAGAATGATAGCAGCAAGGTTCAAGAATCAAATCTGAGTGGAAATTAGCAATGTAATTAGGGTGGTGTTGCAATTTGAGCTGTATTATTTTGTGTACCATATTCATGTAATGTCAACTACAGTTTATTCTTTTTGAGTACCACAAAATTTGAATACTTAATAAAATGGAAGGCTTGCTTGCTTGTAAAGTTTGGTTGTTGTTTGACGTGGTATATATGTTCGACCAAGAGGATAGAGATTTGAC ATGGAGGCCCGGAGGCTTGCCATTCTCTGTTCGCATCTCCGTCCAATTAACTCGGGACGTAGTCGAGCAACTCCCTCACATCTTTCCTCTTCGAACTGTGCTTCAGTAGCCAAGAGTGAGCAGCAGCTAATTTATGATCCTCACAAGGGGAGTCTACAAGATGGTTGTGTTTTCTGCAGGATTATACTCGGCGAGGAACCCGCTTTTAAGCTCTATGAAGATGATAGTTGCCTTTGTATATTAGATACAAGACCATTGAGTAATGGGCACTCTCTAATTATACCAAAATCTCATTATTCTTCGTTGGAAGCTACGCCTCCTTCTGTGATAGCTGCAATGTGTTCAAAAGTTCCATTAATTAGCAATGCAATCATGAAGTCAACCGGCAGCGATTCATTCAACTTATTAGTTAACAATGGTGTGGCTGCTGGTCAAGTTATATTCCATACTCACATTCACATAATTCCACGCAAGGCGAGAGATTGCTTATGGGAATCTGAGAGTTTGCAGCGAAGAACGCTGAAATTTGACGAGGAGGCGTCGAGGCTAGCAGAAAGCATACAAGAAATGCTACACAACACCAAAGAGAATGATAGCAGCAAGGTTCAAGAATCAAATCTGAGTGGAAATTAG MEARRLAILCSHLRPINSGRSRATPSHLSSSNCASVAKSEQQLIYDPHKGSLQDGCVFCRIILGEEPAFKLYEDDSCLCILDTRPLSNGHSLIIPKSHYSSLEATPPSVIAAMCSKVPLISNAIMKSTGSDSFNLLVNNGVAAGQVIFHTHIHIIPRKARDCLWESESLQRRTLKFDEEASRLAESIQEMLHNTKENDSSKVQESNLSGN Homology
BLAST of CmoCh08G003080 vs. ExPASy Swiss-Prot
Match: F4K1R2 (Adenylylsulfatase HINT3 OS=Arabidopsis thaliana OX=3702 GN=HINT3 PE=1 SV=1) HSP 1 Score: 246.1 bits (627), Expect = 3.5e-64 Identity = 127/196 (64.80%), Postives = 149/196 (76.02%), Query Frame = 0
BLAST of CmoCh08G003080 vs. ExPASy Swiss-Prot
Match: P9WML0 (Uncharacterized HIT-like protein MT1300 OS=Mycobacterium tuberculosis (strain CDC 1551 / Oshkosh) OX=83331 GN=MT1300 PE=4 SV=1) HSP 1 Score: 100.5 bits (249), Expect = 2.4e-20 Identity = 47/117 (40.17%), Postives = 71/117 (60.68%), Query Frame = 0
BLAST of CmoCh08G003080 vs. ExPASy Swiss-Prot
Match: P9WML1 (Uncharacterized HIT-like protein Rv1262c OS=Mycobacterium tuberculosis (strain ATCC 25618 / H37Rv) OX=83332 GN=Rv1262c PE=4 SV=1) HSP 1 Score: 100.5 bits (249), Expect = 2.4e-20 Identity = 47/117 (40.17%), Postives = 71/117 (60.68%), Query Frame = 0
BLAST of CmoCh08G003080 vs. ExPASy Swiss-Prot
Match: Q58276 (Uncharacterized HIT-like protein MJ0866 OS=Methanocaldococcus jannaschii (strain ATCC 43067 / DSM 2661 / JAL-1 / JCM 10045 / NBRC 100440) OX=243232 GN=MJ0866 PE=4 SV=2) HSP 1 Score: 92.4 bits (228), Expect = 6.4e-18 Identity = 43/108 (39.81%), Postives = 62/108 (57.41%), Query Frame = 0
BLAST of CmoCh08G003080 vs. ExPASy Swiss-Prot
Match: P95937 (Uncharacterized HIT-like protein SSO2163 OS=Saccharolobus solfataricus (strain ATCC 35092 / DSM 1617 / JCM 11322 / P2) OX=273057 GN=SSO2163 PE=4 SV=1) HSP 1 Score: 92.4 bits (228), Expect = 6.4e-18 Identity = 44/142 (30.99%), Postives = 80/142 (56.34%), Query Frame = 0
BLAST of CmoCh08G003080 vs. ExPASy TrEMBL
Match: A0A6J1HAT1 (adenylylsulfatase HINT3 OS=Cucurbita moschata OX=3662 GN=LOC111461112 PE=4 SV=1) HSP 1 Score: 415.6 bits (1067), Expect = 1.2e-112 Identity = 210/210 (100.00%), Postives = 210/210 (100.00%), Query Frame = 0
BLAST of CmoCh08G003080 vs. ExPASy TrEMBL
Match: A0A6J1KVS3 (adenylylsulfatase HINT3 isoform X1 OS=Cucurbita maxima OX=3661 GN=LOC111497645 PE=4 SV=1) HSP 1 Score: 401.7 bits (1031), Expect = 1.8e-108 Identity = 205/210 (97.62%), Postives = 207/210 (98.57%), Query Frame = 0
BLAST of CmoCh08G003080 vs. ExPASy TrEMBL
Match: A0A1S3BRW7 (uncharacterized HIT-like protein MT1300 isoform X3 OS=Cucumis melo OX=3656 GN=LOC103492627 PE=4 SV=1) HSP 1 Score: 341.3 bits (874), Expect = 2.9e-90 Identity = 178/210 (84.76%), Postives = 191/210 (90.95%), Query Frame = 0
BLAST of CmoCh08G003080 vs. ExPASy TrEMBL
Match: A0A6J1DNX8 (adenylylsulfatase HINT3 OS=Momordica charantia OX=3673 GN=LOC111022849 PE=4 SV=1) HSP 1 Score: 341.3 bits (874), Expect = 2.9e-90 Identity = 179/210 (85.24%), Postives = 188/210 (89.52%), Query Frame = 0
BLAST of CmoCh08G003080 vs. ExPASy TrEMBL
Match: A0A1S4DYN9 (uncharacterized HIT-like protein MT1300 isoform X2 OS=Cucumis melo OX=3656 GN=LOC103492627 PE=4 SV=1) HSP 1 Score: 341.3 bits (874), Expect = 2.9e-90 Identity = 178/210 (84.76%), Postives = 191/210 (90.95%), Query Frame = 0
BLAST of CmoCh08G003080 vs. NCBI nr
Match: XP_022960364.1 (adenylylsulfatase HINT3 [Cucurbita moschata]) HSP 1 Score: 415.6 bits (1067), Expect = 2.5e-112 Identity = 210/210 (100.00%), Postives = 210/210 (100.00%), Query Frame = 0
BLAST of CmoCh08G003080 vs. NCBI nr
Match: XP_023514757.1 (adenylylsulfatase HINT3 [Cucurbita pepo subsp. pepo]) HSP 1 Score: 409.5 bits (1051), Expect = 1.8e-110 Identity = 207/210 (98.57%), Postives = 209/210 (99.52%), Query Frame = 0
BLAST of CmoCh08G003080 vs. NCBI nr
Match: XP_023004259.1 (adenylylsulfatase HINT3 isoform X1 [Cucurbita maxima]) HSP 1 Score: 401.7 bits (1031), Expect = 3.8e-108 Identity = 205/210 (97.62%), Postives = 207/210 (98.57%), Query Frame = 0
BLAST of CmoCh08G003080 vs. NCBI nr
Match: XP_008451285.1 (PREDICTED: uncharacterized HIT-like protein MT1300 isoform X3 [Cucumis melo] >XP_008451286.1 PREDICTED: uncharacterized HIT-like protein MT1300 isoform X3 [Cucumis melo]) HSP 1 Score: 341.3 bits (874), Expect = 6.0e-90 Identity = 178/210 (84.76%), Postives = 191/210 (90.95%), Query Frame = 0
BLAST of CmoCh08G003080 vs. NCBI nr
Match: XP_016901093.1 (PREDICTED: uncharacterized HIT-like protein MT1300 isoform X1 [Cucumis melo]) HSP 1 Score: 341.3 bits (874), Expect = 6.0e-90 Identity = 178/210 (84.76%), Postives = 191/210 (90.95%), Query Frame = 0
BLAST of CmoCh08G003080 vs. TAIR 10
Match: AT5G48545.1 (histidine triad nucleotide-binding 3 ) HSP 1 Score: 246.1 bits (627), Expect = 2.5e-65 Identity = 127/196 (64.80%), Postives = 149/196 (76.02%), Query Frame = 0
BLAST of CmoCh08G003080 vs. TAIR 10
Match: AT1G31160.1 (HISTIDINE TRIAD NUCLEOTIDE-BINDING 2 ) HSP 1 Score: 55.1 bits (131), Expect = 8.0e-08 Identity = 31/101 (30.69%), Postives = 51/101 (50.50%), Query Frame = 0
BLAST of CmoCh08G003080 vs. TAIR 10
Match: AT5G58240.2 (FRAGILE HISTIDINE TRIAD ) HSP 1 Score: 48.1 bits (113), Expect = 9.8e-06 Identity = 39/137 (28.47%), Postives = 60/137 (43.80%), Query Frame = 0
BLAST of CmoCh08G003080 vs. TAIR 10
Match: AT5G58240.1 (FRAGILE HISTIDINE TRIAD ) HSP 1 Score: 48.1 bits (113), Expect = 9.8e-06 Identity = 39/137 (28.47%), Postives = 60/137 (43.80%), Query Frame = 0
The following BLAST results are available for this feature:
InterPro
Analysis Name: InterPro Annotations of Cucurbita moschata (Rifu) v1
Date Performed: 2021-10-25
Relationships
The following mRNA feature(s) are a part of this gene:
GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
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